Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All ATG16L1 0 genome.wustl.edu 37 2 234201936 234201936 + Missense_Mutation SNP G G A TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 2 234201936 234201936 G A SNP ATG16L1 ENST00000392017 human ensembl 69_37n +1 known missense c.1663 p.E555K 0.994 pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom pfam_Autophagy-rel_prot_16,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Prefoldin,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom - no_errors ATG16L1 HGNC ENSG00000085978 211 1 0.47 124 133 51.75 - - - CACHD1 0 genome.wustl.edu 37 1 65120486 65120486 + Missense_Mutation SNP G G A TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 1 65120486 65120486 G A SNP CACHD1 ENST00000371073 human ensembl 69_37n +1 known missense c.1782 p.M594I 1.000 NULL pfam_VWA_N,pfam_Cache_domain,pfscan_VWF_A - no_errors CACHD1 HGNC ENSG00000158966 284 0 0.00 126 110 46.41 - - - CASZ1 0 genome.wustl.edu 37 1 10714168 10714168 + Missense_Mutation SNP T T C TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 1 10714168 10714168 T C SNP CASZ1 ENST00000377022 human ensembl 69_37n -1 known missense c.1946 p.Y649C 1.000 NULL smart_Znf_C2H2-like,pfscan_Znf_C2H2 - no_errors CASZ1 HGNC ENSG00000130940 191 1 0.52 89 72 44.72 - - - CBLB 0 genome.wustl.edu 37 3 105397361 105397361 + Missense_Mutation SNP G G A TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 3 105397361 105397361 G A SNP CBLB ENST00000264122 human ensembl 69_37n -1 known missense c.2483 p.A828V 1.000 NULL pfam_Adaptor_Cbl_N_hlx,pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Znf_C3HC4_RING-type,pfam_UBA/transl_elong_EF1B_N,superfamily_Adaptor_Cbl_N_hlx,superfamily_UBA-like,smart_Znf_RING,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RING - no_errors CBLB HGNC ENSG00000114423 330 0 0.00 229 39 14.39 - - - CDH1 0 genome.wustl.edu 37 16 68842414 68842414 + Frame_Shift_Del DEL C C - TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 16 68842414 68842414 C - DEL CDH1 ENST00000261769 human ensembl 69_37n +1 known frame_shift_del c.475 p.P159fs 1.000 superfamily_Cadherin-like pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin - no_errors CDH1 HGNC ENSG00000039068 190 0 0.00 137 66 31.88 - - - COL17A1 0 genome.wustl.edu 37 10 105801282 105801282 + Nonsense_Mutation SNP G G A TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 10 105801282 105801282 G A SNP COL17A1 ENST00000353479 human ensembl 69_37n -1 known nonsense c.2566 p.Q856* 1.000 NULL pfam_Collagen - no_errors COL17A1 HGNC ENSG00000065618 82 0 0.00 70 13 15.66 - - - DNM1P46 0 genome.wustl.edu 37 15 100340097 100340097 + RNA SNP C C T TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 15 100340097 100340097 C T SNP DNM1P46 ENST00000341853 human ensembl 69_37n -1 known rna NULL NULL 0.994 - - - no_errors DNM1P46 HGNC ENSG00000182397 12 0 0.00 8 7 46.67 - - - DNM1P46 0 genome.wustl.edu 37 15 100340123 100340125 + RNA DEL AGA AGA - TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 AGA AGA Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 15 100340123 100340125 AGA - DEL DNM1P46 ENST00000341853 human ensembl 69_37n -1 known rna NULL NULL 0.899:0.883:0.880 - - - no_errors DNM1P46 HGNC ENSG00000182397 9 0 0.00 11 6 35.29 - - - EEF1D 0 genome.wustl.edu 37 8 144662795 144662795 + Missense_Mutation SNP C C T TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 8 144662795 144662795 C T SNP EEF1D ENST00000423316 human ensembl 69_37n -1 known missense c.1591 p.E531K 1.000 pfam_EF-1_beta_acid_region_euk pfam_Transl_elong_fac_EF1B_bsu/dsu,pfam_EF-1_beta_acid_region_euk,superfamily_Transl_elong_fac_EF1B_bsu/dsu,smart_Transl_elong_fac_EF1B_bsu/dsu - no_errors EEF1D HGNC ENSG00000104529 138 0 0.00 86 49 35.77 - - - ERBB2 0 genome.wustl.edu 37 17 37881000 37881000 + Missense_Mutation SNP G G C TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 17 37881000 37881000 G C SNP ERBB2 ENST00000269571 human ensembl 69_37n +1 known missense c.2329 p.V777L 1.000 pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_cat_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom - no_errors ERBB2 HGNC ENSG00000141736 118 0 0.00 77 46 37.40 - - - FBXO18 0 genome.wustl.edu 37 10 5945053 5945053 + Silent SNP G G A TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 10 5945053 5945053 G A SNP FBXO18 ENST00000379999 human ensembl 69_37n +1 known silent c.225 p.V75 0.989 NULL pfam_UvrD-like_ATP-bd,pfam_F-box_dom_cyclin-like,superfamily_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like - no_errors FBXO18 HGNC ENSG00000134452 107 0 0.00 108 23 17.42 - - - GRID2IP 0 genome.wustl.edu 37 7 6541690 6541690 + Silent SNP C C T TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 7 6541690 6541690 C T SNP GRID2IP ENST00000457091 human ensembl 69_37n -1 putative silent c.3210 p.S1070 0.786 pfam_FH2_actin-bd,superfamily_FH2_actin-bd,smart_Actin-bd_FH2/DRF_autoreg pfam_FH2_actin-bd,pfam_PDZ,superfamily_FH2_actin-bd,superfamily_PDZ,smart_PDZ,smart_Actin-bd_FH2/DRF_autoreg,pfscan_PDZ - no_errors GRID2IP HGNC ENSG00000215045 93 0 0.00 99 14 12.28 - - - HECW1 0 genome.wustl.edu 37 7 43484146 43484146 + Missense_Mutation SNP G G T TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 7 43484146 43484146 G T SNP HECW1 ENST00000395891 human ensembl 69_37n +1 known missense c.1375 p.A459S 0.073 NULL pfam_HECT,pfam_WW_Rsp5_WWP,pfam_C2_Ca-dep,superfamily_HECT,superfamily_WW_Rsp5_WWP,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_WW_Rsp5_WWP,smart_HECT,pfscan_HECT,pfscan_C2_membr_targeting,pfscan_WW_Rsp5_WWP - no_errors HECW1 HGNC ENSG00000002746 38 0 0.00 35 15 30.00 - - - HIST2H2BE 0 genome.wustl.edu 37 1 149858180 149858180 + Missense_Mutation SNP G G A TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 1 149858180 149858180 G A SNP HIST2H2BE ENST00000369155 human ensembl 69_37n -1 known missense c.11 p.P4L 0.997 NULL pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B - no_errors HIST2H2BE HGNC ENSG00000184678 287 0 0.00 231 348 60.00 - - - IARS 0 genome.wustl.edu 37 9 95027830 95027830 + Silent SNP T T A TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 9 95027830 95027830 T A SNP IARS ENST00000375643 human ensembl 69_37n -1 known silent c.1437 p.V479 0.628 pfam_aa-tRNA-synth_Ia,tigrfam_Ile-tRNA-synt pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,prints_Ile-tRNA-synt,tigrfam_Ile-tRNA-synt - no_errors IARS HGNC ENSG00000196305 224 0 0.00 267 66 19.82 - - - MAGEA12 0 genome.wustl.edu 37 X 151899975 151899975 + Silent SNP T T G TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a X 151899975 151899975 T G SNP MAGEA12 ENST00000357916 human ensembl 69_37n -1 known silent c.826 p.R276 0.401 pfam_MAGE,pfscan_MAGE pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE - no_errors MAGEA12 HGNC ENSG00000213401 386 0 0.00 366 66 15.21 - - - MAN2A1 0 genome.wustl.edu 37 5 109183450 109183450 + Silent SNP C C T TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 5 109183450 109183450 C T SNP MAN2A1 ENST00000261483 human ensembl 69_37n +1 known silent c.2935 p.L979 1.000 pfam_Glyco_hydro_38_C,superfamily_Glyco_hydro-type_carb-bd pfam_Glyco_hydro_38_core,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Glyco_hydro-type_carb-bd,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom - no_errors MAN2A1 HGNC ENSG00000112893 276 0 0.00 260 107 28.76 - - - MID1 0 genome.wustl.edu 37 X 10534972 10534972 + Missense_Mutation SNP C C T TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a X 10534972 10534972 C T SNP MID1 ENST00000317552 human ensembl 69_37n -1 known missense c.616 p.D206N 1.000 pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin - no_errors MID1 HGNC ENSG00000101871 151 0 0.00 144 38 20.88 - - - OR4S2 0 genome.wustl.edu 37 11 55418854 55418854 + Missense_Mutation SNP G G A TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 11 55418854 55418854 G A SNP OR4S2 ENST00000312422 human ensembl 69_37n +1 known missense c.475 p.A159T 0.000 pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn - no_errors OR4S2 HGNC ENSG00000174982 254 0 0.00 159 96 37.65 - - - PCNT 0 genome.wustl.edu 37 21 47836277 47836277 + Missense_Mutation SNP G G A TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 21 47836277 47836277 G A SNP PCNT ENST00000359568 human ensembl 69_37n +1 known missense c.6445 p.A2149T 0.002 NULL pfam_PACT_domain - no_errors PCNT HGNC ENSG00000160299 130 0 0.00 131 23 14.84 - - - PLEKHA8P1 0 genome.wustl.edu 37 12 45567613 45567613 + RNA SNP C C A TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 12 45567613 45567613 C A SNP PLEKHA8P1 ENST00000256692 human ensembl 69_37n -1 known rna NULL NULL 0.313 - - - no_errors PLEKHA8P1 HGNC ENSG00000134297 385 0 0.00 439 60 11.95 - - - PODN 0 genome.wustl.edu 37 1 53537273 53537273 + Silent SNP C C T TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 1 53537273 53537273 C T SNP PODN ENST00000312553 human ensembl 69_37n +1 known silent c.523 p.L175 1.000 pfam_Leu-rich_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp - no_errors PODN HGNC ENSG00000174348 70 0 0.00 56 15 21.13 - - - PRMT10 0 genome.wustl.edu 37 4 148575485 148575485 + Silent SNP T T C TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 4 148575485 148575485 T C SNP PRMT10 ENST00000322396 human ensembl 69_37n -1 known silent c.1563 p.E521 0.899 NULL pfam_Ribosomal-L11_MeTrfase_PrmA,pfscan_TPR_repeat,pfscan_TPR-contain_dom - no_errors PRMT10 HGNC ENSG00000164169 303 0 0.00 213 113 34.56 - - - RUNX1 0 genome.wustl.edu 37 21 36252958 36252958 + Missense_Mutation SNP C C T TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 21 36252958 36252958 C T SNP RUNX1 ENST00000300305 human ensembl 69_37n -1 known missense c.404 p.G135D 1.000 pfam_AML1/Runt_N,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_AML1/Runt_N,prints_AML1_Runt pfam_AML1/Runt_N,pfam_RunxI,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_AML1/Runt_N,prints_AML1_Runt - no_errors RUNX1 HGNC ENSG00000159216 197 0 0.00 168 85 33.33 - - - SCAP 0 genome.wustl.edu 37 3 47467065 47467065 + Missense_Mutation SNP G G A TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 3 47467065 47467065 G A SNP SCAP ENST00000265565 human ensembl 69_37n -1 known missense c.947 p.A316V 1.000 pfam_Patched,pfscan_SSD pfam_Patched,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_SSD,pfscan_WD40_repeat,pfscan_WD40_repeat_dom - no_errors SCAP HGNC ENSG00000114650 53 0 0.00 58 11 15.71 - - - SLC52A2 0 genome.wustl.edu 37 8 145584130 145584130 + Frame_Shift_Del DEL C C - TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 8 145584130 145584130 C - DEL SLC52A2 ENST00000329994 human ensembl 69_37n +1 known frame_shift_del c.978 p.L327fs 0.994 pfam_Endogenous_retrovirus_rcpt pfam_Endogenous_retrovirus_rcpt - no_errors SLC52A2 HGNC ENSG00000185803 46 0 0.00 35 13 26.53 - - - STARD8 0 genome.wustl.edu 37 X 67940160 67940160 + Silent SNP C C T TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a X 67940160 67940160 C T SNP STARD8 ENST00000374599 human ensembl 69_37n +1 known silent c.1944 p.H648 0.914 NULL pfam_START_lipid-bd,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd,pfscan_START_lipid-bd,pfscan_RhoGAP_dom - no_errors STARD8 HGNC ENSG00000130052 66 0 0.00 62 12 16.22 - - - TRADD 0 genome.wustl.edu 37 16 67190466 67190466 + Missense_Mutation SNP G G A TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 16 67190466 67190466 G A SNP TRADD ENST00000345057 human ensembl 69_37n -1 known missense c.98 p.A33V 0.032 superfamily_TRADD_N pfam_TRADD_N,pfam_Death,superfamily_TRADD_N,superfamily_DEATH-like,smart_Death,pfscan_Death - no_errors TRADD HGNC ENSG00000102871 79 0 0.00 47 10 17.24 - - - VPS35 0 genome.wustl.edu 37 16 46695632 46695632 + Missense_Mutation SNP C C T TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 16 46695632 46695632 C T SNP VPS35 ENST00000299138 human ensembl 69_37n -1 known missense c.2209 p.A737T 1.000 pfam_VPS35,superfamily_ARM-type_fold pfam_VPS35,superfamily_ARM-type_fold - no_errors VPS35 HGNC ENSG00000069329 122 0 0.00 99 35 26.12 - - - VWA7 0 genome.wustl.edu 37 6 31741200 31741200 + Missense_Mutation SNP C C T TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 6 31741200 31741200 C T SNP VWA7 ENST00000375686 human ensembl 69_37n -1 known missense c.736 p.G246R 1.000 NULL NULL - no_errors VWA7 HGNC ENSG00000204396 164 0 0.00 101 61 37.42 - - - YAP1 0 genome.wustl.edu 37 11 102100570 102100570 + Missense_Mutation SNP C C T TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 11 102100570 102100570 C T SNP YAP1 ENST00000282441 human ensembl 69_37n +1 known missense c.1414 p.P472S 1.000 NULL pfam_WW_Rsp5_WWP,superfamily_WW_Rsp5_WWP,smart_WW_Rsp5_WWP,pfscan_WW_Rsp5_WWP - no_errors YAP1 HGNC ENSG00000137693 284 0 0.00 236 49 17.07 - - - YME1L1 0 genome.wustl.edu 37 10 27436575 27436575 + Missense_Mutation SNP G G A TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 10 27436575 27436575 G A SNP YME1L1 ENST00000326799 human ensembl 69_37n -1 known missense c.191 p.T64M 0.039 NULL pfam_Peptidase_M41,pfam_ATPase_AAA_core,smart_AAA+_ATPase,tigrfam_FtsH - no_errors YME1L1 HGNC ENSG00000136758 277 0 0.00 172 116 40.00 - - - ZNF841 0 genome.wustl.edu 37 19 52569331 52569331 + Missense_Mutation SNP A A C TCGA-BH-A0C1-01B-11D-A12B-09 TCGA-BH-A0C1-10A-01D-A12B-09 A A Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx adebc709-8059-43c3-ad0e-a102fa1536ff 5298995d-f21e-48f8-8696-0fb2e192693a 19 52569331 52569331 A C SNP ZNF841 ENST00000389534 human ensembl 69_37n -1 known missense c.1804 p.C602G 0.835 pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2 pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box - no_errors ZNF841 HGNC ENSG00000197608 230 0 0.00 273 48 14.86 - - -