Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID TranscriptID Exon ChromChange AAChange COSMIC_Codon COSMIC_Gene Drug_Target SEMA4G 57715 hgsc.bcm.edu 36 10 102728133 102728133 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_017893 exon5 c.T527G p.I176S . . . SUFU 51684 hgsc.bcm.edu 36 10 104367111 104367111 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_016169 exon10 c.C1232T p.T411M . . . GSTO1 9446 hgsc.bcm.edu 36 10 106017026 106017026 + Missense_Mutation SNP A A C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_004832 exon6 c.A599C p.K200T . . . ACSL5 51703 hgsc.bcm.edu 36 10 114144757 114144757 + Silent SNP G G C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_203379 exon2 c.G63C p.L21L . . . CUBN 8029 hgsc.bcm.edu 36 10 16972423 16972423 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001081 exon55 c.A8708C p.Q2903P . . . CREM 1390 hgsc.bcm.edu 36 10 35540198 35540198 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_182721 exon3 c.C205T p.R69W . . . PIH1D2 120379 hgsc.bcm.edu 36 11 111447062 111447062 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001082619 exon4 c.T457C p.F153L . . . HSD17B12 51144 hgsc.bcm.edu 36 11 43659082 43659082 + Silent SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_016142 exon1 c.G129A p.A43A . . . OR9G4 283189 hgsc.bcm.edu 36 11 56267713 56267713 + Silent SNP A A G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001005284 exon1 c.T151C p.L51L . . . APLNR 187 hgsc.bcm.edu 36 11 56760920 56760920 + Silent SNP G G T rs948847 by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_005161 exon1 c.C135A p.G45G . . . RELT 84957 hgsc.bcm.edu 36 11 72782993 72782993 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_152222 exon8 c.C771A p.S257R . . . KCNA1 3736 hgsc.bcm.edu 36 12 4891409 4891409 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_000217 exon2 c.G604A p.V202I . . . PDE1B 5153 hgsc.bcm.edu 36 12 53253422 53253422 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001165975 exon8 c.G793A p.V265M . . . RAB5B 5869 hgsc.bcm.edu 36 12 54670736 54670736 + Missense_Mutation SNP A A T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_002868 exon4 c.A319T p.T107S . . . ATP5B 506 hgsc.bcm.edu 36 12 55319270 55319270 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001686 exon9 c.A1376C p.K459T . . . GNB3 2784 hgsc.bcm.edu 36 12 6822422 6822422 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_002075 exon5 c.C124T p.R42X . . . PCTK2 5128 hgsc.bcm.edu 36 12 95252741 95252741 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_002595 exon2 c.A5G p.K2R . . . KRAS 3845 hgsc.bcm.edu 36 12 25289551 25289551 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C C A C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_004985 exon2 c.G35T p.G12V KRAS,haematopoietic_and_lymphoid_tissue,NS,Substitution - Missense,0 . . NALCN 259232 hgsc.bcm.edu 36 13 100708859 100708859 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_052867 exon11 c.C1202T p.A401V . . . GPC5 2262 hgsc.bcm.edu 36 13 91595186 91595186 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_004466 exon7 c.G1504A p.D502N . . . HS6ST3 266722 hgsc.bcm.edu 36 13 96282801 96282801 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_153456 exon2 c.G764A p.W255X . . . ARID4A 5926 hgsc.bcm.edu 36 14 57901991 57901991 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_023001 exon21 c.C3214T p.Q1072X . . . ACYP1 97 hgsc.bcm.edu 36 14 74600000 74600000 + Nonsense_Mutation SNP C C A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_203488 exon2 c.G10T p.G4X . . . SETD3 84193 hgsc.bcm.edu 36 14 98941432 98941432 + Silent SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_032233 exon10 c.C954T p.N318N . . . NRXN3 9369 hgsc.bcm.edu 36 14 78339714 78339714 + Splice_Site SNP A A G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c . . . . . . . ATP10A 57194 hgsc.bcm.edu 36 15 23477297 23477297 + Silent SNP C C G rs2076741 by2Hit2Allele;byCluster;byFrequency;byHapMap TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_024490 exon18 c.G3510C p.T1170T . . . BMF 90427 hgsc.bcm.edu 36 15 38185511 38185511 + Silent SNP C C A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001003940 exon3 c.G69T p.V23V . . . IGDCC4 57722 hgsc.bcm.edu 36 15 63474533 63474533 + Nonsense_Mutation SNP C C A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_020962 exon8 c.G1528T p.G510X . . . IREB2 3658 hgsc.bcm.edu 36 15 76519271 76519271 + Silent SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_004136 exon2 c.C99T p.T33T . . . ALDH1A3 220 hgsc.bcm.edu 36 15 99258311 99258311 + Missense_Mutation SNP G G T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_000693 exon9 c.G892T p.A298S . . . DNAH3 55567 hgsc.bcm.edu 36 16 21064810 21064810 + Missense_Mutation SNP T T A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_017539 exon2 c.A218T p.Y73F . . . USP31 57478 hgsc.bcm.edu 36 16 22987608 22987608 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_020718 exon16 c.G3319A p.V1107M . . . ZNF500 26048 hgsc.bcm.edu 36 16 4752666 4752666 + Silent SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_021646 exon3 c.C507T p.S169S . . . RBL2 5934 hgsc.bcm.edu 36 16 52081630 52081630 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_005611 exon22 c.C3337T p.P1113S . . . IRX6 79190 hgsc.bcm.edu 36 16 53919193 53919193 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_024335 exon4 c.G608A p.R203H . . . GNAO1 2775 hgsc.bcm.edu 36 16 54867373 54867373 + Missense_Mutation SNP A A C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_020988 exon3 c.A191C p.E64A . . . NRN1L 123904 hgsc.bcm.edu 36 16 66477484 66477484 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_198443 exon3 c.C319T p.R107C . . . PIGS 94005 hgsc.bcm.edu 36 17 23907988 23907988 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_033198 exon9 c.G1064A p.R355H . . . ACACA 31 hgsc.bcm.edu 36 17 32623209 32623209 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_198839 exon41 c.A4240C p.T1414P . . . KRT28 162605 hgsc.bcm.edu 36 17 36208120 36208120 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_181535 exon3 c.G583A p.G195R . . . SLC35B1 10237 hgsc.bcm.edu 36 17 45140135 45140135 + Silent SNP A A G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_005827 exon1 c.T60C p.G20G . . . SPAG9 9043 hgsc.bcm.edu 36 17 46426277 46426277 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_003971 exon18 c.A2203G p.K735E . . . TNFSF12 8742 hgsc.bcm.edu 36 17 7401241 7401241 + Silent SNP G G C rs3803798 byCluster;byFrequency TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_003809 exon7 c.G600C p.A200A . . . ODF4 146852 hgsc.bcm.edu 36 17 8184114 8184114 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_153007 exon1 c.G20A p.G7E . . . TP53 7157 hgsc.bcm.edu 36 17 7519131 7519131 + Missense_Mutation SNP C C T rs28934578 unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C C T C C Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001126114 exon5 c.G524A p.R175H TP53,lung,NS,Substitution - Missense,0 . . EMILIN2 84034 hgsc.bcm.edu 36 18 2881917 2881917 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_032048 exon4 c.G1792A p.E598K . . . SMAD4 4089 hgsc.bcm.edu 36 18 46845917 46845917 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_005359 exon9 c.G1082A p.R361H SMAD4,small_intestine,duodenum,Substitution - Missense,+1 . . SMARCA4 6597 hgsc.bcm.edu 36 19 10961090 10961090 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001128845 exon6 c.G1216A p.A406T . . . ZNF507 22847 hgsc.bcm.edu 36 19 37537536 37537536 + Missense_Mutation SNP G G T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_014910 exon2 c.G1960T p.G654C . . . PDCD2L 84306 hgsc.bcm.edu 36 19 39592228 39592228 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_032346 exon4 c.T659C p.I220T . . . ACTN4 81 hgsc.bcm.edu 36 19 43890646 43890646 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_004924 exon6 c.G622A p.E208K . . . SIRT2 22933 hgsc.bcm.edu 36 19 44076326 44076326 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_012237 exon3 c.G85A p.G29R . . . SUPT5H 6829 hgsc.bcm.edu 36 19 44655532 44655532 + Silent SNP C C A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001111020 exon23 c.C2196A p.A732A . . . CCDC8 83987 hgsc.bcm.edu 36 19 51606999 51606999 + Silent SNP T T C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_032040 exon1 c.A909G p.Q303Q . . . SIGLEC9 27180 hgsc.bcm.edu 36 19 56324962 56324962 + Silent SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_014441 exon7 c.G1206A p.G402G . . . ZNF304 57343 hgsc.bcm.edu 36 19 62560438 62560438 + Silent SNP T T G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_020657 exon3 c.T1389G p.V463V . . . KCND3 3752 hgsc.bcm.edu 36 1 112326644 112326644 + Silent SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_172198 exon2 c.C228T p.N76N . . . NRAS 4893 hgsc.bcm.edu 36 1 115060271 115060271 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_002524 exon2 c.G34T p.G12C NRAS,haematopoietic_and_lymphoid_tissue,NS,Substitution - Missense,+1 . . TARS2 80222 hgsc.bcm.edu 36 1 148729763 148729763 + Silent SNP T T G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_025150 exon4 c.T450G p.V150V . . . ARHGEF2 9181 hgsc.bcm.edu 36 1 154201437 154201437 + Silent SNP T T C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001162383 exon7 c.A690G p.K230K . . . IQGAP3 128239 hgsc.bcm.edu 36 1 154770468 154770468 + Missense_Mutation SNP G G T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_178229 exon30 c.C3830A p.P1277H . . . CD1B 910 hgsc.bcm.edu 36 1 156566450 156566450 + Silent SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001764 exon3 c.C423T p.F141F . . . IGSF9 57549 hgsc.bcm.edu 36 1 158163835 158163835 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_020789 exon21 c.G3416A p.R1139H . . . PPOX 5498 hgsc.bcm.edu 36 1 159404516 159404516 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001122764 exon5 c.T446G p.F149C . . . C1orf96 126731 hgsc.bcm.edu 36 1 227529122 227529122 + Missense_Mutation SNP C C G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_145257 exon3 c.G622C p.A208P . . . RPS6KA1 6195 hgsc.bcm.edu 36 1 26770586 26770586 + Silent SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_002953 exon18 c.C1650T p.P550P . . . AJAP1 55966 hgsc.bcm.edu 36 1 4732223 4732223 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001042478 exon4 c.G941A p.R314H . . . LHX8 431707 hgsc.bcm.edu 36 1 75382182 75382182 + Silent SNP A A G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001001933 exon7 c.A675G p.A225A . . . TTLL7 79739 hgsc.bcm.edu 36 1 84167495 84167495 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_024686 exon10 c.C1054T p.R352X . . . SSX2IP 117178 hgsc.bcm.edu 36 1 84902754 84902754 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001166293 exon6 c.C607T p.R203C . . . PLA2G4A 5321 hgsc.bcm.edu 36 1 185191856 185191856 + Splice_Site SNP G G C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c . . . . . . . CHD6 84181 hgsc.bcm.edu 36 20 39518016 39518016 + Silent SNP T T C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_032221 exon19 c.A2847G p.K949K . . . STMN3 50861 hgsc.bcm.edu 36 20 61746074 61746074 + Silent SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_015894 exon2 c.C52T p.L18L . . . HAO1 54363 hgsc.bcm.edu 36 20 7869007 7869007 + Silent SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_017545 exon1 c.G63A p.K21K . . . TASP1 55617 hgsc.bcm.edu 36 20 13462769 13462769 + Nonsense_Mutation SNP A A T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A A T A A Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_017714 exon9 c.T695A p.L232X . . . PRSS7 5651 hgsc.bcm.edu 36 21 18620749 18620749 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_002772 exon16 c.G1792T p.G598W . . . EIF3D 8664 hgsc.bcm.edu 36 22 35237656 35237656 + Silent SNP T T C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_003753 exon14 c.A1473G p.L491L . . . PVALB 5816 hgsc.bcm.edu 36 22 35539655 35539655 + Silent SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_002854 exon4 c.C285T p.D95D . . . PHF5A 84844 hgsc.bcm.edu 36 22 40194078 40194078 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_032758 exon2 c.A72C p.E24D . . . SAP130 79595 hgsc.bcm.edu 36 2 128467269 128467269 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_024545 exon12 c.C1517T p.P506L . . . UPP2 151531 hgsc.bcm.edu 36 2 158688541 158688541 + Silent SNP T T C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_173355 exon6 c.T699C p.F233F . . . TTN 7273 hgsc.bcm.edu 36 2 179339478 179339478 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_133437 exon40 c.G9440A p.R3147Q . . . ALS2CR11 151254 hgsc.bcm.edu 36 2 202120564 202120564 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001168221 exon10 c.A992G p.K331R . . . TMEM169 92691 hgsc.bcm.edu 36 2 216669129 216669129 + Silent SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001142312 exon2 c.C198T p.P66P . . . SMARCAL1 50485 hgsc.bcm.edu 36 2 216993372 216993372 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001127207 exon5 c.C968T p.P323L . . . ADD2 119 hgsc.bcm.edu 36 2 70744276 70744276 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001185054 exon16 c.C1970T p.T657M . . . RABL3 285282 hgsc.bcm.edu 36 3 121907601 121907601 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_173825 exon4 c.C319T p.R107C . . . MRPL3 11222 hgsc.bcm.edu 36 3 132699716 132699716 + Missense_Mutation SNP A A C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_007208 exon4 c.T465G p.F155L . . . TGFBR2 7048 hgsc.bcm.edu 36 3 30707984 30707984 + Silent SNP C C A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001024847 exon8 c.C1668A p.A556A . . . SCN10A 6336 hgsc.bcm.edu 36 3 38738835 38738835 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_006514 exon19 c.G3425A p.R1142H . . . GORASP1 64689 hgsc.bcm.edu 36 3 39117359 39117359 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_031899 exon5 c.T449C p.F150S . . . ATRIP 84126 hgsc.bcm.edu 36 3 48466487 48466487 + Silent SNP A A G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_032166 exon2 c.A288G p.K96K . . . CADM2 253559 hgsc.bcm.edu 36 3 85933948 85933948 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001167674 exon2 c.T123G p.I41M . . . FAT4 79633 hgsc.bcm.edu 36 4 126592832 126592832 + Silent SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_024582 exon9 c.C11211T p.A3737A . . . SETD7 80854 hgsc.bcm.edu 36 4 140658535 140658535 + Nonsense_Mutation SNP C C A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_030648 exon7 c.G874T p.G292X . . . ARFIP1 27236 hgsc.bcm.edu 36 4 154011410 154011410 + Missense_Mutation SNP T T A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001025595 exon4 c.T258A p.S86R . . . HAND2 9464 hgsc.bcm.edu 36 4 174686649 174686649 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_021973 exon1 c.C367T p.R123C . . . SLC34A2 10568 hgsc.bcm.edu 36 4 25287188 25287188 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001177998 exon13 c.C1789T p.R597C . . . UBA6 55236 hgsc.bcm.edu 36 4 68173407 68173407 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_018227 exon29 c.A2612C p.K871T . . . ADAMTS3 9508 hgsc.bcm.edu 36 4 73395680 73395680 + Silent SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_014243 exon14 c.G2004A p.T668T . . . CTNND2 1501 hgsc.bcm.edu 36 5 11076012 11076012 + Silent SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001332 exon17 c.G2868A p.S956S . . . APC 324 hgsc.bcm.edu 36 5 112192485 112192485 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_000038 exon14 c.C1660T p.R554X APC,ovary,NS,Substitution - Nonsense,0 . . APC 324 hgsc.bcm.edu 36 5 112203322 112203322 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_000038 exon16 c.C4132T p.Q1378X APC,large_intestine,NS,Substitution - Nonsense,0 . . TCF7 6932 hgsc.bcm.edu 36 5 133506608 133506608 + Missense_Mutation SNP A A T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_201634 exon7 c.A599T p.Q200L . . . CCDC99 54908 hgsc.bcm.edu 36 5 168948043 168948043 + Silent SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_017785 exon2 c.G45A p.E15E . . . DOCK2 1794 hgsc.bcm.edu 36 5 169061886 169061886 + Silent SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_004946 exon14 c.G1260A p.G420G . . . FBXW11 23291 hgsc.bcm.edu 36 5 171235910 171235910 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_012300 exon8 c.G1142A p.G381D . . . LIFR 3977 hgsc.bcm.edu 36 5 38538573 38538573 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_002310 exon11 c.G1523A p.R508Q . . . MGC42105 167359 hgsc.bcm.edu 36 5 43316157 43316157 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_153361 exon4 c.G880A p.V294M . . . DDX4 54514 hgsc.bcm.edu 36 5 55119451 55119451 + Silent SNP T T A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001166533 exon14 c.T978A p.I326I . . . CD180 4064 hgsc.bcm.edu 36 5 66515744 66515744 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_005582 exon3 c.A683C p.N228T . . . BCLAF1 9774 hgsc.bcm.edu 36 6 136641602 136641603 + Frame_Shift_Ins INS - - TG novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 - - . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_014739 exon4 c.110_111insCA p.R37fs . . . RNF182 221687 hgsc.bcm.edu 36 6 14085999 14085999 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_152737 exon3 c.G670A p.V224I . . . PLEKHG1 57480 hgsc.bcm.edu 36 6 151194436 151194436 + Silent SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001029884 exon16 c.C2496T p.S832S . . . EHMT2 10919 hgsc.bcm.edu 36 6 31959660 31959660 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_006709 exon22 c.G2818A p.G940S . . . SLC22A23 63027 hgsc.bcm.edu 36 6 3269067 3269067 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_021945 exon5 c.C239T p.S80L . . . UBR2 23304 hgsc.bcm.edu 36 6 42692983 42692983 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_015255 exon11 c.A1210G p.M404V . . . CUL9 23113 hgsc.bcm.edu 36 6 43274392 43274392 + Silent SNP G G T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_015089 exon12 c.G2871T p.G957G . . . RRAGD 58528 hgsc.bcm.edu 36 6 90138880 90138880 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_021244 exon6 c.G1046T p.R349I . . . C6orf167 253714 hgsc.bcm.edu 36 6 97716628 97716628 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_198468 exon22 c.A3356G p.K1119R . . . SYNE1 23345 hgsc.bcm.edu 36 6 152807331 152807331 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T T G T T Unknown Valid Somatic Phase_I Capture 454_PCR_WGA SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_033071 exon30 c.A3766C p.I1256L . . . PSMA2 5683 hgsc.bcm.edu 36 7 42928035 42928035 + Silent SNP T T C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_002787 exon6 c.A477G p.K159K . . . SGCZ 137868 hgsc.bcm.edu 36 8 13992405 13992405 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_139167 exon8 c.G857T p.C286F . . . PARP10 84875 hgsc.bcm.edu 36 8 145131242 145131242 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_032789 exon5 c.G916A p.A306T . . . CIZ1 25792 hgsc.bcm.edu 36 9 129978481 129978481 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001131015 exon12 c.T1745C p.V582A . . . LAMC3 10319 hgsc.bcm.edu 36 9 132952995 132952995 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_006059 exon27 c.G4447A p.E1483K . . . GTF3C4 9329 hgsc.bcm.edu 36 9 134544387 134544387 + Silent SNP G G A rs371169 by2Hit2Allele;byCluster;byFrequency;byHapMap TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_012204 exon2 c.G1560A p.E520E . . . C9orf98 158067 hgsc.bcm.edu 36 9 134657901 134657901 + Silent SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_152572 exon11 c.C1062T p.G354G . . . BNC2 54796 hgsc.bcm.edu 36 9 16409123 16409123 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_017637 exon7 c.A3164C p.K1055T . . . ZNF169 169841 hgsc.bcm.edu 36 9 96103032 96103032 + Silent SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_194320 exon5 c.C1371T p.P457P . . . CORO2A 7464 hgsc.bcm.edu 36 9 99926879 99926879 + Missense_Mutation SNP A A T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_003389 exon12 c.T1576A p.X526R . . . GLUD2 2747 hgsc.bcm.edu 36 X 120010801 120010801 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 T T . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_012084 exon1 c.T1582C p.Y528H . . . SLC9A6 10479 hgsc.bcm.edu 36 X 134954535 134954535 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 C C . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001177651 exon17 c.C1936T p.H646Y . . . CNKSR2 22866 hgsc.bcm.edu 36 X 21302957 21302957 + Silent SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001168648 exon1 c.G21A p.P7P . . . WDR42B 139425 hgsc.bcm.edu 36 X 27907883 27907883 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_001017930 exon1 c.C1490T p.A497V . . . SMC1A 8243 hgsc.bcm.edu 36 X 53453114 53453114 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 G G . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_006306 exon8 c.C1300T p.R434W . . . CYLC1 1538 hgsc.bcm.edu 36 X 83015638 83015638 + Silent SNP A A G novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_021118 exon4 c.A1266G p.E422E . . . USP9Y 8287 hgsc.bcm.edu 36 Y 13357370 13357370 + Missense_Mutation SNP A A C novel unknown TCGA-AA-3558-01A-01W-0831-10 TCGA-AA-3558-10A-01W-0831-10 A A . . . . Unknown Unknown Somatic Phase_I Capture . SOLID 7aee1559-68a4-495a-be22-f8cf977f5a73 6d377c9d-55c0-4c45-923b-287e2870019c NM_004654 exon9 c.A818C p.K273T . . .