Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID GPNMB 10457 hgsc.bcm.edu 36 7 23260328 23260328 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 INHBA 3624 hgsc.bcm.edu 36 7 41696132 41696132 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ACTL6B 51412 hgsc.bcm.edu 36 7 100091029 100091029 + Silent SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CTTNBP2 83992 hgsc.bcm.edu 36 7 117219846 117219846 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 HIPK2 28996 hgsc.bcm.edu 36 7 138919245 138919245 + Silent SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 BRAF 673 hgsc.bcm.edu 36 7 140099624 140099624 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 MLL3 58508 hgsc.bcm.edu 36 7 151477166 151477166 + Missense_Mutation SNP G G C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 MLL3 58508 hgsc.bcm.edu 36 7 151482109 151482109 + Silent SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 RBCK1 10616 hgsc.bcm.edu 36 20 348074 348074 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PAK7 57144 hgsc.bcm.edu 36 20 9508846 9508846 + Silent SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CD93 22918 hgsc.bcm.edu 36 20 23013821 23013821 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 IGLL1 3543 hgsc.bcm.edu 36 22 22245474 22245474 + Silent SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 SMARCB1 6598 hgsc.bcm.edu 36 22 22475587 22475587 + Silent SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CHEK2 11200 hgsc.bcm.edu 36 22 27422946 27422946 + Silent SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TRIOBP 11078 hgsc.bcm.edu 36 22 36450000 36450000 + Silent SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 MYH7 4625 hgsc.bcm.edu 36 14 22954764 22954764 + Missense_Mutation SNP C C T rs45464193 unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 SIPA1L1 26037 hgsc.bcm.edu 36 14 71155263 71155263 + Missense_Mutation SNP G G C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 NRXN3 9369 hgsc.bcm.edu 36 14 78504379 78504379 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TSHR 7253 hgsc.bcm.edu 36 14 80679161 80679161 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TSHR 7253 hgsc.bcm.edu 36 14 80679162 80679162 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PPP4R4 57718 hgsc.bcm.edu 36 14 93782544 93782544 + Missense_Mutation SNP A A C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 DICER1 23405 hgsc.bcm.edu 36 14 94630229 94630229 + Missense_Mutation SNP C C G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 SEMA6B 10501 hgsc.bcm.edu 36 19 4509069 4509069 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 MUC16 94025 hgsc.bcm.edu 36 19 8935936 8935936 + Silent SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 RASAL3 64926 hgsc.bcm.edu 36 19 15423668 15423668 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 MRPL34 64981 hgsc.bcm.edu 36 19 17278128 17278128 + Silent SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ZNF208 7757 hgsc.bcm.edu 36 19 21948757 21948757 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CCNE1 898 hgsc.bcm.edu 36 19 34999986 34999986 + Silent SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PSENEN 55851 hgsc.bcm.edu 36 19 40929526 40929526 + Silent SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 LTBP4 8425 hgsc.bcm.edu 36 19 45814747 45814747 + Silent SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ADCK4 79934 hgsc.bcm.edu 36 19 45893780 45893780 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PSG4 5672 hgsc.bcm.edu 36 19 48391037 48391037 + Missense_Mutation SNP C C T rs707749 unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 LRRC4B 94030 hgsc.bcm.edu 36 19 55713750 55713750 + Silent SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PXDNL 137902 hgsc.bcm.edu 36 8 52483903 52483903 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ARFGEF1 10565 hgsc.bcm.edu 36 8 68366671 68366671 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 SLC30A8 169026 hgsc.bcm.edu 36 8 118239253 118239253 + Silent SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 NOV 6134 hgsc.bcm.edu 36 8 120499649 120499649 + Missense_Mutation SNP G G C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CDC42 998 hgsc.bcm.edu 36 1 22277648 22277648 + Silent SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 YBX1 4904 hgsc.bcm.edu 36 1 42939246 42939246 + Silent SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 IL12RB2 3595 hgsc.bcm.edu 36 1 67560091 67560091 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TNNI3K 51086 hgsc.bcm.edu 36 1 74677770 74677770 + Silent SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CCDC18 343099 hgsc.bcm.edu 36 1 93454868 93454868 + Missense_Mutation SNP G G C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PALMD 54873 hgsc.bcm.edu 36 1 99927155 99927155 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 GJA8 2703 hgsc.bcm.edu 36 1 145847606 145847606 + Silent SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 IVL 3713 hgsc.bcm.edu 36 1 151149735 151149735 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CD1E 913 hgsc.bcm.edu 36 1 156590800 156590800 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ATP1A4 480 hgsc.bcm.edu 36 1 158395466 158395466 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CD84 8832 hgsc.bcm.edu 36 1 158801956 158801956 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ARHGAP30 257106 hgsc.bcm.edu 36 1 159288125 159288125 + Silent SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 FCRLA 84824 hgsc.bcm.edu 36 1 159947764 159947764 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 RGS4 5999 hgsc.bcm.edu 36 1 161310852 161310852 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 HMCN1 83872 hgsc.bcm.edu 36 1 184306404 184306404 + Silent SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ASPM 259266 hgsc.bcm.edu 36 1 195337280 195337280 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ZC3H11A 9877 hgsc.bcm.edu 36 1 202064084 202064084 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 NFASC 23114 hgsc.bcm.edu 36 1 203217753 203217753 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 USH2A 7399 hgsc.bcm.edu 36 1 214039056 214039056 + Silent SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 OBSCN 84033 hgsc.bcm.edu 36 1 226511077 226511077 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 SIPA1L2 57568 hgsc.bcm.edu 36 1 230693243 230693243 + Silent SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 FMN2 56776 hgsc.bcm.edu 36 1 238438543 238438543 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 WEE1 7465 hgsc.bcm.edu 36 11 9555326 9555326 + Nonsense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ELP4 26610 hgsc.bcm.edu 36 11 31628240 31628240 + Silent SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 AMBRA1 55626 hgsc.bcm.edu 36 11 46522144 46522144 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 AMBRA1 55626 hgsc.bcm.edu 36 11 46522145 46522145 + Nonsense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 OR8H2 390151 hgsc.bcm.edu 36 11 55629113 55629113 + Missense_Mutation SNP A A G rs61746549 unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 SPCS2 9789 hgsc.bcm.edu 36 11 74354576 74354576 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 MMP3 4314 hgsc.bcm.edu 36 11 102215094 102215094 + Silent SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 GRIA4 2893 hgsc.bcm.edu 36 11 105302711 105302711 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ATM 472 hgsc.bcm.edu 36 11 107688401 107688401 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ATM 472 hgsc.bcm.edu 36 11 107705118 107705118 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TECTA 7007 hgsc.bcm.edu 36 11 120503730 120503730 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 FAM118B 79607 hgsc.bcm.edu 36 11 125625668 125625668 + Missense_Mutation SNP G G C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 C6orf138 442213 hgsc.bcm.edu 36 6 47955106 47955106 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TFAP2D 83741 hgsc.bcm.edu 36 6 50826952 50826952 + Silent SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CD109 135228 hgsc.bcm.edu 36 6 74573347 74573347 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 MDN1 23195 hgsc.bcm.edu 36 6 90442620 90442620 + Nonsense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 MDN1 23195 hgsc.bcm.edu 36 6 90556623 90556623 + Missense_Mutation SNP C C G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 C6orf170 221322 hgsc.bcm.edu 36 6 121443616 121443616 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 C6orf170 221322 hgsc.bcm.edu 36 6 121680364 121680364 + Silent SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TNK1 8711 hgsc.bcm.edu 36 17 7228595 7228595 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 BRCA1 672 hgsc.bcm.edu 36 17 38509758 38509758 + Silent SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 SLC25A39 51629 hgsc.bcm.edu 36 17 39755330 39755330 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ITGA2B 3674 hgsc.bcm.edu 36 17 39819007 39819007 + Silent SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 HOXB5 3215 hgsc.bcm.edu 36 17 44026035 44026035 + Silent SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 MYST2 11143 hgsc.bcm.edu 36 17 45248245 45248245 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PPM1E 22843 hgsc.bcm.edu 36 17 54397951 54397951 + Nonsense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TLK2 11011 hgsc.bcm.edu 36 17 58004311 58004311 + Missense_Mutation SNP A A T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 C21orf56 84221 hgsc.bcm.edu 36 21 46406026 46406026 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CREBBP 1387 hgsc.bcm.edu 36 16 3772858 3772858 + Silent SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ZNF646 9726 hgsc.bcm.edu 36 16 30999219 30999219 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 RPRD1A 55197 hgsc.bcm.edu 36 18 31860957 31860957 + Silent SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 FHOD3 91010 hgsc.bcm.edu 36 18 32576789 32576789 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TCEB3B 51224 hgsc.bcm.edu 36 18 42814141 42814141 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ATP9B 374868 hgsc.bcm.edu 36 18 74957468 74957468 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 EOMES 8320 hgsc.bcm.edu 36 3 27735905 27735905 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 DCBLD2 131566 hgsc.bcm.edu 36 3 100001353 100001353 + Silent SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 KIAA1524 57650 hgsc.bcm.edu 36 3 109753798 109753798 + Silent SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 VEPH1 79674 hgsc.bcm.edu 36 3 158628852 158628852 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PIK3CA 5290 hgsc.bcm.edu 36 3 180399585 180399585 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PIK3CA 5290 hgsc.bcm.edu 36 3 180399623 180399623 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PIK3CA 5290 hgsc.bcm.edu 36 3 180418785 180418785 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PIK3CA 5290 hgsc.bcm.edu 36 3 180434606 180434606 + Silent SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 SOX2 6657 hgsc.bcm.edu 36 3 182913043 182913043 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 RTP1 132112 hgsc.bcm.edu 36 3 188400455 188400455 + Nonsense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PIK3C2G 5288 hgsc.bcm.edu 36 12 18549502 18549502 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 WDR66 144406 hgsc.bcm.edu 36 12 120854166 120854166 + Silent SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 DNAH10 196385 hgsc.bcm.edu 36 12 122918014 122918014 + Silent SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CHFR 55743 hgsc.bcm.edu 36 12 131943206 131943206 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 HERC2 8924 hgsc.bcm.edu 36 15 26167362 26167362 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TMEM62 80021 hgsc.bcm.edu 36 15 41226041 41226041 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 MCTP2 55784 hgsc.bcm.edu 36 15 92689381 92689381 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 KDM6A 7403 hgsc.bcm.edu 36 X 44814155 44814155 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 SHROOM4 57477 hgsc.bcm.edu 36 X 50395015 50395015 + Silent SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ZMAT1 84460 hgsc.bcm.edu 36 X 101025269 101025269 + Silent SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 VSIG1 340547 hgsc.bcm.edu 36 X 107196873 107196873 + Nonsense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ARHGEF6 9459 hgsc.bcm.edu 36 X 135657387 135657387 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 GPR101 83550 hgsc.bcm.edu 36 X 135940734 135940734 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 EVC2 132884 hgsc.bcm.edu 36 4 5715820 5715820 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 SLIT2 9353 hgsc.bcm.edu 36 4 20139677 20139677 + Silent SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 GPR125 166647 hgsc.bcm.edu 36 4 22049013 22049013 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 NFXL1 152518 hgsc.bcm.edu 36 4 47593388 47593388 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 KIT 3815 hgsc.bcm.edu 36 4 55286889 55286889 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 UGT2B11 10720 hgsc.bcm.edu 36 4 70114744 70114744 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 FAM190A 0 hgsc.bcm.edu 36 4 91540243 91540243 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 FAT4 79633 hgsc.bcm.edu 36 4 126460447 126460447 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 FAT4 79633 hgsc.bcm.edu 36 4 126592468 126592468 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 GAB1 128869 hgsc.bcm.edu 36 4 144556255 144556255 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 MARCH1 55016 hgsc.bcm.edu 36 4 164726481 164726481 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 KLKB1 3818 hgsc.bcm.edu 36 4 187414210 187414210 + Silent SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 KCNS3 3790 hgsc.bcm.edu 36 2 17976259 17976259 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 C2orf44 80304 hgsc.bcm.edu 36 2 24115308 24115308 + Silent SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 EFEMP1 2202 hgsc.bcm.edu 36 2 55951667 55951667 + Missense_Mutation SNP G G C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CLEC4F 165530 hgsc.bcm.edu 36 2 70896853 70896853 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TPRKB 51002 hgsc.bcm.edu 36 2 73810631 73810631 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ADRA2B 151 hgsc.bcm.edu 36 2 96145322 96145322 + Silent SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 XIRP2 129446 hgsc.bcm.edu 36 2 167700807 167700807 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 SP3 6670 hgsc.bcm.edu 36 2 174528838 174528838 + Silent SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TTN 7273 hgsc.bcm.edu 36 2 179103896 179103896 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TTN 7273 hgsc.bcm.edu 36 2 179142328 179142328 + Silent SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TTN 7273 hgsc.bcm.edu 36 2 179143637 179143637 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 C2orf67 151050 hgsc.bcm.edu 36 2 210648571 210648571 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ERBB4 2066 hgsc.bcm.edu 36 2 212275076 212275076 + Silent SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 HDLBP 3069 hgsc.bcm.edu 36 2 241818910 241818910 + Silent SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 FREM1 158326 hgsc.bcm.edu 36 9 14787515 14787515 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TAF1L 138474 hgsc.bcm.edu 36 9 32624260 32624260 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 FAM163B 642968 hgsc.bcm.edu 36 9 135434191 135434191 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ENTPD2 954 hgsc.bcm.edu 36 9 139064192 139064192 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 HTR2A 3356 hgsc.bcm.edu 36 13 46307197 46307197 + Nonsense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 RB1 5925 hgsc.bcm.edu 36 13 47779503 47779503 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 LPAR6 0 hgsc.bcm.edu 36 13 47883901 47883901 + Silent SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 SYNPO2L 79933 hgsc.bcm.edu 36 10 75080682 75080682 + Silent SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 DLG5 9231 hgsc.bcm.edu 36 10 79251228 79251228 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PTEN 5728 hgsc.bcm.edu 36 10 89643846 89643846 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PTEN 5728 hgsc.bcm.edu 36 10 89710691 89710691 + Nonsense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PTEN 5728 hgsc.bcm.edu 36 10 89710724 89710724 + Nonsense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PTEN 5728 hgsc.bcm.edu 36 10 89710843 89710843 + Silent SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 LOXL4 84171 hgsc.bcm.edu 36 10 100012598 100012598 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CCDC147 159686 hgsc.bcm.edu 36 10 106118299 106118299 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 EIF3A 8661 hgsc.bcm.edu 36 10 120791882 120791882 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 FAM175B 23172 hgsc.bcm.edu 36 10 126485434 126485434 + Silent SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ADAMTS16 170690 hgsc.bcm.edu 36 5 5235218 5235218 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CTNND2 1501 hgsc.bcm.edu 36 5 11026729 11026729 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 DNAH5 1767 hgsc.bcm.edu 36 5 13860741 13860741 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CDH9 1007 hgsc.bcm.edu 36 5 26925728 26925728 + Missense_Mutation SNP C C G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 FBXO4 26272 hgsc.bcm.edu 36 5 41961335 41961335 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PLK2 10769 hgsc.bcm.edu 36 5 57790673 57790673 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ERAP1 51752 hgsc.bcm.edu 36 5 96147252 96147252 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 MAN2A1 4124 hgsc.bcm.edu 36 5 109148488 109148488 + Silent SNP A A G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 APC 324 hgsc.bcm.edu 36 5 112190790 112190790 + Nonsense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PCDHA3 56145 hgsc.bcm.edu 36 5 140162501 140162501 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PCDHA13 56136 hgsc.bcm.edu 36 5 140242799 140242799 + Silent SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PCDHGB3 56102 hgsc.bcm.edu 36 5 140730615 140730615 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ARSI 340075 hgsc.bcm.edu 36 5 149657580 149657580 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 SLIT3 6586 hgsc.bcm.edu 36 5 168182854 168182854 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 NSD1 64324 hgsc.bcm.edu 36 5 176570802 176570802 + Missense_Mutation SNP C C G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 PPP6R3 0 hgsc.bcm.edu 36 11 68093942 68093942 + Splice_Site SNP G G A novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 HERC1 8925 hgsc.bcm.edu 36 15 61748951 61748951 + Splice_Site SNP C C T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TBX19 9095 hgsc.bcm.edu 36 1 166548644 166548644 + Frame_Shift_Del DEL G G - novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 CEP350 9857 hgsc.bcm.edu 36 1 178256213 178256218 + In_Frame_Del DEL AGAAGA AGAAGA - novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 AGAAGA AGAAGA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 OR2T35 403244 hgsc.bcm.edu 36 1 246868547 246868550 + Frame_Shift_Del DEL AGAT AGAT - novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 AGAT AGAT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ADAMTS9 56999 hgsc.bcm.edu 36 3 64493949 64493949 + Frame_Shift_Del DEL G G - novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 ZNF717 100131827 hgsc.bcm.edu 36 3 75869005 75869013 + In_Frame_Del DEL CTACATTCT CTACATTCT - novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 CTACATTCT CTACATTCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 MUC4 4585 hgsc.bcm.edu 36 3 196993221 196993316 + In_Frame_Del DEL CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA - novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 N4BP2 55728 hgsc.bcm.edu 36 4 39781134 39781134 + Frame_Shift_Del DEL C C - novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 RP1L1 94137 hgsc.bcm.edu 36 8 10505081 10505083 + In_Frame_Del DEL CTC CTC - novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 CTC CTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 RP1L1 94137 hgsc.bcm.edu 36 8 10505091 10505096 + In_Frame_Del DEL TCCTTC TCCTTC - novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 TCCTTC TCCTTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 RP1L1 94137 hgsc.bcm.edu 36 8 10505116 10505117 + In_Frame_Ins INS - - CCC novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 IARS 3376 hgsc.bcm.edu 36 9 94079985 94079986 + Frame_Shift_Ins INS - - G novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 OR6C76 390326 hgsc.bcm.edu 36 12 54107226 54107226 + Frame_Shift_Del DEL A A - novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 VPS36 51028 hgsc.bcm.edu 36 13 51905826 51905827 + Frame_Shift_Ins INS - - T novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 KRTAP4-1 85285 hgsc.bcm.edu 36 17 36594322 36594378 + Frame_Shift_Del DEL CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG - novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 USP36 57602 hgsc.bcm.edu 36 17 74310144 74310149 + In_Frame_Del DEL TTTTTC TTTTTC - novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 TTTTTC TTTTTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TGIF1 7050 hgsc.bcm.edu 36 18 3446403 3446418 + Frame_Shift_Del DEL TTCCCTTGGACCTTTC TTCCCTTGGACCTTTC - novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 TTCCCTTGGACCTTTC TTCCCTTGGACCTTTC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614 TXNDC2 84203 hgsc.bcm.edu 36 18 9877389 9877433 + In_Frame_Del DEL GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA - novel unknown TCGA-DM-A28C-01A-11D-A16V-10 TCGA-DM-A28C-10A-01D-A16V-10 GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq a75e6e54-761a-4eee-9619-1da578a3c7a0 45531413-169f-4337-834e-dec2f3548614