Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All ACTB 0 genome.wustl.edu 37 7 5567112 5567112 + RNA SNP C C T TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 7 5567112 5567112 C T SNP ACTB ENST00000464611 human ensembl 69_37n -1 known rna NULL NULL 0.998 - - - no_errors ACTB HGNC ENSG00000075624 43 0 0.00 33 4 10.81 - - - ANKRD20A4 0 genome.wustl.edu 37 9 69390020 69390020 + Missense_Mutation SNP T T A TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 9 69390020 69390020 T A SNP ANKRD20A4 ENST00000357336 human ensembl 69_37n +1 known missense c.574 p.S192T 0.002 superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt - no_errors ANKRD20A4 HGNC ENSG00000172014 26 0 0.00 23 8 25.81 - - - ANKRD49 0 genome.wustl.edu 37 11 94231847 94231847 + RNA SNP G G A TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 11 94231847 94231847 G A SNP ANKRD49 ENST00000538535 human ensembl 69_37n +1 known rna NULL NULL 0.932 - - - no_errors ANKRD49 HGNC ENSG00000168876 19 0 0.00 15 5 25.00 - - - C12orf55 0 genome.wustl.edu 37 12 97023937 97023937 + Missense_Mutation SNP A A C TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 12 97023937 97023937 A C SNP C12orf55 ENST00000550977 human ensembl 69_37n +1 putative missense c.409 p.K137Q 0.000 NULL NULL - no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region C12orf55 HGNC ENSG00000188596 45 0 0.00 39 6 13.33 - - - C1S 0 genome.wustl.edu 37 12 7169068 7169068 + RNA SNP C C T TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 12 7169068 7169068 C T SNP C1S ENST00000541647 human ensembl 69_37n +1 known rna NULL NULL 0.000 - - - no_errors C1S HGNC ENSG00000182326 36 0 0.00 34 7 17.07 - - - CASP2 0 genome.wustl.edu 37 7 142997325 142997325 + Missense_Mutation SNP A A G TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 7 142997325 142997325 A G SNP CASP2 ENST00000310447 human ensembl 69_37n +1 known missense c.905 p.N302S 1.000 pfam_Pept_C14_cat,smart_Pept_C14_p45_core,pirsf_Caspase_IL-1_beta,pfscan_Pept_C14_ICE_p20 pfam_Pept_C14_cat,pfam_CARD,superfamily_DEATH-like,smart_CARD,smart_Pept_C14_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14_p45_core - no_errors CASP2 HGNC ENSG00000106144 49 0 0.00 45 5 10.00 - - - CBX8 0 genome.wustl.edu 37 17 77772068 77772068 + Silent SNP G G A TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 17 77772068 77772068 G A SNP CBX8 ENST00000413392 human ensembl 69_37n -1 putative silent c.12 p.A4 0.003 smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow - no_stop_codon CBX8 HGNC ENSG00000141570 19 0 0.00 10 3 23.08 - - - CCT6P3 0 genome.wustl.edu 37 7 64498782 64498782 + RNA SNP G G T TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 7 64498782 64498782 G T SNP CCT6P3 ENST00000426828 human ensembl 69_37n +1 known rna NULL NULL 1.000 - - - no_errors CCT6P3 HGNC ENSG00000234585 39 0 0.00 32 5 13.51 - - - CDO1 0 genome.wustl.edu 37 5 115152249 115152249 + RNA SNP G G A TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 5 115152249 115152249 G A SNP CDO1 ENST00000504613 human ensembl 69_37n -1 putative rna NULL NULL 0.001 - - - no_errors CDO1 HGNC ENSG00000129596 22 0 0.00 22 4 15.38 - - - CTBP1-AS1 0 genome.wustl.edu 37 4 1244267 1244267 + RNA SNP A A G TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 4 1244267 1244267 A G SNP CTBP1-AS1 ENST00000578730 human ensembl 69_37n +1 known rna NULL NULL 0.326 - - - no_errors CTBP1-AS1 HGNC ENSG00000196810 42 0 0.00 51 7 12.07 - - - CYP2C18 0 genome.wustl.edu 37 10 96495284 96495284 + RNA SNP G G A TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 10 96495284 96495284 G A SNP CYP2C18 ENST00000476630 human ensembl 69_37n +1 known rna NULL NULL 0.000 - - - no_errors CYP2C18 HGNC ENSG00000108242 44 0 0.00 52 6 10.34 - - - DTYMK 0 genome.wustl.edu 37 2 242615462 242615462 + RNA SNP T T C TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 2 242615462 242615462 T C SNP DTYMK ENST00000472618 human ensembl 69_37n -1 putative rna NULL NULL 0.000 - - - no_errors DTYMK HGNC ENSG00000168393 9 0 0.00 15 12 44.44 - - - ESRP1 0 genome.wustl.edu 37 8 95718733 95718733 + RNA SNP A A T TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 8 95718733 95718733 A T SNP ESRP1 ENST00000523347 human ensembl 69_37n +1 known rna NULL NULL 0.000 - - - no_errors ESRP1 HGNC ENSG00000104413 17 0 0.00 17 5 22.73 - - - FER1L6 0 genome.wustl.edu 37 8 125047692 125047692 + Missense_Mutation SNP C C A TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 8 125047692 125047692 C A SNP FER1L6 ENST00000399018 human ensembl 69_37n +1 known missense c.2461 p.Q821K 0.996 superfamily_C2_Ca/lipid-bd_dom_CaLB,pfscan_C2_membr_targeting pfam_C2_Ca-dep,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_ABC_transptrTM_dom_typ1,smart_C2_Ca-dep,pfscan_C2_membr_targeting - no_errors FER1L6 HGNC ENSG00000214814 83 0 0.00 67 10 12.99 - - - GPR63 0 genome.wustl.edu 37 6 97247453 97247453 + Missense_Mutation SNP G G C TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 6 97247453 97247453 G C SNP GPR63 ENST00000229955 human ensembl 69_37n -1 known missense c.155 p.A52G 0.998 NULL pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn - no_errors GPR63 HGNC ENSG00000112218 75 0 0.00 57 12 17.39 - - - KIAA1211 0 genome.wustl.edu 37 4 57180592 57180592 + Frame_Shift_Del DEL T T - TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 4 57180592 57180592 T - DEL KIAA1211 ENST00000504228 human ensembl 69_37n +1 known frame_shift_del c.924 p.E309fs 0.000 NULL NULL - no_errors KIAA1211 HGNC ENSG00000109265 10 0 0.00 15 6 28.57 - - - KIR2DL2 0 genome.wustl.edu 37 GL000209.1 88540 88540 + Silent SNP A A G TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de GL000209.1 88540 88540 A G SNP KIR2DL2 ENST00000391731 human ensembl 69_37n +1 known silent c.300 p.P100 NULL smart_Ig_sub pfam_Immunoglobulin,smart_Ig_sub - no_errors KIR2DL2 HGNC ENSG00000215764 54 0 0.00 32 4 11.11 - - - KIR2DL3 0 genome.wustl.edu 37 19 55275387 55275387 + Missense_Mutation SNP A A G TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 19 55275387 55275387 A G SNP KIR2DL3 ENST00000434419 human ensembl 69_37n +1 known missense c.709 p.K237E 0.051 NULL pfam_Immunoglobulin,smart_Ig_sub - no_errors KIR2DL3 HGNC ENSG00000243772 80 0 0.00 84 11 11.58 - - - LINC00303 0 genome.wustl.edu 37 1 204006538 204006538 + RNA SNP T T C TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 1 204006538 204006538 T C SNP LINC00303 ENST00000367207 human ensembl 69_37n -1 known rna NULL NULL 0.001 - - - no_errors LINC00303 HGNC ENSG00000176754 80 0 0.00 38 6 13.64 - - - MYBPHL 0 genome.wustl.edu 37 1 109839483 109839483 + Missense_Mutation SNP G G A TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 1 109839483 109839483 G A SNP MYBPHL ENST00000357155 human ensembl 69_37n -1 known missense c.652 p.R218C 0.994 pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3 pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like - no_errors MYBPHL HGNC ENSG00000221986 124 0 0.00 95 12 11.21 - - - NLGN3 0 genome.wustl.edu 37 X 70375090 70375090 + Missense_Mutation SNP G G A TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de X 70375090 70375090 G A SNP NLGN3 ENST00000358741 human ensembl 69_37n +1 known missense c.604 p.V202I 1.000 pfam_CarbesteraseB pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin - no_errors NLGN3 HGNC ENSG00000196338 83 0 0.00 52 6 10.34 - - - PIK3CA 0 genome.wustl.edu 37 3 178936091 178936091 + Missense_Mutation SNP G G A TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 3 178936091 178936091 G A SNP PIK3CA ENST00000263967 human ensembl 69_37n +1 known missense c.1633 p.E545K 1.000 pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom - no_errors PIK3CA HGNC ENSG00000121879 71 0 0.00 58 10 14.71 - - - PLA2G6 0 genome.wustl.edu 37 22 38512402 38512402 + Missense_Mutation SNP G G A TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 22 38512402 38512402 G A SNP PLA2G6 ENST00000454670 human ensembl 69_37n -1 known missense c.403 p.H135Y 0.050 NULL pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase - no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region PLA2G6 HGNC ENSG00000184381 44 0 0.00 35 4 10.26 - - - POLK 0 genome.wustl.edu 37 5 74894333 74894333 + RNA SNP G G C TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 5 74894333 74894333 G C SNP POLK ENST00000506928 human ensembl 69_37n +1 known rna NULL NULL 0.859 - - - no_errors POLK HGNC ENSG00000122008 22 0 0.00 33 7 17.50 - - - SDHAP1 0 genome.wustl.edu 37 3 195692347 195692347 + RNA SNP G G A TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 3 195692347 195692347 G A SNP SDHAP1 ENST00000354559 human ensembl 69_37n -1 known rna NULL NULL 1.000 - - - no_errors SDHAP1 HGNC ENSG00000185485 59 0 0.00 53 7 11.67 - - - SKIV2L 0 genome.wustl.edu 37 6 31928496 31928496 + Nonsense_Mutation SNP G G T TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 6 31928496 31928496 G T SNP SKIV2L ENST00000375394 human ensembl 69_37n +1 known nonsense c.523 p.E175* 1.000 pirsf_RNA_helicase_ATP-dep_SK12/DOB1 pfam_DSH_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pirsf_RNA_helicase_ATP-dep_SK12/DOB1,pfscan_Helicase_ATP-bd,pfscan_Helicase_C - no_errors SKIV2L HGNC ENSG00000204351 29 0 0.00 35 4 10.26 - - - TAS2R43 0 genome.wustl.edu 37 12 11244166 11244166 + Silent SNP G G C TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 12 11244166 11244166 G C SNP TAS2R43 ENST00000531678 human ensembl 69_37n -1 known silent c.663 p.T221 0.185 pfam_TAS2_rcpt pfam_TAS2_rcpt - no_errors TAS2R43 HGNC ENSG00000255374 18 0 0.00 19 6 24.00 - - - TLR1 0 genome.wustl.edu 37 4 38798935 38798935 + Silent SNP C C T TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 4 38798935 38798935 C T SNP TLR1 ENST00000308979 human ensembl 69_37n -1 known silent c.1518 p.S506 0.002 pirsf_Toll-like_receptor pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,prints_IL1_rcpt_1,pfscan_TIR_dom - no_errors TLR1 HGNC ENSG00000174125 120 0 0.00 126 14 10.00 - - - TMEM53 0 genome.wustl.edu 37 1 45119965 45119965 + RNA SNP C C T TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 1 45119965 45119965 C T SNP TMEM53 ENST00000468117 human ensembl 69_37n -1 known rna NULL NULL 0.000 - - - no_errors TMEM53 HGNC ENSG00000126106 10 0 0.00 9 4 30.77 - - - TPM2 0 genome.wustl.edu 37 9 35689839 35689839 + RNA SNP C C T TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 9 35689839 35689839 C T SNP TPM2 ENST00000471212 human ensembl 69_37n -1 known rna NULL NULL 0.000 - - - no_errors TPM2 HGNC ENSG00000198467 129 0 0.00 87 11 11.22 - - - TRDMT1 0 genome.wustl.edu 37 10 17194026 17194026 + RNA SNP A A G TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 10 17194026 17194026 A G SNP TRDMT1 ENST00000452380 human ensembl 69_37n -1 known rna NULL NULL 0.001 - - - no_errors TRDMT1 HGNC ENSG00000107614 57 0 0.00 46 8 14.81 - - - UAP1 0 genome.wustl.edu 37 1 162557578 162557578 + RNA SNP C C T TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 1 162557578 162557578 C T SNP UAP1 ENST00000474728 human ensembl 69_37n +1 known rna NULL NULL 0.000 - - - no_errors UAP1 HGNC ENSG00000117143 11 0 0.00 20 5 20.00 - - - ULK1 0 genome.wustl.edu 37 12 132399950 132399950 + Missense_Mutation SNP C C T TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 12 132399950 132399950 C T SNP ULK1 ENST00000538444 human ensembl 69_37n +1 putative missense c.137 p.A46V 0.999 NULL NULL - no_errors ULK1 HGNC ENSG00000177169 57 0 0.00 36 7 16.28 - - - ZNF417 0 genome.wustl.edu 37 19 58420699 58420699 + Missense_Mutation SNP C C A TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 19 58420699 58420699 C A SNP ZNF417 ENST00000312026 human ensembl 69_37n -1 known missense c.947 p.R316L 0.000 pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF417 HGNC ENSG00000173480 194 0 0.00 175 20 10.20 - - - ZNF518A 0 genome.wustl.edu 37 10 97922999 97922999 + RNA SNP T T A TCGA-A2-A4RY-01A-31D-A25Q-09 TCGA-A2-A4RY-10A-01D-A25Q-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 4c400e78-37d6-45e8-a080-08edaa1fd748 89b85d2b-73e8-4256-96f0-0cd90ad601de 10 97922999 97922999 T A SNP ZNF518A ENST00000534948 human ensembl 69_37n +1 known rna NULL NULL 0.008 - - - no_errors ZNF518A HGNC ENSG00000177853 51 0 0.00 50 7 12.28 - - -