Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All ANKRD13D 0 genome.wustl.edu 37 11 67066581 67066581 + Missense_Mutation SNP G G A TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 11 67066581 67066581 G A SNP ANKRD13D ENST00000511455 human ensembl 69_37n +1 known missense c.784 p.G262S 1.000 pfam_ANKRD13 pfam_ANKRD13,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ubiquitin-int_motif,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Ubiquitin-int_motif - no_errors ANKRD13D HGNC ENSG00000172932 147 0 0.00 183 100 35.34 - - - AQP12A 0 genome.wustl.edu 37 2 241633892 241633892 + Missense_Mutation SNP C C A TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 2 241633892 241633892 C A SNP AQP12A ENST00000429564 human ensembl 69_37n +1 known missense c.650 p.A217D 0.698 pfam_MIP,superfamily_Aquaporin-like,pirsf_Aquaporin_11/12 pfam_MIP,superfamily_Aquaporin-like,pirsf_Aquaporin_11/12,prints_Aquaporin_12,prints_MIP - no_errors AQP12A HGNC ENSG00000184945 8 0 0.00 35 18 33.96 - - - C14orf37 0 genome.wustl.edu 37 14 58605863 58605863 + Missense_Mutation SNP C C T TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 14 58605863 58605863 C T SNP C14orf37 ENST00000267485 human ensembl 69_37n -1 known missense c.214 p.E72K 0.026 NULL NULL - no_errors C14orf37 HGNC ENSG00000139971 202 0 0.00 134 135 50.19 - - - C20orf26 0 genome.wustl.edu 37 20 20150064 20150064 + Missense_Mutation SNP G G A TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 20 20150064 20150064 G A SNP C20orf26 ENST00000245957 human ensembl 69_37n +1 known missense c.1345 p.E449K 0.001 NULL superfamily_Acyl_CoA_acyltransferase - no_errors C20orf26 HGNC ENSG00000089101 150 0 0.00 131 114 46.53 - - - COL4A1 0 genome.wustl.edu 37 13 110826988 110826988 + Missense_Mutation SNP C C T TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 13 110826988 110826988 C T SNP COL4A1 ENST00000375820 human ensembl 69_37n -1 known missense c.3307 p.G1103R 1.000 pfam_Collagen pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC - no_errors COL4A1 HGNC ENSG00000187498 87 0 0.00 104 54 34.18 - - - CROCCP2 0 genome.wustl.edu 37 1 16945358 16945358 + RNA SNP G G C TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 1 16945358 16945358 G C SNP CROCCP2 ENST00000412962 human ensembl 69_37n -1 known rna NULL NULL 0.110 - - - no_errors CROCCP2 HGNC ENSG00000215908 9 0 0.00 34 7 17.07 - - - CSH1 0 genome.wustl.edu 37 17 61972940 61972940 + Missense_Mutation SNP G G A TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 17 61972940 61972940 G A SNP CSH1 ENST00000316193 human ensembl 69_37n -1 known missense c.349 p.R117W 1.000 pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin - no_errors CSH1 HGNC ENSG00000136488 17 0 0.00 28 19 40.43 - - - DHX58 0 genome.wustl.edu 37 17 40257115 40257115 + Missense_Mutation SNP G G A TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 17 40257115 40257115 G A SNP DHX58 ENST00000251642 human ensembl 69_37n -1 known missense c.1322 p.A441V 0.986 pfam_Helicase_C,smart_Helicase_C,pfscan_Helicase_C pfam_RIG-I_C-RD,pfam_Helicase/UvrB_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C - no_errors DHX58 HGNC ENSG00000108771 39 0 0.00 22 34 60.71 - - - DZIP3 0 genome.wustl.edu 37 3 108335487 108335487 + Missense_Mutation SNP C C G TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 3 108335487 108335487 C G SNP DZIP3 ENST00000361582 human ensembl 69_37n +1 known missense c.358 p.Q120E 1.000 NULL pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING - no_errors DZIP3 HGNC ENSG00000198919 140 0 0.00 108 64 37.21 - - - FLG 0 genome.wustl.edu 37 1 152285017 152285017 + Missense_Mutation SNP C C T TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 1 152285017 152285017 C T SNP FLG ENST00000368799 human ensembl 69_37n -1 known missense c.2345 p.R782Q 0.000 NULL pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2,prints_Filaggrin - no_errors FLG HGNC ENSG00000143631 237 0 0.00 292 241 44.96 - - - GATA3 0 genome.wustl.edu 37 10 8111433 8111434 + Splice_Site DEL CA CA - TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 CA CA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 10 8111433 8111434 CA - DEL GATA3 ENST00000379328 human ensembl 69_37n +1 known splice_site_del c.925-3_925-2 e4-2 1.000:1.000 - - - no_errors GATA3 HGNC ENSG00000107485 74 0 0 176 50 22.12 - - - GLYCTK 0 genome.wustl.edu 37 3 52326415 52326415 + Missense_Mutation SNP G G A TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 3 52326415 52326415 G A SNP GLYCTK ENST00000436784 human ensembl 69_37n +1 known missense c.845 p.R282H 0.081 NULL pfam_MOFRL - no_errors GLYCTK HGNC ENSG00000168237 47 0 0.00 79 46 36.80 - - - GPR128 0 genome.wustl.edu 37 3 100378672 100378672 + Missense_Mutation SNP A A G TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 3 100378672 100378672 A G SNP GPR128 ENST00000273352 human ensembl 69_37n +1 known missense c.1964 p.N655S 0.894 pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like pfam_GPCR_2_secretin-like,pfam_GPS_dom,smart_GPS_dom,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_GPCR_2-like - no_errors GPR128 HGNC ENSG00000144820 187 0 0.00 192 123 39.05 - - - KIAA1239 0 genome.wustl.edu 37 4 37446793 37446793 + Missense_Mutation SNP C C G TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 4 37446793 37446793 C G SNP KIAA1239 ENST00000309447 human ensembl 69_37n +1 known missense c.3183 p.I1061M 1.000 superfamily_WD40_repeat_dom superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom - no_errors KIAA1239 HGNC ENSG00000174145 98 0 0.00 200 91 31.27 - - - KIAA1324L 0 genome.wustl.edu 37 7 86537023 86537023 + Missense_Mutation SNP G G A TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 7 86537023 86537023 G A SNP KIAA1324L ENST00000450689 human ensembl 69_37n -1 known missense c.2521 p.P841S 1.000 superfamily_Man6P_isomerase_rcpt-bd_dom superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_Growth_fac_rcpt - no_errors KIAA1324L HGNC ENSG00000164659 194 0 0.00 176 81 31.52 - - - MAP4K1 0 genome.wustl.edu 37 19 39098654 39098654 + Missense_Mutation SNP C C T TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 19 39098654 39098654 C T SNP MAP4K1 ENST00000591517 human ensembl 69_37n -1 known missense c.1085 p.R362Q 0.001 superfamily_Kinase-like_dom pfam_Prot_kinase_cat_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom - no_errors MAP4K1 HGNC ENSG00000104814 70 0 0.00 80 48 37.21 - - - MIR616 0 genome.wustl.edu 37 12 57913024 57913024 + RNA SNP G G C TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 12 57913024 57913024 G C SNP MIR616 ENST00000385293 human ensembl 69_37n -1 known rna NULL NULL 0.001 - - - no_errors MIR616 HGNC ENSG00000208028 90 0 0.00 121 61 33.33 - - - MMP14 0 genome.wustl.edu 37 14 23314527 23314527 + Missense_Mutation SNP G G A TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 14 23314527 23314527 G A SNP MMP14 ENST00000311852 human ensembl 69_37n +1 known missense c.1369 p.E457K 1.000 pirsf_Pept_M10A_matrix_strom,pfam_Hemopexin/matrixin_repeat,superfamily_Hemopexin/matrixin,smart_Hemopexin/matrixin_repeat pirsf_Pept_M10A_matrix_strom,pfam_Hemopexin/matrixin_repeat,pfam_Pept_M10_metallopeptidase,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin/matrixin,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin/matrixin_repeat,prints_Pept_M10A_matrixin - no_errors MMP14 HGNC ENSG00000157227 52 0 0.00 60 29 32.58 - - - MPO 0 genome.wustl.edu 37 17 56355208 56355208 + Missense_Mutation SNP C C T TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 17 56355208 56355208 C T SNP MPO ENST00000340482 human ensembl 69_37n -1 known missense c.1280 p.R427H 0.005 pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr - no_errors MPO HGNC ENSG00000005381 60 0 0.00 81 44 34.65 - - - MUC12 0 genome.wustl.edu 37 7 100647276 100647276 + Missense_Mutation SNP C C A TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 7 100647276 100647276 C A SNP MUC12 ENST00000379442 human ensembl 69_37n +1 known missense c.13861 p.P4621T 0.001 NULL pfam_SEA - no_errors MUC12 HGNC ENSG00000205277 42 0 0.00 125 21 14.29 - - - MUC20 0 genome.wustl.edu 37 3 195346587 195346587 + Missense_Mutation SNP G G A TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 3 195346587 195346587 G A SNP MUC20 ENST00000381954 human ensembl 69_37n +1 known missense c.889 p.A297T 0.009 NULL NULL - no_errors MUC20 HGNC ENSG00000176945 68 0 0.00 132 42 24.14 - - - ODZ3 0 genome.wustl.edu 37 4 183713590 183713590 + Missense_Mutation SNP C C T TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 4 183713590 183713590 C T SNP ODZ3 ENST00000406950 human ensembl 69_37n +1 known missense c.5765 p.A1922V 1.000 NULL pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c_dom,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core - no_errors ODZ3 HGNC ENSG00000218336 23 0 0.00 67 32 32.32 - - - PDZD7 0 genome.wustl.edu 37 10 102777873 102777873 + Missense_Mutation SNP C C T TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 10 102777873 102777873 C T SNP PDZD7 ENST00000370215 human ensembl 69_37n -1 known missense c.1505 p.R502H 0.004 NULL pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ - no_errors PDZD7 HGNC ENSG00000186862 115 0 0.00 93 42 31.11 - - - PRB2 0 genome.wustl.edu 37 12 11546473 11546473 + Missense_Mutation SNP G G A TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 12 11546473 11546473 G A SNP PRB2 ENST00000389362 human ensembl 69_37n -1 known missense c.539 p.P180L 0.665 NULL NULL - no_errors PRB2 HGNC ENSG00000121335 338 0 0.00 355 167 31.87 - - - SAT1 0 genome.wustl.edu 37 X 23803899 23803899 + Missense_Mutation SNP C C A TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc X 23803899 23803899 C A SNP SAT1 ENST00000379270 human ensembl 69_37n +1 known missense c.442 p.L148M 1.000 superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom - no_errors SAT1 HGNC ENSG00000130066 125 0 0.00 93 20 17.70 - - - SCN7A 0 genome.wustl.edu 37 2 167330310 167330310 + Missense_Mutation SNP C C G TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 2 167330310 167330310 C G SNP SCN7A ENST00000409855 human ensembl 69_37n -1 known missense c.442 p.E148Q 0.963 pfam_Ion_trans_dom pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu - no_errors SCN7A HGNC ENSG00000136546 68 0 0.00 9 7 43.75 - - - SLFN11 0 genome.wustl.edu 37 17 33689955 33689955 + Missense_Mutation SNP C C T TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 17 33689955 33689955 C T SNP SLFN11 ENST00000308377 human ensembl 69_37n -1 known missense c.872 p.R291H 0.000 pfam_ATPase_AAA-4 pfam_ATPase_AAA-4,pfam_DUF2075 - no_errors SLFN11 HGNC ENSG00000172716 421 0 0.00 218 243 52.60 - - - SNX25 0 genome.wustl.edu 37 4 186188240 186188240 + Missense_Mutation SNP C C T TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 4 186188240 186188240 C T SNP SNX25 ENST00000264694 human ensembl 69_37n +1 known missense c.530 p.A177V 1.000 NULL pfam_Phox_assoc,pfam_Sorting_nexin_C,pfam_Regulat_G_prot_signal,pfam_Phox,superfamily_Regulat_G_prot_signal_superfam,superfamily_Phox,smart_PX_assoc_Snx13,smart_Regulat_G_prot_signal,smart_Phox,pfscan_Phox,pfscan_Phox_assoc,pfscan_Regulat_G_prot_signal - no_errors SNX25 HGNC ENSG00000109762 110 0 0.00 94 43 31.39 - - - STX19 0 genome.wustl.edu 37 3 93733513 93733513 + Missense_Mutation SNP C C T TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 3 93733513 93733513 C T SNP STX19 ENST00000315099 human ensembl 69_37n -1 known missense c.601 p.E201K 1.000 superfamily_t-SNARE pfam_T_SNARE_dom,pfam_Syntaxin_N,superfamily_t-SNARE,smart_T_SNARE_dom,pfscan_T_SNARE_dom - no_errors STX19 HGNC ENSG00000178750 147 0 0.00 158 81 33.89 - - - TGFBR2 0 genome.wustl.edu 37 3 30729932 30729932 + Missense_Mutation SNP G G A TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 3 30729932 30729932 G A SNP TGFBR2 ENST00000359013 human ensembl 69_37n +1 known missense c.1528 p.E510K 1.000 pirsf_Transform_growth_fac-b_typ-2,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Activin_II/TGFBeta-II_recpt,pfscan_Prot_kinase_cat_dom - no_errors TGFBR2 HGNC ENSG00000163513 105 1 0.94 127 72 36.18 - - - TMPPE 0 genome.wustl.edu 37 3 33135082 33135082 + Silent SNP G G C TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 3 33135082 33135082 G C SNP TMPPE ENST00000342462 human ensembl 69_37n -1 known silent c.606 p.A202 0.000 NULL pfam_Metallo_PEstase_dom - no_errors TMPPE HGNC ENSG00000188167 67 0 0.00 163 31 15.98 - - - TOX2 0 genome.wustl.edu 37 20 42683009 42683009 + Missense_Mutation SNP A A T TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 20 42683009 42683009 A T SNP TOX2 ENST00000341197 human ensembl 69_37n +1 known missense c.722 p.K241M 1.000 superfamily_HMG_superfamily pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily - no_errors TOX2 HGNC ENSG00000124191 49 0 0.00 101 37 26.62 - - - TP53 0 genome.wustl.edu 37 17 7578263 7578263 + Nonsense_Mutation SNP G G A TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 17 7578263 7578263 G A SNP TP53 ENST00000269305 human ensembl 69_37n -1 known nonsense c.586 p.R196* 1.000 pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor - no_errors TP53 HGNC ENSG00000141510 179 0 0.00 104 200 65.79 - - - URI1 0 genome.wustl.edu 37 19 30505832 30505832 + Silent SNP A A G TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 19 30505832 30505832 A G SNP URI1 ENST00000542441 human ensembl 69_37n +1 known silent c.1464 p.S488 0.011 NULL pfam_Prefoldin_subunit,superfamily_Prefoldin - no_errors URI1 HGNC ENSG00000105176 144 0 0.00 93 51 33.12 - - - ZNF726 0 genome.wustl.edu 37 19 24115276 24115276 + Missense_Mutation SNP G G T TCGA-AR-A1AP-01A-11D-A12Q-09 TCGA-AR-A1AP-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 597e37c9-f0c9-4839-800e-6e9519ec3add db345a86-cbeb-4514-b490-b730372b90dc 19 24115276 24115276 G T SNP ZNF726 ENST00000322487 human ensembl 69_37n +1 known missense c.358 p.V120L 0.007 NULL pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF726 HGNC ENSG00000213967 236 1 0.42 100 12 10.71 - - -