Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID TNRC18 84629 hgsc.bcm.edu 36 7 5358003 5358003 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac RSPH10B2 728194 hgsc.bcm.edu 36 7 6764040 6764040 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac NXPH1 30010 hgsc.bcm.edu 36 7 8757619 8757619 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SNX13 23161 hgsc.bcm.edu 36 7 17821090 17821090 + Missense_Mutation SNP T T A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CHN2 1124 hgsc.bcm.edu 36 7 29486277 29486277 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CCDC129 223075 hgsc.bcm.edu 36 7 31560650 31560650 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ABCA13 154664 hgsc.bcm.edu 36 7 48499465 48499465 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac WBSCR17 64409 hgsc.bcm.edu 36 7 70438548 70438548 + Silent SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CCL24 6369 hgsc.bcm.edu 36 7 75279196 75279196 + Missense_Mutation SNP G G T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PCLO 27445 hgsc.bcm.edu 36 7 82420972 82420972 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac GALNT11 63917 hgsc.bcm.edu 36 7 151433341 151433341 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SIRPA 140885 hgsc.bcm.edu 36 20 1844059 1844059 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac C20orf12 55184 hgsc.bcm.edu 36 20 18318345 18318345 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SULF2 55959 hgsc.bcm.edu 36 20 45727401 45727401 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ZNF217 7764 hgsc.bcm.edu 36 20 51626142 51626142 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac GNAS 2778 hgsc.bcm.edu 36 20 56917816 56917816 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac GTPBP1 9567 hgsc.bcm.edu 36 22 37452033 37452033 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac OR4Q3 441669 hgsc.bcm.edu 36 14 19285847 19285847 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PARP2 10038 hgsc.bcm.edu 36 14 19893897 19893897 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac GZMB 3002 hgsc.bcm.edu 36 14 24170183 24170183 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac HEATR5A 25938 hgsc.bcm.edu 36 14 30922714 30922714 + Missense_Mutation SNP T T A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac LRFN5 145581 hgsc.bcm.edu 36 14 41430307 41430307 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SOS2 6655 hgsc.bcm.edu 36 14 49736243 49736243 + Missense_Mutation SNP T T A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac NIN 51199 hgsc.bcm.edu 36 14 50309444 50309444 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ERO1L 30001 hgsc.bcm.edu 36 14 52189773 52189773 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MUDENG 55745 hgsc.bcm.edu 36 14 56810994 56810994 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac DICER1 23405 hgsc.bcm.edu 36 14 94642170 94642170 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac DENND1C 79958 hgsc.bcm.edu 36 19 6418794 6418794 + Silent SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ZNF558 148156 hgsc.bcm.edu 36 19 8792951 8792951 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MUC16 94025 hgsc.bcm.edu 36 19 8838652 8838652 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MUC16 94025 hgsc.bcm.edu 36 19 8929378 8929378 + Silent SNP A A T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MUC16 94025 hgsc.bcm.edu 36 19 8938504 8938504 + Silent SNP G G T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ZNF699 374879 hgsc.bcm.edu 36 19 9268216 9268216 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ZNF333 84449 hgsc.bcm.edu 36 19 14688012 14688012 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac OR10H5 284433 hgsc.bcm.edu 36 19 15766011 15766011 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ZNF675 171392 hgsc.bcm.edu 36 19 23628988 23628988 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CD22 933 hgsc.bcm.edu 36 19 40528945 40528945 + Silent SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PLA2G4C 8605 hgsc.bcm.edu 36 19 53294923 53294923 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac LIG1 26018 hgsc.bcm.edu 36 19 53323034 53323034 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac RCN3 57333 hgsc.bcm.edu 36 19 54732117 54732117 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ZNF480 147657 hgsc.bcm.edu 36 19 57517398 57517398 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ZNF880 0 hgsc.bcm.edu 36 19 57579854 57579854 + Silent SNP G G T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SSC5D 0 hgsc.bcm.edu 36 19 60701291 60701291 + Silent SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ZNF211 10520 hgsc.bcm.edu 36 19 62844721 62844721 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac FZD3 8326 hgsc.bcm.edu 36 8 28441141 28441141 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CHD7 55636 hgsc.bcm.edu 36 8 61936150 61936150 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ARFGEF1 10565 hgsc.bcm.edu 36 8 68299778 68299778 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SLC7A13 157724 hgsc.bcm.edu 36 8 87295758 87295758 + Silent SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MMP16 4325 hgsc.bcm.edu 36 8 89200206 89200206 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CSMD3 114788 hgsc.bcm.edu 36 8 113588176 113588176 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CSMD3 114788 hgsc.bcm.edu 36 8 113731677 113731677 + Missense_Mutation SNP T T A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TG 7038 hgsc.bcm.edu 36 8 133980321 133980321 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac COL22A1 169044 hgsc.bcm.edu 36 8 139781545 139781545 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac RNF207 388591 hgsc.bcm.edu 36 1 6201957 6201957 + Missense_Mutation SNP G G C rs846111 by2Hit2Allele;byCluster;byFrequency;byHapMap TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac VPS13D 55187 hgsc.bcm.edu 36 1 12345804 12345804 + Missense_Mutation SNP G G T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SPATA21 374955 hgsc.bcm.edu 36 1 16621016 16621016 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PSMB2 5690 hgsc.bcm.edu 36 1 35843469 35843469 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SLC5A9 200010 hgsc.bcm.edu 36 1 48469862 48469862 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac LRRC7 57554 hgsc.bcm.edu 36 1 70266545 70266545 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ACADM 34 hgsc.bcm.edu 36 1 75973113 75973113 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac FRRS1 391059 hgsc.bcm.edu 36 1 99966750 99966750 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PTGFRN 5738 hgsc.bcm.edu 36 1 117305482 117305482 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MAN1A2 10905 hgsc.bcm.edu 36 1 117847033 117847033 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac LYSMD1 388695 hgsc.bcm.edu 36 1 149400942 149400942 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac FLG 2312 hgsc.bcm.edu 36 1 150552149 150552149 + Missense_Mutation SNP T T A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac AIM2 9447 hgsc.bcm.edu 36 1 157299121 157299121 + Silent SNP G G T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac BRP44 25874 hgsc.bcm.edu 36 1 166160383 166160383 + Silent SNP G G A rs203861 by2Hit2Allele;byCluster;byFrequency;byHapMap TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac BLZF1 8548 hgsc.bcm.edu 36 1 167614235 167614235 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac DARS2 55157 hgsc.bcm.edu 36 1 172066422 172066422 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac RABGAP1L 9910 hgsc.bcm.edu 36 1 172486320 172486320 + Missense_Mutation SNP A A C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac LAMC1 3915 hgsc.bcm.edu 36 1 181351312 181351312 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CTSE 1510 hgsc.bcm.edu 36 1 204485036 204485036 + Silent SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PLXNA2 5362 hgsc.bcm.edu 36 1 206294439 206294439 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac HSD11B1 3290 hgsc.bcm.edu 36 1 207945828 207945828 + Silent SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac USH2A 7399 hgsc.bcm.edu 36 1 214565484 214565484 + Missense_Mutation SNP C C T rs3820464 byHapMap TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SLC30A10 55532 hgsc.bcm.edu 36 1 218158341 218158341 + Silent SNP A A T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TARBP1 6894 hgsc.bcm.edu 36 1 232596142 232596142 + Silent SNP C C T rs1802871 by2Hit2Allele;byCluster;byFrequency;byHapMap TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac NID1 4811 hgsc.bcm.edu 36 1 234254073 234254073 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac FMN2 56776 hgsc.bcm.edu 36 1 238437071 238437071 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac KMO 8564 hgsc.bcm.edu 36 1 239792249 239792249 + Silent SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PLD5 200150 hgsc.bcm.edu 36 1 240319800 240319800 + Silent SNP T T A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ZNF669 79862 hgsc.bcm.edu 36 1 245331040 245331040 + Silent SNP T T A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ZNF669 79862 hgsc.bcm.edu 36 1 245331041 245331041 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MUC6 4588 hgsc.bcm.edu 36 11 1007023 1007023 + Silent SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MUC6 4588 hgsc.bcm.edu 36 11 1007955 1007955 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac OR52A4 390053 hgsc.bcm.edu 36 11 5099008 5099008 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PRDM11 56981 hgsc.bcm.edu 36 11 45202354 45202354 + Missense_Mutation SNP G G T rs35090414 byCluster;byFrequency TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac OR4C6 219432 hgsc.bcm.edu 36 11 55189661 55189661 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MYO7A 4647 hgsc.bcm.edu 36 11 76578127 76578127 + Silent SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac GAB2 9846 hgsc.bcm.edu 36 11 77609131 77609131 + Missense_Mutation SNP G G C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MMP13 4322 hgsc.bcm.edu 36 11 102331432 102331432 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ATM 472 hgsc.bcm.edu 36 11 107691764 107691764 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac FAM55D 54827 hgsc.bcm.edu 36 11 113956109 113956109 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ARHGEF12 23365 hgsc.bcm.edu 36 11 119855916 119855916 + Silent SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac OR10G8 219869 hgsc.bcm.edu 36 11 123405734 123405734 + Silent SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac EI24 9538 hgsc.bcm.edu 36 11 124957509 124957509 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac HIST1H4C 8364 hgsc.bcm.edu 36 6 26212364 26212364 + Silent SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ZSCAN16 80345 hgsc.bcm.edu 36 6 28202562 28202562 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac HLA-A 3105 hgsc.bcm.edu 36 6 30021016 30021016 + Missense_Mutation SNP G G A rs1137631 byCluster TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac NOTCH4 4855 hgsc.bcm.edu 36 6 32288259 32288259 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac DNAH8 1769 hgsc.bcm.edu 36 6 38989690 38989690 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac POLH 10721 hgsc.bcm.edu 36 6 43673553 43673553 + Silent SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CAPN11 11131 hgsc.bcm.edu 36 6 44256376 44256376 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac HCRTR2 131450 hgsc.bcm.edu 36 6 55236560 55236560 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac EYS 346007 hgsc.bcm.edu 36 6 66120193 66120193 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac EYS 346007 hgsc.bcm.edu 36 6 66261534 66261534 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac KCNQ5 56479 hgsc.bcm.edu 36 6 73899887 73899887 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PHIP 55023 hgsc.bcm.edu 36 6 79714145 79714145 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac GABRR2 2570 hgsc.bcm.edu 36 6 90035579 90035579 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac REV3L 5980 hgsc.bcm.edu 36 6 111800635 111800635 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TPD52L1 7164 hgsc.bcm.edu 36 6 125591987 125591987 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ECT2L 345930 hgsc.bcm.edu 36 6 139263842 139263842 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PLEKHG1 57480 hgsc.bcm.edu 36 6 151193950 151193950 + Silent SNP A A G rs926624 by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MTHFD1L 25902 hgsc.bcm.edu 36 6 151238962 151238962 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac RPS6KA2 6196 hgsc.bcm.edu 36 6 166864782 166864782 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ABR 29 hgsc.bcm.edu 36 17 933603 933603 + Silent SNP A A T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac USP6 9098 hgsc.bcm.edu 36 17 5012937 5012937 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac KIAA0753 9851 hgsc.bcm.edu 36 17 6434595 6434595 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TP53 7157 hgsc.bcm.edu 36 17 7517846 7517846 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MAP2K4 6416 hgsc.bcm.edu 36 17 11954427 11954427 + Missense_Mutation SNP C C G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TEKT3 64518 hgsc.bcm.edu 36 17 15175291 15175291 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SOCS7 122809 hgsc.bcm.edu 36 17 33774790 33774790 + Silent SNP A A C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac WIPF2 147179 hgsc.bcm.edu 36 17 35687979 35687979 + Silent SNP A A C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac KRT39 390792 hgsc.bcm.edu 36 17 36376556 36376556 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ACLY 47 hgsc.bcm.edu 36 17 37295973 37295973 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CDC27 996 hgsc.bcm.edu 36 17 42589410 42589410 + Nonsense_Mutation SNP G G T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac DNAH17 8632 hgsc.bcm.edu 36 17 73931699 73931699 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac RUNX1 861 hgsc.bcm.edu 36 21 35153724 35153724 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ERG 2078 hgsc.bcm.edu 36 21 38694432 38694432 + Missense_Mutation SNP C C G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ERG 2078 hgsc.bcm.edu 36 21 38694433 38694433 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ABCC1 4363 hgsc.bcm.edu 36 16 16054108 16054108 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ACSM5 54988 hgsc.bcm.edu 36 16 20342800 20342800 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac DNAH3 55567 hgsc.bcm.edu 36 16 20955574 20955574 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CDH11 1009 hgsc.bcm.edu 36 16 63539066 63539066 + Missense_Mutation SNP G G T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CDH5 1003 hgsc.bcm.edu 36 16 64989925 64989925 + Silent SNP C C T rs3826229 byCluster;byFrequency TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac LAMA3 3910 hgsc.bcm.edu 36 18 19729020 19729020 + Missense_Mutation SNP G G C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac LAMA3 3910 hgsc.bcm.edu 36 18 19780171 19780171 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CDH2 1000 hgsc.bcm.edu 36 18 23845808 23845808 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac DSG4 147409 hgsc.bcm.edu 36 18 27247379 27247379 + Silent SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SMAD4 4089 hgsc.bcm.edu 36 18 46858649 46858649 + Silent SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SMAD4 4089 hgsc.bcm.edu 36 18 46858695 46858695 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac DOK6 220164 hgsc.bcm.edu 36 18 65576033 65576033 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CRBN 51185 hgsc.bcm.edu 36 3 3191903 3191903 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac VHL 7428 hgsc.bcm.edu 36 3 10163234 10163234 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac LRRFIP2 9209 hgsc.bcm.edu 36 3 37070389 37070389 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac C3orf77 375337 hgsc.bcm.edu 36 3 44348356 44348356 + Missense_Mutation SNP C C G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac EPHA3 2042 hgsc.bcm.edu 36 3 89342300 89342300 + Missense_Mutation SNP G G T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac LNP1 348801 hgsc.bcm.edu 36 3 101653324 101653324 + Silent SNP T T C rs9848109 byCluster TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac COL6A6 131873 hgsc.bcm.edu 36 3 131764904 131764904 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ATP2C1 27032 hgsc.bcm.edu 36 3 132198249 132198249 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac P2RY14 9934 hgsc.bcm.edu 36 3 152414034 152414034 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PIK3CA 5290 hgsc.bcm.edu 36 3 180434779 180434779 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CCDC39 339829 hgsc.bcm.edu 36 3 181862386 181862386 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac YEATS2 55689 hgsc.bcm.edu 36 3 185008581 185008581 + Silent SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ABCC5 10057 hgsc.bcm.edu 36 3 185129296 185129296 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac RAD51AP1 10635 hgsc.bcm.edu 36 12 4535799 4535799 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac VWF 7450 hgsc.bcm.edu 36 12 5931935 5931935 + Silent SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac KLRD1 3824 hgsc.bcm.edu 36 12 10353330 10353330 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac KRAS 3845 hgsc.bcm.edu 36 12 25289551 25289551 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ITPR2 3709 hgsc.bcm.edu 36 12 26525424 26525424 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac C12orf11 55726 hgsc.bcm.edu 36 12 26958661 26958661 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac FAM186A 121006 hgsc.bcm.edu 36 12 49032239 49032239 + Missense_Mutation SNP A A G rs34493444 unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac NDUFA4L2 56901 hgsc.bcm.edu 36 12 55917134 55917134 + Missense_Mutation SNP A A C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SRGAP1 57522 hgsc.bcm.edu 36 12 62806068 62806068 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac POC1B 0 hgsc.bcm.edu 36 12 88343249 88343249 + Silent SNP A A C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac C12orf43 64897 hgsc.bcm.edu 36 12 119933306 119933306 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac WDR66 144406 hgsc.bcm.edu 36 12 120843778 120843778 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac WDR66 144406 hgsc.bcm.edu 36 12 120856559 120856559 + Silent SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac WDR66 144406 hgsc.bcm.edu 36 12 120856566 120856566 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac DNAH10 196385 hgsc.bcm.edu 36 12 122985879 122985879 + Silent SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac RIMBP2 23504 hgsc.bcm.edu 36 12 129507077 129507077 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac AQR 9716 hgsc.bcm.edu 36 15 32950299 32950299 + Silent SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PPIP5K1 9677 hgsc.bcm.edu 36 15 41614642 41614642 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PDIA3 2923 hgsc.bcm.edu 36 15 41850030 41850030 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac WDR72 256764 hgsc.bcm.edu 36 15 51695048 51695048 + Nonsense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MYO9A 4649 hgsc.bcm.edu 36 15 69906337 69906337 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ISLR2 57611 hgsc.bcm.edu 36 15 72212347 72212347 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SNUPN 10073 hgsc.bcm.edu 36 15 73696886 73696886 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ACAN 176 hgsc.bcm.edu 36 15 87201027 87201027 + Missense_Mutation SNP A A G rs12899191 unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CHD2 1106 hgsc.bcm.edu 36 15 91364372 91364372 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ARSD 414 hgsc.bcm.edu 36 X 2843605 2843605 + Nonsense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ARSD 414 hgsc.bcm.edu 36 X 2843628 2843628 + Silent SNP A A C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ARSD 414 hgsc.bcm.edu 36 X 2843631 2843631 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ARSD 414 hgsc.bcm.edu 36 X 2843638 2843638 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ARSD 414 hgsc.bcm.edu 36 X 2843643 2843643 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MAGEB10 139422 hgsc.bcm.edu 36 X 27749806 27749806 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SHROOM4 57477 hgsc.bcm.edu 36 X 50393875 50393875 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PAGE2 203569 hgsc.bcm.edu 36 X 55133203 55133203 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac NLGN3 54413 hgsc.bcm.edu 36 X 70304083 70304083 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ACRC 93953 hgsc.bcm.edu 36 X 70740705 70740705 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac HMGN5 0 hgsc.bcm.edu 36 X 80256868 80256868 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CENPI 2491 hgsc.bcm.edu 36 X 100251613 100251613 + Silent SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ARMCX1 51309 hgsc.bcm.edu 36 X 100695640 100695640 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac GPRASP1 9737 hgsc.bcm.edu 36 X 101797827 101797827 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac RGAG1 57529 hgsc.bcm.edu 36 X 109582345 109582345 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac WDR44 54521 hgsc.bcm.edu 36 X 117411123 117411123 + Silent SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac LONRF3 79836 hgsc.bcm.edu 36 X 117996421 117996421 + Missense_Mutation SNP A A T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac KIAA1210 57481 hgsc.bcm.edu 36 X 118107502 118107502 + Silent SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac BCORL1 63035 hgsc.bcm.edu 36 X 129012437 129012437 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SAGE1 55511 hgsc.bcm.edu 36 X 134818798 134818798 + Silent SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac GPR101 83550 hgsc.bcm.edu 36 X 135941359 135941359 + Silent SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SEC31A 22872 hgsc.bcm.edu 36 4 84007087 84007087 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ADH7 131 hgsc.bcm.edu 36 4 100560946 100560946 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TBCK 0 hgsc.bcm.edu 36 4 107334275 107334275 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ANK2 287 hgsc.bcm.edu 36 4 114504074 114504074 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MYOZ2 51778 hgsc.bcm.edu 36 4 120304894 120304894 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TNIP3 79931 hgsc.bcm.edu 36 4 122273246 122273246 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SORBS2 8470 hgsc.bcm.edu 36 4 186835544 186835544 + Silent SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PPP1CB 5500 hgsc.bcm.edu 36 2 28870328 28870328 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ALK 238 hgsc.bcm.edu 36 2 29373272 29373272 + Silent SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CYP1B1 1545 hgsc.bcm.edu 36 2 38151707 38151707 + Missense_Mutation SNP C C G rs1056836 by2Hit2Allele;byCluster;byFrequency;byHapMap TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MTIF2 4528 hgsc.bcm.edu 36 2 55327012 55327012 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac HSPC159 29094 hgsc.bcm.edu 36 2 64538970 64538970 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ANTXR1 84168 hgsc.bcm.edu 36 2 69253008 69253008 + Missense_Mutation SNP T T A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CD207 50489 hgsc.bcm.edu 36 2 70916343 70916343 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CD207 50489 hgsc.bcm.edu 36 2 70916345 70916345 + Missense_Mutation SNP G G C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac KDM3A 55818 hgsc.bcm.edu 36 2 86531835 86531835 + Silent SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ANKRD36B 57730 hgsc.bcm.edu 36 2 97563437 97563437 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TMEM131 23505 hgsc.bcm.edu 36 2 97744985 97744985 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac IWS1 55677 hgsc.bcm.edu 36 2 127966026 127966026 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SAP130 79595 hgsc.bcm.edu 36 2 128416488 128416488 + Nonsense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MGAT5 4249 hgsc.bcm.edu 36 2 134728583 134728583 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac R3HDM1 23518 hgsc.bcm.edu 36 2 136125853 136125853 + Missense_Mutation SNP G G C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ARHGAP15 55843 hgsc.bcm.edu 36 2 144177513 144177513 + Silent SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PRPF40A 55660 hgsc.bcm.edu 36 2 153241506 153241506 + Silent SNP G G A rs11544718 unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac XIRP2 129446 hgsc.bcm.edu 36 2 167814250 167814250 + Missense_Mutation SNP G G T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TTN 7273 hgsc.bcm.edu 36 2 179105836 179105836 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TTN 7273 hgsc.bcm.edu 36 2 179132911 179132911 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TTN 7273 hgsc.bcm.edu 36 2 179162230 179162230 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CERKL 375298 hgsc.bcm.edu 36 2 182121775 182121775 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CPS1 1589 hgsc.bcm.edu 36 2 211175293 211175293 + Missense_Mutation SNP C C A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ERBB4 2066 hgsc.bcm.edu 36 2 212003958 212003958 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac DNER 92737 hgsc.bcm.edu 36 2 230020488 230020488 + Missense_Mutation SNP G G T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac JAK2 3717 hgsc.bcm.edu 36 9 5060022 5060022 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ASPN 54829 hgsc.bcm.edu 36 9 94276848 94276848 + Missense_Mutation SNP A A C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PTCH1 5727 hgsc.bcm.edu 36 9 97269360 97269360 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MURC 347273 hgsc.bcm.edu 36 9 102388460 102388460 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac GLE1 2733 hgsc.bcm.edu 36 9 130311085 130311085 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TNFSF11 8600 hgsc.bcm.edu 36 13 42078768 42078768 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac RCBTB2 1102 hgsc.bcm.edu 36 13 47984154 47984154 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac GPC6 10082 hgsc.bcm.edu 36 13 92677818 92677818 + Silent SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CUBN 8029 hgsc.bcm.edu 36 10 17182216 17182216 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CDH23 64072 hgsc.bcm.edu 36 10 72940961 72940961 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac LRIT1 26103 hgsc.bcm.edu 36 10 85981789 85981789 + Silent SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PTEN 5728 hgsc.bcm.edu 36 10 89682874 89682874 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TNKS2 80351 hgsc.bcm.edu 36 10 93580683 93580683 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CLPTM1L 81037 hgsc.bcm.edu 36 5 1394910 1394910 + Missense_Mutation SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac FASTKD3 79072 hgsc.bcm.edu 36 5 7920130 7920130 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac DROSHA 29102 hgsc.bcm.edu 36 5 31562353 31562353 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac FAM81B 153643 hgsc.bcm.edu 36 5 94775481 94775481 + Missense_Mutation SNP G G A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ELL2 22936 hgsc.bcm.edu 36 5 95260105 95260105 + Missense_Mutation SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac APC 324 hgsc.bcm.edu 36 5 112203114 112203114 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac FAM13B 51306 hgsc.bcm.edu 36 5 137316988 137316988 + Missense_Mutation SNP A A C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CTNNA1 1495 hgsc.bcm.edu 36 5 138288169 138288169 + Missense_Mutation SNP C C T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ANKHD1 54882 hgsc.bcm.edu 36 5 139897940 139897940 + Silent SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac KIF4B 285643 hgsc.bcm.edu 36 5 154376184 154376184 + Missense_Mutation SNP G G T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac NIPAL4 348938 hgsc.bcm.edu 36 5 156826642 156826642 + Silent SNP A A G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ODZ2 57451 hgsc.bcm.edu 36 5 167585774 167585774 + Missense_Mutation SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac NPM1 4869 hgsc.bcm.edu 36 5 170750931 170750931 + Silent SNP T T G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac UBE2W 55284 hgsc.bcm.edu 36 8 74868906 74868906 + Splice_Site SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TBC1D19 55296 hgsc.bcm.edu 36 4 26346173 26346173 + Splice_Site SNP A A T novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CACNA1B 774 hgsc.bcm.edu 36 9 140126780 140126780 + Splice_Site SNP T T C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac CDK11B 0 hgsc.bcm.edu 36 1 1637753 1637754 + In_Frame_Ins INS - - TTTCTT novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TCHH 7062 hgsc.bcm.edu 36 1 150348002 150348007 + In_Frame_Del DEL CCTGCT CCTGCT - novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 CCTGCT CCTGCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ZNF717 100131827 hgsc.bcm.edu 36 3 75868725 75868726 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac OR5H6 79295 hgsc.bcm.edu 36 3 99466178 99466186 + In_Frame_Del DEL TGTAACCAC TGTAACCAC - novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 TGTAACCAC TGTAACCAC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac APC 324 hgsc.bcm.edu 36 5 112203851 112203851 + Frame_Shift_Del DEL A A - novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac POM121L2 94026 hgsc.bcm.edu 36 6 27384877 27384877 + Frame_Shift_Del DEL T T - novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac MICA 4276 hgsc.bcm.edu 36 6 31488140 31488140 + Frame_Shift_Del DEL G G - rs41557819 unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ZNF292 23036 hgsc.bcm.edu 36 6 88022223 88022224 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac C8orf59 401466 hgsc.bcm.edu 36 8 86314079 86314080 + In_Frame_Ins INS - - AACATT novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ANKRD20A2 441430 hgsc.bcm.edu 36 9 42370182 42370185 + Frame_Shift_Del DEL TACT TACT - novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 TACT TACT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac PRUNE2 158471 hgsc.bcm.edu 36 9 78513955 78513956 + In_Frame_Ins INS - - TGACTGTTGCAG rs11267622 unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac OR6C76 390326 hgsc.bcm.edu 36 12 54107226 54107226 + Frame_Shift_Del DEL A A - novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac WDR66 144406 hgsc.bcm.edu 36 12 120843780 120843781 + In_Frame_Ins INS - - GAGGAGGAGGAGAAA novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac AKAP11 11215 hgsc.bcm.edu 36 13 41774647 41774649 + In_Frame_Del DEL ATT ATT - novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 ATT ATT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac FAM71D 161142 hgsc.bcm.edu 36 14 66741236 66741237 + Frame_Shift_Ins INS - - C novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ZNF720 124411 hgsc.bcm.edu 36 16 31678197 31678198 + Frame_Shift_Ins INS - - A novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac HYDIN 54768 hgsc.bcm.edu 36 16 69512205 69512219 + In_Frame_Del DEL GCGCTCCTTCTCCGT GCGCTCCTTCTCCGT - novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 GCGCTCCTTCTCCGT GCGCTCCTTCTCCGT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac ALPK2 115701 hgsc.bcm.edu 36 18 54355368 54355382 + In_Frame_Del DEL CAGTTGATGTGTCCT CAGTTGATGTGTCCT - novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 CAGTTGATGTGTCCT CAGTTGATGTGTCCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac DEFB132 400830 hgsc.bcm.edu 36 20 186436 186441 + In_Frame_Del DEL TGGTCT TGGTCT - novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 TGGTCT TGGTCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac SYNJ1 8867 hgsc.bcm.edu 36 21 32925799 32925800 + In_Frame_Ins INS - - AGTATT novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac TCEAL6 158931 hgsc.bcm.edu 36 X 101282436 101282437 + Frame_Shift_Ins INS - - G novel unknown TCGA-AA-3861-01A-01W-0995-10 TCGA-AA-3861-10A-01W-0995-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq 7940e76b-8470-46cb-abd2-73b5e334a06a b4dd2640-9541-478a-8070-03130f1057ac