Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ABCA2	20	genome.wustl.edu	37	9	139915379	139915379	+	Silent	SNP	G	G	T			TCGA-C5-A2LT-01A-11D-A18J-09	TCGA-C5-A2LT-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f6b355e-3898-4be6-be97-da0c3840a4ed	aff606ff-0c62-4adf-b137-275bf4aafa5a	9	139915379	139915379	G	T	SNP	ABCA2	ENST00000265662	human	ensembl	70_37	-1	known	silent	c.1032	p.A344	0.997	NULL	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA2	HGNC
ALG13	79868	genome.wustl.edu	37	X	110988036	110988036	+	Missense_Mutation	SNP	G	G	T			TCGA-C5-A2LT-01A-11D-A18J-09	TCGA-C5-A2LT-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f6b355e-3898-4be6-be97-da0c3840a4ed	aff606ff-0c62-4adf-b137-275bf4aafa5a	X	110988036	110988036	G	T	SNP	ALG13	ENST00000394780	human	ensembl	70_37	+1	putative	missense	c.2836	p.A946S	0.003	NULL	pfam_Glyco_trans_28_C,pfam_OTU,pfscan_OTU,pfscan_Tudor	-	no_errors	ALG13	HGNC
ENSG00000221504	0	genome.wustl.edu	37	19	32417514	32417515	+	RNA	INS	-	-	G			TCGA-C5-A2LT-01A-11D-A18J-09	TCGA-C5-A2LT-10A-01D-A18J-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f6b355e-3898-4be6-be97-da0c3840a4ed	aff606ff-0c62-4adf-b137-275bf4aafa5a	19	32417514	32417515	-	G	INS	ENSG00000221504	ENST00000408577	human	ensembl	70_37	+1	novel	rna	NULL	NULL	0.182:0.173	-	-	-	no_errors	AC011456.1	Clone_based_ensembl_gene
GOLGA6L6	727832	genome.wustl.edu	37	15	20740459	20740461	+	In_Frame_Del	DEL	TCG	TCG	-			TCGA-C5-A2LT-01A-11D-A18J-09	TCGA-C5-A2LT-10A-01D-A18J-09	TCG	TCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f6b355e-3898-4be6-be97-da0c3840a4ed	aff606ff-0c62-4adf-b137-275bf4aafa5a	15	20740459	20740461	TCG	-	DEL	GOLGA6L6	ENST00000427390	human	ensembl	70_37	-1	known	in_frame_del	c.1291_1289	p.AK430in_frame_delE	0.966:0.963:0.960	NULL	superfamily_Ribosomal_L7/12_C/ClpS-like,prints_Tropomyosin	-	no_errors	GOLGA6L6	HGNC
IGFL4	444882	genome.wustl.edu	37	19	46543439	46543439	+	Silent	SNP	G	G	T			TCGA-C5-A2LT-01A-11D-A18J-09	TCGA-C5-A2LT-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f6b355e-3898-4be6-be97-da0c3840a4ed	aff606ff-0c62-4adf-b137-275bf4aafa5a	19	46543439	46543439	G	T	SNP	IGFL4	ENST00000377697	human	ensembl	70_37	-1	known	silent	c.306	p.S102	0.001	NULL	NULL	-	no_errors	IGFL4	HGNC
KCNJ13	3769	genome.wustl.edu	37	2	233633435	233633435	+	Silent	SNP	G	G	T			TCGA-C5-A2LT-01A-11D-A18J-09	TCGA-C5-A2LT-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f6b355e-3898-4be6-be97-da0c3840a4ed	aff606ff-0c62-4adf-b137-275bf4aafa5a	2	233633435	233633435	G	T	SNP	KCNJ13	ENST00000233826	human	ensembl	70_37	-1	known	silent	c.549	p.G183	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir7	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir7,prints_K_chnl_inward-rec_Kir	-	no_errors	KCNJ13	HGNC
PSMD9	5715	genome.wustl.edu	37	12	122353787	122353787	+	Missense_Mutation	SNP	G	G	T			TCGA-C5-A2LT-01A-11D-A18J-09	TCGA-C5-A2LT-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0f6b355e-3898-4be6-be97-da0c3840a4ed	aff606ff-0c62-4adf-b137-275bf4aafa5a	12	122353787	122353787	G	T	SNP	PSMD9	ENST00000541212	human	ensembl	70_37	+1	known	missense	c.581	p.R194L	0.992	superfamily_PDZ,smart_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ	-	no_errors	PSMD9	HGNC