Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer TranscriptID Exon ChromChange AAChange COSMIC_Codon COSMIC_Gene Drug_Target ENTPD6 955 hgsc.bcm.edu 36 20 25145303 25145304 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001247 exon8 c.729_730insG p.G243fs . . . RPRD1B 58490 hgsc.bcm.edu 36 20 36121293 36121294 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_021215 exon5 c.612_613insC p.L204fs . . . CABIN1 23523 hgsc.bcm.edu 36 22 22824130 22824131 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_012295 exon26 c.4092_4093insC p.K1364fs . . . ZHX2 22882 hgsc.bcm.edu 36 8 124033144 124033145 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014943 exon3 c.213_214insA p.S71fs . . . KCTD9 54793 hgsc.bcm.edu 36 8 25352731 25352732 + Frame_Shift_Ins INS - - T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_017634 exon6 c.480_481insA p.N160fs . . . IL27RA 9466 hgsc.bcm.edu 36 19 14018253 14018254 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004843 exon8 c.964_965insC p.A322fs . . . ZNF559 84527 hgsc.bcm.edu 36 19 9312823 9312824 + Frame_Shift_Ins INS - - T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032497 exon5 c.206_207insT p.N69fs . . . TNNT2 7139 hgsc.bcm.edu 36 1 199601371 199601372 + Frame_Shift_Ins INS - - CT novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001001430 exon8 c.254_255insAG p.V85fs . . . PRKAA2 5563 hgsc.bcm.edu 36 1 56945928 56945929 + Frame_Shift_Ins INS - - T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006252 exon9 c.1613_1614insT p.D538fs . . . SLC44A3 126969 hgsc.bcm.edu 36 1 95130519 95130520 + Frame_Shift_Ins INS - - T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_152369 exon13 c.1571_1572insT p.A524fs . . . MED23 9439 hgsc.bcm.edu 36 6 131961538 131961539 + Frame_Shift_Ins INS - - T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004830 exon19 c.2277_2278insA p.N759fs . . . C6orf211 79624 hgsc.bcm.edu 36 6 151827428 151827429 + Frame_Shift_Ins INS - - T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_024573 exon4 c.540_541insT p.E180fs . . . TPMT 7172 hgsc.bcm.edu 36 6 18251871 18251872 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000367 exon4 c.301_302insT p.T101fs . . . TAP1 6890 hgsc.bcm.edu 36 6 32923309 32923310 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000593 exon9 c.2042_2043insG p.A681fs . . . PHF3 23469 hgsc.bcm.edu 36 6 64479634 64479635 + Frame_Shift_Ins INS - - T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_015153 exon15 c.4191_4192insT p.D1397fs . . . HTR1E 3354 hgsc.bcm.edu 36 6 87782565 87782566 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000865 exon2 c.794_795insC p.I265fs . . . TMEM135 65084 hgsc.bcm.edu 36 11 86456466 86456467 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001168724 exon2 c.224_225insA p.L75fs . . . EVI2A 2123 hgsc.bcm.edu 36 17 26670090 26670091 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001003927 exon3 c.137_138insT p.S46fs . . . MTMR4 9110 hgsc.bcm.edu 36 17 53945244 53945245 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004687 exon3 c.61_62insC p.K21fs . . . MYH11 4629 hgsc.bcm.edu 36 16 15710187 15710188 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001040113 exon42 c.5820_5821insC p.P1940fs . . . COLEC12 81035 hgsc.bcm.edu 36 18 336827 336828 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_130386 exon5 c.795_796insT p.L265fs . . . KIAA1468 57614 hgsc.bcm.edu 36 18 58076875 58076876 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_020854 exon15 c.2188_2189insA p.E730fs . . . OSBPL11 114885 hgsc.bcm.edu 36 3 126781416 126781417 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_022776 exon3 c.392_393insG p.E131fs . . . SFRS2IP 9169 hgsc.bcm.edu 36 12 44606748 44606749 + Frame_Shift_Ins INS - - T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004719 exon11 c.3003_3004insA p.N1001fs . . . NDUFA12 55967 hgsc.bcm.edu 36 12 93921504 93921505 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018838 exon1 c.84_85insT p.F28fs . . . SCML2 10389 hgsc.bcm.edu 36 X 18170502 18170503 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006089 exon14 c.1952_1953insC p.L651fs . . . FAM123B 139285 hgsc.bcm.edu 36 X 63328783 63328784 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_152424 exon2 c.1109_1110insG p.E370fs . . . EVC2 132884 hgsc.bcm.edu 36 4 5671204 5671205 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_147127 exon15 c.2608_2609insC p.K870fs . . . PDE6B 5158 hgsc.bcm.edu 36 4 646338 646339 + In_Frame_Ins INS - - TCC novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001145292 exon12 c.926_927insTCC p.F309delinsFP . . . MBD5 55777 hgsc.bcm.edu 36 2 148963714 148963715 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018328 exon12 c.3344_3345insC p.S1115fs . . . UBR3 130507 hgsc.bcm.edu 36 2 170626175 170626176 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_172070 exon35 c.4995_4996insG p.F1665fs . . . MAN1B1 11253 hgsc.bcm.edu 36 9 139115368 139115369 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_016219 exon7 c.1007_1008insG p.L336fs . . . KIAA0020 9933 hgsc.bcm.edu 36 9 2814764 2814765 + Frame_Shift_Ins INS - - GT novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014878 exon11 c.1087_1088insAC p.D363fs . . . CHMP5 51510 hgsc.bcm.edu 36 9 33268213 33268214 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_016410 exon7 c.599_600insA p.T200fs . . . ADRA2A 150 hgsc.bcm.edu 36 10 112828952 112828953 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000681 exon1 c.1208_1209insC p.F403fs . . . MASTL 84930 hgsc.bcm.edu 36 10 27499061 27499062 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032844 exon8 c.1167_1168insA p.A389fs . . . SLC16A9 220963 hgsc.bcm.edu 36 10 61102551 61102552 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_194298 exon3 c.323_324insT p.S108fs . . . APC 324 hgsc.bcm.edu 36 5 112179127 112179128 + Frame_Shift_Ins INS - - T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000038 exon9 c.871_872insT p.V291fs . . . APC 324 hgsc.bcm.edu 36 5 112203868 112203869 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000038 exon16 c.4678_4679insA p.E1560fs . . . SLC9A3 6550 hgsc.bcm.edu 36 5 528754 528755 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004174 exon15 c.2173_2174insC p.N725fs . . . CLCA3P 9629 hgsc.bcm.edu 36 1 86880833 86880834 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID . . . . . . . BTN2A3 54718 hgsc.bcm.edu 36 6 26539284 26539285 + Frame_Shift_Ins INS - - TC novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID . . . . . . . KCND2 3751 hgsc.bcm.edu 36 7 119702091 119702091 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_012281 exon1 c.G169A p.D57N . . . NRF1 4899 hgsc.bcm.edu 36 7 129084559 129084559 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_005011 exon2 c.G132A p.S44S . . . SLC13A4 26266 hgsc.bcm.edu 36 7 135029447 135029447 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_012450 exon10 c.T1096C p.Y366H . . . ZC3HAV1 56829 hgsc.bcm.edu 36 7 138383036 138383036 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_020119 exon13 c.T2553C p.T851T . . . TAS2R5 54429 hgsc.bcm.edu 36 7 141137140 141137140 + Silent SNP A A T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018980 exon1 c.A510T p.A170A . . . ZNF425 155054 hgsc.bcm.edu 36 7 148432149 148432149 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001001661 exon4 c.G1747A p.A583T . . . GALNT11 63917 hgsc.bcm.edu 36 7 151449574 151449574 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_022087 exon12 c.G1706A p.R569Q . . . HTR5A 3361 hgsc.bcm.edu 36 7 154493767 154493767 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_024012 exon1 c.C225T p.P75P . . . BZW2 28969 hgsc.bcm.edu 36 7 16701119 16701119 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014038 exon8 c.C787T p.Q263X . . . BZW2 28969 hgsc.bcm.edu 36 7 16703177 16703177 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014038 exon9 c.A935C p.E312A . . . MACC1 346389 hgsc.bcm.edu 36 7 20165270 20165270 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_182762 exon5 c.T1239C p.S413S . . . C7orf27 221927 hgsc.bcm.edu 36 7 2553494 2553494 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_152743 exon3 c.A272G p.Q91R . . . PSMA2 5683 hgsc.bcm.edu 36 7 42923903 42923903 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_002787 exon7 c.A587G p.K196R . . . EGFR 1956 hgsc.bcm.edu 36 7 55191114 55191114 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_201282 exon8 c.C987T p.C329C . . . KCTD7 154881 hgsc.bcm.edu 36 7 65740697 65740697 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001167961 exon3 c.T337A p.S113T . . . BAZ1B 9031 hgsc.bcm.edu 36 7 72530444 72530444 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032408 exon7 c.T1283C p.L428P . . . MAGI2 9863 hgsc.bcm.edu 36 7 77723720 77723720 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_012301 exon10 c.G1523A p.R508H . . . KRIT1 889 hgsc.bcm.edu 36 7 91702062 91702062 + Missense_Mutation SNP C C G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_194455 exon9 c.G841C p.D281H . . . SAMD9 54809 hgsc.bcm.edu 36 7 92569844 92569844 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001193307 exon2 c.A3503C p.Q1168P . . . TRRAP 8295 hgsc.bcm.edu 36 7 98365677 98365677 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003496 exon24 c.A3305G p.Y1102C . . . MEPCE 56257 hgsc.bcm.edu 36 7 99868628 99868628 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001194991 exon3 c.C415T p.R139C . . . CSRP2BP 57325 hgsc.bcm.edu 36 20 18116020 18116020 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_020536 exon10 c.T2266C p.Y756H . . . FOXS1 2307 hgsc.bcm.edu 36 20 29896428 29896428 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004118 exon1 c.A579G p.K193K . . . GSS 2937 hgsc.bcm.edu 36 20 32980973 32980973 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000178 exon12 c.T1193C p.M398T . . . EDEM2 55741 hgsc.bcm.edu 36 20 33186226 33186226 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018217 exon6 c.G678A p.W226X . . . ATRN 8455 hgsc.bcm.edu 36 20 3491971 3491971 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_139322 exon10 c.G1747A p.A583T . . . SDC4 6385 hgsc.bcm.edu 36 20 43395100 43395100 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_002999 exon3 c.G223A p.G75S . . . ZSWIM3 140831 hgsc.bcm.edu 36 20 43939799 43939799 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_080752 exon2 c.A1195G p.T399A . . . ARFGEF2 10564 hgsc.bcm.edu 36 20 47055065 47055065 + Silent SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006420 exon26 c.A3484C p.R1162R . . . CYP24A1 1591 hgsc.bcm.edu 36 20 52219567 52219567 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000782 exon4 c.A611G p.Y204C . . . RAE1 8480 hgsc.bcm.edu 36 20 55382200 55382200 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003610 exon10 c.C824T p.A275V . . . AP1G2 8906 hgsc.bcm.edu 36 14 23105367 23105367 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003917 exon4 c.A431G p.E144G . . . TM9SF1 10548 hgsc.bcm.edu 36 14 23731343 23731343 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001014842 exon4 c.T1027C p.S343P . . . CHMP4A 29082 hgsc.bcm.edu 36 14 23750547 23750547 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014169 exon3 c.G402A p.E134E . . . ADCY4 196883 hgsc.bcm.edu 36 14 23857499 23857499 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001198592 exon26 c.T3197C p.L1066S . . . AKAP6 9472 hgsc.bcm.edu 36 14 32360649 32360649 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004274 exon13 c.T3879C p.N1293N . . . PPP2R3C 55012 hgsc.bcm.edu 36 14 34655569 34655569 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_017917 exon2 c.A184G p.R62G . . . SOS2 6655 hgsc.bcm.edu 36 14 49654992 49654992 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006939 exon23 c.A3819G p.R1273R . . . SOS2 6655 hgsc.bcm.edu 36 14 49655216 49655216 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006939 exon23 c.C3595T p.P1199S . . . MTHFD1 4522 hgsc.bcm.edu 36 14 63978603 63978603 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_005956 exon20 c.G1963A p.A655T . . . SIPA1L1 26037 hgsc.bcm.edu 36 14 71125379 71125379 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_015556 exon2 c.C1037T p.A346V . . . WDR21A 26094 hgsc.bcm.edu 36 14 72488335 72488335 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_181341 exon7 c.C622T p.P208S . . . HEATR4 399671 hgsc.bcm.edu 36 14 73059059 73059059 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_203309 exon2 c.A410G p.N137S . . . NRXN3 9369 hgsc.bcm.edu 36 14 79234019 79234019 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_138970 exon4 c.A895G p.T299A . . . STON2 85439 hgsc.bcm.edu 36 14 80932073 80932073 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_033104 exon2 c.G291A p.S97S . . . GPR65 8477 hgsc.bcm.edu 36 14 87547769 87547769 + Silent SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003608 exon2 c.G825T p.T275T . . . TTC8 123016 hgsc.bcm.edu 36 14 88407748 88407748 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_198309 exon11 c.A1122G p.E374E . . . CYTSA 23384 hgsc.bcm.edu 36 22 23095247 23095247 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001145468 exon13 c.G3046A p.A1016T . . . CRYBB3 1417 hgsc.bcm.edu 36 22 23928687 23928687 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004076 exon3 c.T122G p.L41R . . . ADRBK2 157 hgsc.bcm.edu 36 22 24416189 24416189 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_005160 exon12 c.G991A p.A331T . . . SMTN 6525 hgsc.bcm.edu 36 22 29821409 29821409 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006932 exon12 c.A1753G p.T585A . . . CELSR1 9620 hgsc.bcm.edu 36 22 45213812 45213812 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014246 exon3 c.G4344A p.P1448P . . . CERK 64781 hgsc.bcm.edu 36 22 45468060 45468060 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_022766 exon10 c.T1054G p.F352V . . . SLC44A2 57153 hgsc.bcm.edu 36 19 10602976 10602976 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_020428 exon6 c.G356A p.R119H . . . CARM1 10498 hgsc.bcm.edu 36 19 10876663 10876663 + Missense_Mutation SNP G G C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_199141 exon2 c.G257C p.R86P . . . NOTCH3 4854 hgsc.bcm.edu 36 19 15151228 15151228 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000435 exon21 c.C3407T p.S1136L . . . CYP4F2 8529 hgsc.bcm.edu 36 19 15867322 15867322 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001082 exon3 c.G337A p.A113T . . . SLC25A42 284439 hgsc.bcm.edu 36 19 19067947 19067947 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_178526 exon2 c.T14C p.V5A . . . SBSN 374897 hgsc.bcm.edu 36 19 40707614 40707614 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001166034 exon2 c.C1691T p.P564L . . . ATP4A 495 hgsc.bcm.edu 36 19 40739686 40739686 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000704 exon12 c.C1838A p.A613D . . . ZNF527 84503 hgsc.bcm.edu 36 19 42572027 42572027 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032453 exon5 c.A1236C p.K412N . . . STAP2 55620 hgsc.bcm.edu 36 19 4275147 4275147 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001013841 exon13 c.C1195T p.R399W . . . PRX 57716 hgsc.bcm.edu 36 19 45595649 45595649 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_181882 exon7 c.C450T p.D150D . . . HNRNPUL1 11100 hgsc.bcm.edu 36 19 46492412 46492412 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_144732 exon10 c.G1199A p.R400H . . . HNRNPUL1 11100 hgsc.bcm.edu 36 19 46501756 46501756 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_144732 exon13 c.G1712A p.R571H . . . XRCC1 7515 hgsc.bcm.edu 36 19 48739444 48739444 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006297 exon17 c.T1842C p.S614S . . . PLAUR 5329 hgsc.bcm.edu 36 19 48844893 48844893 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001005377 exon6 c.C862T p.L288F . . . OPA3 80207 hgsc.bcm.edu 36 19 50779837 50779837 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_025136 exon1 c.C26T p.A9V . . . KDELR1 10945 hgsc.bcm.edu 36 19 53584751 53584751 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006801 exon3 c.G222A p.T74T . . . ZNF649 65251 hgsc.bcm.edu 36 19 57086367 57086367 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_023074 exon5 c.T834C p.T278T . . . ZNF613 79898 hgsc.bcm.edu 36 19 57140206 57140206 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_024840 exon6 c.C1150T p.R384C . . . PPP2R1A 5518 hgsc.bcm.edu 36 19 57406414 57406414 + Silent SNP G G A rs11537700 unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014225 exon4 c.G360A p.S120S . . . NLRP9 338321 hgsc.bcm.edu 36 19 60936295 60936295 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_176820 exon2 c.A714G p.Q238Q . . . ZNF470 388566 hgsc.bcm.edu 36 19 61781613 61781613 + Missense_Mutation SNP G G C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001001668 exon6 c.G2004C p.K668N . . . USP29 57663 hgsc.bcm.edu 36 19 62333346 62333346 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_020903 exon4 c.G1491A p.R497R . . . KLK2 3817 hgsc.bcm.edu 36 19 56069911 56069911 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001002231 exon2 c.C169A p.P57T KLK2,skin,NS,Substitution - Missense,0 . . CSMD3 114788 hgsc.bcm.edu 36 8 113718307 113718307 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_198123 exon22 c.G3630A p.S1210S . . . EXT1 2131 hgsc.bcm.edu 36 8 119192225 119192225 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000127 exon1 c.C242T p.S81F . . . COL14A1 7373 hgsc.bcm.edu 36 8 121289714 121289714 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_021110 exon11 c.T1254C p.Y418Y . . . ANXA13 312 hgsc.bcm.edu 36 8 124777121 124777121 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004306 exon5 c.G379T p.A127S . . . WISP1 8840 hgsc.bcm.edu 36 8 134306930 134306930 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_080838 exon3 c.C465T p.N155N . . . COL22A1 169044 hgsc.bcm.edu 36 8 139680198 139680198 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_152888 exon61 c.T4311C p.N1437N . . . MYST3 7994 hgsc.bcm.edu 36 8 41909173 41909173 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001099413 exon18 c.G5722A p.A1908T . . . MYST3 7994 hgsc.bcm.edu 36 8 41910468 41910468 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001099413 exon18 c.C4427T p.A1476V . . . TOX 9760 hgsc.bcm.edu 36 8 59890794 59890794 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014729 exon7 c.A1049G p.Q350R . . . ANGPT2 285 hgsc.bcm.edu 36 8 6372554 6372554 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001118888 exon2 c.T340G p.S114A . . . AGPAT5 55326 hgsc.bcm.edu 36 8 6575751 6575751 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018361 exon3 c.C401T p.A134V . . . STAU2 27067 hgsc.bcm.edu 36 8 74763589 74763589 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001164384 exon3 c.A32G p.Q11R . . . PXMP3 5828 hgsc.bcm.edu 36 8 78058617 78058617 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000318 exon4 c.A353C p.E118A . . . UTY 7404 hgsc.bcm.edu 36 Y 13956940 13956940 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_007125 exon16 c.A2440G p.K814E . . . KDM5D 8284 hgsc.bcm.edu 36 Y 20328928 20328928 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004653 exon24 c.A3492G p.P1164P . . . HIAT1 64645 hgsc.bcm.edu 36 1 100288098 100288098 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_033055 exon2 c.A130G p.I44V . . . UBE4B 10277 hgsc.bcm.edu 36 1 10143897 10143897 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001105562 exon23 c.T3164C p.M1055T . . . SLC25A24 29957 hgsc.bcm.edu 36 1 108480871 108480871 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_013386 exon10 c.T1361C p.V454A . . . OVGP1 5016 hgsc.bcm.edu 36 1 111767827 111767827 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_002557 exon5 c.C344T p.A115V . . . PTGFRN 5738 hgsc.bcm.edu 36 1 117305534 117305534 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_020440 exon5 c.C1360T p.R454C . . . NOTCH2 4853 hgsc.bcm.edu 36 1 120284768 120284768 + Missense_Mutation SNP G G A rs61755044 unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_024408 exon19 c.C3116T p.T1039M . . . VPS13D 55187 hgsc.bcm.edu 36 1 12491632 12491632 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018156 exon69 c.C13059T p.S4353S . . . ARNT 405 hgsc.bcm.edu 36 1 149062444 149062444 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001197325 exon13 c.T1199C p.V400A . . . ADAM15 8751 hgsc.bcm.edu 36 1 153293027 153293027 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_207195 exon4 c.G281A p.R94H . . . VSIG8 391123 hgsc.bcm.edu 36 1 158092982 158092982 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001013661 exon5 c.A728T p.N243I . . . EPHA2 1969 hgsc.bcm.edu 36 1 16334247 16334247 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004431 exon7 c.C1453T p.R485C . . . F5 2153 hgsc.bcm.edu 36 1 167778177 167778177 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000130 exon13 c.G2775T p.K925N . . . KIFAP3 22920 hgsc.bcm.edu 36 1 168218573 168218573 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014970 exon14 c.T1566G p.I522M . . . TDRD5 163589 hgsc.bcm.edu 36 1 177897936 177897936 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001199085 exon15 c.A2397G p.L799L . . . TOR1AIP2 163590 hgsc.bcm.edu 36 1 178082306 178082306 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_145034 exon6 c.C936T p.S312S . . . HMCN1 83872 hgsc.bcm.edu 36 1 184361493 184361493 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_031935 exon82 c.T12634G p.L4212V . . . HMCN1 83872 hgsc.bcm.edu 36 1 184414510 184414510 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_031935 exon104 c.A16283C p.D5428A . . . RNPEP 6051 hgsc.bcm.edu 36 1 200235673 200235673 + Nonsense_Mutation SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_020216 exon6 c.G1111T p.E371X . . . PLEKHA6 22874 hgsc.bcm.edu 36 1 202484572 202484572 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014935 exon12 c.G1824A p.T608T . . . EIF4G3 8672 hgsc.bcm.edu 36 1 21048511 21048511 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003760 exon24 c.A3704G p.H1235R . . . USH2A 7399 hgsc.bcm.edu 36 1 213915447 213915447 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_206933 exon63 c.G12429A p.S4143S . . . RRP15 51018 hgsc.bcm.edu 36 1 216571055 216571055 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_016052 exon5 c.A848G p.X283X . . . PARP1 142 hgsc.bcm.edu 36 1 224631501 224631501 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001618 exon13 c.C1872T p.N624N . . . LYST 1130 hgsc.bcm.edu 36 1 233954033 233954033 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000081 exon39 c.G9233A p.R3078H . . . OR2L2 26246 hgsc.bcm.edu 36 1 246268509 246268509 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001004686 exon1 c.T317C p.L106S . . . ARID1A 8289 hgsc.bcm.edu 36 1 26978453 26978453 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006015 exon20 c.A5477G p.D1826G . . . TMEM222 84065 hgsc.bcm.edu 36 1 27534465 27534465 + Missense_Mutation SNP C C G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032125 exon6 c.C548G p.A183G . . . ZMYM6 9204 hgsc.bcm.edu 36 1 35257736 35257736 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_007167 exon4 c.T233C p.V78A . . . CLSPN 63967 hgsc.bcm.edu 36 1 36003487 36003487 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001190481 exon2 c.G52A p.V18I . . . GRIK3 2899 hgsc.bcm.edu 36 1 37043324 37043324 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000831 exon15 c.C2416T p.P806S . . . GRIK3 2899 hgsc.bcm.edu 36 1 37055345 37055345 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000831 exon13 c.G1994A p.R665H . . . FHL3 2275 hgsc.bcm.edu 36 1 38237598 38237598 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004468 exon2 c.G74A p.G25D . . . MACF1 23499 hgsc.bcm.edu 36 1 39670839 39670839 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_012090 exon63 c.A11197G p.K3733E . . . IPO13 9670 hgsc.bcm.edu 36 1 44196748 44196748 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014652 exon10 c.C1778T p.A593V . . . ORC1L 4998 hgsc.bcm.edu 36 1 52619935 52619935 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001190818 exon14 c.T2100C p.F700F . . . ECHDC2 55268 hgsc.bcm.edu 36 1 53134839 53134839 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001198962 exon8 c.C676T p.R226W . . . CAMTA1 23261 hgsc.bcm.edu 36 1 7644409 7644409 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_015215 exon8 c.G701A p.S234N . . . LRRC8C 84230 hgsc.bcm.edu 36 1 89952493 89952493 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032270 exon3 c.A1776G p.T592T . . . TRPC6 7225 hgsc.bcm.edu 36 11 100852283 100852283 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004621 exon6 c.C1703T p.T568M . . . CRTAM 56253 hgsc.bcm.edu 36 11 122227642 122227642 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_019604 exon3 c.T225G p.H75Q . . . MYOD1 4654 hgsc.bcm.edu 36 11 17698010 17698010 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_002478 exon1 c.C105T p.F35F . . . KCNC1 3746 hgsc.bcm.edu 36 11 17714301 17714301 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004976 exon1 c.G176A p.R59H . . . SLC6A5 9152 hgsc.bcm.edu 36 11 20616608 20616608 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004211 exon13 c.G1897A p.D633N . . . METT5D1 196074 hgsc.bcm.edu 36 11 28189314 28189314 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_152636 exon4 c.T400C p.L134L . . . ACCS 84680 hgsc.bcm.edu 36 11 44057681 44057681 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032592 exon10 c.T858C p.D286D . . . NR1H3 10062 hgsc.bcm.edu 36 11 47237361 47237361 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_005693 exon2 c.G18A p.G6G . . . SLC43A3 29015 hgsc.bcm.edu 36 11 56931904 56931904 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_199329 exon14 c.C1413T p.F471F . . . PGA5 5222 hgsc.bcm.edu 36 11 60773742 60773742 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014224 exon7 c.G799A p.A267T . . . VWCE 220001 hgsc.bcm.edu 36 11 60789186 60789186 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_152718 exon17 c.C2040T p.C680C . . . FEN1 2237 hgsc.bcm.edu 36 11 61320035 61320035 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004111 exon2 c.T626C p.L209P . . . BEST1 7439 hgsc.bcm.edu 36 11 61486668 61486668 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004183 exon10 c.T1466C p.L489P . . . FAM160A2 84067 hgsc.bcm.edu 36 11 6196563 6196563 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032127 exon8 c.T1278C p.L426L . . . MARK2 2011 hgsc.bcm.edu 36 11 63419302 63419302 + Silent SNP T T A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_017490 exon2 c.T51A p.I17I . . . PLCB3 5331 hgsc.bcm.edu 36 11 63787574 63787574 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001184883 exon18 c.G2183A p.R728H . . . TPP1 1200 hgsc.bcm.edu 36 11 6594804 6594804 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000391 exon6 c.A665T p.N222I . . . CPT1A 1374 hgsc.bcm.edu 36 11 68285603 68285603 + Silent SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001031847 exon16 c.T2004G p.A668A . . . FOLR1 2348 hgsc.bcm.edu 36 11 71584718 71584718 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_016724 exon6 c.G623A p.R208H . . . ST5 6764 hgsc.bcm.edu 36 11 8695873 8695873 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_005418 exon8 c.G1620A p.P540P . . . NAALAD2 10003 hgsc.bcm.edu 36 11 89541789 89541789 + Missense_Mutation SNP C C G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_005467 exon12 c.C1323G p.N441K . . . PANX1 24145 hgsc.bcm.edu 36 11 93526419 93526419 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_015368 exon2 c.G296A p.G99E . . . KDM4D 55693 hgsc.bcm.edu 36 11 94370324 94370324 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018039 exon3 c.G140A p.G47D . . . MTMR2 8898 hgsc.bcm.edu 36 11 95209119 95209119 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_201278 exon16 c.T1395C p.T465T . . . ASCC3 10973 hgsc.bcm.edu 36 6 101179905 101179905 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006828 exon30 c.C4669A p.P1557T . . . BEND3 57673 hgsc.bcm.edu 36 6 107526462 107526462 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001080450 exon4 c.C226T p.R76W . . . SLC16A10 117247 hgsc.bcm.edu 36 6 111605525 111605525 + Silent SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018593 exon3 c.T906G p.L302L . . . IGF2R 3482 hgsc.bcm.edu 36 6 160405510 160405510 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G G A G G Unknown Valid Somatic Phase_I Capture Visver SOLID NM_000876 exon28 c.G3974A p.R1325H . . . QKI 9444 hgsc.bcm.edu 36 6 163907812 163907812 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006775 exon7 c.A1004C p.D335A . . . BRP44L 51660 hgsc.bcm.edu 36 6 166699468 166699468 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_016098 exon3 c.C288T p.G96G . . . AOF1 221656 hgsc.bcm.edu 36 6 18293990 18293990 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_153042 exon8 c.C543T p.T181T . . . TRIM27 5987 hgsc.bcm.edu 36 6 28980099 28980099 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006510 exon8 c.A1269G p.P423P . . . NCR3 259197 hgsc.bcm.edu 36 6 31665722 31665722 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_147130 exon2 c.T204C p.N68N . . . NOTCH4 4855 hgsc.bcm.edu 36 6 32288284 32288284 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004557 exon17 c.A2625T p.G875G . . . IP6K3 117283 hgsc.bcm.edu 36 6 33798529 33798529 + Silent SNP A A T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_054111 exon6 c.T1179A p.I393I . . . PRPF4B 8899 hgsc.bcm.edu 36 6 3987800 3987800 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003913 exon5 c.A1649G p.Q550R . . . MUT 4594 hgsc.bcm.edu 36 6 49529272 49529272 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000255 exon5 c.G1068A p.W356X . . . PKHD1 5314 hgsc.bcm.edu 36 6 51907040 51907040 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_170724 exon37 c.T5948G p.L1983R . . . PKHD1 5314 hgsc.bcm.edu 36 6 52042265 52042265 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_170724 exon11 c.G727A p.A243T . . . ICK 22858 hgsc.bcm.edu 36 6 53003840 53003840 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_016513 exon6 c.G340A p.A114T . . . C6orf150 115004 hgsc.bcm.edu 36 6 74195213 74195213 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_138441 exon4 c.T1157A p.I386N . . . DNAH9 1770 hgsc.bcm.edu 36 17 11491197 11491197 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001372 exon12 c.G2054A p.R685H . . . CENPV 201161 hgsc.bcm.edu 36 17 16186912 16186912 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_181716 exon5 c.G763A p.D255N . . . MAP2K3 5606 hgsc.bcm.edu 36 17 21144850 21144850 + Silent SNP G G A rs56166328 unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_002756 exon5 c.G264A p.T88T . . . CCDC55 84081 hgsc.bcm.edu 36 17 25530346 25530346 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032141 exon5 c.A413C p.D138A . . . TRPV3 162514 hgsc.bcm.edu 36 17 3374383 3374383 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_145068 exon13 c.A1602G p.I534M . . . PLXDC1 57125 hgsc.bcm.edu 36 17 34479781 34479781 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_020405 exon13 c.C1237A p.L413M . . . GSDMB 55876 hgsc.bcm.edu 36 17 35326965 35326965 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001042471 exon2 c.G131A p.R44K . . . KRT36 8689 hgsc.bcm.edu 36 17 36897400 36897400 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003771 exon4 c.T815C p.L272P . . . ATP6V0A1 535 hgsc.bcm.edu 36 17 37892724 37892724 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001130021 exon10 c.G836A p.R279H . . . NAGLU 4669 hgsc.bcm.edu 36 17 37946654 37946654 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000263 exon5 c.T925C p.Y309H . . . ETV4 2118 hgsc.bcm.edu 36 17 38969354 38969354 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001986 exon5 c.T222C p.D74D . . . SNX11 29916 hgsc.bcm.edu 36 17 43553831 43553831 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_013323 exon7 c.T775G p.L259V . . . SKAP1 8631 hgsc.bcm.edu 36 17 43778315 43778315 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001075099 exon4 c.C231T p.G77G . . . NOL11 25926 hgsc.bcm.edu 36 17 63160954 63160954 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_015462 exon8 c.A867G p.V289V . . . GPR142 350383 hgsc.bcm.edu 36 17 69878352 69878352 + Silent SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_181790 exon3 c.G456T p.P152P . . . ASGR1 432 hgsc.bcm.edu 36 17 7020881 7020881 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001197216 exon4 c.T230C p.L77P . . . CXADR 1525 hgsc.bcm.edu 36 21 17859645 17859645 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001338 exon7 c.A862G p.T288A . . . RNF160 26046 hgsc.bcm.edu 36 21 29254823 29254823 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_015565 exon12 c.A2378T p.N793I . . . RWDD2B 10069 hgsc.bcm.edu 36 21 29302618 29302618 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_016940 exon2 c.A263T p.N88I . . . TIAM1 7074 hgsc.bcm.edu 36 21 31517670 31517670 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003253 exon9 c.C1918A p.L640I . . . BRWD1 54014 hgsc.bcm.edu 36 21 39496275 39496275 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_033656 exon38 c.C4431T p.T1477T . . . ATF7IP2 80063 hgsc.bcm.edu 36 16 10439581 10439581 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_024997 exon4 c.T1083C p.A361A . . . TNFRSF17 608 hgsc.bcm.edu 36 16 11967587 11967587 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001192 exon2 c.T165G p.I55M . . . DCUN1D3 123879 hgsc.bcm.edu 36 16 20778945 20778945 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_173475 exon3 c.T679G p.F227V . . . DNAH3 55567 hgsc.bcm.edu 36 16 20883326 20883326 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_017539 exon53 c.T9381C p.I3127I . . . DNAH3 55567 hgsc.bcm.edu 36 16 21036126 21036126 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_017539 exon12 c.T1713C p.Y571Y . . . GTF3C1 2975 hgsc.bcm.edu 36 16 27424777 27424777 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001520 exon10 c.G1714A p.D572N . . . SHCBP1 79801 hgsc.bcm.edu 36 16 45175069 45175069 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_024745 exon12 c.A1553T p.D518V . . . PMFBP1 83449 hgsc.bcm.edu 36 16 70720521 70720521 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001160213 exon14 c.T1460G p.L487R . . . ZFHX3 463 hgsc.bcm.edu 36 16 71387192 71387192 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006885 exon9 c.C6890T p.A2297V . . . ADAT1 23536 hgsc.bcm.edu 36 16 74199629 74199629 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_012091 exon9 c.A1283G p.Q428R . . . ADAMTS18 170692 hgsc.bcm.edu 36 16 75891680 75891680 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_199355 exon17 c.C2655T p.C885C . . . MBTPS1 8720 hgsc.bcm.edu 36 16 82690199 82690199 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003791 exon3 c.G381A p.T127T . . . LPIN2 9663 hgsc.bcm.edu 36 18 2941184 2941184 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014646 exon4 c.A459C p.K153N . . . FHOD3 80206 hgsc.bcm.edu 36 18 32428814 32428814 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_025135 exon7 c.G673A p.A225T . . . MC4R 4160 hgsc.bcm.edu 36 18 56189722 56189722 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_005912 exon1 c.A841G p.M281V . . . CCDC102B 79839 hgsc.bcm.edu 36 18 64872349 64872349 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001093729 exon10 c.T1537C p.W513R . . . ENOSF1 55556 hgsc.bcm.edu 36 18 680585 680585 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001126123 exon7 c.C336T p.C112C . . . C18orf55 29090 hgsc.bcm.edu 36 18 69976459 69976459 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014177 exon5 c.A610G p.K204E . . . CNDP1 84735 hgsc.bcm.edu 36 18 70398354 70398354 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032649 exon10 c.A1176G p.R392R . . . SALL3 27164 hgsc.bcm.edu 36 18 74858008 74858008 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_171999 exon3 c.G3601T p.A1201S . . . TFG 10342 hgsc.bcm.edu 36 3 101946411 101946411 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006070 exon7 c.C766T p.Q256X . . . MORC1 27136 hgsc.bcm.edu 36 3 110181140 110181140 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014429 exon24 c.A2389C p.S797R . . . NR1I2 8856 hgsc.bcm.edu 36 3 121016889 121016889 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003889 exon7 c.A967G p.M323V . . . SEC61A1 29927 hgsc.bcm.edu 36 3 129266436 129266436 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_013336 exon8 c.G643A p.A215T . . . IFT122 55764 hgsc.bcm.edu 36 3 130721770 130721770 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_052990 exon27 c.G3368A p.R1123H . . . PIK3R4 30849 hgsc.bcm.edu 36 3 131935390 131935390 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014602 exon4 c.T1142C p.V381A . . . NUP210 23225 hgsc.bcm.edu 36 3 13348805 13348805 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_024923 exon29 c.T3923G p.L1308R . . . ACPP 55 hgsc.bcm.edu 36 3 133519067 133519067 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001099 exon1 c.T77C p.L26P . . . SLC25A36 55186 hgsc.bcm.edu 36 3 142158123 142158123 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001104647 exon2 c.T106C p.S36P . . . XRN1 54464 hgsc.bcm.edu 36 3 143584924 143584924 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_019001 exon22 c.C2524A p.R842S . . . TRPC1 7220 hgsc.bcm.edu 36 3 143986566 143986566 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003304 exon6 c.A1189T p.I397F . . . PCOLCE2 26577 hgsc.bcm.edu 36 3 144049937 144049937 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_013363 exon3 c.G260A p.R87H . . . P2RY14 9934 hgsc.bcm.edu 36 3 152414368 152414368 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014879 exon3 c.G427A p.V143M . . . IGSF10 285313 hgsc.bcm.edu 36 3 152657553 152657553 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_178822 exon2 c.G275A p.G92D . . . HACL1 26061 hgsc.bcm.edu 36 3 15588196 15588196 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_012260 exon12 c.A1078G p.N360D . . . SMC4 10051 hgsc.bcm.edu 36 3 161614992 161614992 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001002800 exon9 c.A1265G p.K422R . . . FNDC3B 64778 hgsc.bcm.edu 36 3 173507969 173507969 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001135095 exon10 c.T1184C p.L395P . . . RTP2 344892 hgsc.bcm.edu 36 3 188899082 188899082 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001004312 exon2 c.C576T p.S192S . . . ATP13A4 84239 hgsc.bcm.edu 36 3 194755229 194755229 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032279 exon1 c.T54C p.N18N . . . OPA1 4976 hgsc.bcm.edu 36 3 194844518 194844518 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_130832 exon14 c.A1319G p.H440R . . . GOLGA4 2803 hgsc.bcm.edu 36 3 37318762 37318762 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001172713 exon11 c.G1235A p.R412H . . . SCN11A 11280 hgsc.bcm.edu 36 3 38913455 38913455 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014139 exon14 c.G2288A p.R763H . . . SEC22C 9117 hgsc.bcm.edu 36 3 42572439 42572439 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004206 exon6 c.C698T p.A233V . . . IP6K2 51447 hgsc.bcm.edu 36 3 48707553 48707553 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001190317 exon3 c.T350C p.M117T . . . CCDC71 64925 hgsc.bcm.edu 36 3 49175346 49175346 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_022903 exon2 c.C1300T p.R434W . . . LRTM1 57408 hgsc.bcm.edu 36 3 54934116 54934116 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_020678 exon2 c.A174C p.Q58H . . . FLNB 2317 hgsc.bcm.edu 36 3 58129330 58129330 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001164317 exon45 c.T7415C p.M2472T . . . C3orf67 200844 hgsc.bcm.edu 36 3 58824389 58824389 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_198463 exon12 c.A1153G p.N385D . . . FEZF2 55079 hgsc.bcm.edu 36 3 62332011 62332011 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018008 exon4 c.G1041A p.T347T . . . ADAMTS9 56999 hgsc.bcm.edu 36 3 64522464 64522464 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_182920 exon30 c.T4528G p.S1510A . . . MITF 4286 hgsc.bcm.edu 36 3 70091192 70091192 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_198158 exon8 c.C771T p.R257R . . . RAD18 56852 hgsc.bcm.edu 36 3 8980034 8980034 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_020165 exon1 c.C36T p.G12G . . . TADA3L 10474 hgsc.bcm.edu 36 3 9806469 9806469 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_133480 exon3 c.A386G p.K129R . . . ANO4 121601 hgsc.bcm.edu 36 12 100029587 100029587 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_178826 exon23 c.A2313G p.G771G . . . CCDC60 160777 hgsc.bcm.edu 36 12 118453109 118453109 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_178499 exon13 c.G1409A p.R470H . . . CIT 11113 hgsc.bcm.edu 36 12 118636499 118636499 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_007174 exon32 c.C4066T p.R1356C . . . MANSC1 54682 hgsc.bcm.edu 36 12 12374424 12374424 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018050 exon4 c.C1100T p.S367F . . . GSG1 83445 hgsc.bcm.edu 36 12 13129408 13129408 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001080554 exon7 c.G907A p.G303S . . . ZNF140 7699 hgsc.bcm.edu 36 12 132192272 132192272 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003440 exon5 c.T336C p.P112P . . . ARHGDIB 397 hgsc.bcm.edu 36 12 14994769 14994769 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001175 exon2 c.A145G p.K49E . . . KRAS 3845 hgsc.bcm.edu 36 12 25289551 25289551 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004985 exon2 c.G35A p.G12D KRAS,haematopoietic_and_lymphoid_tissue,NS,Substitution - Missense,0 . . RASSF8 11228 hgsc.bcm.edu 36 12 26108797 26108797 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_007211 exon4 c.A203C p.Q68P . . . CCDC91 55297 hgsc.bcm.edu 36 12 28593327 28593327 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018318 exon12 c.A1280C p.K427T . . . FAR2 55711 hgsc.bcm.edu 36 12 29361190 29361190 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018099 exon9 c.C1105T p.R369W . . . IPO8 10526 hgsc.bcm.edu 36 12 30720728 30720728 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006390 exon6 c.C700T p.R234X . . . PDZRN4 29951 hgsc.bcm.edu 36 12 40247961 40247961 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001164595 exon9 c.T1577C p.V526A . . . AMIGO2 347902 hgsc.bcm.edu 36 12 45757759 45757759 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_181847 exon2 c.A1294G p.K432E . . . ERBB3 2065 hgsc.bcm.edu 36 12 54765121 54765121 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001005915 exon3 c.G310T p.V104L ERBB3,ovary,NS,Substitution - Missense,0 . . LRIG3 121227 hgsc.bcm.edu 36 12 57570720 57570720 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_153377 exon4 c.A509C p.K170T . . . KRR1 11103 hgsc.bcm.edu 36 12 74179880 74179880 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_007043 exon10 c.A1122G p.E374E . . . LRRIQ1 84125 hgsc.bcm.edu 36 12 83974944 83974944 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032165 exon8 c.T2242C p.S748P . . . USP44 84101 hgsc.bcm.edu 36 12 94442588 94442588 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001042403 exon4 c.A1732G p.R578G . . . TARSL2 123283 hgsc.bcm.edu 36 15 100041845 100041845 + Missense_Mutation SNP G G A rs34201431 unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_152334 exon12 c.C1606T p.R536C . . . GPR176 11245 hgsc.bcm.edu 36 15 37881437 37881437 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_007223 exon3 c.C736T p.R246W . . . CDAN1 146059 hgsc.bcm.edu 36 15 40807250 40807250 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_138477 exon23 c.G2957T p.R986M . . . GALK2 2585 hgsc.bcm.edu 36 15 47371847 47371847 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_002044 exon8 c.A788G p.D263G . . . GCOM1 145781 hgsc.bcm.edu 36 15 55701106 55701106 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_152451 exon4 c.C327T p.A109A . . . SLTM 79811 hgsc.bcm.edu 36 15 56969788 56969788 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_024755 exon15 c.G2063A p.R688H . . . ZWILCH 55055 hgsc.bcm.edu 36 15 64598381 64598381 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_017975 exon5 c.A431G p.D144G . . . LARP6 55323 hgsc.bcm.edu 36 15 68911986 68911986 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018357 exon3 c.C935T p.A312V . . . PTPN9 5780 hgsc.bcm.edu 36 15 73585309 73585309 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_002833 exon7 c.G730A p.A244T . . . ALPK3 57538 hgsc.bcm.edu 36 15 83184459 83184459 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_020778 exon5 c.G1551A p.K517K . . . UNC45A 55898 hgsc.bcm.edu 36 15 89284671 89284671 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001039675 exon9 c.T606C p.R202R . . . ADH6 130 hgsc.bcm.edu 36 4 100350468 100350468 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000672 exon5 c.A361C p.T121P . . . PHF17 79960 hgsc.bcm.edu 36 4 129989699 129989699 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_199320 exon5 c.C411A p.S137R . . . PRMT10 90826 hgsc.bcm.edu 36 4 148794625 148794625 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_138364 exon9 c.G1873A p.A625T . . . NR3C2 4306 hgsc.bcm.edu 36 4 149400695 149400695 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001166104 exon3 c.T1782C p.T594T . . . LRBA 987 hgsc.bcm.edu 36 4 151993213 151993213 + Silent SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006726 exon23 c.T3099G p.T1033T . . . FBXW7 55294 hgsc.bcm.edu 36 4 153473238 153473238 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018315 exon5 c.T705C p.A235A FBXW7,stomach,NS,Substitution - Missense,-2 . . FGA 2243 hgsc.bcm.edu 36 4 155725235 155725235 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000508 exon6 c.A2092C p.S698R . . . GLRB 2743 hgsc.bcm.edu 36 4 158311112 158311112 + Missense_Mutation SNP T T A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001166060 exon10 c.T1276A p.L426I . . . NPY1R 4886 hgsc.bcm.edu 36 4 164467057 164467057 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000909 exon2 c.C100A p.H34N . . . SPOCK3 50859 hgsc.bcm.edu 36 4 168070368 168070368 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_016950 exon6 c.A461G p.D154G . . . DDX60 55601 hgsc.bcm.edu 36 4 169383394 169383394 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_017631 exon34 c.T4542C p.L1514L . . . FBXO8 26269 hgsc.bcm.edu 36 4 175398903 175398903 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_012180 exon4 c.G498A p.S166S . . . POLN 353497 hgsc.bcm.edu 36 4 2099732 2099732 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_181808 exon17 c.C1888T p.R630C . . . LIMCH1 22998 hgsc.bcm.edu 36 4 41302773 41302773 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001112717 exon6 c.C481T p.R161X . . . WDR21B 285429 hgsc.bcm.edu 36 4 41678784 41678784 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001029955 exon1 c.G218A p.R73Q . . . GABRG1 2565 hgsc.bcm.edu 36 4 45762281 45762281 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_173536 exon4 c.T399C p.L133L . . . PDE6B 5158 hgsc.bcm.edu 36 4 646335 646335 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001145292 exon12 c.C923A p.A308D . . . GC 2638 hgsc.bcm.edu 36 4 72841403 72841403 + Silent SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000583 exon8 c.T924G p.V308V . . . RASSF6 166824 hgsc.bcm.edu 36 4 74678098 74678098 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_177532 exon4 c.T221C p.I74T . . . CXCL11 6373 hgsc.bcm.edu 36 4 77175511 77175511 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_005409 exon2 c.A70G p.M24V . . . ACOX3 8310 hgsc.bcm.edu 36 4 8462907 8462907 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003501 exon6 c.G619A p.A207T . . . NUDT9 53343 hgsc.bcm.edu 36 4 88598113 88598113 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_198038 exon8 c.T819C p.S273S . . . ABCG2 9429 hgsc.bcm.edu 36 4 89253673 89253673 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004827 exon9 c.G1000A p.E334K . . . MMRN1 22915 hgsc.bcm.edu 36 4 91075216 91075216 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_007351 exon6 c.T1362C p.T454T . . . GRID2 2895 hgsc.bcm.edu 36 4 94357059 94357059 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001510 exon6 c.A937C p.K313Q . . . TRMT2B 79979 hgsc.bcm.edu 36 X 100162747 100162747 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001167970 exon10 c.T1065C p.T355T . . . ODZ1 10178 hgsc.bcm.edu 36 X 123482169 123482169 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014253 exon18 c.A3180G p.V1060V . . . PLAC1 10761 hgsc.bcm.edu 36 X 133528171 133528171 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_021796 exon3 c.G208A p.A70T . . . LDOC1 23641 hgsc.bcm.edu 36 X 140098640 140098640 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_012317 exon1 c.A233G p.N78S . . . MTM1 4534 hgsc.bcm.edu 36 X 149577064 149577064 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000252 exon11 c.C1166T p.A389V . . . RAB39B 116442 hgsc.bcm.edu 36 X 154146730 154146730 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_171998 exon1 c.T38A p.V13D . . . MAP3K15 389840 hgsc.bcm.edu 36 X 19323123 19323123 + Missense_Mutation SNP C C G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001001671 exon16 c.G2191C p.G731R . . . CNKSR2 22866 hgsc.bcm.edu 36 X 21537118 21537118 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001168649 exon19 c.C2007T p.C669C . . . MAOB 4129 hgsc.bcm.edu 36 X 43541403 43541403 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000898 exon6 c.C531T p.T177T . . . USP11 8237 hgsc.bcm.edu 36 X 46991688 46991688 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004651 exon19 c.A2591T p.E864V . . . SHROOM2 357 hgsc.bcm.edu 36 X 9801820 9801820 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001649 exon2 c.G294A p.K98K . . . ODC1 4953 hgsc.bcm.edu 36 2 10501079 10501079 + Silent SNP A A T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_002539 exon7 c.T654A p.V218V . . . LCT 3938 hgsc.bcm.edu 36 2 136277997 136277997 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_002299 exon11 c.G4636A p.G1546S . . . LRP1B 53353 hgsc.bcm.edu 36 2 141176196 141176196 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018557 exon39 c.A6286G p.I2096V . . . LRP1B 53353 hgsc.bcm.edu 36 2 141176542 141176542 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018557 exon38 c.G6074A p.R2025H . . . SCN2A 6326 hgsc.bcm.edu 36 2 165909516 165909516 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001040143 exon15 c.G2768A p.W923X . . . SCN2A 6326 hgsc.bcm.edu 36 2 165954483 165954483 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001040143 exon26 c.C5921T p.S1974L . . . AGPS 8540 hgsc.bcm.edu 36 2 178014003 178014003 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003659 exon6 c.A702G p.P234P . . . ZNF804A 91752 hgsc.bcm.edu 36 2 185439407 185439407 + Nonsense_Mutation SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_194250 exon2 c.G178T p.E60X . . . MYO1B 4430 hgsc.bcm.edu 36 2 191936801 191936801 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_012223 exon10 c.T868C p.S290P . . . OBFC2A 64859 hgsc.bcm.edu 36 2 192258668 192258668 + Missense_Mutation SNP A A T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001031716 exon6 c.A544T p.T182S . . . CASP8 841 hgsc.bcm.edu 36 2 201839461 201839461 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_033356 exon2 c.T7G p.F3V . . . APOB 338 hgsc.bcm.edu 36 2 21111197 21111197 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000384 exon8 c.T900C p.G300G . . . ERBB4 2066 hgsc.bcm.edu 36 2 212520472 212520472 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_005235 exon3 c.T349C p.L117L . . . ABCA12 26154 hgsc.bcm.edu 36 2 215531304 215531304 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_173076 exon41 c.A6059C p.Q2020P . . . ABCA12 26154 hgsc.bcm.edu 36 2 215553590 215553590 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_173076 exon31 c.G4602A p.T1534T . . . IL8RB 3579 hgsc.bcm.edu 36 2 218708689 218708689 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001557 exon3 c.G920T p.S307I . . . SP100 6672 hgsc.bcm.edu 36 2 231077211 231077211 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001080391 exon21 c.A1832G p.E611G . . . ILKAP 80895 hgsc.bcm.edu 36 2 238757046 238757046 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_030768 exon8 c.T701C p.L234P . . . PASK 23178 hgsc.bcm.edu 36 2 241730936 241730936 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_015148 exon2 c.C185T p.T62I . . . DNAJC27 51277 hgsc.bcm.edu 36 2 25034234 25034234 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001198559 exon4 c.T354C p.L118L . . . OTOF 9381 hgsc.bcm.edu 36 2 26556616 26556616 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_194248 exon16 c.G1871T p.R624L . . . CENPA 1058 hgsc.bcm.edu 36 2 26868504 26868504 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001042426 exon2 c.C102T p.G34G . . . DHX57 90957 hgsc.bcm.edu 36 2 38923825 38923825 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_198963 exon12 c.C2251T p.R751W . . . FBXO11 80204 hgsc.bcm.edu 36 2 47913095 47913095 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001190274 exon11 c.C1295T p.A432V . . . KLRAQ1 129285 hgsc.bcm.edu 36 2 48551767 48551767 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001135629 exon10 c.G935A p.R312H . . . MBOAT2 129642 hgsc.bcm.edu 36 2 8934708 8934708 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_138799 exon7 c.A593G p.Y198C . . . PROM2 150696 hgsc.bcm.edu 36 2 95309321 95309321 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_144707 exon11 c.T1276C p.W426R . . . TMEFF1 8577 hgsc.bcm.edu 36 9 102349988 102349988 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_003692 exon6 c.T702G p.H234Q . . . C9orf125 84302 hgsc.bcm.edu 36 9 103279081 103279081 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032342 exon2 c.G115A p.A39T . . . SLC44A1 23446 hgsc.bcm.edu 36 9 107176744 107176744 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_080546 exon13 c.C1539T p.T513T . . . ZNF462 58499 hgsc.bcm.edu 36 9 108729157 108729157 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_021224 exon3 c.A3143G p.H1048R . . . COL27A1 85301 hgsc.bcm.edu 36 9 116060657 116060657 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032888 exon28 c.C3157T p.R1053X . . . PAPPA 5069 hgsc.bcm.edu 36 9 117989881 117989881 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_002581 exon2 c.G1043A p.R348H . . . PAPPA 5069 hgsc.bcm.edu 36 9 118037651 118037651 + Missense_Mutation SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_002581 exon7 c.G2646T p.K882N . . . MORN5 254956 hgsc.bcm.edu 36 9 124002014 124002014 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_198469 exon5 c.A469G p.T157A . . . NEK6 10783 hgsc.bcm.edu 36 9 126129472 126129472 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001166167 exon7 c.G603A p.T201T . . . LRRC8A 56262 hgsc.bcm.edu 36 9 130710885 130710885 + Missense_Mutation SNP C C G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_019594 exon3 c.C1621G p.R541G . . . ABL1 25 hgsc.bcm.edu 36 9 132738212 132738212 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_005157 exon6 c.T1052C p.M351T ABL1,haematopoietic_and_lymphoid_tissue,NS,Substitution - Missense,0 . . LAMC3 10319 hgsc.bcm.edu 36 9 132910816 132910816 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006059 exon8 c.C1467T p.C489C . . . C9orf171 389799 hgsc.bcm.edu 36 9 134408223 134408223 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_207417 exon6 c.G808A p.D270N . . . SLC24A2 25769 hgsc.bcm.edu 36 9 19506186 19506186 + Nonsense_Mutation SNP C C A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_020344 exon11 c.G1951T p.E651X . . . C9orf82 79886 hgsc.bcm.edu 36 9 26874813 26874813 + Silent SNP G G C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_024828 exon4 c.C660G p.V220V . . . NOL6 65083 hgsc.bcm.edu 36 9 33453428 33453428 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_022917 exon24 c.G3006A p.R1002R . . . DNAJB5 25822 hgsc.bcm.edu 36 9 34986474 34986474 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001135005 exon3 c.G640A p.G214S . . . FANCG 2189 hgsc.bcm.edu 36 9 35066548 35066548 + Silent SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004629 exon8 c.G957A p.P319P . . . MAK10 60560 hgsc.bcm.edu 36 9 87766791 87766791 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_024635 exon6 c.C392T p.T131M . . . IPPK 64768 hgsc.bcm.edu 36 9 94437323 94437323 + Silent SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_022755 exon10 c.C1005A p.I335I . . . BICD2 23299 hgsc.bcm.edu 36 9 94524880 94524880 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_015250 exon3 c.G485A p.R162H . . . EFNB2 1948 hgsc.bcm.edu 36 13 105943497 105943497 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004093 exon5 c.C894T p.S298S . . . MYO16 23026 hgsc.bcm.edu 36 13 108575546 108575546 + Silent SNP G G T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001198950 exon30 c.G3621T p.L1207L . . . TUBA3C 7278 hgsc.bcm.edu 36 13 18646202 18646202 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006001 exon5 c.C1154T p.A385V . . . EFHA1 221154 hgsc.bcm.edu 36 13 20965402 20965402 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_152726 exon12 c.A1291G p.K431E . . . SPATA13 221178 hgsc.bcm.edu 36 13 23769756 23769756 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001166271 exon11 c.G3466A p.V1156I . . . KL 9365 hgsc.bcm.edu 36 13 32536073 32536073 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004795 exon5 c.A2789G p.Y930C . . . SETDB2 83852 hgsc.bcm.edu 36 13 48933249 48933249 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001160308 exon3 c.T158C p.M53T . . . KPNA3 3839 hgsc.bcm.edu 36 13 49194674 49194674 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_002267 exon8 c.C496T p.L166F . . . ALG11 440138 hgsc.bcm.edu 36 13 51496603 51496603 + Missense_Mutation SNP C C A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001004127 exon3 c.C736A p.L246I . . . PCDH17 27253 hgsc.bcm.edu 36 13 57106005 57106005 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001040429 exon1 c.A1324G p.I442V . . . PCDH17 27253 hgsc.bcm.edu 36 13 57106074 57106074 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001040429 exon1 c.G1393A p.E465K . . . ATP11A 23250 hgsc.bcm.edu 36 13 112508574 112508576 + In_Frame_Del DEL TCT TCT - novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 TCT TCT . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_015205 exon4 c.299_301del p.100_101del . . . CHUK 1147 hgsc.bcm.edu 36 10 101940620 101940620 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001278 exon20 c.T2204C p.M735T . . . PPRC1 23082 hgsc.bcm.edu 36 10 103898978 103898978 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_015062 exon13 c.T4793C p.I1598T . . . NOLC1 9221 hgsc.bcm.edu 36 10 103909009 103909009 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_004741 exon6 c.G677A p.S226N . . . CNNM2 54805 hgsc.bcm.edu 36 10 104677127 104677127 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_199077 exon2 c.T1657C p.X553R . . . ITPRIP 85450 hgsc.bcm.edu 36 10 106064854 106064854 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_033397 exon3 c.G946A p.A316T . . . SORCS3 22986 hgsc.bcm.edu 36 10 106966793 106966793 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014978 exon19 c.C2657T p.A886V . . . TACC2 10579 hgsc.bcm.edu 36 10 123960973 123960973 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006997 exon3 c.A1277G p.N426S . . . BCCIP 56647 hgsc.bcm.edu 36 10 127512343 127512343 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_016567 exon6 c.G612A p.A204A . . . MKI67 4288 hgsc.bcm.edu 36 10 129803682 129803682 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_002417 exon7 c.A980G p.Q327R . . . FAM171A1 221061 hgsc.bcm.edu 36 10 15303023 15303023 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001010924 exon6 c.G797A p.G266D . . . GAD2 2572 hgsc.bcm.edu 36 10 26621916 26621916 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001134366 exon15 c.G1574A p.R525H . . . BMS1 9790 hgsc.bcm.edu 36 10 42608008 42608008 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014753 exon7 c.T841C p.S281P . . . PRKG1 5592 hgsc.bcm.edu 36 10 53718550 53718550 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_006258 exon15 c.G1768A p.D590N . . . ZNF365 22891 hgsc.bcm.edu 36 10 63829430 63829430 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_014951 exon5 c.C1100T p.A367V . . . PBLD 64081 hgsc.bcm.edu 36 10 69713976 69713976 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_022129 exon10 c.T831C p.G277G . . . PCDH21 92211 hgsc.bcm.edu 36 10 85947530 85947530 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001171971 exon4 c.T306C p.D102D . . . NOC3L 64318 hgsc.bcm.edu 36 10 96102675 96102675 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_022451 exon7 c.C826T p.R276W . . . NOC3L 64318 hgsc.bcm.edu 36 10 96106934 96106934 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_022451 exon4 c.T495C p.T165T . . . HELLS 3070 hgsc.bcm.edu 36 10 96340496 96340496 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_018063 exon15 c.T1740C p.P580P . . . APC 324 hgsc.bcm.edu 36 5 112203202 112203202 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001127511 exon14 c.C3958T p.Q1320X APC,large_intestine,colon,Substitution - Nonsense,0 . . DCP2 167227 hgsc.bcm.edu 36 5 112371632 112371632 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_152624 exon9 c.T1041C p.S347S . . . HSD17B4 3295 hgsc.bcm.edu 36 5 118889597 118889597 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000414 exon19 c.T1660C p.S554P . . . FNIP1 96459 hgsc.bcm.edu 36 5 131010712 131010712 + Missense_Mutation SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_133372 exon17 c.T3392G p.V1131G . . . IL3 3562 hgsc.bcm.edu 36 5 131425967 131425967 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_000588 exon3 c.G268A p.A90T . . . DNAH5 1767 hgsc.bcm.edu 36 5 13819267 13819267 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001369 exon59 c.G9919A p.A3307T . . . PCDHB5 26167 hgsc.bcm.edu 36 5 140495613 140495613 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_015669 exon1 c.T413C p.M138T . . . PCDHB16 57717 hgsc.bcm.edu 36 5 140543054 140543054 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_020957 exon1 c.A736G p.I246V . . . PCDHGA12 26025 hgsc.bcm.edu 36 5 140791949 140791949 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_032094 exon1 c.A1439G p.D480G . . . TCERG1 10915 hgsc.bcm.edu 36 5 145843351 145843351 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001040006 exon13 c.G2015A p.R672Q . . . NMUR2 56923 hgsc.bcm.edu 36 5 151755302 151755302 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_020167 exon3 c.C848T p.P283L . . . FAM71B 153745 hgsc.bcm.edu 36 5 156525705 156525705 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_130899 exon1 c.T53C p.M18T . . . NSD1 64324 hgsc.bcm.edu 36 5 176651638 176651638 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_022455 exon22 c.A6336G p.E2112E . . . HNRNPAB 3182 hgsc.bcm.edu 36 5 177569769 177569769 + Missense_Mutation SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_031266 exon7 c.G818A p.G273D . . . ZNF454 285676 hgsc.bcm.edu 36 5 178324922 178324922 + Missense_Mutation SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_182594 exon5 c.T911C p.I304T . . . CDH9 1007 hgsc.bcm.edu 36 5 26942591 26942591 + Nonsense_Mutation SNP C C A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_016279 exon4 c.G637T p.E213X . . . AGXT2 64902 hgsc.bcm.edu 36 5 35049913 35049913 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_031900 exon10 c.C1032T p.D344D . . . NUP155 9631 hgsc.bcm.edu 36 5 37345055 37345055 + Silent SNP T T C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_153485 exon24 c.A2700G p.S900S . . . HMGCS1 3157 hgsc.bcm.edu 36 5 43329970 43329970 + Silent SNP A A C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_002130 exon7 c.T1128G p.G376G . . . PARP8 79668 hgsc.bcm.edu 36 5 50173649 50173649 + Missense_Mutation SNP C C T novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001178055 exon27 c.C2555T p.A852V . . . CD180 4064 hgsc.bcm.edu 36 5 66515744 66515744 + Missense_Mutation SNP T T G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_005582 exon3 c.A683C p.N228T . . . ZCCHC9 84240 hgsc.bcm.edu 36 5 80636470 80636470 + Silent SNP G G A novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001131036 exon2 c.G138A p.R46R . . . VCAN 1462 hgsc.bcm.edu 36 5 82871619 82871619 + Silent SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001164097 exon7 c.A4080G p.A1360A . . . LNPEP 4012 hgsc.bcm.edu 36 5 96376435 96376435 + Missense_Mutation SNP G G C novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_005575 exon13 c.G2256C p.L752F . . . CHD1 1105 hgsc.bcm.edu 36 5 98240161 98240161 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID NM_001270 exon23 c.T3239C p.I1080T . . . VNN3 55350 hgsc.bcm.edu 36 6 133089685 133089685 + Missense_Mutation SNP A A G novel unknown TCGA-AA-A00A-01A-01W-A005-10 TCGA-AA-A00A-10A-01W-A005-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID . . . . . . .