writing sdrf to GBM.merger.sdrf.txt

------------------------------------------------------------------
2016-02-12 17:52:09.102836
. ['/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/GBM/22229031/infile1.input.tsv']

Make a softlink......

Flag: True.
Processing input file to make a softlink...: /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/GBM/22229031/infile1.input.tsv

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-02-0003-01.wig.txt
('', None)
0
c03dadb8b79a757c1cda6b1915e8540c
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-02-0033-01.wig.txt
('', None)
0
dcc4ef036654d6e34aab054944677816
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-02-0047-01.wig.txt
('', None)
0
57d35581635a3f1996189df8dbdbae37
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-02-0055-01.wig.txt
('', None)
0
76cb305261ef9bfc3131c1a8252d48af
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-02-2470-01.wig.txt
('', None)
0
a82a88312ddb642a7d9897483b9d2b85
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-02-2483-01.wig.txt
('', None)
0
976cd038f865819cc37856ff7d8f4fd4
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-02-2485-01.wig.txt
('', None)
0
93835e761f5123338dde4d57189359d0
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-02-2486-01.wig.txt
('', None)
0
25f63b0fc67cbff262aab6dfb2b6d80b
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0119-01.wig.txt
('', None)
0
14d7cd95c1f44c375641fba381964f9c
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0122-01.wig.txt
('', None)
0
467dbcdb1b62d4a8d3b72bfe6fc02811
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0124-01.wig.txt
('', None)
0
ed8199f7540abae5809fcb9993ec5384
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0125-02.wig.txt
('', None)
0
1ab7ac981e470bdbbf7ba9aacc9301cc
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0126-01.wig.txt
('', None)
0
a3ec8b9651298c58851d4b3556292ffd
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0128-01.wig.txt
('', None)
0
9798f2fc3ffab60f11b2ac69484fbb92
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0129-01.wig.txt
('', None)
0
4c4fb53047738a266236f3c92982af5a
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0130-01.wig.txt
('', None)
0
3e32cd198834544460a9d971b83d35a5
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0132-01.wig.txt
('', None)
0
3ca99f5e3f1ddc3a71a708eca8a50fdc
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0137-01.wig.txt
('', None)
0
41d2a4e68b11f885c8cb5c0308fd6bb1
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0139-01.wig.txt
('', None)
0
a5b445d14e81c53978c7accb809bbe4d
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0140-01.wig.txt
('', None)
0
d05c37bd16e369970715e11e8e11a533
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0141-01.wig.txt
('', None)
0
203afce1201b9273e809e9c03309ecb3
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0142-01.wig.txt
('', None)
0
c202e3c6b8016912dec0d2da1ae173d9
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0145-01.wig.txt
('', None)
0
27f03434bd8bb5379ecff10f2dee0adc
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0151-01.wig.txt
('', None)
0
517e526c279f280b8c4461e11f497bf7
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0152-01.wig.txt
('', None)
0
60205f7fa88cc50cb821db6fc1794966
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0154-01.wig.txt
('', None)
0
03e0c166c5cb4a3301620231ed0e8dbd
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0155-01.wig.txt
('', None)
0
26e91a4ab635f3c4edc9ae643c53a006
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0157-01.wig.txt
('', None)
0
36ebaee90d30b3a259780171f21e3c6b
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0158-01.wig.txt
('', None)
0
221357cc4829a45731611e5baf9572e5
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0165-01.wig.txt
('', None)
0
4a141ccfb54a10d6172665a4ed3adb71
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0166-01.wig.txt
('', None)
0
e9a83f24fad4bda2bd5df2ac68847e20
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0167-01.wig.txt
('', None)
0
c1a4e34bddc94f1d76448b1b65fb7fa1
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0168-01.wig.txt
('', None)
0
6b3ca76df3fee305cb908c6f15ca3cfc
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0169-01.wig.txt
('', None)
0
5b0edabaa28faab7469ea2e5e19dce8f
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0171-02.wig.txt
('', None)
0
fd3cc4b98d5025daff347fb873cbfc1b
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0173-01.wig.txt
('', None)
0
0233a3de1c05f5c0b873ce6d6c105d9c
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0174-01.wig.txt
('', None)
0
a4511cdbdad11e491d8326d8335677b0
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0178-01.wig.txt
('', None)
0
75e30913badf1b27949598cf7ce42849
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0184-01.wig.txt
('', None)
0
261c87530c5dff71118cf983f30eb138
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0185-01.wig.txt
('', None)
0
18e95a6058ad7a9cdc60dd8f7268b8a6
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0188-01.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0189-01.wig.txt
('', None)
0
4754a63965040754b3e600612d3bbbca
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0190-02.wig.txt
('', None)
0
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0192-01.wig.txt
('', None)
0
beb9ce9a2dba73b039118460d72d9020
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0195-01.wig.txt
('', None)
0
a352053a557f2a629f4818dbb60411fa
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0209-01.wig.txt
('', None)
0
109b34c2f71e8e6d120bff99eee7dc74
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0210-02.wig.txt
('', None)
0
a118197006f5d020ea93642607d57f64
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0211-02.wig.txt
('', None)
0
487444666ddd3e8961aafeb80b8289a4
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0213-01.wig.txt
('', None)
0
9e6cdae95f07ad0a05b40968cdb0c2b6
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0214-01.wig.txt
('', None)
0
b2d9716353f823d68fb9fd5cec8e9949
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0216-01.wig.txt
('', None)
0
a818e6769b492ff9b5beae4bf88bd765
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0219-01.wig.txt
('', None)
0
a16bee71f9a8e2ad06dfdd469c03088c
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0221-02.wig.txt
('', None)
0
320d9e794ba173f91d570175f66291a4
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0237-01.wig.txt
('', None)
0
4905a18215f58fdb0f08022d72bcb639
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0238-01.wig.txt
('', None)
0
97c901328f5d5ee260ab0177a947f1d9
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0240-01.wig.txt
('', None)
0
0b7b6bcecef8904eab2ce0d810a41df3
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0241-01.wig.txt
('', None)
0
79c107f3c781e1f0485f8b17b761b55a
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0644-01.wig.txt
('', None)
0
34c1e24405cf48299015af4e57e33103
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0645-01.wig.txt
('', None)
0
059bea077801989945689b78da0306e3
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-06-0646-01.wig.txt
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md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-32-4209-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-32-4210-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-32-4211-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-32-4213-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-32-4719-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-32-5222-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-41-2571-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-41-2572-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-41-2573-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-41-2575-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-41-3392-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-41-3393-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-41-3915-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-41-4097-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-41-5651-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-41-6646-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-74-6573-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-74-6575-01.wig.txt
('', None)
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-74-6577-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-74-6578-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-74-6584-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-4925-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-4926-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-4927-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-4928-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-4929-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-4931-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-4932-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-4934-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-4935-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6191-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6192-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6193-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6280-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6282-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6283-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6285-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6286-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6656-01.wig.txt
('', None)
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6657-01.wig.txt
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6660-01.wig.txt
('', None)
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6661-01.wig.txt
('', None)
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6662-01.wig.txt
('', None)
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6663-01.wig.txt
('', None)
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-76-6664-01.wig.txt
('', None)
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-81-5910-01.wig.txt
('', None)
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-81-5911-01.wig.txt
('', None)
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It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq_automated__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq_automated.Level_2.2.0.0/TCGA-87-5896-01.wig.txt
('', None)
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It is not in the dictionary
Make a softlink is done.