Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID DNAH11 8701 hgsc.bcm.edu 36 7 21606828 21606828 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 DNAH11 8701 hgsc.bcm.edu 36 7 21824428 21824428 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 GPR141 353345 hgsc.bcm.edu 36 7 37747315 37747315 + Nonsense_Mutation SNP T T A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 COL1A2 1278 hgsc.bcm.edu 36 7 93892467 93892467 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 RELN 5649 hgsc.bcm.edu 36 7 102900524 102900524 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 SLC26A4 5172 hgsc.bcm.edu 36 7 107137775 107137775 + Silent SNP C C T rs17154347 byCluster;byFrequency;byHapMap TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PTPRZ1 5803 hgsc.bcm.edu 36 7 121439515 121439515 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 AASS 10157 hgsc.bcm.edu 36 7 121545713 121545713 + Missense_Mutation SNP T T A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 NCOA6 23054 hgsc.bcm.edu 36 20 32801694 32801694 + Silent SNP A A T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CEP250 11190 hgsc.bcm.edu 36 20 33517036 33517036 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ERGIC3 51614 hgsc.bcm.edu 36 20 33608168 33608168 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 NCOA3 8202 hgsc.bcm.edu 36 20 45697856 45697856 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 OR11G2 390439 hgsc.bcm.edu 36 14 19735810 19735810 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 C14orf39 317761 hgsc.bcm.edu 36 14 59973447 59973447 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 MUC16 94025 hgsc.bcm.edu 36 19 8944354 8944354 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ZNF700 90592 hgsc.bcm.edu 36 19 11921707 11921707 + Missense_Mutation SNP A A C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 TNPO2 30000 hgsc.bcm.edu 36 19 12673442 12673442 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ZNF569 148266 hgsc.bcm.edu 36 19 42595489 42595489 + Missense_Mutation SNP A A C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 FOXA3 3171 hgsc.bcm.edu 36 19 51068146 51068146 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 GYS1 2997 hgsc.bcm.edu 36 19 54164506 54164506 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 USP17L2 0 hgsc.bcm.edu 36 8 12032583 12032583 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 MYST3 7994 hgsc.bcm.edu 36 8 41951494 41951494 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 RB1CC1 9821 hgsc.bcm.edu 36 8 53717637 53717637 + Silent SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 XKR4 114786 hgsc.bcm.edu 36 8 56432820 56432820 + Nonsense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 NCOA2 10499 hgsc.bcm.edu 36 8 71238276 71238276 + Silent SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CDH17 1015 hgsc.bcm.edu 36 8 95258000 95258000 + Silent SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 RAD54B 25788 hgsc.bcm.edu 36 8 95489072 95489072 + Silent SNP C C A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PLEC 0 hgsc.bcm.edu 36 8 145068337 145068337 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ERRFI1 54206 hgsc.bcm.edu 36 1 7997991 7997991 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CROCC 9696 hgsc.bcm.edu 36 1 17129563 17129563 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ZMYM6 9204 hgsc.bcm.edu 36 1 35225493 35225493 + Missense_Mutation SNP A A T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CLSPN 63967 hgsc.bcm.edu 36 1 35998743 35998743 + Silent SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ZSWIM5 57643 hgsc.bcm.edu 36 1 45298367 45298367 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 HOOK1 51361 hgsc.bcm.edu 36 1 60096729 60096729 + Silent SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 MIER1 57708 hgsc.bcm.edu 36 1 67184456 67184456 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 MCOLN3 55283 hgsc.bcm.edu 36 1 85259408 85259408 + Missense_Mutation SNP C C G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 FAM46C 54855 hgsc.bcm.edu 36 1 117967959 117967959 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 SV2A 9900 hgsc.bcm.edu 36 1 148151592 148151592 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 IVL 3713 hgsc.bcm.edu 36 1 151149712 151149712 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 TNN 63923 hgsc.bcm.edu 36 1 173333176 173333176 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 TNR 7143 hgsc.bcm.edu 36 1 173642273 173642273 + Silent SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PPFIA4 8497 hgsc.bcm.edu 36 1 201304217 201304217 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CR1 1378 hgsc.bcm.edu 36 1 205807860 205807860 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 MPPED2 744 hgsc.bcm.edu 36 11 30392403 30392403 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 BEST1 7439 hgsc.bcm.edu 36 11 61482304 61482304 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 SPTBN2 6712 hgsc.bcm.edu 36 11 66234767 66234767 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 P2RY6 5031 hgsc.bcm.edu 36 11 72686193 72686193 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ATM 472 hgsc.bcm.edu 36 11 107704991 107704991 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 USP28 57646 hgsc.bcm.edu 36 11 113188247 113188247 + Missense_Mutation SNP G G C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CBL 867 hgsc.bcm.edu 36 11 118650863 118650863 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 TNXB 7148 hgsc.bcm.edu 36 6 32149526 32149526 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 COL11A2 1302 hgsc.bcm.edu 36 6 33254099 33254099 + Silent SNP G G A rs41266697 unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ITPR3 3710 hgsc.bcm.edu 36 6 33752653 33752653 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 COL21A1 81578 hgsc.bcm.edu 36 6 56143453 56143453 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 EYS 346007 hgsc.bcm.edu 36 6 65679145 65679145 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 EYS 346007 hgsc.bcm.edu 36 6 65679158 65679158 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 COL19A1 1310 hgsc.bcm.edu 36 6 70956768 70956768 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 KPNA5 3841 hgsc.bcm.edu 36 6 117152187 117152187 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 FNDC1 84624 hgsc.bcm.edu 36 6 159572950 159572950 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 C6orf70 55780 hgsc.bcm.edu 36 6 169923520 169923520 + Nonsense_Mutation SNP A A T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 TP53 7157 hgsc.bcm.edu 36 17 7517810 7517810 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 KCNJ12 3768 hgsc.bcm.edu 36 17 21260314 21260314 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 GGNBP2 79893 hgsc.bcm.edu 36 17 32011889 32011889 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 KRT14 3861 hgsc.bcm.edu 36 17 36993339 36993339 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 KIF2B 84643 hgsc.bcm.edu 36 17 49256303 49256303 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 NOL11 25926 hgsc.bcm.edu 36 17 63148006 63148006 + Silent SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 HEXDC 284004 hgsc.bcm.edu 36 17 77986887 77986887 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 C17orf62 79415 hgsc.bcm.edu 36 17 77997082 77997082 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 MSLNL 401827 hgsc.bcm.edu 36 16 770434 770434 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 MSLNL 401827 hgsc.bcm.edu 36 16 770603 770603 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CDH5 1003 hgsc.bcm.edu 36 16 64970834 64970834 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CDH1 51343 hgsc.bcm.edu 36 16 67403600 67403600 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CACNA2D3 55799 hgsc.bcm.edu 36 3 54880687 54880687 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 OR5H6 79295 hgsc.bcm.edu 36 3 99466472 99466472 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PLD1 5589 hgsc.bcm.edu 36 3 172936028 172936028 + Silent SNP T T G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 LRRC15 131578 hgsc.bcm.edu 36 3 195562153 195562153 + Silent SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ANO2 57101 hgsc.bcm.edu 36 12 5557916 5557916 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ZNF384 171017 hgsc.bcm.edu 36 12 6657607 6657607 + Silent SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 GRIN2B 2904 hgsc.bcm.edu 36 12 13616076 13616076 + Silent SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 C12orf60 144608 hgsc.bcm.edu 36 12 14867397 14867397 + Silent SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 KRAS 3845 hgsc.bcm.edu 36 12 25289551 25289551 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 FAM186A 121006 hgsc.bcm.edu 36 12 49030432 49030432 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 LARP4 113251 hgsc.bcm.edu 36 12 49155582 49155582 + Nonsense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ATF1 2668 hgsc.bcm.edu 36 12 49499695 49499695 + Nonsense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 OR6C1 390321 hgsc.bcm.edu 36 12 54001155 54001155 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ATP5B 506 hgsc.bcm.edu 36 12 55322591 55322591 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 GABRB3 2562 hgsc.bcm.edu 36 15 24417723 24417723 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 DMXL2 23312 hgsc.bcm.edu 36 15 49616266 49616266 + Missense_Mutation SNP A A T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 SCAPER 49855 hgsc.bcm.edu 36 15 74844369 74844369 + Silent SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 NLGN4X 57502 hgsc.bcm.edu 36 X 5821015 5821015 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 BEND2 139105 hgsc.bcm.edu 36 X 18144654 18144654 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 RPS6KA3 6197 hgsc.bcm.edu 36 X 20100891 20100891 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 IL1RAPL1 11141 hgsc.bcm.edu 36 X 29882676 29882676 + Nonsense_Mutation SNP A A T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 KDM6A 7403 hgsc.bcm.edu 36 X 44835012 44835012 + Silent SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 USP11 8237 hgsc.bcm.edu 36 X 46989218 46989218 + Silent SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 SHROOM4 57477 hgsc.bcm.edu 36 X 50367589 50367589 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 FGD1 2245 hgsc.bcm.edu 36 X 54489431 54489431 + Silent SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ARR3 407 hgsc.bcm.edu 36 X 69412834 69412834 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 SLC7A3 84889 hgsc.bcm.edu 36 X 70066553 70066553 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 TAF1 6872 hgsc.bcm.edu 36 X 70520544 70520544 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CYLC1 1538 hgsc.bcm.edu 36 X 83015560 83015560 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 MUM1L1 139221 hgsc.bcm.edu 36 X 105337358 105337358 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PAK3 8874 hgsc.bcm.edu 36 X 110292819 110292819 + Silent SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CUL4B 8450 hgsc.bcm.edu 36 X 119552419 119552419 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 SLC25A14 9016 hgsc.bcm.edu 36 X 129310991 129310991 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 MAP7D3 79649 hgsc.bcm.edu 36 X 135130618 135130618 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 GPR112 139378 hgsc.bcm.edu 36 X 135257593 135257593 + Silent SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 MCF2 4168 hgsc.bcm.edu 36 X 138524741 138524741 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 DUSP9 1852 hgsc.bcm.edu 36 X 152568777 152568777 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PSAPL1 768239 hgsc.bcm.edu 36 4 7486844 7486844 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 KIT 3815 hgsc.bcm.edu 36 4 55286960 55286960 + Silent SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 KIT 3815 hgsc.bcm.edu 36 4 55288188 55288188 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 KIT 3815 hgsc.bcm.edu 36 4 55290357 55290357 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 FAM175A 84142 hgsc.bcm.edu 36 4 84602776 84602776 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 USP53 54532 hgsc.bcm.edu 36 4 120408929 120408929 + Silent SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 OTOF 9381 hgsc.bcm.edu 36 2 26558827 26558827 + Silent SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PPM1B 5495 hgsc.bcm.edu 36 2 44282476 44282476 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 AAK1 22848 hgsc.bcm.edu 36 2 69605686 69605686 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 TMEM131 23505 hgsc.bcm.edu 36 2 97780330 97780330 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 IL18RAP 8807 hgsc.bcm.edu 36 2 102426176 102426176 + Missense_Mutation SNP C C G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 TSN 7247 hgsc.bcm.edu 36 2 122237103 122237103 + Silent SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 YSK4 80122 hgsc.bcm.edu 36 2 135455302 135455302 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 SPOPL 339745 hgsc.bcm.edu 36 2 139025071 139025071 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 LRP1B 53353 hgsc.bcm.edu 36 2 141287764 141287764 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 KCNH7 90134 hgsc.bcm.edu 36 2 163401402 163401402 + Silent SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CSRNP3 80034 hgsc.bcm.edu 36 2 166241181 166241181 + Silent SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 TTC21B 79809 hgsc.bcm.edu 36 2 166478346 166478346 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 TTN 7273 hgsc.bcm.edu 36 2 179178103 179178103 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 FAM171B 165215 hgsc.bcm.edu 36 2 187324231 187324231 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PIKFYVE 200576 hgsc.bcm.edu 36 2 208923024 208923024 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 COL6A3 1293 hgsc.bcm.edu 36 2 237961059 237961059 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PTPRD 5789 hgsc.bcm.edu 36 9 8331109 8331109 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 DAPK1 1612 hgsc.bcm.edu 36 9 89501871 89501871 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CTSL1 1514 hgsc.bcm.edu 36 9 89532445 89532445 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 RGS3 5998 hgsc.bcm.edu 36 9 115264276 115264276 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 FLT1 2321 hgsc.bcm.edu 36 13 27877999 27877999 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 BRCA2 675 hgsc.bcm.edu 36 13 31870721 31870721 + Silent SNP A A T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 N4BP2L1 90634 hgsc.bcm.edu 36 13 31876397 31876397 + Silent SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 SPRY2 10253 hgsc.bcm.edu 36 13 79809656 79809656 + Silent SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 APBB1IP 54518 hgsc.bcm.edu 36 10 26870560 26870560 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ANKRD30A 91074 hgsc.bcm.edu 36 10 37471021 37471021 + Missense_Mutation SNP G G C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PTEN 5728 hgsc.bcm.edu 36 10 89710689 89710689 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PTEN 5728 hgsc.bcm.edu 36 10 89710854 89710854 + Missense_Mutation SNP A A G novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 C10orf79 80217 hgsc.bcm.edu 36 10 105910855 105910855 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 GSTO2 119391 hgsc.bcm.edu 36 10 106047396 106047396 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 NRAP 65083 hgsc.bcm.edu 36 10 115381301 115381301 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PTPRE 5791 hgsc.bcm.edu 36 10 129756508 129756508 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 DNAH5 1767 hgsc.bcm.edu 36 5 13938260 13938260 + Missense_Mutation SNP C C A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 FAM134B 54463 hgsc.bcm.edu 36 5 16531974 16531974 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 NIPBL 25836 hgsc.bcm.edu 36 5 37062132 37062132 + Silent SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 RASGRF2 5924 hgsc.bcm.edu 36 5 80402130 80402130 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 VCAN 1462 hgsc.bcm.edu 36 5 82871992 82871992 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 APC 324 hgsc.bcm.edu 36 5 112190731 112190731 + Missense_Mutation SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 APC 324 hgsc.bcm.edu 36 5 112192486 112192486 + Missense_Mutation SNP G G T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 APC 324 hgsc.bcm.edu 36 5 112201603 112201603 + Nonsense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PCDHA11 56138 hgsc.bcm.edu 36 5 140231100 140231100 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PCDHA12 56137 hgsc.bcm.edu 36 5 140236851 140236851 + Missense_Mutation SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PCDHB6 56130 hgsc.bcm.edu 36 5 140510322 140510322 + Silent SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PCDHB13 56123 hgsc.bcm.edu 36 5 140575941 140575941 + Missense_Mutation SNP G G A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 G G Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 KCNIP1 30820 hgsc.bcm.edu 36 5 169713536 169713536 + Silent SNP C C T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 FAM153B 202134 hgsc.bcm.edu 36 5 175452854 175452854 + Missense_Mutation SNP A A T novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CLDN10 9071 hgsc.bcm.edu 36 13 95003230 95003230 + Splice_Site SNP T T C novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 SPATA3 130560 hgsc.bcm.edu 36 2 231569277 231569303 + In_Frame_Del DEL CAGCAGCCTAGCCCTGAATCCACACCA CAGCAGCCTAGCCCTGAATCCACACCA - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 CAGCAGCCTAGCCCTGAATCCACACCA CAGCAGCCTAGCCCTGAATCCACACCA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ZNF717 100131827 hgsc.bcm.edu 36 3 75868725 75868726 + Frame_Shift_Ins INS - - A novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 ZNF717 100131827 hgsc.bcm.edu 36 3 75869005 75869013 + In_Frame_Del DEL CTACATTCT CTACATTCT - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 CTACATTCT CTACATTCT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 GTPBP8 29083 hgsc.bcm.edu 36 3 114194617 114194620 + Frame_Shift_Del DEL TTTT TTTT - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 TTTT TTTT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 MUC4 4585 hgsc.bcm.edu 36 3 196990687 196990734 + In_Frame_Del DEL GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 MUC4 4585 hgsc.bcm.edu 36 3 196999393 196999440 + In_Frame_Del DEL GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 APC 324 hgsc.bcm.edu 36 5 112203546 112203546 + Frame_Shift_Del DEL A A - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 HAVCR2 84868 hgsc.bcm.edu 36 5 156466334 156466334 + Frame_Shift_Del DEL A A - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 RARS 5917 hgsc.bcm.edu 36 5 167853529 167853532 + Frame_Shift_Del DEL TTAC TTAC - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 TTAC TTAC Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 PPP1R10 5514 hgsc.bcm.edu 36 6 30680774 30680774 + Frame_Shift_Del DEL T T - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 SLC22A1 6580 hgsc.bcm.edu 36 6 160480888 160480895 + In_Frame_Del DEL TGGTAAGT TGGTAAGT - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 TGGTAAGT TGGTAAGT Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 GPRIN2 9721 hgsc.bcm.edu 36 10 46419597 46419598 + In_Frame_Ins INS - - ATGAGGGAG novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CASP5 838 hgsc.bcm.edu 36 11 104384897 104384897 + Frame_Shift_Del DEL T T - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 T T Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 DDHD1 80821 hgsc.bcm.edu 36 14 52689230 52689231 + In_Frame_Ins INS - - GCCGCC novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 - - Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 KRTAP4-1 85285 hgsc.bcm.edu 36 17 36594322 36594378 + Frame_Shift_Del DEL CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CCR10 51554 hgsc.bcm.edu 36 17 38085147 38085147 + Frame_Shift_Del DEL A A - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 TMUB2 79089 hgsc.bcm.edu 36 17 39623508 39623508 + Frame_Shift_Del DEL A A - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 A A Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354 CHD6 84181 hgsc.bcm.edu 36 20 39466808 39466808 + Frame_Shift_Del DEL C C - novel unknown TCGA-DM-A28E-01A-11D-A16V-10 TCGA-DM-A28E-10A-01D-A16V-10 C C Unknown Unknown Somatic Phase_I Capture Illumina HiSeq c06ae2fa-8943-4b53-b8bd-002787b4534c a26c1fdf-e5b2-430c-b059-c1da7d177354