Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
FAM104A	84923	genome.wustl.edu	37	17	71228291	71228291	+	Missense_Mutation	SNP	G	G	C			TCGA-EK-A2RM-01A-21D-A18J-09	TCGA-EK-A2RM-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	801e67c8-c506-410a-bdf0-856a66e974f4	b2a9b6b3-8ae5-4da7-ae2e-02cb5b0390b2	17	71228291	71228291	G	C	SNP	FAM104A	ENST00000405159	human	ensembl	70_37	-1	known	missense	c.155	p.S52C	0.000	NULL	NULL	-	no_errors	FAM104A	HGNC
MUC4	4585	genome.wustl.edu	37	3	195507554	195507554	+	Missense_Mutation	SNP	G	G	C			TCGA-EK-A2RM-01A-21D-A18J-09	TCGA-EK-A2RM-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	801e67c8-c506-410a-bdf0-856a66e974f4	b2a9b6b3-8ae5-4da7-ae2e-02cb5b0390b2	3	195507554	195507554	G	C	SNP	MUC4	ENST00000463781	human	ensembl	70_37	-1	known	missense	c.10897	p.L3633V	0.006	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC
PGCP1	441897	genome.wustl.edu	37	1	111932468	111932468	+	RNA	SNP	G	G	T			TCGA-EK-A2RM-01A-21D-A18J-09	TCGA-EK-A2RM-10A-01D-A18J-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	801e67c8-c506-410a-bdf0-856a66e974f4	b2a9b6b3-8ae5-4da7-ae2e-02cb5b0390b2	1	111932468	111932468	G	T	SNP	PGCP1	ENST00000411951	human	ensembl	70_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PGCP1	HGNC