Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID SDK1 221935 hgsc.bcm.edu 36 7 4120412 4120412 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 NXPH1 30010 hgsc.bcm.edu 36 7 8757619 8757619 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CCM2 83605 hgsc.bcm.edu 36 7 45070722 45070722 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 NACAD 23148 hgsc.bcm.edu 36 7 45090509 45090509 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 VSTM2A 222008 hgsc.bcm.edu 36 7 54579928 54579928 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 PPP1R9A 55607 hgsc.bcm.edu 36 7 94735881 94735881 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 BUD31 8896 hgsc.bcm.edu 36 7 98846658 98846658 + Nonsense_Mutation SNP A A T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 GNB2 2783 hgsc.bcm.edu 36 7 100113090 100113090 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 MUC17 140453 hgsc.bcm.edu 36 7 100471013 100471013 + Missense_Mutation SNP C C G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 MUC17 140453 hgsc.bcm.edu 36 7 100473662 100473662 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CTTNBP2 83992 hgsc.bcm.edu 36 7 117219844 117219844 + Silent SNP G G T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 C7orf58 79974 hgsc.bcm.edu 36 7 120527370 120527370 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CHRM2 1129 hgsc.bcm.edu 36 7 136351103 136351103 + Silent SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 BRAF 673 hgsc.bcm.edu 36 7 140099605 140099605 + Missense_Mutation SNP A A T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SSPO 23145 hgsc.bcm.edu 36 7 149107618 149107618 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 HTR5A 3361 hgsc.bcm.edu 36 7 154493992 154493992 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TMC2 117532 hgsc.bcm.edu 36 20 2465922 2465922 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DEFB124 245937 hgsc.bcm.edu 36 20 29517033 29517033 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 EMID1 129080 hgsc.bcm.edu 36 22 27984924 27984924 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SLC39A2 29986 hgsc.bcm.edu 36 14 20538976 20538976 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SALL2 6297 hgsc.bcm.edu 36 14 21061096 21061096 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 PCNX 22990 hgsc.bcm.edu 36 14 70645135 70645135 + Silent SNP C C G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 BRF1 2972 hgsc.bcm.edu 36 14 104755051 104755051 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SIRT6 51548 hgsc.bcm.edu 36 19 4133514 4133514 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 FUT5 2527 hgsc.bcm.edu 36 19 5818385 5818385 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 C3 718 hgsc.bcm.edu 36 19 6670358 6670358 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CLEC4G 339390 hgsc.bcm.edu 36 19 7702646 7702646 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ECSIT 51295 hgsc.bcm.edu 36 19 11479519 11479519 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ZNF98 148198 hgsc.bcm.edu 36 19 22366378 22366378 + Missense_Mutation SNP T T G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ZNF536 9745 hgsc.bcm.edu 36 19 35628279 35628279 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ZNF577 84765 hgsc.bcm.edu 36 19 57068423 57068423 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 LZTS1 11178 hgsc.bcm.edu 36 8 20152039 20152039 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 KIAA1967 57805 hgsc.bcm.edu 36 8 22531807 22531807 + Missense_Mutation SNP C C A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ENTPD4 9583 hgsc.bcm.edu 36 8 23353373 23353373 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 FUT10 84750 hgsc.bcm.edu 36 8 33366291 33366291 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 YTHDF3 253943 hgsc.bcm.edu 36 8 64261451 64261451 + Silent SNP G G C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ZFHX4 79776 hgsc.bcm.edu 36 8 77779345 77779345 + Missense_Mutation SNP C C A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CDH17 1015 hgsc.bcm.edu 36 8 95241474 95241474 + Silent SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SLC30A8 169026 hgsc.bcm.edu 36 8 118253980 118253980 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 LYPD2 137797 hgsc.bcm.edu 36 8 143829570 143829570 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 AADACL3 126767 hgsc.bcm.edu 36 1 12702164 12702164 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 PQLC2 54896 hgsc.bcm.edu 36 1 19523729 19523729 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 C1QB 713 hgsc.bcm.edu 36 1 22860136 22860136 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 LUZP1 7798 hgsc.bcm.edu 36 1 23293153 23293153 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 GRIK3 2899 hgsc.bcm.edu 36 1 37044311 37044311 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 RIMS3 9783 hgsc.bcm.edu 36 1 40874274 40874274 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 PTPRF 5792 hgsc.bcm.edu 36 1 43858402 43858402 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 RPE65 6121 hgsc.bcm.edu 36 1 68677285 68677285 + Missense_Mutation SNP A A C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 LRRC7 57554 hgsc.bcm.edu 36 1 70276436 70276436 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DPYD 1806 hgsc.bcm.edu 36 1 97317175 97317175 + Missense_Mutation SNP G G T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 HIPK1 204851 hgsc.bcm.edu 36 1 114284645 114284645 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ATP1A1 480 hgsc.bcm.edu 36 1 116734487 116734487 + Silent SNP C C A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 NOTCH2NL 388677 hgsc.bcm.edu 36 1 143984618 143984618 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ANKRD35 148741 hgsc.bcm.edu 36 1 144273914 144273914 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 HIST2H2BE 8349 hgsc.bcm.edu 36 1 148124585 148124585 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 HORMAD1 84072 hgsc.bcm.edu 36 1 148945692 148945692 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 FLG 2312 hgsc.bcm.edu 36 1 150549056 150549056 + Missense_Mutation SNP C C G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 FLG 2312 hgsc.bcm.edu 36 1 150552420 150552420 + Silent SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 NTRK1 4914 hgsc.bcm.edu 36 1 155110074 155110074 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DDR2 4921 hgsc.bcm.edu 36 1 160989575 160989575 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TIPRL 261726 hgsc.bcm.edu 36 1 166432503 166432503 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SEC16B 89866 hgsc.bcm.edu 36 1 176183694 176183694 + Nonsense_Mutation SNP C C A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CACNA1E 777 hgsc.bcm.edu 36 1 179952895 179952895 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SYT14 255928 hgsc.bcm.edu 36 1 208261190 208261190 + Missense_Mutation SNP A A T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 KCTD3 51133 hgsc.bcm.edu 36 1 213851829 213851829 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 USH2A 7399 hgsc.bcm.edu 36 1 213874579 213874579 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ZP4 57829 hgsc.bcm.edu 36 1 236118302 236118302 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 WDR64 128025 hgsc.bcm.edu 36 1 239999412 239999412 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 OR2W3 343171 hgsc.bcm.edu 36 1 246125613 246125613 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 NAV2 89797 hgsc.bcm.edu 36 11 19911633 19911633 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 HIPK3 10114 hgsc.bcm.edu 36 11 33331533 33331533 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 OR4S1 256148 hgsc.bcm.edu 36 11 48285216 48285216 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 P2RY6 5031 hgsc.bcm.edu 36 11 72686022 72686022 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ARHGEF17 9828 hgsc.bcm.edu 36 11 72700227 72700227 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 INTS4 92105 hgsc.bcm.edu 36 11 77317144 77317144 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ATM 472 hgsc.bcm.edu 36 11 107705056 107705056 + Silent SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 GRAMD1B 57476 hgsc.bcm.edu 36 11 122994686 122994686 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 GPX6 257202 hgsc.bcm.edu 36 6 28586537 28586537 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 C6orf27 80737 hgsc.bcm.edu 36 6 31844828 31844828 + Silent SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 GPR115 221393 hgsc.bcm.edu 36 6 47790131 47790131 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TFAP2B 7021 hgsc.bcm.edu 36 6 50918952 50918952 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DST 667 hgsc.bcm.edu 36 6 56591933 56591933 + Missense_Mutation SNP C C A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 FOXO3 2309 hgsc.bcm.edu 36 6 109092033 109092033 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ZBTB24 9841 hgsc.bcm.edu 36 6 109893955 109893955 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SYNE1 23345 hgsc.bcm.edu 36 6 152512343 152512343 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 OPRM1 4988 hgsc.bcm.edu 36 6 154402293 154402293 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 LPA 4018 hgsc.bcm.edu 36 6 160872872 160872872 + Missense_Mutation SNP T T A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 KIAA0664 23277 hgsc.bcm.edu 36 17 2546280 2546280 + Nonsense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 OR1A1 8383 hgsc.bcm.edu 36 17 3066494 3066494 + Missense_Mutation SNP C C T rs61737301 unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TP53 7157 hgsc.bcm.edu 36 17 7517842 7517842 + Missense_Mutation SNP A A T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TP53 7157 hgsc.bcm.edu 36 17 7518286 7518286 + Silent SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TP53 7157 hgsc.bcm.edu 36 17 7518296 7518296 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TP53 7157 hgsc.bcm.edu 36 17 7518986 7518986 + Silent SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TP53 7157 hgsc.bcm.edu 36 17 7520193 7520193 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 MYH4 4622 hgsc.bcm.edu 36 17 10298819 10298819 + Silent SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TNFRSF13B 23495 hgsc.bcm.edu 36 17 16784404 16784404 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SPOP 8405 hgsc.bcm.edu 36 17 45039703 45039703 + Nonsense_Mutation SNP C C A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 RNF43 54894 hgsc.bcm.edu 36 17 53790860 53790860 + Nonsense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 C17orf47 284083 hgsc.bcm.edu 36 17 53975298 53975298 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CSHL1 1444 hgsc.bcm.edu 36 17 59340989 59340989 + Silent SNP G G A rs61762519 unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SDK2 54549 hgsc.bcm.edu 36 17 68865886 68865886 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 UNK 85451 hgsc.bcm.edu 36 17 71324567 71324567 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CYYR1 116159 hgsc.bcm.edu 36 21 26867105 26867105 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 KRTAP6-2 337967 hgsc.bcm.edu 36 21 30893034 30893034 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DNAJC28 54943 hgsc.bcm.edu 36 21 33782759 33782759 + Missense_Mutation SNP C C A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 C21orf29 54084 hgsc.bcm.edu 36 21 44772877 44772877 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CACNA1H 8912 hgsc.bcm.edu 36 16 1200938 1200938 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 AMDHD2 51005 hgsc.bcm.edu 36 16 2518299 2518299 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CREBBP 1387 hgsc.bcm.edu 36 16 3748957 3748957 + Silent SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DCUN1D3 123879 hgsc.bcm.edu 36 16 20779011 20779011 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CNGB1 1258 hgsc.bcm.edu 36 16 56489307 56489307 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 FUK 197258 hgsc.bcm.edu 36 16 69062403 69062403 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ZNF469 84627 hgsc.bcm.edu 36 16 87030581 87030581 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DYM 54808 hgsc.bcm.edu 36 18 45066912 45066912 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 KIAA1468 57614 hgsc.bcm.edu 36 18 58045615 58045615 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ATP2B2 493 hgsc.bcm.edu 36 3 10345709 10345709 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SLC6A11 6538 hgsc.bcm.edu 36 3 10891711 10891711 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SLC6A1 6529 hgsc.bcm.edu 36 3 11034655 11034655 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ATG7 10533 hgsc.bcm.edu 36 3 11364458 11364458 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 BSN 8927 hgsc.bcm.edu 36 3 49655338 49655338 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 OR5K2 402135 hgsc.bcm.edu 36 3 99699650 99699650 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 C3orf17 25871 hgsc.bcm.edu 36 3 114221178 114221178 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 PIK3CA 5290 hgsc.bcm.edu 36 3 180410786 180410786 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 PIK3CA 5290 hgsc.bcm.edu 36 3 180434700 180434700 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 VPS8 23355 hgsc.bcm.edu 36 3 186224834 186224834 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CD163L1 283316 hgsc.bcm.edu 36 12 7440020 7440020 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CD163L1 283316 hgsc.bcm.edu 36 12 7485089 7485089 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 OLR1 4973 hgsc.bcm.edu 36 12 10210805 10210805 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 BCL2L14 79370 hgsc.bcm.edu 36 12 12131559 12131559 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 MLL2 9757 hgsc.bcm.edu 36 12 47702689 47702689 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 MLL2 9757 hgsc.bcm.edu 36 12 47711700 47711700 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ITGB7 3695 hgsc.bcm.edu 36 12 51876732 51876732 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 PTPRQ 374462 hgsc.bcm.edu 36 12 79414338 79414338 + Missense_Mutation SNP C C G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 MAPKAPK5 8550 hgsc.bcm.edu 36 12 110805850 110805850 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TRPM7 54822 hgsc.bcm.edu 36 15 48728232 48728232 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 MYO5A 4644 hgsc.bcm.edu 36 15 50439470 50439470 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ADAMTSL3 57188 hgsc.bcm.edu 36 15 82349994 82349994 + Missense_Mutation SNP G G T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ALPK3 57538 hgsc.bcm.edu 36 15 83185120 83185120 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 KLF8 11279 hgsc.bcm.edu 36 X 56327636 56327636 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CNGA2 1260 hgsc.bcm.edu 36 X 150657618 150657618 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SORCS2 57537 hgsc.bcm.edu 36 4 7782277 7782277 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SLIT2 9353 hgsc.bcm.edu 36 4 19867426 19867426 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 FRAS1 80144 hgsc.bcm.edu 36 4 79426656 79426656 + Silent SNP G G T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 HERC5 51191 hgsc.bcm.edu 36 4 89626397 89626397 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ARHGAP10 79658 hgsc.bcm.edu 36 4 149019843 149019843 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DCHS2 54798 hgsc.bcm.edu 36 4 155463062 155463062 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TDO2 6999 hgsc.bcm.edu 36 4 157049491 157049491 + Silent SNP C C G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 FAM198B 0 hgsc.bcm.edu 36 4 159310880 159310880 + Missense_Mutation SNP A A C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ZFP42 132625 hgsc.bcm.edu 36 4 189161675 189161675 + Silent SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DDX1 1653 hgsc.bcm.edu 36 2 15660169 15660169 + Silent SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 BIRC6 57448 hgsc.bcm.edu 36 2 32673612 32673612 + Silent SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 FSHR 2492 hgsc.bcm.edu 36 2 49044418 49044418 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 PUS10 150962 hgsc.bcm.edu 36 2 61089583 61089583 + Silent SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 LRP1B 53353 hgsc.bcm.edu 36 2 141536245 141536245 + Nonsense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CACNB4 785 hgsc.bcm.edu 36 2 152435331 152435331 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TTN 7273 hgsc.bcm.edu 36 2 179198363 179198363 + Silent SNP G G T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TTN 7273 hgsc.bcm.edu 36 2 179206827 179206827 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TTN 7273 hgsc.bcm.edu 36 2 179357168 179357168 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ZNF804A 91752 hgsc.bcm.edu 36 2 185509339 185509339 + Missense_Mutation SNP A A T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 TFPI 7035 hgsc.bcm.edu 36 2 188069998 188069998 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ERBB4 2066 hgsc.bcm.edu 36 2 211997188 211997188 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DOCK10 55619 hgsc.bcm.edu 36 2 225347988 225347988 + Missense_Mutation SNP C C A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 COL6A3 1293 hgsc.bcm.edu 36 2 237925906 237925906 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DOCK8 81704 hgsc.bcm.edu 36 9 366991 366991 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 GLIS3 169792 hgsc.bcm.edu 36 9 3922428 3922428 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DMRTA1 63951 hgsc.bcm.edu 36 9 22441231 22441231 + Missense_Mutation SNP C C A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 AQP3 360 hgsc.bcm.edu 36 9 33432938 33432938 + Missense_Mutation SNP A A C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 AGTPBP1 23287 hgsc.bcm.edu 36 9 87437733 87437733 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 PTCH1 5727 hgsc.bcm.edu 36 9 97308518 97308518 + Nonsense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 LPPR1 0 hgsc.bcm.edu 36 9 103111484 103111484 + Missense_Mutation SNP C C A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 PAPPA 5069 hgsc.bcm.edu 36 9 118154919 118154919 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 OBP2B 29989 hgsc.bcm.edu 36 9 135072528 135072528 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 FLT3 2322 hgsc.bcm.edu 36 13 27524795 27524795 + Silent SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 RB1 5925 hgsc.bcm.edu 36 13 47817321 47817321 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 PCDH20 64881 hgsc.bcm.edu 36 13 60884666 60884666 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SLITRK1 114798 hgsc.bcm.edu 36 13 83352920 83352920 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 C13orf40 0 hgsc.bcm.edu 36 13 102191711 102191711 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 UCMA 221044 hgsc.bcm.edu 36 10 13315582 13315582 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DUSP13 51207 hgsc.bcm.edu 36 10 76531708 76531708 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 LDB3 11155 hgsc.bcm.edu 36 10 88466177 88466177 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 PTEN 5728 hgsc.bcm.edu 36 10 89710782 89710782 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SORCS1 114815 hgsc.bcm.edu 36 10 108379028 108379028 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DMBT1 1755 hgsc.bcm.edu 36 10 124335746 124335746 + Missense_Mutation SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 LRRC14B 0 hgsc.bcm.edu 36 5 248179 248179 + Missense_Mutation SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CHD1 1105 hgsc.bcm.edu 36 5 98220078 98220078 + Missense_Mutation SNP T T C novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 APC 324 hgsc.bcm.edu 36 5 112156092 112156092 + Silent SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 APC 324 hgsc.bcm.edu 36 5 112203020 112203020 + Nonsense_Mutation SNP T T A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 APC 324 hgsc.bcm.edu 36 5 112203841 112203841 + Missense_Mutation SNP A A G novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 FBN2 2201 hgsc.bcm.edu 36 5 127755624 127755624 + Missense_Mutation SNP T T A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 PCDHA1 56147 hgsc.bcm.edu 36 5 140147943 140147943 + Silent SNP G G A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 FAM71B 153745 hgsc.bcm.edu 36 5 156522350 156522350 + Missense_Mutation SNP G G T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 FAF2 23197 hgsc.bcm.edu 36 5 175846057 175846057 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 GRM6 2916 hgsc.bcm.edu 36 5 178348579 178348579 + Silent SNP C C T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 DOPEY2 9980 hgsc.bcm.edu 36 21 36587487 36587487 + Splice_Site SNP G G T novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CACNA1B 774 hgsc.bcm.edu 36 9 139893434 139893434 + Splice_Site SNP T T A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SLC35F5 80255 hgsc.bcm.edu 36 2 114216747 114216747 + Frame_Shift_Del DEL A A - novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 GABRB2 2561 hgsc.bcm.edu 36 5 160696222 160696223 + Frame_Shift_Ins INS - - A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 C7orf27 221927 hgsc.bcm.edu 36 7 2544524 2544526 + In_Frame_Del DEL AGA AGA - novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 AGA AGA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ZRANB1 54764 hgsc.bcm.edu 36 10 126663550 126663551 + Frame_Shift_Ins INS - - A novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 OR8J1 219477 hgsc.bcm.edu 36 11 55885249 55885250 + Frame_Shift_Ins INS - - T rs34649252 unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 CELA1 1990 hgsc.bcm.edu 36 12 50009865 50009866 + Frame_Shift_Ins INS - - G rs17860363 byCluster;byFrequency TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 ATXN3 4287 hgsc.bcm.edu 36 14 91607107 91607109 + In_Frame_Del DEL CCT CCT - novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 CCT CCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 B4GALT6 9331 hgsc.bcm.edu 36 18 27518321 27518323 + In_Frame_Del DEL AGA AGA - novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 AGA AGA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2 SERPINB10 5273 hgsc.bcm.edu 36 18 59736211 59736212 + Frame_Shift_Del DEL CT CT - novel unknown TCGA-A6-6649-01A-11D-1771-10 TCGA-A6-6649-10A-01D-1771-10 CT CT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 9a937b82-c81d-4f20-87b7-1f3781128a63 54efdba5-2606-437d-89c9-2c11ba409bd2