Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID chromosome_name_WU start_WU stop_WU reference_WU variant_WU type_WU gene_name_WU transcript_name_WU transcript_species_WU transcript_source_WU transcript_version_WU strand_WU transcript_status_WU trv_type_WU c_position_WU amino_acid_change_WU ucsc_cons_WU domain_WU all_domains_WU deletion_substructures_WU transcript_error_WU default_gene_name_WU gene_name_source_WU ensembl_gene_id normal_ref_reads normal_var_reads normal_vaf tumor_ref_reads tumors_var_reads tumor_vaf EVS_EA EVS_AA EVS_All CECR2 0 genome.wustl.edu 37 22 17978507 17978507 + Missense_Mutation SNP G G T TCGA-GM-A3XG-01A-31D-A243-09 TCGA-GM-A3XG-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 7e92fbc5-c484-449a-8a40-8d820d6fd64d c1481d6c-531b-4d94-be70-9370c5e53417 22 17978507 17978507 G T SNP CECR2 ENST00000400573 human ensembl 69_37n +1 novel missense c.405 p.W135C 1.000 NULL pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain - no_errors CECR2 HGNC ENSG00000099954 32 0 0.00 31 4 11.43 - - - COG1 0 genome.wustl.edu 37 17 71197882 71197882 + Nonsense_Mutation SNP C C A TCGA-GM-A3XG-01A-31D-A243-09 TCGA-GM-A3XG-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 7e92fbc5-c484-449a-8a40-8d820d6fd64d c1481d6c-531b-4d94-be70-9370c5e53417 17 71197882 71197882 C A SNP COG1 ENST00000299886 human ensembl 69_37n +1 known nonsense c.1916 p.S639* 0.008 NULL pfam_Vps51 - no_errors COG1 HGNC ENSG00000166685 42 0 0.00 35 4 10.26 - - - DCTN5 0 genome.wustl.edu 37 16 23680339 23680339 + RNA SNP G G T TCGA-GM-A3XG-01A-31D-A243-09 TCGA-GM-A3XG-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 7e92fbc5-c484-449a-8a40-8d820d6fd64d c1481d6c-531b-4d94-be70-9370c5e53417 16 23680339 23680339 G T SNP DCTN5 ENST00000563614 human ensembl 69_37n +1 known rna NULL NULL 0.001 - - - no_errors DCTN5 HGNC ENSG00000166847 43 0 0.00 36 4 10.00 - - - FAM208B 0 genome.wustl.edu 37 10 5789185 5789185 + Silent SNP G G T TCGA-GM-A3XG-01A-31D-A243-09 TCGA-GM-A3XG-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 7e92fbc5-c484-449a-8a40-8d820d6fd64d c1481d6c-531b-4d94-be70-9370c5e53417 10 5789185 5789185 G T SNP FAM208B ENST00000328090 human ensembl 69_37n +1 known silent c.3801 p.V1267 0.014 NULL pfam_DUF3715,pfam_DUF3699 - no_errors FAM208B HGNC ENSG00000108021 18 0 0.00 17 4 19.05 - - - LINC00588 0 genome.wustl.edu 37 8 58197243 58197243 + RNA SNP G G C TCGA-GM-A3XG-01A-31D-A243-09 TCGA-GM-A3XG-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 7e92fbc5-c484-449a-8a40-8d820d6fd64d c1481d6c-531b-4d94-be70-9370c5e53417 8 58197243 58197243 G C SNP LINC00588 ENST00000521663 human ensembl 69_37n +1 known rna NULL NULL 0.000 - - - no_errors LINC00588 HGNC ENSG00000215117 8 0 0.00 4 5 55.56 - - - OR4C5 0 genome.wustl.edu 37 11 48387890 48387890 + Missense_Mutation SNP T T C TCGA-GM-A3XG-01A-31D-A243-09 TCGA-GM-A3XG-10A-01D-A243-09 T T Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 7e92fbc5-c484-449a-8a40-8d820d6fd64d c1481d6c-531b-4d94-be70-9370c5e53417 11 48387890 48387890 T C SNP OR4C5 ENST00000319813 human ensembl 69_37n -1 known missense c.128 p.E43G 0.003 NULL pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam - no_errors OR4C5 HGNC ENSG00000176540 35 0 0.00 33 7 17.50 - - - SLC22A16 0 genome.wustl.edu 37 6 110757113 110757113 + Missense_Mutation SNP C C T TCGA-GM-A3XG-01A-31D-A243-09 TCGA-GM-A3XG-10A-01D-A243-09 C C Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 7e92fbc5-c484-449a-8a40-8d820d6fd64d c1481d6c-531b-4d94-be70-9370c5e53417 6 110757113 110757113 C T SNP SLC22A16 ENST00000368919 human ensembl 69_37n -1 known missense c.1363 p.G455R 0.100 pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom - no_errors SLC22A16 HGNC ENSG00000004809 16 0 0.00 17 5 22.73 - - - TMEM104 0 genome.wustl.edu 37 17 72787153 72787153 + Missense_Mutation SNP G G T TCGA-GM-A3XG-01A-31D-A243-09 TCGA-GM-A3XG-10A-01D-A243-09 G G Unknown Untested Somatic Phase_IV WXS none 1 dbGAP Illumina GAIIx 7e92fbc5-c484-449a-8a40-8d820d6fd64d c1481d6c-531b-4d94-be70-9370c5e53417 17 72787153 72787153 G T SNP TMEM104 ENST00000335464 human ensembl 69_37n +1 known missense c.405 p.M135I 1.000 pfam_AA_transpt_TM pfam_AA_transpt_TM - no_errors TMEM104 HGNC ENSG00000109066 22 0 0.00 25 4 13.79 - - -