Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	TranscriptID	Exon	ChromChange	AAChange	COSMIC_Codon	COSMIC_Gene	Drug_Target
FGFBP3	143282	broad.mit.edu	36	10	93658110	93658110	+	Silent	SNP	G	C	C	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_152429	exon2	c.C597G	p.P199P	.	.	.
SCYL1	57410	broad.mit.edu	36	11	65061047	65061048	+	Frame_Shift_Ins	INS	-	C	C	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_020680	exon14	c.1831_1832insC	p.A611fs	.	.	.
OR10G9	219870	broad.mit.edu	36	11	123399127	123399127	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001001953	exon1	c.C198G	p.F66L	.	.	.
OR8J1	219477	broad.mit.edu	36	11	55884927	55884927	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001005205	exon1	c.C629A	p.S210Y	.	.	.
CDC42BPG	55561	broad.mit.edu	36	11	64351357	64351357	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_017525	exon33	c.G4240A	p.V1414M	.	.	.
PACS1	55690	broad.mit.edu	36	11	65751586	65751586	+	Silent	SNP	T	C	C	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_018026	exon11	c.T1329C	p.T443T	.	.	.
ISCU	23479	broad.mit.edu	36	12	107482283	107482283	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_014301	exon3	c.G139A	p.V47I	.	.	.
MORN3	283385	broad.mit.edu	36	12	120581569	120581569	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_173855	exon2	c.G214A	p.D72N	.	.	.
GPR133	283383	broad.mit.edu	36	12	130127355	130127355	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_198827	exon14	c.C1530T	p.C510C	.	.	.
SLC6A15	55117	broad.mit.edu	36	12	83803962	83803962	+	Silent	SNP	T	G	G	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_018057	exon3	c.A306C	p.P102P	.	.	.
ERCC5	2073	broad.mit.edu	36	13	102271419	102271419	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_017693	exon5	c.T637A	p.S213T	.	.	.
NBEA	26960	broad.mit.edu	36	13	34668435	34668435	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_015678	exon31	c.G5362A	p.D1788N	.	.	.
FREM2	341640	broad.mit.edu	36	13	38160809	38160809	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_207361	exon1	c.G1328A	p.R443Q	.	.	.
NOVA1	4857	broad.mit.edu	36	14	26019182	26019182	+	Silent	SNP	A	C	C	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_002515	exon3	c.T288G	p.T96T	.	.	.
GABRA5	2558	broad.mit.edu	36	15	24679601	24679601	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001165037	exon6	c.C301T	p.R101X	.	.	.
WDR72	256764	broad.mit.edu	36	15	51779344	51779344	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_182758	exon13	c.C1660T	p.R554W	.	.	.
BNC1	646	broad.mit.edu	36	15	81727890	81727890	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001717	exon2	c.C198T	p.H66H	.	.	.
UMOD	7369	broad.mit.edu	36	16	20256221	20256221	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_003361	exon8	c.C1633A	p.Q545K	.	.	.
SEPT12	124404	broad.mit.edu	36	16	4775844	4775844	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_144605	exon4	c.G339A	p.T113T	.	.	.
CLEC18B	497190	broad.mit.edu	36	16	73002305	73002305	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001011880	exon9	c.C1113T	p.I371I	.	.	.
SPNS2	124976	broad.mit.edu	36	17	4380741	4380741	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001124758	exon4	c.C639T	p.I213I	.	.	.
LAMA1	284217	broad.mit.edu	36	18	7039157	7039157	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_005559	exon5	c.C688T	p.R230C	.	.	.
ZNF526	116115	broad.mit.edu	36	19	47421982	47421982	+	Silent	SNP	A	G	G	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_133444	exon3	c.A1587G	p.Q529Q	.	.	.
LILRA4	23547	broad.mit.edu	36	19	59541238	59541238	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_012276	exon4	c.C436T	p.R146W	.	.	.
LILRA1	11024	broad.mit.edu	36	19	59798100	59798100	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_006863	exon4	c.A229C	p.I77L	.	.	.
COL11A1	1301	broad.mit.edu	36	1	103244447	103244447	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001854	exon16	c.G1696A	p.V566I	.	.	.
KIRREL	55243	broad.mit.edu	36	1	156331179	156331179	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_018240	exon15	c.G1919A	p.R640H	.	.	.
LAMC1	3915	broad.mit.edu	36	1	181361259	181361259	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_002293	exon15	c.G2752T	p.A918S	.	.	.
GPR37L1	9283	broad.mit.edu	36	1	200359087	200359087	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_004767	exon1	c.G373A	p.E125K	.	.	.
ARID1A	8289	broad.mit.edu	36	1	26979445	26979445	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_006015	exon20	c.G6469A	p.D2157N	.	.	.
TTC22	55001	broad.mit.edu	36	1	55026017	55026017	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001114108	exon3	c.G694A	p.A232T	.	.	.
ATG4C	84938	broad.mit.edu	36	1	63057455	63057455	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_178221	exon5	c.T586G	p.Y196D	.	.	.
IL12RB2	3595	broad.mit.edu	36	1	67566639	67566639	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001559	exon5	c.C648T	p.F216F	.	.	.
U2AF1	7307	broad.mit.edu	36	21	43387673	43387673	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_006758	exon7	c.G552C	p.E184D	.	.	.
PKDREJ	10343	broad.mit.edu	36	22	45033422	45033422	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_006071	exon1	c.G4462A	p.E1488K	.	.	.
TPO	7173	broad.mit.edu	36	2	1523482	1523482	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_175721	exon14	c.G2596A	p.A866T	.	.	.
COL5A2	1290	broad.mit.edu	36	2	189630337	189630337	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_000393	exon34	c.C2291T	p.P764L	.	.	.
SPHKAP	80309	broad.mit.edu	36	2	228590598	228590598	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001142644	exon7	c.C3216T	p.G1072G	.	.	.
STON1-GTF2A1L	286749	broad.mit.edu	36	2	48663071	48663071	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001198594	exon1	c.C1795T	p.R599C	.	.	.
CNTN6	27255	broad.mit.edu	36	3	1338375	1338375	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_014461	exon8	c.C803T	p.P268L	.	.	.
SLITRK3	22865	broad.mit.edu	36	3	166391033	166391034	+	Frame_Shift_Del	DEL	TA	-	-	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	TA	TA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_014926	exon2	c.279_280del	p.93_94del	.	.	.
EIF4A2	1974	broad.mit.edu	36	3	187986479	187986481	+	In_Frame_Del	DEL	TAT	-	-	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	TAT	TAT	TAT	-	TAT	TAT	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001967	exon5	c.462_464del	p.154_155del	.	.	.
PCDH10	57575	broad.mit.edu	36	4	134292742	134292742	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_032961	exon1	c.C1997T	p.P666L	.	.	.
APC	324	broad.mit.edu	36	5	112202920	112202920	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_001127511	exon14	c.C3676T	p.Q1226X	.	.	.
NPR3	4883	broad.mit.edu	36	5	32822126	32822126	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_000908	exon8	c.G1541A	p.R514Q	.	.	.
ADAMTS12	81792	broad.mit.edu	36	5	33612100	33612100	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_030955	exon19	c.C3788T	p.T1263M	.	.	.
SLC35B2	347734	broad.mit.edu	36	6	44330139	44330140	+	Splice_Site	INS	-	TG	TG	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	.	.	.	.	.	.	.
ATG5	9474	broad.mit.edu	36	6	106756543	106756543	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_004849	exon7	c.G688A	p.E230K	.	.	.
SCML4	256380	broad.mit.edu	36	6	108177701	108177701	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_198081	exon3	c.C166T	p.R56W	.	.	.
ARG1	383	broad.mit.edu	36	6	131946291	131946291	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_000045	exon7	c.G769A	p.G257S	.	.	.
GPR31	2853	broad.mit.edu	36	6	167490409	167490409	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_005299	exon1	c.C901T	p.R301X	.	.	.
SYNCRIP	10492	broad.mit.edu	36	6	86385292	86385292	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001159673	exon9	c.G949C	p.E317Q	.	.	.
KEL	3792	broad.mit.edu	36	7	142349717	142349717	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_000420	exon18	c.C1963T	p.R655W	.	.	.
HECW1	23072	broad.mit.edu	36	7	43515114	43515114	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_015052	exon24	c.G3888A	p.S1296S	.	.	.
DDX56	54606	broad.mit.edu	36	7	44575262	44575262	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_019082	exon10	c.C1285T	p.R429C	.	.	.
CSMD3	114788	broad.mit.edu	36	8	113306194	113306194	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_198123	exon71	c.G11106A	p.T3702T	.	.	.
OR13F1	138805	broad.mit.edu	36	9	106307242	106307242	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001004485	exon1	c.G878A	p.R293Q	.	.	.
ZCCHC6	79670	broad.mit.edu	36	9	88157580	88157580	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_024617	exon2	c.G355C	p.G119R	.	.	.
IL1RAPL2	26280	broad.mit.edu	36	X	104897840	104897840	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	NM_017416	exon11	c.C1591T	p.L531L	.	.	.
AGTR2	186	broad.mit.edu	36	X	115217679	115217679	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_000686	exon3	c.T118A	p.S40T	.	.	.
UBE2NL	389898	broad.mit.edu	36	X	142795043	142795043	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_001012989	exon1	c.C175G	p.L59V	.	.	.
FGD1	2245	broad.mit.edu	36	X	54508690	54508690	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_004463	exon8	c.C1555T	p.R519C	.	.	.
FAAH2	158584	broad.mit.edu	36	X	57330096	57330096	+	Nonsense_Mutation	SNP	C	G	G	novel	unknown	TCGA-AA-A017-01A-01W-A00E-09	TCGA-AA-A017-10A-01W-A00E-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA			Illumina HiSeq	NM_174912	exon1	c.C113G	p.S38X	.	.	.