Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source
ABCA2	20	genome.wustl.edu	37	9	139907932	139907932	+	Missense_Mutation	SNP	C	C	T			TCGA-MY-A5BF-01A-11D-A26G-09	TCGA-MY-A5BF-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	aa95dabb-5ce6-4379-a7be-300ceaedbd5c	e1dd766d-8d09-4066-b1fa-535efff9dd32	9	139907932	139907932	C	T	SNP	ABCA2	ENST00000265662	human	ensembl	70_37	-1	known	missense	c.4531	p.E1511K	1.000	NULL	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA2	HGNC
LEFTY2	7044	genome.wustl.edu	37	1	226127176	226127176	+	Silent	SNP	G	G	A			TCGA-MY-A5BF-01A-11D-A26G-09	TCGA-MY-A5BF-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	aa95dabb-5ce6-4379-a7be-300ceaedbd5c	e1dd766d-8d09-4066-b1fa-535efff9dd32	1	226127176	226127176	G	A	SNP	LEFTY2	ENST00000366820	human	ensembl	70_37	-1	known	silent	c.622	p.L208	0.972	pfam_TGF-b_N,pirsf_LRDF,prints_LRDF	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,pirsf_LRDF,prints_LRDF	-	no_errors	LEFTY2	HGNC
NR1H2	7376	genome.wustl.edu	37	19	50881965	50881965	+	Missense_Mutation	SNP	C	C	T			TCGA-MY-A5BF-01A-11D-A26G-09	TCGA-MY-A5BF-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	aa95dabb-5ce6-4379-a7be-300ceaedbd5c	e1dd766d-8d09-4066-b1fa-535efff9dd32	19	50881965	50881965	C	T	SNP	NR1H2	ENST00000253727	human	ensembl	70_37	+1	known	missense	c.659	p.T220I	0.504	superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Liver_X_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Ecdystd_rcpt,prints_ThyrH_rcpt	-	no_errors	NR1H2	HGNC
NYX	60506	genome.wustl.edu	37	X	41333611	41333611	+	Missense_Mutation	SNP	C	C	T			TCGA-MY-A5BF-01A-11D-A26G-09	TCGA-MY-A5BF-10A-01D-A26G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	aa95dabb-5ce6-4379-a7be-300ceaedbd5c	e1dd766d-8d09-4066-b1fa-535efff9dd32	X	41333611	41333611	C	T	SNP	NYX	ENST00000342595	human	ensembl	70_37	+1	known	missense	c.905	p.S302L	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	NYX	HGNC
RNASEL	6041	genome.wustl.edu	37	1	182555093	182555093	+	Silent	SNP	G	G	C			TCGA-MY-A5BF-01A-11D-A26G-09	TCGA-MY-A5BF-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	aa95dabb-5ce6-4379-a7be-300ceaedbd5c	e1dd766d-8d09-4066-b1fa-535efff9dd32	1	182555093	182555093	G	C	SNP	RNASEL	ENST00000367559	human	ensembl	70_37	-1	known	silent	c.849	p.L283	0.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_KEN_RNase_activator,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Ankyrin_rpt-contain_dom,superfamily_Kinase-like_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_PUG-dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_cat_dom,prints_Ankyrin_rpt	-	no_errors	RNASEL	HGNC
SH2B1	25970	genome.wustl.edu	37	16	28877740	28877740	+	Missense_Mutation	SNP	G	G	C			TCGA-MY-A5BF-01A-11D-A26G-09	TCGA-MY-A5BF-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	aa95dabb-5ce6-4379-a7be-300ceaedbd5c	e1dd766d-8d09-4066-b1fa-535efff9dd32	16	28877740	28877740	G	C	SNP	SH2B1	ENST00000322610	human	ensembl	70_37	+1	known	missense	c.325	p.E109Q	1.000	NULL	pfam_Phe_ZIP,pfam_Pleckstrin_homology,pfam_SH2,superfamily_Phe_ZIP,smart_Pleckstrin_homology,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SH2B1	HGNC
TMEM237	65062	genome.wustl.edu	37	2	202501582	202501582	+	Missense_Mutation	SNP	G	G	C			TCGA-MY-A5BF-01A-11D-A26G-09	TCGA-MY-A5BF-10A-01D-A26G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	aa95dabb-5ce6-4379-a7be-300ceaedbd5c	e1dd766d-8d09-4066-b1fa-535efff9dd32	2	202501582	202501582	G	C	SNP	TMEM237	ENST00000409883	human	ensembl	70_37	-1	known	missense	c.163	p.Q55E	0.627	NULL	NULL	-	no_errors	TMEM237	HGNC