Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All AASDHPPT 0 genome.wustl.edu 37 11 105948464 105948464 + Missense_Mutation SNP C C G TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 11 105948464 105948464 C G SNP AASDHPPT ENST00000278618 human ensembl 69_37n +1 known missense c.27 p.C9W 0.047 NULL pfam_4-PPantetheinyl_Trfase,superfamily_4-PPantetheinyl_Trfase - no_errors AASDHPPT HGNC ENSG00000149313 118 0 0.00 81 26 24.30 - - - ABCA12 0 genome.wustl.edu 37 2 215843156 215843156 + Frame_Shift_Del DEL T T - TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 2 215843156 215843156 T - DEL ABCA12 ENST00000272895 human ensembl 69_37n -1 known frame_shift_del c.5012 p.N1671fs 0.000 NULL pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like - no_errors ABCA12 HGNC ENSG00000144452 404 0 0.00 245 199 44.52 - - - ABCC8 0 genome.wustl.edu 37 11 17498260 17498260 + Missense_Mutation SNP G G A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 11 17498260 17498260 G A SNP ABCC8 ENST00000302539 human ensembl 69_37n -1 known missense c.64 p.L22F 1.000 NULL pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1 - no_errors ABCC8 HGNC ENSG00000006071 30 0 0.00 27 6 18.18 - - - AP5B1 0 genome.wustl.edu 37 11 65545388 65545391 + Frame_Shift_Del DEL TCGG TCGG - TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 TCGG TCGG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 11 65545388 65545391 TCGG - DEL AP5B1 ENST00000532090 human ensembl 69_37n -1 novel frame_shift_del c.2576_2573 p.T858fs 0.358:0.353:0.075:0.964 NULL NULL - no_errors AP5B1 HGNC ENSG00000254470 16 0 0.00 13 4 23.53 - - - APOBEC2 0 genome.wustl.edu 37 6 41029366 41029367 + Frame_Shift_Ins INS - - CC TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 6 41029366 41029367 - CC INS APOBEC2 ENST00000244669 human ensembl 69_37n +1 known frame_shift_ins c.431_432 p.L145fs 1.000:1.000 pfam_APOBEC_N,superfamily_Cytidine_deaminase-like pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like - no_errors APOBEC2 HGNC ENSG00000124701 103 0 0.00 152 20 11.63 - - - ATG2B 0 genome.wustl.edu 37 14 96779679 96779679 + Missense_Mutation SNP C C A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 14 96779679 96779679 C A SNP ATG2B ENST00000359933 human ensembl 69_37n -1 known missense c.3736 p.A1246S 1.000 NULL pfam_Autophagy-rel_C - no_errors ATG2B HGNC ENSG00000066739 163 0 0.00 61 31 33.70 - - - ATN1 0 genome.wustl.edu 37 12 7048007 7048007 + Missense_Mutation SNP C C T TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 12 7048007 7048007 C T SNP ATN1 ENST00000356654 human ensembl 69_37n +1 known missense c.2881 p.H961Y 0.614 pfam_Atrophin-like pfam_Atrophin-like,prints_Atrophin-1 - no_errors ATN1 HGNC ENSG00000111676 29 0 0.00 22 8 26.67 - - - BACH1 0 genome.wustl.edu 37 21 30699407 30699407 + Missense_Mutation SNP C C T TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 21 30699407 30699407 C T SNP BACH1 ENST00000286800 human ensembl 69_37n +1 known missense c.1262 p.A421V 0.951 NULL pfam_BTB_POZ,pfam_bZIP_1,pfam_bZIP_2,superfamily_BTB/POZ_fold,superfamily_Euk_TF_DNA-bd,smart_BTB/POZ-like,smart_bZIP,pfscan_BTB/POZ-like,pfscan_bZIP - no_errors BACH1 HGNC ENSG00000156273 114 0 0.00 123 41 25.00 - - - CCPG1 0 genome.wustl.edu 37 15 55681620 55681620 + Missense_Mutation SNP C C G TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 15 55681620 55681620 C G SNP CCPG1 ENST00000310958 human ensembl 69_37n -1 known missense c.3 p.M1I 1.000 NULL NULL - no_errors CCPG1 HGNC ENSG00000260916 203 0 0.00 81 24 22.86 - - - CNPY3 0 genome.wustl.edu 37 6 42906359 42906359 + Missense_Mutation SNP G G C TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 6 42906359 42906359 G C SNP CNPY3 ENST00000372836 human ensembl 69_37n +1 known missense c.667 p.G223R 0.997 NULL pfam_DUF3456 - no_errors CNPY3 HGNC ENSG00000137161 217 0 0.00 299 49 14.04 - - - CORO7 0 genome.wustl.edu 37 16 4458194 4458194 + Silent SNP C C A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 16 4458194 4458194 C A SNP CORO7 ENST00000572467 human ensembl 69_37n -1 known silent c.291 p.S97 0.226 pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom pfam_DUF1900,pfam_Protein_transpt,pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom - no_errors CORO7 HGNC ENSG00000103426 114 0 0.00 130 26 14.53 - - - DCC 0 genome.wustl.edu 37 18 50985621 50985621 + Missense_Mutation SNP G G A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 18 50985621 50985621 G A SNP DCC ENST00000442544 human ensembl 69_37n +1 known missense c.3412 p.A1138T 0.998 pfam_Neogenin_C pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like - no_errors DCC HGNC ENSG00000187323 103 0 0.00 76 18 19.15 - - - DNAH7 0 genome.wustl.edu 37 2 196749476 196749476 + Nonsense_Mutation SNP G G A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 2 196749476 196749476 G A SNP DNAH7 ENST00000312428 human ensembl 69_37n -1 known nonsense c.5596 p.R1866* 1.000 NULL pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_HAND_2 - no_errors DNAH7 HGNC ENSG00000118997 188 0 0.00 125 102 44.93 - - - DRD5 0 genome.wustl.edu 37 4 9784550 9784550 + Silent SNP G G A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 4 9784550 9784550 G A SNP DRD5 ENST00000304374 human ensembl 69_37n +1 known silent c.897 p.S299 0.303 pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_Dopa_1B_rcpt,prints_Dopamine_rcpt - no_errors DRD5 HGNC ENSG00000169676 36 0 0.00 28 4 12.50 - - - FLII 0 genome.wustl.edu 37 17 18155040 18155040 + Missense_Mutation SNP A A C TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 17 18155040 18155040 A C SNP FLII ENST00000327031 human ensembl 69_37n -1 known missense c.1337 p.L446R 1.000 NULL pfam_Gelsolin_dom,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Gelsolin,prints_Gelsolin - no_errors FLII HGNC ENSG00000177731 189 1 0.53 111 49 30.63 - - - FLT1 0 genome.wustl.edu 37 13 28896410 28896410 + Missense_Mutation SNP A A G TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 13 28896410 28896410 A G SNP FLT1 ENST00000282397 human ensembl 69_37n -1 known missense c.3040 p.S1014P 1.000 pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_cat_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,prints_Tyr_kinase_VEGFR1_rcpt_N,prints_Tyr_kinase_VEGFR_rcpt_N - no_errors FLT1 HGNC ENSG00000102755 209 0 0.00 75 96 56.14 - - - FNIP1 0 genome.wustl.edu 37 5 131046309 131046309 + Missense_Mutation SNP C C A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 5 131046309 131046309 C A SNP FNIP1 ENST00000510461 human ensembl 69_37n -1 known missense c.668 p.G223V 1.000 NULL NULL - no_errors FNIP1 HGNC ENSG00000217128 86 0 0.00 48 24 33.33 - - - GAB4 0 genome.wustl.edu 37 22 17468927 17468927 + Missense_Mutation SNP C C T TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 22 17468927 17468927 C T SNP GAB4 ENST00000465611 human ensembl 69_37n -1 known missense c.443 p.R148H 0.533 NULL pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology - no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region GAB4 HGNC ENSG00000215568 120 0 0.00 64 19 22.89 - - - GALNT3 0 genome.wustl.edu 37 2 166618455 166618455 + Silent SNP T T C TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 2 166618455 166618455 T C SNP GALNT3 ENST00000392701 human ensembl 69_37n -1 known silent c.798 p.T266 0.973 pfam_Glyco_trans_2 pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin - no_errors GALNT3 HGNC ENSG00000115339 341 0 0.00 152 119 43.91 - - - GREB1L 0 genome.wustl.edu 37 18 19102675 19102675 + Missense_Mutation SNP C C T TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 18 19102675 19102675 C T SNP GREB1L ENST00000424526 human ensembl 69_37n +1 known missense c.5665 p.R1889C 1.000 NULL NULL - no_errors GREB1L HGNC ENSG00000141449 174 0 0.00 112 43 27.74 - - - HOXD11 0 genome.wustl.edu 37 2 176973668 176973668 + Missense_Mutation SNP C C A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 2 176973668 176973668 C A SNP HOXD11 ENST00000249504 human ensembl 69_37n +1 known missense c.815 p.P272H 1.000 pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain pfam_DUF3528,pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa - no_errors HOXD11 HGNC ENSG00000128713 126 0 0.00 105 20 16.00 - - - IPO13 0 genome.wustl.edu 37 1 44413299 44413299 + Silent SNP G G T TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 1 44413299 44413299 G T SNP IPO13 ENST00000372343 human ensembl 69_37n +1 known silent c.27 p.G9 1.000 NULL pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N - no_errors IPO13 HGNC ENSG00000117408 55 0 0.00 44 9 16.98 - - - LIPT2 0 genome.wustl.edu 37 11 74203306 74203306 + Silent SNP T T G TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 11 74203306 74203306 T G SNP LIPT2 ENST00000310109 human ensembl 69_37n -1 known silent c.570 p.T190 0.853 tigrfam_Octanoyltransferase pfam_BPL_LipA_LipB,tigrfam_Octanoyltransferase - no_errors LIPT2 HGNC ENSG00000175536 114 0 0.00 123 28 18.54 - - - LRRC41 0 genome.wustl.edu 37 1 46746855 46746855 + Frame_Shift_Del DEL A A - TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 1 46746855 46746855 A - DEL LRRC41 ENST00000343304 human ensembl 69_37n -1 known frame_shift_del c.1698 p.G567fs 0.983 NULL smart_Leu-rich_rpt_RNase_inh_sub-typ - no_errors LRRC41 HGNC ENSG00000132128 96 0 0.00 83 19 17.43 - - - MUC16 0 genome.wustl.edu 37 19 9074465 9074465 + Silent SNP G G A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 19 9074465 9074465 G A SNP MUC16 ENST00000397910 human ensembl 69_37n -1 known silent c.12981 p.V4327 0.000 NULL pfam_SEA,smart_SEA,pfscan_SEA - no_errors MUC16 HGNC ENSG00000181143 273 0 0.00 222 80 26.49 - - - MYO18A 0 genome.wustl.edu 37 17 27401792 27401792 + Missense_Mutation SNP G G A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 17 27401792 27401792 G A SNP MYO18A ENST00000354329 human ensembl 69_37n -1 known missense c.6161 p.A2054V 0.687 NULL pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_PDZ,superfamily_PDZ,superfamily_Regulat_G_prot_signal_superfam,smart_PDZ,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_PDZ,pfscan_RecA_monomer-monomer_interface,prints_Myosin_head_motor_dom - no_errors MYO18A HGNC ENSG00000196535 271 0 0.00 144 71 33.02 - - - NAMPTL 0 genome.wustl.edu 37 10 36811916 36811916 + Missense_Mutation SNP G G A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 10 36811916 36811916 G A SNP NAMPTL ENST00000543053 human ensembl 69_37n -1 known missense c.191 p.T64M 1.000 pfam_Nic_PRibTrfase-like,superfamily_Quinolinate_PRibosylTrfase_C pfam_Nic_PRibTrfase-like,superfamily_Quinolinate_PRibosylTrfase_C - no_errors NAMPTL HGNC ENSG00000229644 379 0 0.00 557 144 20.51 - - - NWD1 0 genome.wustl.edu 37 19 16918910 16918910 + Missense_Mutation SNP T T C TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 19 16918910 16918910 T C SNP NWD1 ENST00000379808 human ensembl 69_37n +1 known missense c.4250 p.L1417P 0.997 pfscan_WD40_repeat,pfscan_WD40_repeat_dom pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom - no_errors NWD1 HGNC ENSG00000188039 85 0 0.00 125 17 11.97 - - - OR51C1P 0 genome.wustl.edu 37 11 4712725 4712725 + Missense_Mutation SNP C C T TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 11 4712725 4712725 C T SNP OR51C1P ENST00000357764 human ensembl 69_37n -1 known missense c.202 p.A68T 0.074 pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn - no_errors OR51C1P HGNC ENSG00000197674 9 0 0.00 15 9 37.50 - - - PARD3 0 genome.wustl.edu 37 10 34400454 34400454 + Missense_Mutation SNP G G C TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 10 34400454 34400454 G C SNP PARD3 ENST00000374789 human ensembl 69_37n -1 known missense c.3714 p.D1238E 0.952 NULL pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ - no_errors PARD3 HGNC ENSG00000148498 97 0 0.00 169 25 12.89 - - - PIP5K1C 0 genome.wustl.edu 37 19 3643289 3643289 + Missense_Mutation SNP G G A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 19 3643289 3643289 G A SNP PIP5K1C ENST00000537021 human ensembl 69_37n -1 known missense c.1601 p.S534F 1.000 NULL pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub - no_errors PIP5K1C HGNC ENSG00000186111 237 0 0.00 114 51 30.91 - - - PLD5 0 genome.wustl.edu 37 1 242287770 242287770 + Silent SNP C C T TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 1 242287770 242287770 C T SNP PLD5 ENST00000536534 human ensembl 69_37n -1 known silent c.933 p.S311 1.000 NULL smart_PLipase_D/transphosphatidylase - no_errors PLD5 HGNC ENSG00000180287 285 1 0.35 187 52 21.76 - - - PREX1 0 genome.wustl.edu 37 20 47296244 47296244 + Missense_Mutation SNP C C T TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 20 47296244 47296244 C T SNP PREX1 ENST00000371941 human ensembl 69_37n -1 known missense c.1484 p.R495H 1.000 smart_DEP_dom,pfscan_DEP_dom pfam_DH-domain,pfam_DEP_dom,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain - no_errors PREX1 HGNC ENSG00000124126 135 0 0.00 144 35 19.44 - - - RB1 0 genome.wustl.edu 37 13 48934189 48934189 + Nonsense_Mutation SNP C C G TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 13 48934189 48934189 C G SNP RB1 ENST00000267163 human ensembl 69_37n +1 known nonsense c.644 p.S215* 1.000 pfam_DUF3452_retinoblatoma-assoc pfam_Rb_C,pfam_RB_A,pfam_RB_B,pfam_DUF3452_retinoblatoma-assoc,superfamily_Cyclin-like,superfamily_FH2_actin-bd,smart_Cyclin-like - no_errors RB1 HGNC ENSG00000139687 337 0 0.00 110 96 46.60 - - - RNF144A 0 genome.wustl.edu 37 2 7179763 7179763 + Missense_Mutation SNP G G A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 2 7179763 7179763 G A SNP RNF144A ENST00000320892 human ensembl 69_37n +1 known missense c.751 p.V251M 1.000 NULL pfam_Znf_C6HC,smart_Znf_C6HC,pfscan_Znf_RING - no_errors RNF144A HGNC ENSG00000151692 426 0 0.00 246 185 42.92 - - - S1PR2 0 genome.wustl.edu 37 19 10334727 10334727 + Silent SNP G G A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 19 10334727 10334727 G A SNP S1PR2 ENST00000590320 human ensembl 69_37n -1 known silent c.855 p.P285 0.152 pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_7TM_GPCR_Rhodpsn,prints_Melcrt_ACTH_rcpt,pfscan_GPCR_Rhodpsn_supfam pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_EDG5_rcpt,prints_7TM_GPCR_Rhodpsn,prints_S1P_rcpt,prints_Melcrt_ACTH_rcpt,pfscan_GPCR_Rhodpsn_supfam - no_errors S1PR2 Clone_based_vega_gene ENSG00000267534 105 0 0.00 84 25 22.94 - - - SEMA3A 0 genome.wustl.edu 37 7 83823815 83823815 + Missense_Mutation SNP G G C TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 7 83823815 83823815 G C SNP SEMA3A ENST00000265362 human ensembl 69_37n -1 known missense c.88 p.P30A 1.000 superfamily_Semaphorin/CD100_Ag pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_Ig_sub,pfscan_Semaphorin/CD100_Ag,pfscan_Ig-like - no_errors SEMA3A HGNC ENSG00000075213 385 1 0.26 316 94 22.93 - - - SPDEF 0 genome.wustl.edu 37 6 34506131 34506131 + Missense_Mutation SNP G G A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 6 34506131 34506131 G A SNP SPDEF ENST00000374037 human ensembl 69_37n -1 known missense c.928 p.R310C 1.000 pfam_Ets,smart_Ets,pfscan_Ets,prints_Ets pfam_Ets,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets,pfscan_Ets,prints_Ets - no_errors SPDEF HGNC ENSG00000124664 291 1 0.34 146 100 40.49 - - - SPTA1 0 genome.wustl.edu 37 1 158615165 158615165 + Missense_Mutation SNP G G A TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 1 158615165 158615165 G A SNP SPTA1 ENST00000368148 human ensembl 69_37n -1 known missense c.4007 p.A1336V 0.950 pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_HAND_2,pfscan_SH3_domain,prints_Spectrin_alpha_SH3 - no_errors SPTA1 HGNC ENSG00000163554 166 0 0.00 110 50 31.25 - - - STIM1 0 genome.wustl.edu 37 11 4091418 4091418 + Missense_Mutation SNP A A G TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 11 4091418 4091418 A G SNP STIM1 ENST00000300737 human ensembl 69_37n +1 known missense c.776 p.H259R 1.000 NULL pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM - no_errors STIM1 HGNC ENSG00000167323 229 0 0.00 193 58 23.11 - - - TP53 0 genome.wustl.edu 37 17 7574003 7574003 + Frame_Shift_Del DEL G G - TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 17 7574003 7574003 G - DEL TP53 ENST00000269305 human ensembl 69_37n -1 known frame_shift_del c.1024 p.R342fs 0.307 pfam_p53_tetrameristn,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor - no_errors TP53 HGNC ENSG00000141510 108 0 0.00 53 19 26.03 - - - WWP2 0 genome.wustl.edu 37 16 69972999 69972999 + Frame_Shift_Del DEL C C - TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 16 69972999 69972999 C - DEL WWP2 ENST00000356003 human ensembl 69_37n +1 known frame_shift_del c.2413 p.V806fs 1.000 pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT pfam_HECT,pfam_WW_Rsp5_WWP,superfamily_HECT,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_WW_Rsp5_WWP,smart_C2_Ca-dep,smart_WW_Rsp5_WWP,smart_HECT,pfscan_HECT,pfscan_WW_Rsp5_WWP - no_errors WWP2 HGNC ENSG00000198373 225 0 0.00 109 56 33.33 - - - ZBTB33 0 genome.wustl.edu 37 X 119389284 119389285 + Frame_Shift_Ins INS - - TA TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 X 119389284 119389285 - TA INS ZBTB33 ENST00000326624 human ensembl 69_37n +1 known frame_shift_ins c.2014_2015 p.Y672fs 1.000:1.000 NULL pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2 - no_errors ZBTB33 HGNC ENSG00000177485 49 0 0.00 20 6 23.08 - - - ZFP36L2 0 genome.wustl.edu 37 2 43452831 43452832 + Frame_Shift_Ins INS - - C TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 2 43452831 43452832 - C INS ZFP36L2 ENST00000282388 human ensembl 69_37n -1 known frame_shift_ins c.112_111 p.T37fs 1.000:0.993 pfam_Tis11B_N pfam_Tis11B_N,pfam_Znf_CCCH,smart_Znf_CCCH - no_errors ZFP36L2 HGNC ENSG00000152518 17 0 0.00 12 3 20.00 - - - ZNF726 0 genome.wustl.edu 37 19 24116016 24116016 + Missense_Mutation SNP G G C TCGA-AR-A1AQ-01A-11D-A12Q-09 TCGA-AR-A1AQ-10A-01D-A12Q-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 88ff7728-ecc9-4ec5-817e-4793619ab5a4 3f1960e3-339f-42e6-a925-fa21d1d6e2a5 19 24116016 24116016 G C SNP ZNF726 ENST00000322487 human ensembl 69_37n +1 known missense c.1098 p.E366D 1.000 pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF726 HGNC ENSG00000213967 76 0 0.00 47 17 26.56 - - -