Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID TranscriptID Exon ChromChange AAChange COSMIC_Codon COSMIC_Gene Drug_Target ABCC2 1244 hgsc.bcm.edu 36 10 101584166 101584166 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_000392 exon24 c.C3298T p.R1100C . . . CUBN 8029 hgsc.bcm.edu 36 10 16986013 16986013 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001081 exon51 c.C8020T p.R2674C . . . NEUROG3 50674 hgsc.bcm.edu 36 10 71002522 71002522 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_020999 exon2 c.G284A p.R95Q . . . ABCG4 64137 hgsc.bcm.edu 36 11 118532279 118532279 + Silent SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001142505 exon7 c.G717A p.V239V . . . WT1 7490 hgsc.bcm.edu 36 11 32378095 32378095 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001198551 exon6 c.C437T p.T146M . . . PPP2R5B 5526 hgsc.bcm.edu 36 11 64452459 64452459 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_006244 exon6 c.C708A p.N236K . . . IFT81 28981 hgsc.bcm.edu 36 12 109057582 109057582 + Missense_Mutation SNP G G C novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G C G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001143779 exon7 c.G653C p.R218T . . . FGF6 2251 hgsc.bcm.edu 36 12 4423596 4423596 + Silent SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_020996 exon2 c.C414T p.F138F . . . NEUROD4 58158 hgsc.bcm.edu 36 12 53706805 53706805 + Silent SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_021191 exon2 c.C315T p.D105D . . . MON2 23041 hgsc.bcm.edu 36 12 61204663 61204663 + Missense_Mutation SNP C C G novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C G C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_015026 exon9 c.C1086G p.F362L . . . NALCN 259232 hgsc.bcm.edu 36 13 100688182 100688182 + Silent SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_052867 exon12 c.C1359T p.F453F . . . FGF9 2254 hgsc.bcm.edu 36 13 21173487 21173487 + Silent SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_002010 exon3 c.G540A p.R180R . . . SGCG 6445 hgsc.bcm.edu 36 13 22792856 22792856 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_000231 exon7 c.C659T p.A220V . . . PARP4 143 hgsc.bcm.edu 36 13 23928615 23928615 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_006437 exon21 c.G2426A p.R809H . . . SLC46A3 283537 hgsc.bcm.edu 36 13 28185633 28185633 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 T T T C T T Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_181785 exon3 c.A244G p.I82V . . . DCLK1 9201 hgsc.bcm.edu 36 13 35326681 35326681 + Silent SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001195430 exon2 c.G69A p.S23S . . . DGKH 160851 hgsc.bcm.edu 36 13 41631458 41631458 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 T T T G T T Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_178009 exon6 c.T679G p.W227G . . . IL25 64806 hgsc.bcm.edu 36 14 22914740 22914740 + Silent SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_022789 exon2 c.C345T p.C115C . . . ESRRB 2103 hgsc.bcm.edu 36 14 75998692 75998692 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_004452 exon5 c.G449A p.R150Q . . . DOC2A 8448 hgsc.bcm.edu 36 16 29925248 29925248 + Silent SNP G G T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_003586 exon10 c.C1044A p.S348S . . . IKZF3 22806 hgsc.bcm.edu 36 17 35175912 35175912 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_183230 exon7 c.G1070A p.R357H . . . KRT13 3860 hgsc.bcm.edu 36 17 36915184 36915184 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_153490 exon1 c.G145A p.V49M . . . PPM1E 22843 hgsc.bcm.edu 36 17 54387903 54387903 + Silent SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_014906 exon2 c.G576A p.G192G . . . ACADVL 37 hgsc.bcm.edu 36 17 7066036 7066036 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001033859 exon7 c.G598A p.G200R . . . ZNF266 10781 hgsc.bcm.edu 36 19 9386259 9386259 + Missense_Mutation SNP G G T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G T G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_006631 exon11 c.C342A p.D114E . . . FCRLA 84824 hgsc.bcm.edu 36 1 159948459 159948459 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001184870 exon3 c.G260A p.R87H . . . DISC1 27185 hgsc.bcm.edu 36 1 230020814 230020814 + Nonsense_Mutation SNP A A T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 A A A T A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001164539 exon9 c.A1909T p.K637X . . . OR2B11 127623 hgsc.bcm.edu 36 1 245681195 245681195 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001004492 exon1 c.G713A p.R238Q . . . FOXS1 2307 hgsc.bcm.edu 36 20 29896308 29896308 + Silent SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_004118 exon1 c.C699T p.A233A . . . C20orf185 359710 hgsc.bcm.edu 36 20 31108116 31108116 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_182658 exon2 c.G232A p.G78S . . . SLC12A5 57468 hgsc.bcm.edu 36 20 44115733 44115733 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C A C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_020708 exon20 c.C2657A p.A886E . . . RBL1 5933 hgsc.bcm.edu 36 20 35097256 35097262 + Frame_Shift_Del DEL CTCTTAG CTCTTAG - novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 CTCTTAG CTCTTAG CTCTTAG - CTCTTAG CTCTTAG Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_002895 exon15 c.1967_1973del p.656_658del . . . ZNF334 55713 hgsc.bcm.edu 36 20 44564004 44564005 + Frame_Shift_Del DEL AA AA - novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 AA AA AA - AA AA Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_018102 exon5 c.1380_1381del p.460_461del . . . CRYBA4 1413 hgsc.bcm.edu 36 22 25349224 25349224 + Silent SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001886 exon3 c.C66T p.F22F . . . TTN 7273 hgsc.bcm.edu 36 2 179348593 179348593 + Missense_Mutation SNP G G T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G T G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_133379 exon28 c.C6243A p.F2081L . . . IKZF2 22807 hgsc.bcm.edu 36 2 213629941 213629941 + Silent SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_016260 exon4 c.G267A p.E89E . . . C2orf18 54978 hgsc.bcm.edu 36 2 26851860 26851860 + Missense_Mutation SNP G G C novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G C G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_017877 exon4 c.G347C p.S116T . . . PLCXD2 257068 hgsc.bcm.edu 36 3 112909542 112909542 + Silent SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_153268 exon2 c.C243T p.L81L . . . RABL3 285282 hgsc.bcm.edu 36 3 121911382 121911382 + Missense_Mutation SNP C C G novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C G C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_173825 exon3 c.G203C p.G68A . . . PTX3 5806 hgsc.bcm.edu 36 3 158642879 158642879 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_002852 exon3 c.G563A p.R188H . . . SHOX2 6474 hgsc.bcm.edu 36 3 159300374 159300374 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 T T T C T T Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_006884 exon4 c.A671G p.N224S . . . BCHE 590 hgsc.bcm.edu 36 3 167030552 167030552 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_000055 exon2 c.G964A p.V322M . . . ZNF662 389114 hgsc.bcm.edu 36 3 42925356 42925356 + Silent SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001134656 exon3 c.G282A p.S94S . . . EPHA3 2042 hgsc.bcm.edu 36 3 89551081 89551081 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 T T T G T T Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_005233 exon11 c.T1925G p.L642R . . . ADAM29 11086 hgsc.bcm.edu 36 4 176133864 176133864 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001130705 exon3 c.G613A p.V205I ADAM29,large_intestine,colon,Substitution - Missense,0 . . CCT5 22948 hgsc.bcm.edu 36 5 10315693 10315693 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_012073 exon9 c.T1280C p.I427T . . . APC 324 hgsc.bcm.edu 36 5 112202122 112202122 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001127511 exon14 c.C2878T p.Q960X . . . APC 324 hgsc.bcm.edu 36 5 112203227 112203227 + Nonsense_Mutation SNP C C A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C A C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001127511 exon14 c.C3983A p.S1328X APC,large_intestine,colon,Substitution - Nonsense,0 . . SLC12A2 6558 hgsc.bcm.edu 36 5 127512435 127512435 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 A A A G A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001046 exon12 c.A1972G p.T658A . . . FBN2 2201 hgsc.bcm.edu 36 5 127708094 127708094 + Silent SNP A A G novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 A A A G A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001999 exon25 c.T3225C p.N1075N . . . MYOT 9499 hgsc.bcm.edu 36 5 137247050 137247050 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 A A A G A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_006790 exon7 c.A895G p.I299V . . . DNAH5 1767 hgsc.bcm.edu 36 5 13976452 13976452 + Silent SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001369 exon4 c.G375A p.G125G . . . SLC45A2 51151 hgsc.bcm.edu 36 5 33983198 33983198 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001012509 exon6 c.G1195T p.G399C . . . FBXO4 26272 hgsc.bcm.edu 36 5 41977128 41977128 + Silent SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_012176 exon7 c.G1152A p.K384K . . . MSH3 4437 hgsc.bcm.edu 36 5 80099643 80099643 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_002439 exon14 c.C2032T p.L678F . . . VARS2 57176 hgsc.bcm.edu 36 6 30994661 30994661 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001167733 exon10 c.C644T p.S215L . . . PLXNA4 91584 hgsc.bcm.edu 36 7 131842982 131842982 + Silent SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_181775 exon3 c.C1011T p.T337T . . . TMEM195 392636 hgsc.bcm.edu 36 7 15207462 15207462 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 T T T G T T Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001004320 exon13 c.A1311C p.K437N . . . NUDT1 4521 hgsc.bcm.edu 36 7 2257093 2257093 + Silent SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_198949 exon5 c.C471T p.H157H . . . AIMP2 7965 hgsc.bcm.edu 36 7 6024098 6024098 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_006303 exon3 c.C470T p.S157L . . . PREX2 80243 hgsc.bcm.edu 36 8 69299370 69299370 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_024870 exon39 c.C4730T p.A1577V . . . COL5A1 1289 hgsc.bcm.edu 36 9 136856461 136856461 + Silent SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_000093 exon62 c.G4893A p.T1631T . . . TAF1L 138474 hgsc.bcm.edu 36 9 32621851 32621851 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_153809 exon1 c.C3727T p.R1243W . . . BICD2 23299 hgsc.bcm.edu 36 9 94531260 94531260 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G A G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_015250 exon2 c.C320T p.S107L . . . SH3KBP1 30011 hgsc.bcm.edu 36 X 19623666 19623666 + Missense_Mutation SNP G G T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 G G G T G G Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_001024666 exon4 c.C394A p.Q132K . . . PFKFB1 5207 hgsc.bcm.edu 36 X 55001518 55001518 + Silent SNP C C T novel unknown TCGA-AA-3544-01A-01W-0831-10 TCGA-AA-3544-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 4d005fc1-b1f3-48fd-960f-321988d4e3f2 2c5f9ebc-3740-4a3d-bde8-fbd654b13c3c NM_002625 exon6 c.G462A p.V154V . . .