Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer TranscriptID Exon ChromChange AAChange COSMIC_Codon COSMIC_Gene Drug_Target DIP2C 22982 broad.mit.edu 36 10 402273 402274 + Frame_Shift_Ins INS - CA CA novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014974 exon19 c.2210_2211insTG p.A737fs . . . HPS6 79803 broad.mit.edu 36 10 103816242 103816242 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024747 exon1 c.C1021T p.Q341X . . . PCGF6 84108 broad.mit.edu 36 10 105100533 105100533 + Missense_Mutation SNP T G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032154 exon1 c.A281C p.E94A . . . PDCD11 22984 broad.mit.edu 36 10 105193712 105193712 + Silent SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014976 exon34 c.A5175G p.K1725K . . . CELF2 10659 broad.mit.edu 36 10 11410993 11410993 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001025077 exon13 c.C1498T p.R500C . . . KIAA1598 57698 broad.mit.edu 36 10 118677294 118677294 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018330 exon11 c.C1111T p.R371X . . . MTG1 92170 broad.mit.edu 36 10 135066208 135066208 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138384 exon9 c.C693T p.V231V . . . SPAG6 9576 broad.mit.edu 36 10 22718117 22718117 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012443 exon7 c.C875T p.A292V . . . ARHGAP21 57584 broad.mit.edu 36 10 24948937 24948937 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020824 exon9 c.G1893A p.T631T . . . RET 5979 broad.mit.edu 36 10 42916069 42916069 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020975 exon2 c.G230A p.R77H . . . C10orf72 196740 broad.mit.edu 36 10 49955300 49955300 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001031746 exon4 c.C604A p.Q202K . . . SLC18A3 6572 broad.mit.edu 36 10 50490296 50490296 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003055 exon1 c.C1504T p.R502C . . . DKK1 22943 broad.mit.edu 36 10 53744737 53744737 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012242 exon2 c.G292A p.A98T . . . C10orf18 54906 broad.mit.edu 36 10 5828203 5828203 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017782 exon15 c.C2813T p.S938L . . . C10orf18 54906 broad.mit.edu 36 10 5830763 5830763 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017782 exon15 c.C5373T p.H1791H . . . BICC1 80114 broad.mit.edu 36 10 60258561 60258561 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080512 exon21 c.G2829A p.S943S . . . CCAR1 55749 broad.mit.edu 36 10 70186090 70186090 + Silent SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018237 exon14 c.T1680C p.R560R . . . SFMBT2 57713 broad.mit.edu 36 10 7254570 7254570 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001029880 exon18 c.G2044A p.D682N . . . ANXA7 310 broad.mit.edu 36 10 74809685 74809685 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001156 exon11 c.C1123T p.R375C . . . GATA3 2625 broad.mit.edu 36 10 8146010 8146010 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002051 exon4 c.G824A p.R275Q . . . LARP4B 23185 broad.mit.edu 36 10 848909 848909 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015155 exon17 c.G2174A p.R725H LARP5,central_nervous_system,brain,Substitution - Missense,0 . . WAPAL 23063 broad.mit.edu 36 10 88196004 88196004 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015045 exon16 c.G3297T p.E1099D . . . CYP26A1 1592 broad.mit.edu 36 10 94824583 94824583 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_057157 exon3 c.G265A p.E89K . . . RBP4 5950 broad.mit.edu 36 10 95350230 95350230 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006744 exon4 c.G265A p.A89T . . . FRA10AC1 118924 broad.mit.edu 36 10 95442410 95442410 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_145246 exon6 c.C363T p.D121D . . . CYP2C19 1557 broad.mit.edu 36 10 96602485 96602485 + Missense_Mutation SNP C T T rs56337013 unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000769 exon9 c.C1297T p.R433W . . . CPXM2 119587 broad.mit.edu 36 10 125641019 125641020 + Frame_Shift_Del DEL GC - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 GC GC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198148 exon1 c.146_147del p.49_49del . . . FBXO18 84893 broad.mit.edu 36 10 5977150 5977150 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032807 exon2 c.148delG p.A50fs . . . H2AFY2 55506 broad.mit.edu 36 10 71521671 71521671 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018649 exon4 c.432delG p.K144fs . . . GATA3 2625 broad.mit.edu 36 10 8140458 8140458 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002051 exon3 c.426delG p.S142fs . . . TNKS2 80351 broad.mit.edu 36 10 93591926 93591926 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_025235 exon16 c.1857delA p.T619fs . . . VWA5A 4013 broad.mit.edu 36 11 123513162 123513163 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014622 exon14 c.1856_1857insA p.P619fs . . . OSBPL5 114879 broad.mit.edu 36 11 3082027 3082028 + In_Frame_Ins INS - GTC GTC novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001144063 exon9 c.1012_1013insGAC p.Y338delinsDY . . . MUC6 4588 broad.mit.edu 36 11 1005851 1005851 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005961 exon31 c.G6950A p.R2317Q . . . BIRC3 330 broad.mit.edu 36 11 101711996 101711996 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_182962 exon8 c.G1414A p.G472R . . . MMP12 4321 broad.mit.edu 36 11 102247847 102247847 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002426 exon3 c.C396T p.Y132Y . . . AASDHPPT 60496 broad.mit.edu 36 11 105472792 105472792 + Missense_Mutation SNP A T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015423 exon6 c.A878T p.D293V . . . BCO2 83875 broad.mit.edu 36 11 111593761 111593761 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001037290 exon12 c.C1592A p.P531H . . . SIDT2 51092 broad.mit.edu 36 11 116569836 116569836 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001040455 exon24 c.G2269A p.V757M . . . DSCAML1 57453 broad.mit.edu 36 11 116894556 116894556 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020693 exon7 c.G1525A p.V509M . . . DSCAML1 57453 broad.mit.edu 36 11 117156562 117156562 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020693 exon2 c.C400T p.R134W . . . DDX6 1656 broad.mit.edu 36 11 118139156 118139156 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004397 exon7 c.A716G p.H239R . . . VPS11 55823 broad.mit.edu 36 11 118453963 118453963 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021729 exon10 c.G1737A p.A579A . . . SC5DL 6309 broad.mit.edu 36 11 120683325 120683325 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006918 exon5 c.C794T p.P265L . . . OR10G9 219870 broad.mit.edu 36 11 123399513 123399513 + Missense_Mutation SNP A T T rs55884373 unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001001953 exon1 c.A584T p.E195V . . . CDON 50937 broad.mit.edu 36 11 125353470 125353470 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016952 exon18 c.G3295A p.A1099T . . . CDON 50937 broad.mit.edu 36 11 125359050 125359050 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016952 exon16 c.C2922T p.G974G . . . ARHGAP32 9743 broad.mit.edu 36 11 128355801 128355801 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014715 exon8 c.G744A p.L248L . . . ADAMTS8 11095 broad.mit.edu 36 11 129792071 129792071 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007037 exon3 c.C1070T p.A357V . . . USH1C 10083 broad.mit.edu 36 11 17487586 17487586 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_153676 exon18 c.C1906T p.R636C . . . E2F8 79733 broad.mit.edu 36 11 19202912 19202912 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024680 exon13 c.C2473T p.R825C . . . NAV2 89797 broad.mit.edu 36 11 20027247 20027247 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001111018 exon15 c.G4108A p.A1370T . . . SLC6A5 9152 broad.mit.edu 36 11 20579598 20579598 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004211 exon2 c.G351A p.A117A . . . NELL1 4745 broad.mit.edu 36 11 21091716 21091716 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006157 exon13 c.G1306A p.D436N . . . IFITM1 8519 broad.mit.edu 36 11 304196 304196 + Missense_Mutation SNP C G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003641 exon1 c.C26G p.A9G . . . OR51A4 401666 broad.mit.edu 36 11 4924701 4924701 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001005329 exon1 c.C206T p.A69V . . . OR5AS1 219447 broad.mit.edu 36 11 55554989 55554989 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001001921 exon1 c.C519T p.I173I . . . OR8K3 219473 broad.mit.edu 36 11 55842833 55842833 + Missense_Mutation SNP G C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001005202 exon1 c.G475C p.V159L . . . TMEM132A 54972 broad.mit.edu 36 11 60457671 60457671 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017870 exon8 c.C1441T p.R481C . . . CD6 923 broad.mit.edu 36 11 60535183 60535183 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006725 exon6 c.G1150T p.E384X . . . C11orf9 745 broad.mit.edu 36 11 61295776 61295776 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_013279 exon6 c.C942T p.H314H . . . BEST1 7439 broad.mit.edu 36 11 61475909 61475909 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004183 exon2 c.C55T p.R19C . . . RELA 5970 broad.mit.edu 36 11 65183713 65183713 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021975 exon6 c.C559T p.R187C . . . NPAS4 266743 broad.mit.edu 36 11 65948094 65948094 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_178864 exon7 c.C1157A p.A386E . . . CTSF 8722 broad.mit.edu 36 11 66090410 66090410 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003793 exon5 c.C649T p.R217X . . . RBM4 5936 broad.mit.edu 36 11 66163916 66163916 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001198843 exon2 c.G158A p.R53H . . . C11orf80 79703 broad.mit.edu 36 11 66362459 66362459 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024650 exon15 c.G1714A p.A572T . . . DEAF1 10522 broad.mit.edu 36 11 668761 668761 + Silent SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021008 exon9 c.C1188A p.G396G . . . CPT1A 1374 broad.mit.edu 36 11 68281750 68281750 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001876 exon19 c.C2260A p.L754M . . . PPFIA1 8500 broad.mit.edu 36 11 69867590 69867590 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003626 exon15 c.G1875A p.A625A . . . DHCR7 1717 broad.mit.edu 36 11 70829964 70829964 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001360 exon6 c.G583A p.A195T . . . ARHGEF17 9828 broad.mit.edu 36 11 72756365 72756365 + Silent SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014786 exon21 c.T6084C p.S2028S . . . PLEKHB1 58473 broad.mit.edu 36 11 73044563 73044563 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021200 exon6 c.G458A p.R153H . . . RAB6A 5870 broad.mit.edu 36 11 73107517 73107517 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002869 exon4 c.C250T p.R84C . . . WNT11 7481 broad.mit.edu 36 11 75575879 75575879 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004626 exon5 c.G943A p.G315R . . . GRM5 2915 broad.mit.edu 36 11 87882273 87882273 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000842 exon9 c.G2678T p.R893L . . . AMOTL1 154810 broad.mit.edu 36 11 94173019 94173019 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_130847 exon3 c.C1015A p.P339T . . . WEE1 7465 broad.mit.edu 36 11 9555272 9555272 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001143976 exon5 c.G385A p.A129T . . . WEE1 7465 broad.mit.edu 36 11 9566618 9566618 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001143976 exon11 c.G1192A p.A398T . . . NLRX1 79671 broad.mit.edu 36 11 118559843 118559843 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_170722 exon10 c.2710delC p.P904fs . . . STT3A 3703 broad.mit.edu 36 11 124977948 124977948 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152713 exon5 c.312delT p.H104fs . . . SF1 7536 broad.mit.edu 36 11 64297493 64297493 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_201998 exon3 c.221delC p.P74fs . . . TBC1D10C 374403 broad.mit.edu 36 11 66933141 66933141 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198517 exon9 c.954delC p.I318fs . . . MYO7A 4647 broad.mit.edu 36 11 76551609 76551609 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001127179 exon14 c.1617delC p.I539fs . . . NAALAD2 10003 broad.mit.edu 36 11 89525296 89525296 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005467 exon6 c.792delA p.A264fs . . . SWAP70 23075 broad.mit.edu 36 11 9728051 9728052 + Frame_Shift_Del DEL AG - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 AG AG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015055 exon12 c.1716_1717del p.572_573del . . . CHD4 1108 broad.mit.edu 36 12 6562299 6562300 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001273 exon28 c.4212_4213insT p.L1404fs . . . WSCD2 9671 broad.mit.edu 36 12 107158397 107158397 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014653 exon8 c.C1291T p.R431C . . . ANAPC7 51434 broad.mit.edu 36 12 109305119 109305119 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001137664 exon7 c.C949T p.R317X . . . C12orf51 283450 broad.mit.edu 36 12 111152996 111152996 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001109662 exon39 c.C5698T p.R1900C . . . OAS3 4940 broad.mit.edu 36 12 111863793 111863793 + Silent SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006187 exon2 c.T213C p.G71G . . . TPCN1 53373 broad.mit.edu 36 12 112195777 112195777 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017901 exon10 c.C863A p.P288H . . . PRB2 653247 broad.mit.edu 36 12 11437334 11437334 + Silent SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006248 exon3 c.T945C p.P315P . . . PXN 5829 broad.mit.edu 36 12 119136160 119136160 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_025157 exon10 c.C876T p.D292D . . . ORAI1 84876 broad.mit.edu 36 12 120563436 120563436 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032790 exon2 c.C416T p.A139V . . . NCOR2 9612 broad.mit.edu 36 12 123398734 123398734 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006312 exon31 c.G3945A p.K1315K . . . SCARB1 949 broad.mit.edu 36 12 123845728 123845728 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005505 exon9 c.C1168T p.L390L . . . PIWIL1 9271 broad.mit.edu 36 12 129405481 129405481 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004764 exon11 c.C1267T p.R423X . . . RIMBP2 23504 broad.mit.edu 36 12 129501790 129501790 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015347 exon5 c.G356A p.R119Q . . . PUS1 80324 broad.mit.edu 36 12 130991806 130991806 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_025215 exon5 c.G561A p.T187T . . . NOC4L 79050 broad.mit.edu 36 12 131195386 131195386 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024078 exon2 c.G152A p.R51H . . . IQSEC3 440073 broad.mit.edu 36 12 137110 137110 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001170738 exon7 c.G2432A p.R811Q . . . GUCY2C 2984 broad.mit.edu 36 12 14705210 14705210 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004963 exon11 c.C1336T p.L446F . . . ART4 420 broad.mit.edu 36 12 14885198 14885198 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021071 exon2 c.C301T p.H101Y . . . CACNA2D4 93589 broad.mit.edu 36 12 1789996 1789996 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_172364 exon28 c.C2632T p.P878S . . . PIK3C2G 5288 broad.mit.edu 36 12 18692212 18692212 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004570 exon32 c.G4321T p.G1441X . . . DCP1B 196513 broad.mit.edu 36 12 1932611 1932611 + Missense_Mutation SNP C G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152640 exon7 c.G756C p.Q252H . . . SLCO1B1 10599 broad.mit.edu 36 12 21218811 21218811 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006446 exon4 c.T260C p.F87S . . . GYS2 2998 broad.mit.edu 36 12 21607193 21607193 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021957 exon7 c.G988T p.G330W . . . FKBP4 2288 broad.mit.edu 36 12 2778183 2778183 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002014 exon4 c.C444T p.G148G . . . EFCAB4B 84766 broad.mit.edu 36 12 3633681 3633681 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001144959 exon10 c.G1004A p.S335N . . . PRPF40B 25766 broad.mit.edu 36 12 48323802 48323802 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001031698 exon23 c.G2379A p.S793S . . . LIMA1 51474 broad.mit.edu 36 12 48902367 48902367 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001113546 exon4 c.G334A p.A112T . . . CSRNP2 81566 broad.mit.edu 36 12 49743915 49743915 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_030809 exon5 c.C1513T p.P505S . . . KRT75 9119 broad.mit.edu 36 12 51111679 51111679 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004693 exon4 c.C785T p.A262V . . . KRT4 3851 broad.mit.edu 36 12 51487840 51487840 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002272 exon7 c.C1423T p.R475C . . . NCKAP1L 3071 broad.mit.edu 36 12 53199016 53199016 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001184976 exon15 c.G1322A p.R441H . . . GDF11 10220 broad.mit.edu 36 12 54429829 54429829 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005811 exon3 c.C1120A p.P374T . . . TMEM194A 23306 broad.mit.edu 36 12 55744220 55744220 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015257 exon5 c.G436A p.V146I . . . LRP1 4035 broad.mit.edu 36 12 55889767 55889767 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002332 exon80 c.C12288T p.D4096D . . . ARHGEF25 115557 broad.mit.edu 36 12 56295321 56295321 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001111270 exon12 c.G1112A p.R371H . . . GRIP1 23426 broad.mit.edu 36 12 65051961 65051961 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001178074 exon21 c.C2591T p.S864L . . . CHD4 1108 broad.mit.edu 36 12 6567312 6567312 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001273 exon24 c.G3530A p.R1177H . . . GPR162 27239 broad.mit.edu 36 12 6804104 6804104 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_019858 exon2 c.C779T p.S260L . . . OSBPL8 114882 broad.mit.edu 36 12 75276717 75276717 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020841 exon22 c.C2334T p.S778S . . . E2F7 144455 broad.mit.edu 36 12 75951861 75951861 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_203394 exon8 c.G1216T p.A406S . . . LRRIQ1 84125 broad.mit.edu 36 12 83975025 83975025 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032165 exon8 c.G2323T p.A775S . . . PHC1 1911 broad.mit.edu 36 12 8963637 8963637 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004426 exon3 c.C133T p.R45W . . . PHC1 1911 broad.mit.edu 36 12 8981122 8981122 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004426 exon13 c.G2561A p.R854H . . . ANKS1B 56899 broad.mit.edu 36 12 98693516 98693516 + Missense_Mutation SNP T A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152788 exon7 c.A902T p.D301V . . . PRB3 5544 broad.mit.edu 36 12 11312202 11312202 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006249 exon3 c.248delC p.P83fs . . . OR6C4 341418 broad.mit.edu 36 12 54232206 54232206 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001005494 exon1 c.929delA p.X310 . . . B4GALNT1 2583 broad.mit.edu 36 12 56311370 56311370 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001478 exon3 c.263delG p.G88fs . . . C1R 715 broad.mit.edu 36 12 7133151 7133151 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001733 exon5 c.647delC p.P216fs . . . ARL11 115761 broad.mit.edu 36 13 49102776 49102777 + Frame_Shift_Ins INS - G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138450 exon2 c.192_193insG p.V64fs . . . TPP2 7174 broad.mit.edu 36 13 102086709 102086709 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003291 exon13 c.C1644T p.G548G . . . SLC10A2 6555 broad.mit.edu 36 13 102499789 102499789 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000452 exon5 c.C770T p.T257M . . . MYO16 23026 broad.mit.edu 36 13 108257038 108257038 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001198950 exon7 c.C752T p.A251V . . . TUBGCP3 10426 broad.mit.edu 36 13 112248127 112248127 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006322 exon11 c.G1222T p.D408Y . . . PABPC3 5042 broad.mit.edu 36 13 24569009 24569009 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_030979 exon1 c.G673A p.D225N . . . ELF1 1997 broad.mit.edu 36 13 40454123 40454123 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_172373 exon2 c.G68A p.R23Q . . . SLITRK1 114798 broad.mit.edu 36 13 83353352 83353352 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_052910 exon1 c.G292A p.V98I . . . LNX2 222484 broad.mit.edu 36 13 27034655 27034655 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_153371 exon5 c.1119delG p.G373fs . . . CKAP2 26586 broad.mit.edu 36 13 51947035 51947035 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001098525 exon9 c.1810delA p.K604fs . . . DACH1 1602 broad.mit.edu 36 13 71338862 71338862 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_080759 exon1 c.47delC p.P16fs . . . AHNAK2 113146 broad.mit.edu 36 14 104478072 104478072 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138420 exon7 c.G14761A p.G4921S . . . PCK2 5106 broad.mit.edu 36 14 23642572 23642572 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004563 exon10 c.G1482A p.M494I . . . RNF31 55072 broad.mit.edu 36 14 23696446 23696446 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017999 exon15 c.C2601T p.N867N . . . TM9SF1 10548 broad.mit.edu 36 14 23732004 23732004 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001014842 exon3 c.G657A p.R219R . . . PRKD1 5587 broad.mit.edu 36 14 29169911 29169911 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002742 exon10 c.C1460T p.A487V . . . NID2 22795 broad.mit.edu 36 14 51547458 51547458 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007361 exon18 c.C3608T p.T1203M . . . KIAA0586 9786 broad.mit.edu 36 14 58019127 58019127 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014749 exon20 c.G2860T p.G954C . . . PSEN1 5663 broad.mit.edu 36 14 72710095 72710095 + Missense_Mutation SNP C T T rs41345849 unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000021 exon5 c.C407T p.A136V . . . YLPM1 56252 broad.mit.edu 36 14 74300631 74300631 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_019589 exon1 c.A686G p.Q229R . . . FOXN3 1112 broad.mit.edu 36 14 88698965 88698965 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001085471 exon7 c.C1019A p.A340D . . . OR11H6 122748 broad.mit.edu 36 14 19762072 19762072 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001004480 exon1 c.364delT p.F122fs . . . ADCY4 196883 broad.mit.edu 36 14 23873666 23873666 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001198592 exon2 c.33delC p.P11fs . . . ARHGAP5 394 broad.mit.edu 36 14 31632296 31632296 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001030055 exon2 c.2670delT p.D890fs . . . FOXN3 1112 broad.mit.edu 36 14 88948287 88948287 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001085471 exon2 c.287delC p.P96fs . . . C15orf2 23742 broad.mit.edu 36 15 22472554 22472554 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018958 exon1 c.C447T p.T149T . . . ATP10A 57194 broad.mit.edu 36 15 23510122 23510122 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024490 exon10 c.C2136T p.C712C . . . TRPM1 4308 broad.mit.edu 36 15 29081917 29081917 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002420 exon27 c.G4212A p.T1404T . . . TRPM1 4308 broad.mit.edu 36 15 29146655 29146655 + Missense_Mutation SNP A C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002420 exon5 c.T455G p.L152W . . . OTUD7A 161725 broad.mit.edu 36 15 29563821 29563821 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_130901 exon11 c.G1749A p.P583P . . . RASGRP1 10125 broad.mit.edu 36 15 36592332 36592332 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005739 exon7 c.C793T p.R265C . . . C15orf53 400359 broad.mit.edu 36 15 36777916 36777916 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_207444 exon2 c.C418T p.R140X . . . JMJD7-PLA2G4B 8681 broad.mit.edu 36 15 39921031 39921031 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005090 exon12 c.G1153A p.V385I . . . SLC24A5 283652 broad.mit.edu 36 15 46200562 46200562 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_205850 exon1 c.C29T p.A10V . . . FBN1 2200 broad.mit.edu 36 15 46553757 46553757 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000138 exon34 c.C4197T p.G1399G . . . ATP8B4 79895 broad.mit.edu 36 15 48060754 48060754 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024837 exon11 c.G778A p.G260S . . . UNC13C 440279 broad.mit.edu 36 15 52379829 52379829 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080534 exon11 c.C4234T p.R1412C . . . DIS3L 115752 broad.mit.edu 36 15 64393480 64393480 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001143688 exon6 c.G785A p.R262Q . . . C15orf60 283677 broad.mit.edu 36 15 71635772 71635772 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001042367 exon5 c.C623T p.T208M . . . SIN3A 25942 broad.mit.edu 36 15 73471856 73471856 + Silent SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001145358 exon15 c.A2631G p.R877R . . . MORF4L1 10933 broad.mit.edu 36 15 76971667 76971667 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006791 exon8 c.C497T p.P166L . . . WHAMM 123720 broad.mit.edu 36 15 81296833 81296833 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080435 exon9 c.C2070T p.C690C . . . C15orf55 256646 broad.mit.edu 36 15 32435137 32435137 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_175741 exon7 c.1552delG p.G518fs . . . BBS4 585 broad.mit.edu 36 15 70816938 70816939 + Frame_Shift_Del DEL AA - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 AA AA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033028 exon16 c.1517_1518del p.506_506del . . . SYNM 23336 broad.mit.edu 36 15 97488430 97488430 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015286 exon4 c.2341delG p.G781fs . . . WDR90 197335 broad.mit.edu 36 16 646011 646012 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . ATF7IP2 80063 broad.mit.edu 36 16 10474868 10474868 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024997 exon8 c.C1458T p.S486S . . . MYH11 4629 broad.mit.edu 36 16 15746510 15746510 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001040114 exon21 c.C2518T p.Q840X . . . HBQ1 3049 broad.mit.edu 36 16 170982 170982 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005331 exon3 c.C304T p.L102L . . . ITPRIPL2 162073 broad.mit.edu 36 16 19033454 19033454 + Missense_Mutation SNP T A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001034841 exon1 c.T170A p.L57H . . . PDILT 204474 broad.mit.edu 36 16 20293686 20293686 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_174924 exon5 c.C640T p.R214C . . . ACSM2B 348158 broad.mit.edu 36 16 20459556 20459556 + Missense_Mutation SNP G C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001105069 exon13 c.C1550G p.S517C . . . DNAH3 55567 broad.mit.edu 36 16 20904252 20904252 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017539 exon48 c.G7313A p.S2438N . . . PRKCB 5579 broad.mit.edu 36 16 24099741 24099741 + Silent SNP C T T rs17847876 unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_212535 exon13 c.C1524T p.I508I . . . AQP8 343 broad.mit.edu 36 16 25136223 25136223 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001169 exon2 c.C216T p.H72H . . . ZKSCAN2 342357 broad.mit.edu 36 16 25165807 25165807 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001012981 exon5 c.A1211G p.Y404C . . . GTF3C1 2975 broad.mit.edu 36 16 27380226 27380226 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001520 exon37 c.G6276A p.R2092R . . . SEZ6L2 26470 broad.mit.edu 36 16 29814660 29814660 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_201575 exon4 c.C534T p.S178S . . . CCDC64B 146439 broad.mit.edu 36 16 3020998 3020998 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001103175 exon2 c.G437T p.R146L . . . ZNF689 115509 broad.mit.edu 36 16 30523812 30523812 + Missense_Mutation SNP T G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138447 exon3 c.A777C p.K259N . . . SRCAP 10847 broad.mit.edu 36 16 30642456 30642456 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006662 exon25 c.C4210T p.P1404S . . . SLX4 84464 broad.mit.edu 36 16 3598569 3598569 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032444 exon2 c.C398T p.P133L . . . SHCBP1 79801 broad.mit.edu 36 16 45207463 45207463 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024745 exon4 c.G492T p.E164D . . . SEPT12 124404 broad.mit.edu 36 16 4773465 4773465 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144605 exon7 c.G725A p.R242Q . . . CBLN1 869 broad.mit.edu 36 16 47872398 47872398 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004352 exon2 c.G321A p.P107P . . . SLC12A3 6559 broad.mit.edu 36 16 55475498 55475498 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000339 exon14 c.C1706T p.A569V . . . CIAPIN1 57019 broad.mit.edu 36 16 56023921 56023921 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020313 exon6 c.C609T p.N203N . . . GPR97 222487 broad.mit.edu 36 16 56264836 56264836 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_170776 exon2 c.G161A p.C54Y . . . CDH16 1014 broad.mit.edu 36 16 65506663 65506663 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004062 exon6 c.C544T p.L182L . . . B3GNT9 84752 broad.mit.edu 36 16 65741106 65741106 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033309 exon2 c.C784T p.R262W . . . CDH1 999 broad.mit.edu 36 16 67403623 67403623 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004360 exon8 c.G1093A p.V365I CDH1,stomach,NS,Substitution - Missense,0 . . DHX38 9785 broad.mit.edu 36 16 70687741 70687741 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014003 exon2 c.C184T p.R62X . . . DHX38 9785 broad.mit.edu 36 16 70688314 70688314 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014003 exon3 c.G416A p.R139Q . . . ZFHX3 463 broad.mit.edu 36 16 71551076 71551076 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006885 exon2 c.G470T p.C157F . . . MON1B 22879 broad.mit.edu 36 16 75785073 75785073 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014940 exon3 c.C373T p.R125W . . . MTHFSD 64779 broad.mit.edu 36 16 85145813 85145813 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022764 exon2 c.T59C p.M20T . . . C16orf68 79091 broad.mit.edu 36 16 8630141 8630141 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024109 exon3 c.G187T p.G63X . . . GALNS 2588 broad.mit.edu 36 16 87429248 87429248 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000512 exon8 c.G772A p.V258I . . . ANKRD11 29123 broad.mit.edu 36 16 87884635 87884635 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_013275 exon6 c.G500A p.R167H . . . USP7 7874 broad.mit.edu 36 16 8896449 8896449 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003470 exon28 c.G2979A p.A993A . . . ARL2BP 23568 broad.mit.edu 36 16 55836792 55836794 + In_Frame_Del DEL AGA - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 AGA AGA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012106 exon1 c.12_14del p.4_5del . . . ARL2BP 23568 broad.mit.edu 36 16 55843642 55843644 + In_Frame_Del DEL TCT - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 TCT TCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012106 exon6 c.454_456del p.152_152del . . . CCDC79 283847 broad.mit.edu 36 16 65377255 65377255 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001136505 exon9 c.635delA p.N212fs . . . ZC3H18 124245 broad.mit.edu 36 16 87218642 87218642 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144604 exon12 c.2030delC p.T677fs . . . CCDC47 57003 broad.mit.edu 36 17 59197120 59197121 + Frame_Shift_Ins INS - AG AG novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020198 exon2 c.148_149insCT p.V50fs . . . MYH4 4622 broad.mit.edu 36 17 10294519 10294519 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017533 exon30 c.G4157A p.R1386H . . . DNAH9 1770 broad.mit.edu 36 17 11725344 11725344 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001372 exon55 c.G10695A p.E3565E . . . YWHAE 7531 broad.mit.edu 36 17 1250123 1250123 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006761 exon1 c.C32T p.A11V . . . MYOCD 93649 broad.mit.edu 36 17 12549182 12549182 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001146312 exon2 c.G68T p.R23I . . . PRPF8 10594 broad.mit.edu 36 17 1503996 1503996 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006445 exon38 c.G6052A p.A2018T . . . SLC13A2 9058 broad.mit.edu 36 17 23840372 23840372 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001145975 exon2 c.C116T p.A39V . . . KIAA0664 23277 broad.mit.edu 36 17 2548072 2548072 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015229 exon10 c.C1715T p.P572L . . . KIAA0664 23277 broad.mit.edu 36 17 2551527 2551527 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015229 exon6 c.G668A p.W223X . . . ATAD5 79915 broad.mit.edu 36 17 26220495 26220495 + Silent SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024857 exon13 c.T3417C p.T1139T . . . RHBDL3 162494 broad.mit.edu 36 17 27672112 27672112 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138328 exon9 c.C966T p.A322A . . . OR1E2 8388 broad.mit.edu 36 17 3283459 3283459 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003554 exon1 c.G427A p.A143T . . . MED1 5469 broad.mit.edu 36 17 34824881 34824881 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004774 exon16 c.G1423A p.V475M . . . PSMD3 5709 broad.mit.edu 36 17 35396453 35396453 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002809 exon3 c.G511A p.V171M . . . THRA 7067 broad.mit.edu 36 17 35498168 35498168 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_199334 exon8 c.G871A p.G291S . . . TNS4 84951 broad.mit.edu 36 17 35905933 35905933 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032865 exon2 c.C271A p.P91T . . . JUP 3728 broad.mit.edu 36 17 37172902 37172902 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021991 exon8 c.G1356A p.T452T . . . MPP3 4356 broad.mit.edu 36 17 39234747 39234747 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001932 exon20 c.G1606A p.A536T . . . MPP2 4355 broad.mit.edu 36 17 39312819 39312819 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005374 exon11 c.C1210T p.R404C . . . ADAM11 4185 broad.mit.edu 36 17 40211122 40211122 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002390 exon25 c.G2262A p.T754T . . . NFE2L1 4779 broad.mit.edu 36 17 43491912 43491912 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003204 exon6 c.C2229T p.A743A . . . DLX3 1747 broad.mit.edu 36 17 45424043 45424043 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005220 exon3 c.C701T p.P234L . . . COL1A1 1277 broad.mit.edu 36 17 45619272 45619272 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000088 exon48 c.G3542A p.G1181D . . . COL1A1 1277 broad.mit.edu 36 17 45621143 45621143 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000088 exon42 c.G3058A p.A1020T . . . ANKRD40 91369 broad.mit.edu 36 17 46132973 46132973 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_052855 exon2 c.C238T p.P80S . . . NLRP1 22861 broad.mit.edu 36 17 5364926 5364926 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033004 exon14 c.A3914G p.K1305R . . . TEX14 56155 broad.mit.edu 36 17 53998117 53998117 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198393 exon28 c.C4074T p.G1358G . . . TEX14 56155 broad.mit.edu 36 17 54031294 54031294 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198393 exon14 c.G2411T p.G804V . . . RNFT1 51136 broad.mit.edu 36 17 55395363 55395363 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016125 exon2 c.A121G p.N41D . . . RGS9 8787 broad.mit.edu 36 17 60630831 60630831 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003835 exon15 c.C1153T p.R385C . . . CACNG4 27092 broad.mit.edu 36 17 62444823 62444823 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014405 exon2 c.G277A p.D93N . . . SDK2 54549 broad.mit.edu 36 17 68909821 68909821 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001144952 exon19 c.C2539T p.P847S . . . NAT9 26151 broad.mit.edu 36 17 70280734 70280734 + Missense_Mutation SNP G C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015654 exon4 c.C230G p.A77G . . . OTOP3 347741 broad.mit.edu 36 17 70449318 70449318 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_178233 exon2 c.C309T p.G103G . . . DLG4 1742 broad.mit.edu 36 17 7052256 7052256 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001128827 exon2 c.G57A p.T19T . . . NUP85 79902 broad.mit.edu 36 17 70732865 70732865 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024844 exon8 c.C670T p.P224S . . . SLC2A4 6517 broad.mit.edu 36 17 7130503 7130503 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001042 exon11 c.C1361T p.A454V . . . EVPL 2125 broad.mit.edu 36 17 71530158 71530158 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001988 exon5 c.C537T p.I179I . . . KCTD11 147040 broad.mit.edu 36 17 7197187 7197187 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001002914 exon1 c.C202T p.P68S . . . RHBDF2 79651 broad.mit.edu 36 17 71979525 71979525 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024599 exon19 c.G2356A p.A786T . . . CYTH1 9267 broad.mit.edu 36 17 74187948 74187948 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017456 exon12 c.G1034A p.R345Q . . . USP36 57602 broad.mit.edu 36 17 74326426 74326426 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_025090 exon10 c.G941A p.R314H . . . RNF213 57674 broad.mit.edu 36 17 75936141 75936141 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020914 exon30 c.C9558T p.R3186R . . . CSNK1D 1453 broad.mit.edu 36 17 77806637 77806637 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_139062 exon3 c.G293T p.R98M . . . MYH10 4628 broad.mit.edu 36 17 8319959 8319959 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005964 exon41 c.G5819A p.R1940Q . . . MYH10 4628 broad.mit.edu 36 17 8392783 8392783 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005964 exon9 c.G937T p.G313C . . . ABR 29 broad.mit.edu 36 17 860763 860763 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021962 exon20 c.C2192A p.P731Q . . . PIK3R6 146850 broad.mit.edu 36 17 8682631 8682631 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001010855 exon4 c.G164A p.R55H . . . MYO15A 51168 broad.mit.edu 36 17 17992572 17992572 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016239 exon31 c.6729delG p.T2243fs . . . RHOT1 55288 broad.mit.edu 36 17 27553979 27553979 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001033566 exon15 c.1279delA p.K427fs . . . ABCA5 23461 broad.mit.edu 36 17 64814507 64814507 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_172232 exon6 c.742delA p.I248X . . . THOC1 9984 broad.mit.edu 36 18 255347 255348 + Frame_Shift_Ins INS - T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005131 exon3 c.145_146insA p.C49fs . . . APCDD1 147495 broad.mit.edu 36 18 10475592 10475592 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_153000 exon4 c.G908A p.R303H . . . C18orf8 29919 broad.mit.edu 36 18 19340951 19340951 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_013326 exon3 c.G199A p.V67M . . . LAMA3 3909 broad.mit.edu 36 18 19661335 19661335 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198129 exon23 c.C2729T p.A910V . . . RNF138 51444 broad.mit.edu 36 18 27926846 27926846 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016271 exon2 c.G109A p.V37I . . . CELF4 56853 broad.mit.edu 36 18 33104743 33104743 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001025089 exon8 c.T1055C p.I352T . . . LIPG 9388 broad.mit.edu 36 18 45355931 45355931 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006033 exon5 c.G766A p.D256N . . . MBD1 4152 broad.mit.edu 36 18 46056075 46056075 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015847 exon7 c.C538T p.R180W . . . SMAD4 4089 broad.mit.edu 36 18 46858663 46858663 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005359 exon12 c.G1487A p.R496H SMAD4,thyroid,NS,Substitution - Missense,0 . . DCC 1630 broad.mit.edu 36 18 48686643 48686643 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005215 exon3 c.G644A p.R215Q . . . C18orf54 162681 broad.mit.edu 36 18 50152868 50152868 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173529 exon6 c.C878A p.P293H . . . ALPK2 115701 broad.mit.edu 36 18 54397868 54397868 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_052947 exon4 c.T1120C p.C374R . . . CDH20 28316 broad.mit.edu 36 18 57372512 57372512 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_031891 exon11 c.C2010T p.G670G . . . RNF152 220441 broad.mit.edu 36 18 57634529 57634529 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173557 exon2 c.C148T p.R50W . . . CNDP2 55748 broad.mit.edu 36 18 70327114 70327114 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018235 exon5 c.G427A p.A143T . . . TSHZ1 10194 broad.mit.edu 36 18 71129127 71129127 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005786 exon2 c.G2642T p.R881M . . . SALL3 27164 broad.mit.edu 36 18 74854452 74854452 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_171999 exon2 c.G1473A p.V491V . . . KIAA0802 23255 broad.mit.edu 36 18 8773876 8773876 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015210 exon6 c.G766A p.A256T . . . C18orf19 125228 broad.mit.edu 36 18 13671751 13671751 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152352 exon2 c.326delA p.K109fs . . . SMAD4 4089 broad.mit.edu 36 18 46827503 46827504 + Frame_Shift_Del DEL GA - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 GA GA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005359 exon2 c.89_90del p.30_30del . . . VASP 7408 broad.mit.edu 36 19 50717451 50717452 + Frame_Shift_Ins INS - C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003370 exon6 c.492_493insC p.A164fs . . . IL11 3589 broad.mit.edu 36 19 60572042 60572043 + Frame_Shift_Ins INS - G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000641 exon2 c.87_88insC p.P29fs . . . LDLR 3949 broad.mit.edu 36 19 11071922 11071922 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001195802 exon2 c.G91A p.D31N . . . MUM1 84939 broad.mit.edu 36 19 1318212 1318212 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032853 exon9 c.C1418T p.T473M . . . OR1I1 126370 broad.mit.edu 36 19 15059536 15059536 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001004713 exon1 c.C660T p.R220R . . . NOTCH3 4854 broad.mit.edu 36 19 15152543 15152543 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000435 exon19 c.C3091T p.R1031C . . . AKAP8 10270 broad.mit.edu 36 19 15326891 15326891 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005858 exon14 c.C1914T p.G638G . . . TPM4 7171 broad.mit.edu 36 19 16059892 16059892 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001145160 exon5 c.C548T p.A183V . . . UPF1 5976 broad.mit.edu 36 19 18829311 18829311 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002911 exon15 c.C2151T p.Y717Y . . . HAPLN4 404037 broad.mit.edu 36 19 19232710 19232710 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_023002 exon3 c.C396T p.N132N . . . MAU2 23383 broad.mit.edu 36 19 19320985 19320985 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015329 exon15 c.C1380T p.A460A . . . MAU2 23383 broad.mit.edu 36 19 19326238 19326238 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015329 exon17 c.G1623A p.S541S . . . APLP1 333 broad.mit.edu 36 19 41057510 41057510 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001024807 exon10 c.C1243T p.R415C . . . ZNF382 84911 broad.mit.edu 36 19 41810016 41810016 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032825 exon5 c.G1377A p.T459T . . . ZNF420 147923 broad.mit.edu 36 19 42310803 42310803 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144689 exon5 c.A1070G p.H357R . . . RYR1 6261 broad.mit.edu 36 19 43642982 43642982 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001042723 exon20 c.C2488T p.R830W . . . PAK4 10298 broad.mit.edu 36 19 44360909 44360909 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001014834 exon8 c.G1167A p.S389S . . . MAP3K10 4294 broad.mit.edu 36 19 45390254 45390254 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002446 exon1 c.C476T p.A159V . . . NUMBL 9253 broad.mit.edu 36 19 45878757 45878757 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004756 exon6 c.C445T p.P149S . . . HNRNPUL1 11100 broad.mit.edu 36 19 46503495 46503495 + Silent SNP A T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144732 exon14 c.A2037T p.P679P . . . MEGF8 1954 broad.mit.edu 36 19 47531127 47531127 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001410 exon4 c.C659A p.A220D . . . BCL3 602 broad.mit.edu 36 19 49954634 49954634 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005178 exon9 c.C1287T p.P429P . . . FOXA3 3171 broad.mit.edu 36 19 51067800 51067800 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004497 exon2 c.G697A p.G233R . . . PNMAL1 55228 broad.mit.edu 36 19 51665057 51665057 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018215 exon2 c.C1076T p.A359V . . . STRN4 29888 broad.mit.edu 36 19 51917359 51917359 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001039877 exon15 c.G2006A p.R669H . . . CTU1 90353 broad.mit.edu 36 19 56294198 56294198 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_145232 exon3 c.C519T p.A173A . . . HAS1 3036 broad.mit.edu 36 19 56912226 56912226 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001523 exon3 c.G735T p.M245I . . . ZNF578 147660 broad.mit.edu 36 19 57706279 57706279 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001099694 exon6 c.G833A p.R278H . . . ZNF611 81856 broad.mit.edu 36 19 57900942 57900942 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001161501 exon5 c.C971T p.T324I . . . LENG8 114823 broad.mit.edu 36 19 59661335 59661335 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_052925 exon15 c.G2063A p.R688Q . . . BRSK1 84446 broad.mit.edu 36 19 60506972 60506972 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032430 exon12 c.C1252T p.R418X . . . CCDC106 29903 broad.mit.edu 36 19 60852421 60852421 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_013301 exon3 c.G70A p.D24N . . . ZNF470 388566 broad.mit.edu 36 19 61780763 61780763 + Missense_Mutation SNP G C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001001668 exon6 c.G1154C p.R385P . . . ZNF264 9422 broad.mit.edu 36 19 62414609 62414609 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003417 exon4 c.G332A p.G111E . . . CLPP 8192 broad.mit.edu 36 19 6312602 6312602 + Nonsense_Mutation SNP T A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006012 exon1 c.T17A p.L6X . . . VAV1 7409 broad.mit.edu 36 19 6724006 6724006 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005428 exon1 c.G188A p.R63H . . . MUC16 94025 broad.mit.edu 36 19 8866698 8866698 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024690 exon46 c.C39708T p.D13236D . . . MUC16 94025 broad.mit.edu 36 19 8879507 8879507 + Missense_Mutation SNP T G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024690 exon24 c.A37667C p.K12556T . . . MUC16 94025 broad.mit.edu 36 19 8919926 8919926 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024690 exon3 c.C28520T p.T9507M . . . ZNF317 57693 broad.mit.edu 36 19 9132878 9132878 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001190791 exon6 c.G1461A p.T487T . . . ABCA7 10347 broad.mit.edu 36 19 1008947 1008949 + In_Frame_Del DEL CTT - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 CTT CTT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_019112 exon36 c.4914_4916del p.1638_1639del . . . OR7C1 26664 broad.mit.edu 36 19 14771414 14771414 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198944 exon1 c.535delT p.C179fs . . . ZNF676 163223 broad.mit.edu 36 19 22156163 22156163 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001001411 exon3 c.196delA p.M66X . . . TLE2 7089 broad.mit.edu 36 19 2962087 2962087 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001144762 exon10 c.579delC p.P193fs . . . FAM187B 148109 broad.mit.edu 36 19 40407924 40407924 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152481 exon2 c.754delC p.L252X . . . PSG3 5671 broad.mit.edu 36 19 47936357 47936357 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021016 exon1 c.20delC p.P7fs . . . ERCC2 2068 broad.mit.edu 36 19 50565266 50565268 + In_Frame_Del DEL AGG - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 AGG AGG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000400 exon2 c.68_70del p.23_24del . . . CCDC9 26093 broad.mit.edu 36 19 52466546 52466546 + Frame_Shift_Del DEL C - - rs35119724 byFrequency TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015603 exon12 c.1367delC p.A456fs . . . GLTSCR1 29998 broad.mit.edu 36 19 52889380 52889380 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015711 exon8 c.2480delC p.A827fs . . . TBC1D17 79735 broad.mit.edu 36 19 55077419 55077419 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001168222 exon6 c.649delC p.P217fs . . . EPN1 29924 broad.mit.edu 36 19 60894996 60894996 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001130072 exon7 c.827delG p.W276fs . . . C3 718 broad.mit.edu 36 19 6645575 6645575 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000064 exon24 c.3021delC p.P1007fs . . . PKN2 5586 broad.mit.edu 36 1 89044072 89044073 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq . . . . . . . S1PR1 1901 broad.mit.edu 36 1 101477927 101477927 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001400 exon2 c.G799A p.A267T . . . KIAA1324 57535 broad.mit.edu 36 1 109535906 109535906 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020775 exon13 c.G1581A p.T527T . . . AMIGO1 57463 broad.mit.edu 36 1 109852950 109852950 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020703 exon2 c.C108T p.A36A . . . KCNA10 3744 broad.mit.edu 36 1 110862199 110862199 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005549 exon1 c.G734T p.R245M . . . MTOR 2475 broad.mit.edu 36 1 11221106 11221106 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004958 exon12 c.G1942A p.A648T . . . KCND3 3752 broad.mit.edu 36 1 112326702 112326702 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004980 exon2 c.C170T p.T57M . . . CAPZA1 829 broad.mit.edu 36 1 113014263 113014263 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006135 exon10 c.A847G p.M283V . . . IGSF3 3321 broad.mit.edu 36 1 116947841 116947841 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001542 exon7 c.C1612T p.R538W . . . ADAM30 11085 broad.mit.edu 36 1 120238715 120238715 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021794 exon1 c.G1768T p.G590C . . . TNFRSF8 943 broad.mit.edu 36 1 12092775 12092775 + Silent SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001243 exon6 c.C603A p.A201A . . . PDE4DIP 9659 broad.mit.edu 36 1 143586100 143586100 + Missense_Mutation SNP T A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001198832 exon33 c.A4733T p.D1578V . . . TUFT1 7286 broad.mit.edu 36 1 149818785 149818785 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020127 exon11 c.G961A p.A321T . . . TCHH 7062 broad.mit.edu 36 1 150350642 150350642 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007113 exon2 c.G1675A p.E559K . . . LCE1B 353132 broad.mit.edu 36 1 151051666 151051666 + Silent SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_178349 exon1 c.C120A p.V40V . . . SPRR1A 6698 broad.mit.edu 36 1 151224536 151224536 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005987 exon2 c.T206C p.V69A . . . KAZ 23254 broad.mit.edu 36 1 15255180 15255180 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_201628 exon5 c.C733T p.Q245X . . . CHRNB2 1141 broad.mit.edu 36 1 152810625 152810625 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000748 exon5 c.G702A p.P234P . . . C1orf104 284618 broad.mit.edu 36 1 153557849 153557849 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001039517 exon2 c.C55T p.R19W . . . IQGAP3 128239 broad.mit.edu 36 1 154798285 154798285 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_178229 exon10 c.A1010G p.Q337R . . . NES 10763 broad.mit.edu 36 1 154909901 154909901 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006617 exon3 c.C951T p.G317G . . . OR6K3 391114 broad.mit.edu 36 1 156953900 156953900 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001005327 exon1 c.C630T p.F210F . . . IGSF9 57549 broad.mit.edu 36 1 158179414 158179414 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001135050 exon3 c.C210T p.F70F . . . ATP1A4 480 broad.mit.edu 36 1 158411014 158411014 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144699 exon15 c.G2164T p.G722C . . . ATP1A4 480 broad.mit.edu 36 1 158422777 158422777 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144699 exon21 c.G3057A p.P1019P . . . NUF2 83540 broad.mit.edu 36 1 161584340 161584340 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_031423 exon12 c.G1112A p.R371H . . . TADA1 117143 broad.mit.edu 36 1 165105657 165105657 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_053053 exon2 c.C133A p.L45I . . . C1orf156 92342 broad.mit.edu 36 1 168029359 168029359 + Silent SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033418 exon2 c.A102G p.S34S . . . TNR 7143 broad.mit.edu 36 1 173599491 173599491 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003285 exon13 c.C2683T p.R895X . . . PADI3 51702 broad.mit.edu 36 1 17475609 17475609 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016233 exon12 c.G1316A p.G439D . . . ASTN1 460 broad.mit.edu 36 1 175130501 175130501 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004319 exon17 c.C2760T p.S920S . . . GLT25D2 23127 broad.mit.edu 36 1 182174720 182174720 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015101 exon12 c.C1679T p.T560M . . . CFH 3075 broad.mit.edu 36 1 194915525 194915525 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000186 exon6 c.C769T p.R257C . . . LRRN2 10446 broad.mit.edu 36 1 202854568 202854568 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_201630 exon2 c.G1176A p.P392P . . . LRRN2 10446 broad.mit.edu 36 1 202855609 202855609 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_201630 exon2 c.G135A p.S45S . . . PM20D1 148811 broad.mit.edu 36 1 204068438 204068438 + Missense_Mutation SNP A T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152491 exon11 c.T1196A p.V399D . . . CAMK1G 57172 broad.mit.edu 36 1 207840067 207840067 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020439 exon3 c.C209T p.A70V . . . LAMB3 3914 broad.mit.edu 36 1 207869862 207869862 + Silent SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001017402 exon9 c.T975C p.C325C . . . DDOST 1650 broad.mit.edu 36 1 20853318 20853318 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005216 exon7 c.C830T p.A277V . . . USH2A 7399 broad.mit.edu 36 1 214486898 214486898 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_206933 exon13 c.G2461A p.V821I . . . MARK1 4139 broad.mit.edu 36 1 218901779 218901779 + Missense_Mutation SNP G C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018650 exon18 c.G2036C p.S679T . . . HLX 3142 broad.mit.edu 36 1 219122278 219122278 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021958 exon3 c.C922A p.Q308K . . . HSPG2 3339 broad.mit.edu 36 1 22056403 22056403 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005529 exon43 c.G5356A p.G1786R . . . EPHX1 2052 broad.mit.edu 36 1 224099586 224099586 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001136018 exon9 c.G1283A p.R428H . . . GJC2 57165 broad.mit.edu 36 1 226412854 226412854 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020435 exon2 c.G772A p.V258M . . . OBSCN 84033 broad.mit.edu 36 1 226534740 226534740 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_052843 exon29 c.T7901C p.V2634A . . . URB2 9816 broad.mit.edu 36 1 227838747 227838747 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014777 exon4 c.G1764A p.P588P . . . NID1 4811 broad.mit.edu 36 1 234243367 234243367 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002508 exon11 c.C2371T p.P791S . . . ZP4 57829 broad.mit.edu 36 1 236115332 236115332 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021186 exon8 c.G1142A p.W381X . . . FMN2 56776 broad.mit.edu 36 1 238436982 238436982 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020066 exon5 c.G2247A p.T749T . . . C1orf101 257044 broad.mit.edu 36 1 242790664 242790664 + Missense_Mutation SNP G C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173807 exon10 c.G1101C p.K367N . . . OR11L1 391189 broad.mit.edu 36 1 246071275 246071275 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001001959 exon1 c.C547T p.P183S . . . RHCE 6006 broad.mit.edu 36 1 25607913 25607913 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138617 exon2 c.C183T p.G61G . . . FAM46B 115572 broad.mit.edu 36 1 27211535 27211535 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_052943 exon1 c.G214A p.G72R . . . SYTL1 84958 broad.mit.edu 36 1 27552365 27552365 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032872 exon14 c.G1312A p.V438M . . . MAP3K6 9064 broad.mit.edu 36 1 27561758 27561758 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004672 exon8 c.G1216A p.G406R . . . CD164L2 388611 broad.mit.edu 36 1 27581643 27581643 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_207397 exon2 c.G190A p.V64M . . . MECR 51102 broad.mit.edu 36 1 29405931 29405931 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001024732 exon4 c.C252T p.S84S . . . TSSK3 81629 broad.mit.edu 36 1 32602005 32602005 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_052841 exon2 c.G368A p.R123H . . . THRAP3 9967 broad.mit.edu 36 1 36524719 36524719 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005119 exon4 c.C301T p.R101X . . . THRAP3 9967 broad.mit.edu 36 1 36542078 36542078 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005119 exon12 c.G2741A p.R914Q . . . GRIK3 2899 broad.mit.edu 36 1 37040233 37040233 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000831 exon16 c.C2566T p.R856C . . . RIMS3 9783 broad.mit.edu 36 1 40880130 40880130 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014747 exon3 c.C55T p.R19W . . . KIAA0467 23334 broad.mit.edu 36 1 43672693 43672693 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015284 exon26 c.C3157T p.Q1053X . . . PTCH2 8643 broad.mit.edu 36 1 45080168 45080168 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001166292 exon2 c.C203A p.A68D . . . CYP4A22 284541 broad.mit.edu 36 1 47379180 47379180 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001010969 exon2 c.G337T p.D113Y . . . ZFYVE9 9372 broad.mit.edu 36 1 52476664 52476664 + Silent SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007324 exon4 c.T987C p.T329T . . . ZCCHC11 23318 broad.mit.edu 36 1 52764180 52764180 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001009881 exon2 c.G361A p.A121T . . . SLC1A7 6512 broad.mit.edu 36 1 53329029 53329029 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006671 exon8 c.G1069T p.E357X . . . C1orf177 163747 broad.mit.edu 36 1 55052096 55052096 + Missense_Mutation SNP A T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001110533 exon7 c.A784T p.M262L . . . JAK1 3716 broad.mit.edu 36 1 65089117 65089117 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002227 exon12 c.C1713T p.S571S . . . SLC44A5 204962 broad.mit.edu 36 1 75577864 75577864 + Missense_Mutation SNP A T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152697 exon4 c.T92A p.V31D . . . LMO4 8543 broad.mit.edu 36 1 87577879 87577879 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006769 exon3 c.G309A p.A103A . . . GBP4 115361 broad.mit.edu 36 1 89429540 89429540 + Missense_Mutation SNP G C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_052941 exon6 c.C908G p.T303S . . . ARHGAP29 9411 broad.mit.edu 36 1 94412221 94412221 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004815 exon23 c.G3578T p.G1193V . . . RBM15 64783 broad.mit.edu 36 1 110686274 110686274 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022768 exon1 c.2724delG p.V908fs . . . EPHA2 1969 broad.mit.edu 36 1 16334786 16334786 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004431 exon6 c.1379delC p.P460fs . . . FAM163A 148753 broad.mit.edu 36 1 178049836 178049836 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173509 exon5 c.393delG p.E131fs . . . CEP350 9857 broad.mit.edu 36 1 178319877 178319877 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014810 exon31 c.6226delA p.K2076fs . . . PPP1R12B 4660 broad.mit.edu 36 1 200673813 200673813 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001167857 exon10 c.1496delT p.V499fs . . . PLEKHA6 22874 broad.mit.edu 36 1 202495034 202495034 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014935 exon8 c.982delG p.V328fs . . . HLX 3142 broad.mit.edu 36 1 219124482 219124484 + In_Frame_Del DEL GCG - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 GCG GCG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021958 exon4 c.1280_1282del p.427_428del . . . CHRM3 1131 broad.mit.edu 36 1 238139067 238139067 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000740 exon5 c.1693delA p.K565fs . . . OR14I1 401994 broad.mit.edu 36 1 246912228 246912228 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001004734 exon1 c.1delA p.M1fs . . . RLF 6018 broad.mit.edu 36 1 40469833 40469833 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012421 exon7 c.1005delT p.T335fs . . . RPL22 6146 broad.mit.edu 36 1 6169439 6169439 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000983 exon4 c.267delA p.K89fs . . . LHX8 431707 broad.mit.edu 36 1 75381522 75381523 + Frame_Shift_Del DEL GA - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 GA GA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001001933 exon6 c.521_522del p.174_174del . . . ZNF644 84146 broad.mit.edu 36 1 91178920 91178920 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_201269 exon3 c.579delA p.K193fs . . . NECAB3 63941 broad.mit.edu 36 20 31709462 31709462 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_031232 exon11 c.T1109C p.I370T . . . SPAG4 6676 broad.mit.edu 36 20 33668503 33668503 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003116 exon2 c.G336A p.E112E . . . SPEF1 25876 broad.mit.edu 36 20 3707903 3707903 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015417 exon3 c.G318A p.P106P . . . STK4 6789 broad.mit.edu 36 20 43040519 43040519 + Missense_Mutation SNP A C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006282 exon3 c.A138C p.K46N . . . ZNF334 55713 broad.mit.edu 36 20 44566683 44566683 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018102 exon3 c.A125G p.N42S . . . NCOA3 8202 broad.mit.edu 36 20 45696211 45696211 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001174087 exon10 c.G977A p.G326D . . . RASSF2 9770 broad.mit.edu 36 20 4719236 4719236 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_170774 exon6 c.T398C p.L133P . . . SNAI1 6615 broad.mit.edu 36 20 48037932 48037932 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005985 exon3 c.C727T p.R243W . . . TMEM189-UBE2V1 387522 broad.mit.edu 36 20 48132737 48132737 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021988 exon4 c.C488T p.P163L . . . TSHZ2 128553 broad.mit.edu 36 20 51304247 51304247 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173485 exon2 c.C843T p.G281G . . . ZNF217 7764 broad.mit.edu 36 20 51625762 51625762 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006526 exon3 c.T2948C p.V983A . . . DOK5 55816 broad.mit.edu 36 20 52693498 52693498 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018431 exon7 c.G830A p.S277N . . . TCFL5 10732 broad.mit.edu 36 20 60962013 60962013 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006602 exon2 c.C740T p.A247V . . . DIDO1 11083 broad.mit.edu 36 20 60983600 60983600 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001193369 exon16 c.T4153C p.Y1385H . . . DIDO1 11083 broad.mit.edu 36 20 61009146 61009146 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022105 exon5 c.C1172T p.A391V . . . N6AMT1 29104 broad.mit.edu 36 21 29176411 29176411 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_182749 exon3 c.G254A p.C85Y . . . KRTAP24-1 643803 broad.mit.edu 36 21 30576858 30576858 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001085455 exon1 c.G264A p.P88P . . . DOPEY2 9980 broad.mit.edu 36 21 36574514 36574514 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005128 exon31 c.A6031G p.N2011D . . . BRWD1 54014 broad.mit.edu 36 21 39530498 39530498 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033656 exon23 c.C2659T p.R887X . . . DSCAM 1826 broad.mit.edu 36 21 40345891 40345891 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001389 exon30 c.G5049A p.T1683T . . . PRDM15 63977 broad.mit.edu 36 21 42164798 42164798 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022115 exon4 c.T415C p.S139P . . . UMODL1 89766 broad.mit.edu 36 21 42420890 42420890 + De_novo_Start_InFrame SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001199527 exon19 c.C3738T p.N1246N . . . ADARB1 104 broad.mit.edu 36 21 45427028 45427028 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015834 exon6 c.C1179T p.C393C . . . TPTE 7179 broad.mit.edu 36 21 9973153 9973153 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_199259 exon9 c.C376T p.R126X TPTE,breast,NS,Substitution - Missense,+1 . . CACNG2 10369 broad.mit.edu 36 22 35290349 35290350 + Frame_Shift_Ins INS - G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006078 exon4 c.967_968insC p.V323fs . . . OR11H1 81061 broad.mit.edu 36 22 14829559 14829559 + Silent SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001005239 exon1 c.C246A p.S82S . . . CCT8L2 150160 broad.mit.edu 36 22 15452856 15452856 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014406 exon1 c.C585T p.D195D . . . XKR3 150165 broad.mit.edu 36 22 15645116 15645116 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_175878 exon4 c.C773T p.A258V . . . GAB4 128954 broad.mit.edu 36 22 15825746 15825746 + Silent SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001037814 exon8 c.C1386A p.T462T . . . LZTR1 8216 broad.mit.edu 36 22 19676606 19676606 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006767 exon10 c.G1097A p.G366D . . . LZTR1 8216 broad.mit.edu 36 22 19681533 19681533 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006767 exon21 c.C2419T p.P807S . . . GSTT1 2952 broad.mit.edu 36 22 22714226 22714226 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000853 exon1 c.C6T p.G2G . . . SGSM1 129049 broad.mit.edu 36 22 23585786 23585786 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001098497 exon9 c.G905A p.G302E . . . TPST2 8459 broad.mit.edu 36 22 25262286 25262286 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001008566 exon4 c.C1009A p.P337T . . . AP1B1 162 broad.mit.edu 36 22 28085936 28085936 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001166019 exon4 c.C156T p.P52P . . . EIF4ENIF1 56478 broad.mit.edu 36 22 30174168 30174168 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_019843 exon13 c.C1819T p.R607C . . . RASD2 23551 broad.mit.edu 36 22 34272848 34272848 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014310 exon2 c.G46A p.A16T . . . NCF4 4689 broad.mit.edu 36 22 35593388 35593388 + Missense_Mutation SNP T G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_013416 exon4 c.T280G p.Y94D . . . IL2RB 3560 broad.mit.edu 36 22 35868449 35868449 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000878 exon4 c.G253A p.A85T . . . C22orf23 84645 broad.mit.edu 36 22 36679024 36679024 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032561 exon2 c.C79A p.P27T . . . ADSL 158 broad.mit.edu 36 22 39088981 39088981 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000026 exon10 c.C1061T p.T354M . . . L3MBTL2 83746 broad.mit.edu 36 22 39935835 39935835 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_031488 exon2 c.C214T p.L72F . . . A4GALT 53947 broad.mit.edu 36 22 41419080 41419080 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017436 exon3 c.C822T p.R274R . . . FAM118A 55007 broad.mit.edu 36 22 44102559 44102559 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001104595 exon5 c.G473A p.R158Q . . . MYO1B 4430 broad.mit.edu 36 2 191963281 191963282 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001130158 exon18 c.1800_1801insA p.D600fs . . . SPHKAP 80309 broad.mit.edu 36 2 228568644 228568645 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001142644 exon8 c.4459_4460insT p.D1487_T1488delinsX . . . LONRF2 164832 broad.mit.edu 36 2 100269870 100269870 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198461 exon11 c.C2008T p.R670C . . . CHST10 9486 broad.mit.edu 36 2 100380954 100380954 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004854 exon5 c.G275T p.C92F . . . SLC9A2 6549 broad.mit.edu 36 2 102648232 102648232 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003048 exon3 c.G995A p.G332D . . . GCC2 9648 broad.mit.edu 36 2 108482532 108482532 + Missense_Mutation SNP A C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_181453 exon22 c.A4874C p.Q1625P . . . DPP10 57628 broad.mit.edu 36 2 116265207 116265207 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001178036 exon19 c.C1462A p.L488I . . . SCTR 6344 broad.mit.edu 36 2 119968510 119968510 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002980 exon2 c.C157T p.Q53X . . . NCKAP5 344148 broad.mit.edu 36 2 133199767 133199767 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_207481 exon17 c.C1659T p.S553S . . . THSD7B 80731 broad.mit.edu 36 2 137530536 137530536 + De_novo_Start_OutOfFrame SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080427 exon2 c.C123T p.D41D . . . RIF1 55183 broad.mit.edu 36 2 151981371 151981371 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001177664 exon5 c.T331C p.S111P . . . NR4A2 4929 broad.mit.edu 36 2 156893290 156893290 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006186 exon4 c.G866A p.R289H . . . DPP4 1803 broad.mit.edu 36 2 162583554 162583554 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001935 exon16 c.C1351T p.P451S . . . OSBPL6 114880 broad.mit.edu 36 2 178968430 178968430 + Silent SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032523 exon25 c.T2703C p.V901V . . . DFNB59 494513 broad.mit.edu 36 2 179031587 179031587 + Silent SNP G C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001042702 exon5 c.G654C p.L218L . . . OSGEPL1 64172 broad.mit.edu 36 2 190327152 190327152 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022353 exon4 c.C774T p.H258H . . . DNAH7 56171 broad.mit.edu 36 2 196560044 196560044 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018897 exon14 c.T1745C p.V582A . . . GTF3C3 9330 broad.mit.edu 36 2 197366009 197366009 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012086 exon3 c.G327A p.E109E . . . AOX1 316 broad.mit.edu 36 2 201159088 201159088 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001159 exon1 c.G12A p.A4A . . . FZD7 8324 broad.mit.edu 36 2 202608326 202608326 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003507 exon1 c.C711T p.G237G . . . NRP2 8828 broad.mit.edu 36 2 206318787 206318787 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_201266 exon10 c.C1714T p.R572W . . . ZDBF2 57683 broad.mit.edu 36 2 206882725 206882725 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020923 exon5 c.C5228T p.P1743L . . . IGFBP5 3488 broad.mit.edu 36 2 217267708 217267708 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000599 exon1 c.C36T p.A12A . . . TNS1 7145 broad.mit.edu 36 2 218391514 218391514 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022648 exon24 c.G3474A p.P1158P . . . ZNF142 7701 broad.mit.edu 36 2 219221935 219221935 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001105537 exon6 c.C940T p.R314W . . . PTPRN 5798 broad.mit.edu 36 2 219869462 219869462 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001199764 exon17 c.G2061A p.M687I . . . PTPRN 5798 broad.mit.edu 36 2 219873195 219873195 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001199764 exon9 c.A922G p.T308A . . . SLC4A3 6508 broad.mit.edu 36 2 220212622 220212622 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005070 exon20 c.C3198T p.A1066A . . . DOCK10 55619 broad.mit.edu 36 2 225343219 225343219 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014689 exon55 c.C6397T p.H2133Y . . . SP140 11262 broad.mit.edu 36 2 230842883 230842883 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007237 exon14 c.C1415T p.T472M . . . DNAJB3 414061 broad.mit.edu 36 2 234317210 234317210 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001001394 exon1 c.A92G p.H31R . . . ASB18 401036 broad.mit.edu 36 2 236837572 236837572 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_212556 exon1 c.C156T p.D52D . . . MFSD2B 388931 broad.mit.edu 36 2 24100066 24100066 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080473 exon12 c.G1279A p.A427T . . . MEMO1 51072 broad.mit.edu 36 2 32010648 32010648 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015955 exon3 c.G204A p.P68P . . . COLEC11 78989 broad.mit.edu 36 2 3669284 3669284 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_199235 exon8 c.C508T p.R170C . . . FAM82A1 151393 broad.mit.edu 36 2 38055886 38055886 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001170793 exon3 c.C220T p.R74X . . . SLC8A1 6546 broad.mit.edu 36 2 40510789 40510789 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001112800 exon1 c.A136G p.T46A . . . NRXN1 9378 broad.mit.edu 36 2 50553050 50553050 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001135659 exon17 c.C3254A p.A1085D . . . PAPOLG 64895 broad.mit.edu 36 2 60863814 60863814 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022894 exon13 c.G1132A p.A378T . . . VPS54 51542 broad.mit.edu 36 2 64023129 64023129 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016516 exon11 c.T1372C p.F458L . . . VAMP5 10791 broad.mit.edu 36 2 85673711 85673711 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006634 exon3 c.G271A p.V91I . . . ASAP2 8853 broad.mit.edu 36 2 9458407 9458407 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001135191 exon25 c.G2685A p.Q895Q . . . CPSF3 51692 broad.mit.edu 36 2 9528974 9528974 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016207 exon17 c.C1908T p.S636S . . . SNRNP200 23020 broad.mit.edu 36 2 96304554 96304554 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014014 exon45 c.G6334A p.A2112T . . . KIAA1310 55683 broad.mit.edu 36 2 96648986 96648986 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001115016 exon5 c.G500A p.R167H . . . AFF3 3899 broad.mit.edu 36 2 99548471 99548471 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001025108 exon19 c.C3104A p.S1035X . . . LRP1B 53353 broad.mit.edu 36 2 141529253 141529253 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018557 exon10 c.1454delG p.G485fs . . . PXDN 7837 broad.mit.edu 36 2 1631991 1631991 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012293 exon17 c.2568delC p.P856fs . . . TTN 7273 broad.mit.edu 36 2 179252334 179252334 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_133378 exon139 c.29987delA p.K9996fs . . . PMS1 5378 broad.mit.edu 36 2 190427646 190427646 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000534 exon9 c.1403delA p.E468fs . . . PARD3B 117583 broad.mit.edu 36 2 205874543 205874543 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_057177 exon17 c.2296delA p.K766fs . . . CNGA3 1261 broad.mit.edu 36 2 98379176 98379176 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001298 exon8 c.1111delC p.P371fs . . . ATP2B2 491 broad.mit.edu 36 3 10362721 10362721 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001683 exon14 c.C2370T p.F790F . . . DZIP3 9666 broad.mit.edu 36 3 109877352 109877352 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014648 exon25 c.C2723T p.A908V . . . CD200R1 131450 broad.mit.edu 36 3 114132649 114132649 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138939 exon3 c.G196A p.A66T . . . BOC 91653 broad.mit.edu 36 3 114474805 114474805 + Silent SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033254 exon8 c.C1161A p.G387G . . . GSK3B 2932 broad.mit.edu 36 3 121203618 121203618 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002093 exon2 c.G247A p.A83T . . . KPNA1 3836 broad.mit.edu 36 3 123653151 123653151 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002264 exon8 c.C673T p.R225C . . . PLXND1 23129 broad.mit.edu 36 3 130788159 130788159 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015103 exon3 c.G1582A p.A528T . . . COL6A6 131873 broad.mit.edu 36 3 131765008 131765008 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001102608 exon2 c.C471T p.D157D . . . ASTE1 28990 broad.mit.edu 36 3 132220141 132220141 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014065 exon4 c.A1412G p.Y471C . . . NUP210 23225 broad.mit.edu 36 3 13368384 13368384 + Missense_Mutation SNP C T T rs433032 byCluster;byHapMap TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024923 exon20 c.G2830A p.A944T . . . RYK 6259 broad.mit.edu 36 3 135360794 135360794 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002958 exon14 c.G1687T p.A563S . . . TXNDC6 347736 broad.mit.edu 36 3 139519724 139519724 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_178130 exon6 c.G157A p.E53K . . . PLCH1 23007 broad.mit.edu 36 3 156694878 156694878 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001130960 exon15 c.C1981T p.R661C . . . GHSR 2693 broad.mit.edu 36 3 173648311 173648311 + Missense_Mutation SNP T A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198407 exon1 c.A587T p.N196I . . . TTC14 151613 broad.mit.edu 36 3 181805042 181805042 + Silent SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_133462 exon5 c.T654C p.G218G . . . DNAJB11 51726 broad.mit.edu 36 3 187781896 187781896 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016306 exon5 c.C499T p.R167W . . . ATP13A5 344905 broad.mit.edu 36 3 194522303 194522303 + Silent SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198505 exon16 c.C1776A p.I592I . . . LRRC15 131578 broad.mit.edu 36 3 195561394 195561394 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_130830 exon2 c.C1674T p.C558C . . . MUC4 4585 broad.mit.edu 36 3 196973436 196973436 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138297 exon14 c.C1977T p.N659N . . . TNK2 10188 broad.mit.edu 36 3 197099757 197099757 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005781 exon2 c.C100T p.R34C TNK2,lung,NS,Substitution - Missense,+1 . . TFRC 7037 broad.mit.edu 36 3 197263401 197263401 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003234 exon19 c.C2092T p.R698X . . . SLC4A7 9497 broad.mit.edu 36 3 27406535 27406535 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003615 exon22 c.G3224A p.R1075H . . . CNTN4 152330 broad.mit.edu 36 3 2836264 2836264 + Silent SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_175607 exon6 c.A453G p.G151G . . . CMTM7 112616 broad.mit.edu 36 3 32470744 32470744 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138410 exon5 c.C522T p.A174A . . . ACVR2B 93 broad.mit.edu 36 3 38496175 38496175 + Silent SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001106 exon7 c.C813A p.G271G . . . SCN5A 6331 broad.mit.edu 36 3 38566896 38566896 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001099405 exon27 c.C5917T p.R1973W . . . C3orf39 84892 broad.mit.edu 36 3 43097709 43097709 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032806 exon2 c.G219A p.T73T . . . ZNF35 7584 broad.mit.edu 36 3 44667635 44667635 + Silent SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003420 exon2 c.A72G p.E24E . . . ZNF502 91392 broad.mit.edu 36 3 44736800 44736800 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033210 exon3 c.G43T p.E15X . . . DHX30 22907 broad.mit.edu 36 3 47863071 47863071 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138615 exon11 c.G1505T p.R502L . . . UQCRC1 7384 broad.mit.edu 36 3 48611573 48611573 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003365 exon13 c.C1435T p.R479C . . . CDHR4 389118 broad.mit.edu 36 3 49811433 49811433 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001007540 exon3 c.C401A p.P134Q . . . SLC38A3 10991 broad.mit.edu 36 3 50229905 50229905 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006841 exon9 c.T686C p.I229T . . . ALAS1 211 broad.mit.edu 36 3 52211779 52211779 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000688 exon4 c.C416T p.A139V . . . NISCH 11188 broad.mit.edu 36 3 52500460 52500460 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007184 exon20 c.G3795A p.T1265T . . . ACTR8 93973 broad.mit.edu 36 3 53887446 53887446 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022899 exon3 c.G383A p.R128H . . . PSMD6 9861 broad.mit.edu 36 3 63983091 63983091 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014814 exon2 c.C294T p.S98S . . . C3orf64 285203 broad.mit.edu 36 3 69140290 69140290 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173654 exon5 c.G290A p.C97Y . . . SETD5 55209 broad.mit.edu 36 3 9457197 9457197 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080517 exon8 c.C625T p.R209W . . . MECOM 2122 broad.mit.edu 36 3 170316254 170316254 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001105077 exon8 c.1731delT p.F577fs . . . EOMES 8320 broad.mit.edu 36 3 27733758 27733758 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005442 exon6 c.1868delC p.P623fs . . . GSTCD 79807 broad.mit.edu 36 4 106986150 106986151 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001031720 exon12 c.1869_1870insA p.P623fs . . . ODZ3 55714 broad.mit.edu 36 4 183950566 183950567 + Frame_Shift_Ins INS - C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080477 exon25 c.5747_5748insC p.N1916fs . . . ZNF518B 85460 broad.mit.edu 36 4 10054756 10054756 + Silent SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_053042 exon3 c.T2295C p.H765H . . . PPA2 27068 broad.mit.edu 36 4 106578602 106578602 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_176869 exon6 c.G482A p.C161Y . . . SGMS2 166929 broad.mit.edu 36 4 109040185 109040185 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001136257 exon3 c.T461C p.I154T . . . KIAA1109 84162 broad.mit.edu 36 4 123360082 123360082 + Silent SNP T G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015312 exon19 c.T2385G p.G795G . . . KIAA1109 84162 broad.mit.edu 36 4 123391129 123391129 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015312 exon35 c.G5873A p.R1958Q . . . KIAA1109 84162 broad.mit.edu 36 4 123394822 123394822 + Missense_Mutation SNP A C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015312 exon36 c.A5945C p.D1982A . . . FAT4 79633 broad.mit.edu 36 4 126459761 126459761 + Silent SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024582 exon1 c.C2745A p.A915A . . . PCDH10 57575 broad.mit.edu 36 4 134292455 134292455 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032961 exon1 c.C1710T p.N570N . . . DCLK2 166614 broad.mit.edu 36 4 151243116 151243116 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001040260 exon2 c.G458A p.R153H . . . LRBA 987 broad.mit.edu 36 4 151406351 151406351 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006726 exon58 c.G8565A p.W2855X . . . FGA 2243 broad.mit.edu 36 4 155730116 155730116 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021871 exon2 c.C103T p.R35C . . . NPY2R 4887 broad.mit.edu 36 4 156355623 156355623 + Missense_Mutation SNP A C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000910 exon2 c.A1082C p.K361T . . . GUCY1A3 2982 broad.mit.edu 36 4 156851316 156851316 + Silent SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001130682 exon6 c.C549A p.G183G . . . RAPGEF2 9693 broad.mit.edu 36 4 160483987 160483987 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014247 exon16 c.G2752A p.A918T . . . CPE 1363 broad.mit.edu 36 4 166520037 166520037 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001873 exon1 c.G214A p.A72T . . . ANXA10 11199 broad.mit.edu 36 4 169285813 169285813 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007193 exon2 c.C22T p.Q8X . . . ODZ3 55714 broad.mit.edu 36 4 183872333 183872333 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080477 exon12 c.A2321G p.D774G . . . HELT 391723 broad.mit.edu 36 4 186178622 186178622 + Missense_Mutation SNP A T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001029887 exon4 c.A686T p.D229V . . . ARAP2 116984 broad.mit.edu 36 4 35907052 35907052 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015230 exon2 c.G452A p.R151H . . . ADRA2C 152 broad.mit.edu 36 4 3738785 3738785 + Silent SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000683 exon1 c.C654A p.S218S . . . TMEM156 80008 broad.mit.edu 36 4 38710280 38710280 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024943 exon1 c.T49C p.F17L . . . GABRG1 2565 broad.mit.edu 36 4 45737779 45737779 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173536 exon9 c.G1381T p.G461C . . . FRYL 285527 broad.mit.edu 36 4 48207743 48207743 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015030 exon58 c.T8161C p.F2721L . . . C4orf6 10141 broad.mit.edu 36 4 5578916 5578916 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005750 exon2 c.G239A p.S80N . . . TMEM165 55858 broad.mit.edu 36 4 55985511 55985511 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018475 exon5 c.C842T p.T281M . . . CRMP1 1400 broad.mit.edu 36 4 5889421 5889421 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001313 exon10 c.G1082A p.R361Q . . . JAKMIP1 152789 broad.mit.edu 36 4 6082398 6082398 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001099433 exon20 c.A2391G p.E797E . . . KIAA0232 9778 broad.mit.edu 36 4 6916619 6916619 + Silent SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014743 exon7 c.A3609G p.S1203S . . . GRPEL1 80273 broad.mit.edu 36 4 7113534 7113534 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_025196 exon4 c.C610T p.R204C . . . PPEF2 5470 broad.mit.edu 36 4 77016622 77016622 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006239 exon11 c.C1162T p.R388W . . . FRAS1 80144 broad.mit.edu 36 4 79407476 79407476 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_025074 exon9 c.G847A p.G283R . . . ABLIM2 84448 broad.mit.edu 36 4 8140875 8140875 + De_novo_Start_OutOfFrame SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001130083 exon4 c.C375T p.N125N . . . ACOX3 8310 broad.mit.edu 36 4 8444985 8444985 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003501 exon11 c.G1275A p.A425A . . . HELQ 113510 broad.mit.edu 36 4 84569916 84569916 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_133636 exon12 c.C2303T p.T768M . . . PTPN13 5783 broad.mit.edu 36 4 87950095 87950095 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_080684 exon43 c.C6660T p.G2220G . . . SPARCL1 8404 broad.mit.edu 36 4 88635172 88635172 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001128310 exon4 c.C186T p.D62D . . . COL25A1 84570 broad.mit.edu 36 4 109986771 109986771 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198721 exon27 c.1488delA p.K496fs . . . KIAA1109 84162 broad.mit.edu 36 4 123502851 123502851 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015312 exon84 c.15017delA p.X5006X . . . SEL1L3 23231 broad.mit.edu 36 4 25458356 25458356 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015187 exon2 c.391delA p.R131fs . . . UGT2A1 10941 broad.mit.edu 36 4 70547662 70547662 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006798 exon1 c.290delA p.N97fs . . . GAK 2580 broad.mit.edu 36 4 835648 835648 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005255 exon25 c.3398delC p.P1133fs . . . EGFLAM 133584 broad.mit.edu 36 5 38442948 38442949 + Frame_Shift_Ins INS - G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_182798 exon3 c.388_389insG p.W130fs . . . PPIP5K2 23262 broad.mit.edu 36 5 102497139 102497139 + Silent SNP G C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015216 exon2 c.G198C p.R66R . . . MCC 4163 broad.mit.edu 36 5 112514963 112514963 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001085377 exon4 c.G683A p.R228H . . . COMMD10 51397 broad.mit.edu 36 5 115655172 115655172 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016144 exon6 c.G570T p.K190N . . . KIF20A 10112 broad.mit.edu 36 5 137550751 137550751 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005733 exon19 c.C2423T p.A808V . . . TMCO6 55374 broad.mit.edu 36 5 140002791 140002791 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018502 exon7 c.C787T p.L263F . . . PCDHA2 56146 broad.mit.edu 36 5 140155301 140155301 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018905 exon1 c.G568A p.E190K . . . PCDHA9 9752 broad.mit.edu 36 5 140208409 140208409 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014005 exon1 c.G145A p.A49T . . . PCDHA10 56139 broad.mit.edu 36 5 140217093 140217093 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_031860 exon1 c.G1276A p.A426T . . . PCDHB2 56133 broad.mit.edu 36 5 140455699 140455699 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018936 exon1 c.G1141A p.G381R . . . PCDHGA1 56114 broad.mit.edu 36 5 140691642 140691642 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_031993 exon1 c.C1207T p.R403C . . . PCDHGA5 56110 broad.mit.edu 36 5 140724518 140724518 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032054 exon1 c.C437T p.A146V . . . PCDH12 51294 broad.mit.edu 36 5 141315448 141315448 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016580 exon1 c.C2153T p.T718M . . . PCDH12 51294 broad.mit.edu 36 5 141316799 141316799 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016580 exon1 c.G802A p.A268T . . . SH3TC2 79628 broad.mit.edu 36 5 148366801 148366801 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024577 exon16 c.C3511T p.R1171C . . . PDGFRB 5159 broad.mit.edu 36 5 149495534 149495534 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002609 exon3 c.C141T p.S47S . . . GALNT10 55568 broad.mit.edu 36 5 153654665 153654665 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198321 exon2 c.C256T p.R86C . . . SLIT3 6586 broad.mit.edu 36 5 168553131 168553131 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003062 exon4 c.C343T p.R115C . . . TLX3 30012 broad.mit.edu 36 5 170669931 170669931 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021025 exon2 c.G594A p.A198A . . . HRH2 3274 broad.mit.edu 36 5 175043197 175043197 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022304 exon1 c.G355A p.A119T . . . FGFR4 2264 broad.mit.edu 36 5 176455682 176455682 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_213647 exon14 c.G1840T p.A614S . . . ZNF354A 6940 broad.mit.edu 36 5 178071998 178071998 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005649 exon5 c.G1487A p.C496Y . . . FLT4 2324 broad.mit.edu 36 5 179970955 179970955 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_182925 exon27 c.G3668A p.R1223H . . . CDH6 1004 broad.mit.edu 36 5 31349273 31349273 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004932 exon8 c.G1345T p.E449X . . . PDZD2 23037 broad.mit.edu 36 5 32126321 32126321 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_178140 exon19 c.A7010G p.Q2337R . . . RXFP3 51289 broad.mit.edu 36 5 33973191 33973191 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016568 exon1 c.G589A p.G197S . . . C6 729 broad.mit.edu 36 5 41185273 41185273 + Missense_Mutation SNP T G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000065 exon17 c.A2450C p.K817T . . . ACTBL2 345651 broad.mit.edu 36 5 56813544 56813544 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001017992 exon1 c.A748G p.T250A . . . GFM2 84340 broad.mit.edu 36 5 74061968 74061968 + Silent SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032380 exon17 c.T1599C p.C533C . . . CKMT2 1160 broad.mit.edu 36 5 80584328 80584328 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001825 exon4 c.G211A p.A71T . . . ACOT12 134526 broad.mit.edu 36 5 80691489 80691489 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_130767 exon5 c.G485A p.S162N . . . CHD1 1105 broad.mit.edu 36 5 98240087 98240087 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001270 exon23 c.G3313A p.E1105K . . . CSF1R 1436 broad.mit.edu 36 5 149430302 149430302 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005211 exon8 c.1108delC p.R370fs . . . CDH10 1008 broad.mit.edu 36 5 24523590 24523590 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006727 exon12 c.2306delG p.G769fs . . . TNPO1 3842 broad.mit.edu 36 5 72235301 72235301 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_153188 exon23 c.2500delT p.F834fs . . . ROS1 6098 broad.mit.edu 36 6 117822094 117822095 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002944 exon10 c.1088_1089insT p.Y363fs . . . HIVEP2 3097 broad.mit.edu 36 6 143136950 143136951 + Frame_Shift_Ins INS - T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006734 exon5 c.619_620insA p.H207fs . . . HACE1 57531 broad.mit.edu 36 6 105351252 105351252 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020771 exon9 c.A787G p.T263A . . . EYA4 2070 broad.mit.edu 36 6 133827675 133827675 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_172103 exon9 c.A721G p.S241G . . . HIVEP2 3097 broad.mit.edu 36 6 143124331 143124331 + Silent SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006734 exon8 c.A5583G p.S1861S . . . PHACTR2 9749 broad.mit.edu 36 6 144146093 144146093 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001100165 exon9 c.C1450T p.R484C . . . SASH1 23328 broad.mit.edu 36 6 148895730 148895730 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015278 exon14 c.G1669A p.G557R . . . AKAP12 9590 broad.mit.edu 36 6 151714304 151714304 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005100 exon4 c.G3085A p.V1029I . . . RBM16 22828 broad.mit.edu 36 6 155195809 155195809 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014892 exon20 c.G3404A p.G1135D . . . NOX3 50508 broad.mit.edu 36 6 155759780 155759780 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015718 exon13 c.T1589C p.I530T . . . FNDC1 84624 broad.mit.edu 36 6 159573788 159573788 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032532 exon11 c.G2254A p.A752T . . . MAP3K4 4216 broad.mit.edu 36 6 161425594 161425594 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006724 exon7 c.A2327G p.E776G . . . RPS6KA2 6196 broad.mit.edu 36 6 166822381 166822381 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021135 exon10 c.G837A p.P279P . . . NUP153 9972 broad.mit.edu 36 6 17737350 17737350 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005124 exon18 c.C3059A p.A1020E . . . KIF13A 63971 broad.mit.edu 36 6 17963823 17963823 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022113 exon6 c.G318A p.S106S . . . HIST1H2BE 8344 broad.mit.edu 36 6 26292181 26292181 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003523 exon1 c.T179C p.M60T . . . ZKSCAN3 80317 broad.mit.edu 36 6 28441710 28441710 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024493 exon6 c.G1286A p.S429N . . . TRIM10 10107 broad.mit.edu 36 6 30236251 30236251 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006778 exon1 c.C364T p.R122W . . . LST1 7940 broad.mit.edu 36 6 31664289 31664289 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007161 exon4 c.G172T p.E58X . . . C6orf25 80739 broad.mit.edu 36 6 31799553 31799553 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138272 exon2 c.G220A p.V74M . . . MSH5 4439 broad.mit.edu 36 6 31829336 31829336 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_025259 exon12 c.G1016A p.R339H . . . HSPA1L 3305 broad.mit.edu 36 6 31885862 31885862 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005527 exon2 c.G1867A p.G623R . . . EGFL8 80864 broad.mit.edu 36 6 32242478 32242478 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_030652 exon4 c.C247T p.R83W . . . NOTCH4 4855 broad.mit.edu 36 6 32278025 32278025 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004557 exon21 c.G3561T p.G1187G . . . PSMB9 5698 broad.mit.edu 36 6 32934162 32934162 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002800 exon5 c.C434T p.A145V . . . BRD2 6046 broad.mit.edu 36 6 33052455 33052455 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005104 exon7 c.C964T p.R322C . . . BRD2 6046 broad.mit.edu 36 6 33053626 33053626 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005104 exon9 c.A1444G p.S482G . . . COL11A2 1302 broad.mit.edu 36 6 33241496 33241496 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_080681 exon61 c.C4300T p.R1434C . . . SCUBE3 222663 broad.mit.edu 36 6 35319367 35319367 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152753 exon16 c.C1928T p.T643M . . . DEF6 50619 broad.mit.edu 36 6 35395429 35395429 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022047 exon8 c.C1366T p.R456X . . . TULP1 7287 broad.mit.edu 36 6 35581845 35581845 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003322 exon10 c.G912A p.T304T . . . FGD2 221472 broad.mit.edu 36 6 37087491 37087491 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173558 exon4 c.G410A p.R137H . . . TSPO2 222642 broad.mit.edu 36 6 41119838 41119838 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001010873 exon4 c.C497T p.T166M . . . FOXP4 116113 broad.mit.edu 36 6 41665775 41665775 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001012426 exon11 c.G1246A p.A416T . . . TTBK1 84630 broad.mit.edu 36 6 43330829 43330829 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032538 exon7 c.G641A p.R214Q . . . PGK2 5232 broad.mit.edu 36 6 49861672 49861672 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138733 exon1 c.C1188T p.G396G . . . PGK2 5232 broad.mit.edu 36 6 49862550 49862550 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138733 exon1 c.G310T p.V104L . . . TFAP2D 83741 broad.mit.edu 36 6 50791170 50791170 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_172238 exon2 c.G422A p.R141H . . . TFAP2B 7021 broad.mit.edu 36 6 50904351 50904351 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003221 exon3 c.G601T p.V201F . . . DST 667 broad.mit.edu 36 6 56570637 56570637 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015548 exon28 c.G4186A p.G1396R . . . BAI3 577 broad.mit.edu 36 6 70091558 70091558 + Missense_Mutation SNP C G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001704 exon21 c.C2888G p.A963G . . . BAI3 577 broad.mit.edu 36 6 70122435 70122435 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001704 exon28 c.C3557A p.T1186K . . . LMBRD1 55788 broad.mit.edu 36 6 70557012 70557012 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018368 exon2 c.T143C p.I48T . . . RIMS1 22999 broad.mit.edu 36 6 72948788 72948788 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014989 exon6 c.C893T p.A298V . . . COL12A1 1303 broad.mit.edu 36 6 75905263 75905263 + Missense_Mutation SNP T A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004370 exon28 c.A5092T p.M1698L . . . COL12A1 1303 broad.mit.edu 36 6 75918446 75918446 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004370 exon20 c.G3857A p.R1286H . . . SNX14 57231 broad.mit.edu 36 6 86284219 86284219 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020468 exon20 c.A2083G p.S695G . . . MDN1 23195 broad.mit.edu 36 6 90472592 90472592 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014611 exon53 c.C8055T p.V2685V . . . MDN1 23195 broad.mit.edu 36 6 90479187 90479187 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014611 exon48 c.C7258T p.R2420X . . . MDN1 23195 broad.mit.edu 36 6 90481103 90481103 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014611 exon46 c.G6949T p.D2317Y . . . MICAL1 64780 broad.mit.edu 36 6 109874637 109874637 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001159291 exon17 c.2001delG p.Q667fs . . . CCDC28A 25901 broad.mit.edu 36 6 139139023 139139023 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015439 exon2 c.343delA p.K115fs . . . FBXO5 26271 broad.mit.edu 36 6 153335175 153335175 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012177 exon4 c.1017delA p.K339fs . . . MYO6 4646 broad.mit.edu 36 6 76656578 76656578 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004999 exon26 c.2743delA p.K915fs . . . TPBG 7162 broad.mit.edu 36 6 83131616 83131617 + Frame_Shift_Del DEL CA - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 CA CA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001166392 exon2 c.219_220del p.73_74del . . . ZNF292 23036 broad.mit.edu 36 6 88026203 88026203 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015021 exon8 c.6137delA p.E2046fs . . . SSPO 23145 broad.mit.edu 36 7 149105015 149105016 + Frame_Shift_Ins INS - G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198455 exon3 c.292_293insG p.W98fs . . . CUX1 1523 broad.mit.edu 36 7 101664117 101664117 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_181552 exon22 c.C3499T p.R1167C . . . FLNC 2318 broad.mit.edu 36 7 128281045 128281046 + Missense_Mutation DNP GA TG TG novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 GA GA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001458 exon39 c.6402_6403TG . . . . WDR91 29062 broad.mit.edu 36 7 134544922 134544922 + Silent SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014149 exon2 c.A249G p.T83T . . . NUP205 23165 broad.mit.edu 36 7 134954895 134954895 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015135 exon29 c.A4148G p.N1383S . . . PTN 5764 broad.mit.edu 36 7 136586530 136586530 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002825 exon4 c.G438T p.K146N . . . KIAA1549 57670 broad.mit.edu 36 7 138229655 138229655 + Silent SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001164665 exon10 c.T4005C p.T1335T . . . BRAF 673 broad.mit.edu 36 7 140099605 140099605 + Missense_Mutation SNP A T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004333 exon15 c.T1799A p.V600E BRAF,pituitary,NS,Substitution - Missense,0 . . MGAM 8972 broad.mit.edu 36 7 141365484 141365484 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004668 exon4 c.G344A p.R115H . . . MGAM 8972 broad.mit.edu 36 7 141449702 141449702 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004668 exon47 c.G5490A p.T1830T . . . TRPV5 56302 broad.mit.edu 36 7 142336662 142336662 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_019841 exon4 c.G470A p.R157H . . . KEL 3792 broad.mit.edu 36 7 142369035 142369035 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000420 exon2 c.C50T p.A17V . . . PIP 5304 broad.mit.edu 36 7 142546752 142546752 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002652 exon4 c.C336T p.A112A . . . ZNF777 27153 broad.mit.edu 36 7 148760746 148760746 + Missense_Mutation SNP G C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015694 exon6 c.C1550G p.A517G . . . TMEM176B 28959 broad.mit.edu 36 7 150124544 150124544 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001101312 exon2 c.G47A p.R16K . . . GALNT11 63917 broad.mit.edu 36 7 151431240 151431240 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022087 exon4 c.G530A p.R177H . . . GALNT11 63917 broad.mit.edu 36 7 151436198 151436198 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022087 exon6 c.C855T p.S285S . . . RBM33 155435 broad.mit.edu 36 7 155227349 155227349 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_053043 exon13 c.C2125T p.R709C . . . MACC1 346389 broad.mit.edu 36 7 20164866 20164866 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_182762 exon5 c.T1643C p.L548S . . . NPY 4852 broad.mit.edu 36 7 24291501 24291501 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000905 exon2 c.C117T p.D39D . . . GNA12 2768 broad.mit.edu 36 7 2737671 2737671 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007353 exon4 c.G816A p.E272E . . . CREB5 9586 broad.mit.edu 36 7 28576546 28576546 + Silent SNP G A A rs34895305 unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004904 exon5 c.G309A p.T103T . . . ELMO1 9844 broad.mit.edu 36 7 36901025 36901025 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001039459 exon2 c.C120T p.S40S . . . TXNDC3 51314 broad.mit.edu 36 7 37894421 37894421 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016616 exon15 c.C1265T p.A422V . . . SFRP4 6424 broad.mit.edu 36 7 37922354 37922354 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003014 exon1 c.C311T p.A104V . . . GLI3 2737 broad.mit.edu 36 7 41970804 41970804 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000168 exon15 c.C4392T p.D1464D . . . AEBP1 165 broad.mit.edu 36 7 44119813 44119813 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001129 exon21 c.G2905A p.V969I . . . OGDH 4967 broad.mit.edu 36 7 44651468 44651468 + Silent SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001003941 exon3 c.T240C p.F80F . . . ZMIZ2 83637 broad.mit.edu 36 7 44766626 44766626 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_174929 exon7 c.C1071T p.S357S . . . ZMIZ2 83637 broad.mit.edu 36 7 44770582 44770582 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_174929 exon12 c.C1822T p.R608W . . . ZPBP 11055 broad.mit.edu 36 7 50092035 50092035 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001159878 exon3 c.C215T p.A72V . . . IKZF1 10320 broad.mit.edu 36 7 50435273 50435273 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006060 exon8 c.C1014T p.S338S . . . POM121L12 285877 broad.mit.edu 36 7 53071275 53071275 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_182595 exon1 c.C417T p.I139I . . . SUN1 23353 broad.mit.edu 36 7 859757 859757 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001130965 exon10 c.C1239T p.D413D . . . ABCB1 5243 broad.mit.edu 36 7 87016717 87016717 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000927 exon15 c.G1608A p.K536K . . . FZD1 8321 broad.mit.edu 36 7 90733070 90733070 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003505 exon1 c.C939T p.P313P . . . ASB4 51666 broad.mit.edu 36 7 94995104 94995104 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_016116 exon3 c.G531A p.T177T . . . GIGYF1 64599 broad.mit.edu 36 7 100123106 100123106 + Frame_Shift_Del DEL G - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022574 exon4 c.331delC p.L111fs . . . INTS1 26173 broad.mit.edu 36 7 1486494 1486495 + Frame_Shift_Del DEL AG - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 AG AG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080453 exon30 c.4058_4059del p.1353_1353del . . . INTS1 26173 broad.mit.edu 36 7 1486502 1486502 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001080453 exon30 c.4051delG p.D1351fs . . . KHDRBS3 10656 broad.mit.edu 36 8 136624097 136624098 + Frame_Shift_Ins INS - T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006558 exon3 c.226_227insT p.L76fs . . . STAU2 27067 broad.mit.edu 36 8 74626861 74626862 + Frame_Shift_Ins INS - G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001164383 exon8 c.954_955insC p.P318fs . . . CNBD1 168975 broad.mit.edu 36 8 88367993 88367994 + Frame_Shift_Ins INS - A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173538 exon8 c.1020_1021insA p.W340fs . . . RIMS2 9699 broad.mit.edu 36 8 104993524 104993524 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001100117 exon6 c.G1760A p.R587H . . . DPYS 1807 broad.mit.edu 36 8 105511024 105511024 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001385 exon5 c.C875T p.A292V . . . CSMD3 114788 broad.mit.edu 36 8 114003083 114003083 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_198123 exon10 c.C1582T p.R528W . . . TAF2 6873 broad.mit.edu 36 8 120824003 120824003 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003184 exon25 c.C3289T p.P1097S . . . KLHL38 340359 broad.mit.edu 36 8 124733386 124733386 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001081675 exon1 c.G962A p.R321Q . . . KCNQ3 3786 broad.mit.edu 36 8 133561605 133561605 + Silent SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004519 exon1 c.G357T p.R119R . . . ZFAT 57623 broad.mit.edu 36 8 135683723 135683723 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001174157 exon5 c.G1235A p.R412H . . . KHDRBS3 10656 broad.mit.edu 36 8 136728469 136728469 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006558 exon9 c.C1001A p.A334E . . . FAM135B 51059 broad.mit.edu 36 8 139214134 139214134 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015912 exon20 c.G4105A p.A1369T . . . PTK2 5747 broad.mit.edu 36 8 141958804 141958804 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001199649 exon4 c.G310A p.V104I . . . SLC7A2 6542 broad.mit.edu 36 8 17462295 17462295 + Nonsense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001008539 exon9 c.C1465T p.Q489X . . . PIWIL2 55124 broad.mit.edu 36 8 22229780 22229780 + Silent SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_018068 exon19 c.A2286G p.A762A . . . CHRNA2 1135 broad.mit.edu 36 8 27376880 27376880 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000742 exon6 c.C997T p.L333L . . . C8orf80 389643 broad.mit.edu 36 8 27959050 27959050 + Missense_Mutation SNP C G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001010906 exon12 c.G1359C p.K453N . . . KIF13B 23303 broad.mit.edu 36 8 29062052 29062052 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015254 exon16 c.G1774T p.A592S . . . ANK1 286 broad.mit.edu 36 8 41700284 41700284 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020475 exon8 c.G736A p.A246T . . . C8orf42 157695 broad.mit.edu 36 8 432415 432415 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_175075 exon3 c.C542T p.P181L . . . MCM4 4173 broad.mit.edu 36 8 49051881 49051881 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_182746 exon17 c.G2582A p.R861H . . . RGS20 8601 broad.mit.edu 36 8 55014705 55014705 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_170587 exon3 c.G527A p.R176Q . . . PDE7A 5150 broad.mit.edu 36 8 66854584 66854584 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002603 exon3 c.C130T p.R44C . . . DNAJC5B 85479 broad.mit.edu 36 8 67151533 67151533 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033105 exon4 c.C204T p.H68H . . . WWP1 11059 broad.mit.edu 36 8 87542572 87542572 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007013 exon23 c.G2503A p.V835M . . . CNBD1 168975 broad.mit.edu 36 8 88367898 88367898 + Missense_Mutation SNP G C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173538 exon8 c.G925C p.E309Q . . . DCAF4L2 138009 broad.mit.edu 36 8 88954802 88954802 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152418 exon1 c.C514T p.R172C . . . RUNX1T1 862 broad.mit.edu 36 8 93096080 93096080 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001198626 exon5 c.G371A p.S124N . . . RIMS2 9699 broad.mit.edu 36 8 104996955 104996955 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001100117 exon7 c.1869delA p.V623fs . . . COLEC10 10584 broad.mit.edu 36 8 120183780 120183780 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_006438 exon4 c.305delA p.E102fs . . . HAS2 3037 broad.mit.edu 36 8 122698536 122698536 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005328 exon3 c.719delG p.G240fs . . . TSPYL5 85453 broad.mit.edu 36 8 98358848 98358848 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_033512 exon1 c.401delA p.N134fs . . . TEX10 54881 broad.mit.edu 36 9 102149268 102149268 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_017746 exon3 c.T422C p.V141A . . . ALDOB 229 broad.mit.edu 36 9 103227001 103227001 + Missense_Mutation SNP C G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000035 exon8 c.G944C p.G315A . . . SLC44A1 23446 broad.mit.edu 36 9 107167641 107167641 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_080546 exon11 c.G1310A p.R437H . . . ZNF462 58499 broad.mit.edu 36 9 108774171 108774171 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021224 exon8 c.G6492A p.L2164L . . . SVEP1 79987 broad.mit.edu 36 9 112298916 112298916 + Missense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_153366 exon8 c.G1800T p.K600N . . . RGS3 5998 broad.mit.edu 36 9 115386256 115386256 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144488 exon21 c.C2743T p.R915C . . . COL27A1 85301 broad.mit.edu 36 9 115996546 115996546 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_032888 exon6 c.C2058T p.H686H . . . PAPPA 5069 broad.mit.edu 36 9 118134485 118134485 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002581 exon12 c.C3314T p.T1105M . . . LHX6 26468 broad.mit.edu 36 9 124029106 124029106 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_199160 exon3 c.G181A p.A61T . . . GAPVD1 26130 broad.mit.edu 36 9 127139367 127139367 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_015635 exon16 c.G2634A p.S878S . . . GLE1 2733 broad.mit.edu 36 9 130341764 130341764 + Missense_Mutation SNP A C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001003722 exon14 c.A1930C p.M644L . . . SOHLH1 402381 broad.mit.edu 36 9 137728385 137728385 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001012415 exon5 c.G555A p.A185A . . . CACNA1B 774 broad.mit.edu 36 9 139927505 139927505 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000718 exon4 c.C583T p.R195C . . . RFX3 5991 broad.mit.edu 36 9 3261070 3261070 + Missense_Mutation SNP A T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_134428 exon11 c.T1135A p.L379M . . . B4GALT1 2683 broad.mit.edu 36 9 33110442 33110442 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001497 exon3 c.G811A p.V271I . . . FRMPD1 22844 broad.mit.edu 36 9 37734869 37734869 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014907 exon16 c.G2840A p.R947Q . . . ALDH1B1 219 broad.mit.edu 36 9 38387082 38387082 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000692 exon2 c.C1337T p.A446V . . . KIAA1432 57589 broad.mit.edu 36 9 5722429 5722429 + De_novo_Start_OutOfFrame SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020829 exon6 c.G525A p.T175T . . . UHRF2 115426 broad.mit.edu 36 9 6467754 6467754 + Missense_Mutation SNP A T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152896 exon6 c.A1106T p.Y369F . . . APBA1 320 broad.mit.edu 36 9 71254511 71254511 + Nonsense_Mutation SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001163 exon10 c.G1990T p.G664X . . . TRPM6 140803 broad.mit.edu 36 9 76590727 76590727 + Missense_Mutation SNP A T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001177310 exon21 c.T2787A p.F929L . . . TRPM6 140803 broad.mit.edu 36 9 76626526 76626526 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001177310 exon8 c.C874T p.P292S . . . GNA14 9630 broad.mit.edu 36 9 79239227 79239227 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004297 exon3 c.T341C p.V114A . . . ZCCHC6 79670 broad.mit.edu 36 9 88106029 88106029 + Nonsense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024617 exon26 c.C4402T p.Q1468X . . . DAPK1 1612 broad.mit.edu 36 9 89510899 89510899 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004938 exon26 c.C3093T p.D1031D . . . ECM2 1842 broad.mit.edu 36 9 94317077 94317077 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001393 exon4 c.G711A p.G237G . . . C9orf30 91283 broad.mit.edu 36 9 102252820 102252820 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_080655 exon3 c.579delA p.L193fs . . . RGS3 5998 broad.mit.edu 36 9 115338940 115338942 + In_Frame_Del DEL AGA - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 AGA AGA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_144488 exon20 c.1958_1960del p.653_654del . . . SLC25A25 114789 broad.mit.edu 36 9 129894137 129894137 + Frame_Shift_Del DEL A - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001006642 exon1 c.167delA p.E56fs . . . DAPK1 1612 broad.mit.edu 36 9 89511622 89511622 + Frame_Shift_Del DEL G - - rs56169226 unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004938 exon26 c.3816delG p.M1272fs . . . USP11 8237 broad.mit.edu 36 X 46988880 46988881 + Frame_Shift_Ins INS - G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004651 exon14 c.1959_1960insG p.D653fs . . . FAM123B 139285 broad.mit.edu 36 X 63327639 63327640 + Frame_Shift_Ins INS - G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152424 exon2 c.2253_2254insC p.P751fs . . . STARD8 9754 broad.mit.edu 36 X 67860244 67860245 + Frame_Shift_Ins INS - C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001142503 exon13 c.2851_2852insC p.A951fs . . . NXF3 56000 broad.mit.edu 36 X 102221001 102221001 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_022052 exon15 c.C1277T p.A426V . . . AGTR2 186 broad.mit.edu 36 X 115218004 115218004 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000686 exon3 c.A443G p.Y148C . . . ODZ1 10178 broad.mit.edu 36 X 123342659 123342659 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014253 exon31 c.C7586T p.A2529V . . . DCAF12L2 340578 broad.mit.edu 36 X 125127285 125127285 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001013628 exon1 c.G304A p.A102T . . . EGFL6 25975 broad.mit.edu 36 X 13536456 13536456 + Nonsense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001167890 exon7 c.G748T p.G250X . . . F9 2158 broad.mit.edu 36 X 138440635 138440635 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000133 exon1 c.A46G p.T16A . . . SLITRK4 139065 broad.mit.edu 36 X 142544745 142544745 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_173078 exon2 c.C1846T p.P616S . . . UBE2NL 389898 broad.mit.edu 36 X 142795117 142795117 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001012989 exon1 c.G249A p.K83K . . . GLRA2 2742 broad.mit.edu 36 X 14458134 14458134 + Missense_Mutation SNP T A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001118885 exon2 c.T34A p.L12M . . . FMR1NB 158521 broad.mit.edu 36 X 146892470 146892470 + Missense_Mutation SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_152578 exon2 c.A335G p.H112R . . . GABRE 2564 broad.mit.edu 36 X 150873936 150873936 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004961 exon9 c.C1414T p.R472C . . . ATP2B3 492 broad.mit.edu 36 X 152478503 152478503 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_021949 exon16 c.C2748T p.R916R . . . DUSP9 1852 broad.mit.edu 36 X 152568048 152568048 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001395 exon3 c.G541A p.D181N . . . HCFC1 3054 broad.mit.edu 36 X 152873810 152873810 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_005334 exon17 c.G3234A p.P1078P . . . NHS 4810 broad.mit.edu 36 X 17620449 17620449 + Silent SNP A G G novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001136024 exon3 c.A261G p.P87P . . . ACOT9 23597 broad.mit.edu 36 X 23634743 23634743 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001037171 exon11 c.G765A p.T255T . . . PHF16 9767 broad.mit.edu 36 X 46803057 46803057 + Silent SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_014735 exon11 c.C2106A p.G702G . . . UBA1 7317 broad.mit.edu 36 X 46950646 46950646 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_153280 exon16 c.C1797T p.G599G . . . USP11 8237 broad.mit.edu 36 X 46984975 46984975 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_004651 exon6 c.G856A p.A286T . . . TBC1D25 4943 broad.mit.edu 36 X 48304224 48304224 + Missense_Mutation SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_002536 exon6 c.C1984T p.R662W . . . PRAF2 11230 broad.mit.edu 36 X 48816601 48816601 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_007213 exon3 c.G408A p.V136V . . . PHF8 23133 broad.mit.edu 36 X 54045328 54045328 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001184898 exon10 c.C1126A p.L376M . . . PHF8 23133 broad.mit.edu 36 X 54057698 54057698 + Missense_Mutation SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001184898 exon7 c.C620T p.P207L . . . AR 367 broad.mit.edu 36 X 66848001 66848001 + Silent SNP C T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001011645 exon4 c.C322T p.L108L . . . AR 367 broad.mit.edu 36 X 66859512 66859512 + Silent SNP C A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001011645 exon7 c.C972A p.R324R . . . KIF4A 24137 broad.mit.edu 36 X 69510764 69510764 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_012310 exon16 c.G1713A p.L571L . . . ZMYM3 9203 broad.mit.edu 36 X 70381408 70381408 + Missense_Mutation SNP T C C novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001171162 exon19 c.A3032G p.E1011G . . . KIAA2022 340533 broad.mit.edu 36 X 73880856 73880856 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001008537 exon3 c.C261T p.P87P . . . MAGEE1 57692 broad.mit.edu 36 X 75566248 75566248 + Missense_Mutation SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_020932 exon1 c.G1521T p.Q507H . . . POF1B 79983 broad.mit.edu 36 X 84447966 84447966 + Silent SNP G A A novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_024921 exon12 c.C1194T p.C398C . . . KAL1 3730 broad.mit.edu 36 X 8515880 8515880 + Silent SNP G T T novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_000216 exon5 c.C681A p.I227I . . . STAG2 10735 broad.mit.edu 36 X 122999127 122999127 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001042750 exon6 c.358delT p.F120fs . . . SLC25A14 9016 broad.mit.edu 36 X 129334564 129334564 + Frame_Shift_Del DEL T - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_003951 exon10 c.937delT p.F313fs . . . IQSEC2 23096 broad.mit.edu 36 X 53280554 53280554 + Frame_Shift_Del DEL C - - novel unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_001111125 exon15 c.4039delG p.A1347fs . . . MAGEE2 139599 broad.mit.edu 36 X 74921479 74921479 + Frame_Shift_Del DEL G - - rs61732441 unknown TCGA-AA-3821-01A-01W-0995-10 TCGA-AA-3821-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq NM_138703 exon1 c.133delC p.Q45fs . . .