Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All ACPP 0 genome.wustl.edu 37 3 132047117 132047117 + Missense_Mutation SNP C C T TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 3 132047117 132047117 C T SNP ACPP ENST00000351273 human ensembl 69_37n +1 known missense c.127 p.R43W 1.000 pfam_His_Pase_superF_clade-2 pfam_His_Pase_superF_clade-2 - no_errors ACPP HGNC ENSG00000014257 20 0 0.00 17 7 29.17 - - - ALG13 0 genome.wustl.edu 37 X 110951473 110951473 + Missense_Mutation SNP T T C TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 X 110951473 110951473 T C SNP ALG13 ENST00000251943 human ensembl 69_37n +1 known missense c.290 p.L97P 0.000 NULL pfam_OTU,pfscan_OTU,pfscan_Tudor - no_errors ALG13 HGNC ENSG00000101901 74 0 0.00 46 29 38.67 - - - AMY2A 0 genome.wustl.edu 37 1 104166496 104166496 + Silent SNP T T C TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 1 104166496 104166496 T C SNP AMY2A ENST00000414303 human ensembl 69_37n +1 known silent c.1110 p.N370 1.000 superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase - no_errors AMY2A HGNC ENSG00000243480 60 0 0.00 45 6 11.76 - - - B4GALT1 0 genome.wustl.edu 37 9 33135286 33135286 + Silent SNP T T C TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 9 33135286 33135286 T C SNP B4GALT1 ENST00000379731 human ensembl 69_37n -1 known silent c.549 p.P183 0.990 pfam_Galactosyl_T_2_met pfam_Galactosyl_T_2_met,prints_Galactosyl_T_2_met - no_errors B4GALT1 HGNC ENSG00000086062 55 0 0.00 34 12 26.09 - - - CARD6 0 genome.wustl.edu 37 5 40841761 40841761 + Silent SNP A A C TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 5 40841761 40841761 A C SNP CARD6 ENST00000254691 human ensembl 69_37n +1 known silent c.277 p.R93 0.003 superfamily_DEATH-like pfam_CARD,superfamily_DEATH-like,smart_CARD,pfscan_CARD - no_errors CARD6 HGNC ENSG00000132357 63 0 0.00 48 23 32.39 - - - CCDC114 0 genome.wustl.edu 37 19 48821779 48821779 + Silent SNP G G A TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 19 48821779 48821779 G A SNP CCDC114 ENST00000315396 human ensembl 69_37n -1 known silent c.114 p.S38 0.000 NULL NULL - no_errors CCDC114 HGNC ENSG00000105479 20 0 0.00 17 13 43.33 - - - CDH1 0 genome.wustl.edu 37 16 68862076 68862076 + Splice_Site SNP G G T TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 16 68862076 68862076 G T SNP CDH1 ENST00000261769 human ensembl 69_37n +1 known splice_site c.2165-1 e14-1 1.000 - - - no_errors CDH1 HGNC ENSG00000039068 74 0 0.00 27 23 46.00 - - - CRK 0 genome.wustl.edu 37 17 1340206 1340206 + Missense_Mutation SNP C C T TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 17 1340206 1340206 C T SNP CRK ENST00000300574 human ensembl 69_37n -1 known missense c.485 p.R162Q 1.000 pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain pfam_SH3_2,pfam_SH2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH2,smart_SH3_domain,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain - no_errors CRK HGNC ENSG00000167193 52 0 0.00 22 20 47.62 - - - CROCCP2 0 genome.wustl.edu 37 1 16950687 16950687 + RNA SNP G G T TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 1 16950687 16950687 G T SNP CROCCP2 ENST00000421700 human ensembl 69_37n -1 known rna NULL NULL 0.003 - - - no_errors CROCCP2 HGNC ENSG00000215908 9 0 0.00 17 5 22.73 - - - ELF4 0 genome.wustl.edu 37 X 129201171 129201171 + Missense_Mutation SNP C C T TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 X 129201171 129201171 C T SNP ELF4 ENST00000308167 human ensembl 69_37n -1 known missense c.1517 p.G506E 0.152 NULL pfam_TF_Elf_N,pfam_Ets,smart_Ets,pfscan_Ets,prints_Ets - no_errors ELF4 HGNC ENSG00000102034 22 0 0.00 12 10 45.45 - - - EP400 0 genome.wustl.edu 37 12 132466866 132466866 + Missense_Mutation SNP A A G TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 12 132466866 132466866 A G SNP EP400 ENST00000333577 human ensembl 69_37n +1 known missense c.1880 p.Q627R 0.996 NULL pfam_SNF2_N,pfam_HSA,pfam_Helicase_C,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C - no_errors EP400 HGNC ENSG00000183495 33 0 0.00 15 8 33.33 - - - FAM188B 0 genome.wustl.edu 37 7 30825399 30825399 + Missense_Mutation SNP T T A TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 7 30825399 30825399 T A SNP FAM188B ENST00000265299 human ensembl 69_37n +1 known missense c.454 p.F152I 0.442 NULL NULL - no_errors FAM188B HGNC ENSG00000106125 54 0 0.00 39 22 36.07 - - - GATA3 0 genome.wustl.edu 37 10 8111433 8111434 + Splice_Site DEL CA CA - TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 CA CA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 10 8111433 8111434 CA - DEL GATA3 ENST00000379328 human ensembl 69_37n +1 known splice_site_del c.925-3_925-2 e4-2 1.000:1.000 - - - no_errors GATA3 HGNC ENSG00000107485 38 0 0 26 5 16.13 - - - GPR116 0 genome.wustl.edu 37 6 46826226 46826226 + Silent SNP G G A TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 6 46826226 46826226 G A SNP GPR116 ENST00000265417 human ensembl 69_37n -1 known silent c.3414 p.C1138 1.000 pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like pfam_GPCR_2_secretin-like,pfam_SEA,pfam_GPS_dom,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,pfscan_Ig-like,prints_GPCR_2_Ig-hepta_rcpt,prints_GPCR_2_secretin-like - no_errors GPR116 HGNC ENSG00000069122 24 0 0.00 14 7 33.33 - - - HMGCS1 0 genome.wustl.edu 37 5 43294939 43294939 + Nonsense_Mutation SNP G G T TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 5 43294939 43294939 G T SNP HMGCS1 ENST00000325110 human ensembl 69_37n -1 known nonsense c.930 p.Y310* 1.000 pfam_HMG_CoA_synt_C,superfamily_Thiolase-like,tigrfam_HMG_CoA_synthase_euk pfam_HMG_CoA_synt_C,pfam_HMG_CoA_synth_N,superfamily_Thiolase-like,tigrfam_HMG_CoA_synthase_euk - no_errors HMGCS1 HGNC ENSG00000112972 75 0 0.00 58 9 13.43 - - - HSCB 0 genome.wustl.edu 37 22 29141935 29141935 + Missense_Mutation SNP T T A TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 22 29141935 29141935 T A SNP HSCB ENST00000216027 human ensembl 69_37n +1 known missense c.507 p.N169K 1.000 pfam_Heat_shock_cognate_B_oligo_C,superfamily_Heat_shock_cognate_B_oligo_C,tigrfam_HscB pfam_Heat_shock_cognate_B_oligo_C,pfam_DnaJ_N,superfamily_DnaJ_N,superfamily_Heat_shock_cognate_B_oligo_C,tigrfam_HscB - no_errors HSCB HGNC ENSG00000100209 44 0 0.00 13 15 53.57 - - - IQSEC2 0 genome.wustl.edu 37 X 53264131 53264133 + In_Frame_Del DEL TGG TGG - TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 TGG TGG Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 X 53264131 53264133 TGG - DEL IQSEC2 ENST00000396435 human ensembl 69_37n -1 known in_frame_del c.3737_3735 p.H1247in_frame_del 0.997:0.991:0.967 NULL pfam_Sec7,superfamily_Sec7,smart_Sec7,smart_Pleckstrin_homology,pfscan_IQ_motif_EF-hand-BS,pfscan_Sec7 - no_errors IQSEC2 HGNC ENSG00000124313 36 0 0.00 34 6 15.00 - - - KIAA0754 0 genome.wustl.edu 37 1 39878515 39878515 + Missense_Mutation SNP A A G TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 1 39878515 39878515 A G SNP KIAA0754 ENST00000530275 human ensembl 69_37n +1 known missense c.2170 p.I724V 0.000 NULL NULL - no_errors KIAA0754 HGNC ENSG00000255103 34 0 0.00 25 13 34.21 - - - KIAA1210 0 genome.wustl.edu 37 X 118222466 118222466 + Silent SNP C C A TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 X 118222466 118222466 C A SNP KIAA1210 ENST00000402510 human ensembl 69_37n -1 known silent c.2727 p.L909 0.000 NULL NULL - no_errors KIAA1210 HGNC ENSG00000250423 43 0 0.00 26 17 39.53 - - - LRRC4B 0 genome.wustl.edu 37 19 51021711 51021711 + Missense_Mutation SNP G G A TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 19 51021711 51021711 G A SNP LRRC4B ENST00000389201 human ensembl 69_37n -1 known missense c.1259 p.T420M 1.000 pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like - no_errors LRRC4B HGNC ENSG00000131409 19 0 0.00 11 10 47.62 - - - MEGF8 0 genome.wustl.edu 37 19 42875614 42875614 + Nonsense_Mutation SNP C C T TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 19 42875614 42875614 C T SNP MEGF8 ENST00000251268 human ensembl 69_37n +1 known nonsense c.7249 p.R2417* 1.000 smart_EGF-like pfam_CUB,pfam_EGF_laminin,pfam_Plexin_repeat,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_CUB,superfamily_Plexin-like_fold,smart_CUB,smart_EGF-like,smart_Plexin-like,smart_EGF-like_Ca-bd,smart_EGF_laminin,pfscan_CUB,pfscan_EG-like_dom,pfscan_EGF_laminin - no_errors MEGF8 HGNC ENSG00000105429 24 0 0.00 14 9 39.13 - - - MUC5B 0 genome.wustl.edu 37 11 1251759 1251759 + Missense_Mutation SNP C C T TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 11 1251759 1251759 C T SNP MUC5B ENST00000447027 human ensembl 69_37n +1 known missense c.1408 p.R470W 0.980 pfam_VWF_type-D,smart_VWF_type-D pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C - no_errors MUC5B HGNC ENSG00000117983 12 0 0.00 13 6 31.58 - - - POLR2J 0 genome.wustl.edu 37 7 102116678 102116678 + Silent SNP A A G TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 7 102116678 102116678 A G SNP POLR2J ENST00000393794 human ensembl 69_37n -1 known silent c.93 p.C31 0.723 superfamily_DNA-dir_RNA_pol_RBP11-like pfam_DNA-dir_RNA_pol_dimersation,superfamily_DNA-dir_RNA_pol_RBP11-like - no_errors POLR2J HGNC ENSG00000005075 51 0 0.00 34 4 10.53 - - - PRMT7 0 genome.wustl.edu 37 16 68379634 68379634 + Silent SNP G G T TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 16 68379634 68379634 G T SNP PRMT7 ENST00000339507 human ensembl 69_37n +1 known silent c.984 p.V328 0.000 pirsf_Arg_MeTrfase_PRMT7 pfam_Ribosomal-L11_MeTrfase_PrmA,pirsf_Arg_MeTrfase_PRMT7 - no_errors PRMT7 HGNC ENSG00000132600 21 0 0.00 7 7 50.00 - - - RBM19 0 genome.wustl.edu 37 12 114395756 114395756 + Missense_Mutation SNP G G A TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 12 114395756 114395756 G A SNP RBM19 ENST00000261741 human ensembl 69_37n -1 known missense c.671 p.S224L 0.000 NULL pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom - no_errors RBM19 HGNC ENSG00000122965 41 0 0.00 33 14 29.79 - - - RPGR 0 genome.wustl.edu 37 X 38146402 38146402 + Missense_Mutation SNP C C A TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 X 38146402 38146402 C A SNP RPGR ENST00000378505 human ensembl 69_37n -1 known missense c.1850 p.G617V 0.002 NULL pfam_Reg_chr_condens,superfamily_Reg_csome_cond/b-lactamase_inh,pfscan_Reg_chr_condens,prints_Reg_chr_condens - no_errors RPGR HGNC ENSG00000156313 64 0 0.00 50 8 13.79 - - - RRP7B 0 genome.wustl.edu 37 22 42972614 42972614 + RNA SNP T T C TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 22 42972614 42972614 T C SNP RRP7B ENST00000357802 human ensembl 69_37n -1 known rna NULL NULL 1.000 - - - no_errors RRP7B HGNC ENSG00000182841 16 0 0.00 7 7 50.00 - - - SAMD4A 0 genome.wustl.edu 37 14 55251070 55251070 + Missense_Mutation SNP A A G TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 14 55251070 55251070 A G SNP SAMD4A ENST00000555192 human ensembl 69_37n +1 novel missense c.830 p.H277R 0.000 NULL NULL - no_errors SAMD4A HGNC ENSG00000020577 49 0 0.00 46 22 32.35 - - - SDHAP1 0 genome.wustl.edu 37 3 195701310 195701311 + Splice_Site INS - - AA TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 - - Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 3 195701310 195701311 - AA INS SDHAP1 ENST00000354937 human ensembl 69_37n -1 known splice_site_ins c.NULL NULL 1.000:0.999 - - - no_coding_region:pseudogene SDHAP1 HGNC ENSG00000185485 47 0 0.00 36 5 12.20 - - - TMEM132C 0 genome.wustl.edu 37 12 129180412 129180412 + Silent SNP C C A TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 12 129180412 129180412 C A SNP TMEM132C ENST00000435159 human ensembl 69_37n +1 known silent c.1693 p.R565 0.828 NULL NULL - no_errors TMEM132C HGNC ENSG00000181234 17 0 0.00 12 5 29.41 - - - TRBV5-1 0 genome.wustl.edu 37 7 142021145 142021145 + Missense_Mutation SNP G G T TCGA-AR-A24X-01A-11D-A167-09 TCGA-AR-A24X-10A-01D-A167-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 53d55f5a-df86-44d7-a3a2-2dccc2557b7b 68357e67-adff-4cd3-a458-c6ed719032d2 7 142021145 142021145 G T SNP TRBV5-1 ENST00000390381 human ensembl 69_37n +1 known missense c.125 p.C42F 0.003 pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like - no_stop_codon:bad_bp_length_for_coding_region TRBV5-1 HGNC ENSG00000211734 49 0 0.00 34 15 30.61 - - -