Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	pox	qox	isArtifactMode	oxoGCut
NBPF9	400818	broad.mit.edu	37	1	144823878	144823878	+	Missense_Mutation	SNP	A	A	C			TCGA-CR-7391-01A-11D-2012-08	TCGA-CR-7391-10A-01D-2013-08	 	 	 	 	 	 	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	7236609c-34dd-425a-b882-2dff36983f7b	d00e373a-4fb4-42e6-b71e-a61bad73e27e	g.chr1:144823878A>C	uc009wig.1	+	17	1995	c.1919A>C	c.(1918-1920)TAT>TCT	p.Y640S	NBPF9_uc010oxn.1_Intron|NBPF9_uc010oxo.1_Intron|NBPF9_uc010oxr.1_Intron|NBPF9_uc010oxt.1_Intron|NBPF9_uc001ekg.1_Intron|NBPF9_uc001ekk.1_Intron|NBPF10_uc009wir.2_Intron|NBPF9_uc010oyd.1_Intron|NBPF9_uc010oye.1_Missense_Mutation_p.Y441S|NBPF9_uc001eli.3_RNA|NBPF9_uc010oyf.1_Intron|NBPF9_uc010oyg.1_Intron|PDE4DIP_uc001elk.1_Intron|PDE4DIP_uc001ell.1_Intron|PDE4DIP_uc001elm.3_Intron|PDE4DIP_uc001eln.3_Intron|PDE4DIP_uc001elo.2_Intron|NBPF9_uc001elp.2_Missense_Mutation_p.Y300S	NM_001037675	NP_001032764	Q3BBV1	NBPFK_HUMAN	hypothetical protein LOC400818	640	NBPF 4.					cytoplasm					0						TATAGATGTTATTCAACTCCT	0.483		NA											3	75					0	0	0	0
OR14I1	401994	broad.mit.edu	37	1	248844912	248844912	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CR-7391-01A-11D-2012-08	TCGA-CR-7391-10A-01D-2013-08	 	 	 	 	 	 	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	7236609c-34dd-425a-b882-2dff36983f7b	d00e373a-4fb4-42e6-b71e-a61bad73e27e	g.chr1:248844912G>A	uc001ieu.1	-	1	694	c.694C>T	c.(694-696)CGA>TGA	p.R232*		NM_001004734	NP_001004734	A6ND48	O14I1_HUMAN	olfactory receptor, family 14, subfamily I,	232	Cytoplasmic (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity				0						GCTTTTGCTCGACTCTGTCCT	0.493		NA											5	78					0	0	0	0
ANK3	288	broad.mit.edu	37	10	61835630	61835630	+	Missense_Mutation	SNP	A	A	G			TCGA-CR-7391-01A-11D-2012-08	TCGA-CR-7391-10A-01D-2013-08	 	 	 	 	 	 	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	7236609c-34dd-425a-b882-2dff36983f7b	d00e373a-4fb4-42e6-b71e-a61bad73e27e	g.chr10:61835630A>G	uc001jky.2	-	37	5201	c.5009T>C	c.(5008-5010)CTA>CCA	p.L1670P	ANK3_uc001jkw.2_Intron|ANK3_uc009xpa.2_Intron|ANK3_uc001jkx.2_Intron|ANK3_uc010qih.1_Intron|ANK3_uc001jkz.3_Intron|ANK3_uc001jkv.2_Intron|ANK3_uc009xpb.1_Intron	NM_020987	NP_066267	Q12955	ANK3_HUMAN	ankyrin 3 isoform 1	1670	Ser-rich.				establishment of protein localization|signal transduction	basolateral plasma membrane|cytoplasm|cytoskeleton	protein binding			skin(9)|ovary(6)|pancreas(2)|central_nervous_system(2)	19						TGAAGATATTAGCGGTGCTGC	0.388		NA											3	84					0	0	0	0
SERPING1	710	broad.mit.edu	37	11	57382046	57382046	+	Missense_Mutation	SNP	A	A	G			TCGA-CR-7391-01A-11D-2012-08	TCGA-CR-7391-10A-01D-2013-08	 	 	 	 	 	 	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	7236609c-34dd-425a-b882-2dff36983f7b	d00e373a-4fb4-42e6-b71e-a61bad73e27e	g.chr11:57382046A>G	uc001nkp.1	+	8	1686	c.1495A>G	c.(1495-1497)AGG>GGG	p.R499G	SERPING1_uc001nkq.1_Missense_Mutation_p.R462G|SERPING1_uc010rju.1_Missense_Mutation_p.R447G|SERPING1_uc010rjv.1_Missense_Mutation_p.R504G|SERPING1_uc001nkr.1_Missense_Mutation_p.R499G|SERPING1_uc009ymi.1_Missense_Mutation_p.R508G|SERPING1_uc009ymj.1_3'UTR|SERPING1_uc001nks.1_Missense_Mutation_p.R190G	NM_000062	NP_000053	P05155	IC1_HUMAN	serpin peptidase inhibitor, clade G, member 1	499					blood circulation|blood coagulation, intrinsic pathway|complement activation, classical pathway|innate immune response|negative regulation of complement activation, lectin pathway|platelet activation|platelet degranulation	extracellular space|platelet alpha granule lumen	protein binding|serine-type endopeptidase inhibitor activity			central_nervous_system(1)	1						ATATGACCCCAGGGCCTGAGA	0.622		NA							Hereditary_Angioedema				3	31					0	0	0	0
GPR109B	8843	broad.mit.edu	37	12	123200861	123200861	+	Missense_Mutation	SNP	A	A	G			TCGA-CR-7391-01A-11D-2012-08	TCGA-CR-7391-10A-01D-2013-08	 	 	 	 	 	 	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	7236609c-34dd-425a-b882-2dff36983f7b	d00e373a-4fb4-42e6-b71e-a61bad73e27e	g.chr12:123200861A>G	uc001ucy.3	-	1	579	c.424T>C	c.(424-426)TGG>CGG	p.W142R	GPR81_uc001ucw.1_Intron	NM_006018	NP_006009	P49019	HCAR3_HUMAN	G protein-coupled receptor 109B	142	Cytoplasmic (Potential).					integral to plasma membrane	purinergic nucleotide receptor activity, G-protein coupled			ovary(1)|skin(1)	2	all_neural(191;0.0837)|Medulloblastoma(191;0.163)			OV - Ovarian serous cystadenocarcinoma(86;2.12e-05)|Epithelial(86;3.19e-05)|BRCA - Breast invasive adenocarcinoma(302;0.196)	Mepenzolate(DB04843)|Niacin(DB00627)	GCTGCTGTCCAATTGGAGATC	0.542		NA											3	77					0	0	0	0
ATAD5	79915	broad.mit.edu	37	17	29162940	29162940	+	Missense_Mutation	SNP	C	C	G			TCGA-CR-7391-01A-11D-2012-08	TCGA-CR-7391-10A-01D-2013-08	 	 	 	 	 	 	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	7236609c-34dd-425a-b882-2dff36983f7b	d00e373a-4fb4-42e6-b71e-a61bad73e27e	g.chr17:29162940C>G	uc002hfs.1	+	2	2187	c.1841C>G	c.(1840-1842)TCT>TGT	p.S614C	ATAD5_uc002hft.1_Missense_Mutation_p.S511C	NM_024857	NP_079133	Q96QE3	ATAD5_HUMAN	ATPase family, AAA domain containing 5	614					response to DNA damage stimulus	nucleus	ATP binding|nucleoside-triphosphatase activity			ovary(3)	3		all_hematologic(16;0.0202)|Acute lymphoblastic leukemia(14;0.0238)|Myeloproliferative disorder(56;0.0393)				GGTATTGATTCTGACGATGTA	0.393		NA											6	64					0	0	0	0
RANBP2	5903	broad.mit.edu	37	2	109352601	109352601	+	Silent	SNP	T	T	C			TCGA-CR-7391-01A-11D-2012-08	TCGA-CR-7391-10A-01D-2013-08	 	 	 	 	 	 	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	7236609c-34dd-425a-b882-2dff36983f7b	d00e373a-4fb4-42e6-b71e-a61bad73e27e	g.chr2:109352601T>C	uc002tem.3	+	6	804	c.678T>C	c.(676-678)AGT>AGC	p.S226S		NM_006267	NP_006258	P49792	RBP2_HUMAN	RAN binding protein 2	226					carbohydrate metabolic process|glucose transport|mitotic prometaphase|mRNA transport|protein folding|protein import into nucleus|regulation of glucose transport|transmembrane transport|viral reproduction	cytosol|nuclear pore	peptidyl-prolyl cis-trans isomerase activity|Ran GTPase binding|zinc ion binding		RANBP2/ALK(16)	soft_tissue(16)|lung(1)|pancreas(1)	18						CTGATAAAAGTGACTGGCGAG	0.368		NA											7	269					0	0	0	0
PTPRT	11122	broad.mit.edu	37	20	40727119	40727119	+	Missense_Mutation	SNP	A	A	G			TCGA-CR-7391-01A-11D-2012-08	TCGA-CR-7391-10A-01D-2013-08	 	 	 	 	 	 	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	7236609c-34dd-425a-b882-2dff36983f7b	d00e373a-4fb4-42e6-b71e-a61bad73e27e	g.chr20:40727119A>G	uc002xkg.2	-	27	3972	c.3788T>C	c.(3787-3789)CTG>CCG	p.L1263P	PTPRT_uc010ggj.2_Missense_Mutation_p.L1282P|PTPRT_uc010ggi.2_Missense_Mutation_p.L466P	NM_007050	NP_008981	O14522	PTPRT_HUMAN	protein tyrosine phosphatase, receptor type, T	1263	Cytoplasmic (Potential).|Tyrosine-protein phosphatase 2.				homophilic cell adhesion|transmembrane receptor protein tyrosine kinase signaling pathway	cell surface|integral to membrane|plasma membrane	alpha-catenin binding|beta-catenin binding|cadherin binding|delta-catenin binding|gamma-catenin binding|protein tyrosine phosphatase activity|receptor activity	p.K1263K(1)		skin(8)|ovary(7)|lung(5)	20		Myeloproliferative disorder(115;0.00452)|Lung NSC(126;0.0573)|all_lung(126;0.0783)				ATCGAACACCAGCCTCCAGAA	0.592		NA											3	67					0	0	0	0
ECE2	9718	broad.mit.edu	37	3	184009925	184009925	+	Missense_Mutation	SNP	C	C	T			TCGA-CR-7391-01A-11D-2012-08	TCGA-CR-7391-10A-01D-2013-08	 	 	 	 	 	 	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	7236609c-34dd-425a-b882-2dff36983f7b	d00e373a-4fb4-42e6-b71e-a61bad73e27e	g.chr3:184009925C>T	uc003fni.3	+	19	2589	c.2551C>T	c.(2551-2553)CGC>TGC	p.R851C	ECE2_uc003fnl.3_Missense_Mutation_p.R779C|ECE2_uc003fnm.3_Missense_Mutation_p.R733C|ECE2_uc003fnk.3_Missense_Mutation_p.R704C	NM_014693	NP_055508	O60344	ECE2_HUMAN	endothelin converting enzyme 2 isoform A	851	Lumenal (Potential).|Endothelin-converting enzyme 2 region.				brain development|cardioblast differentiation|cell-cell signaling|peptide hormone processing	cytoplasmic vesicle membrane|Golgi membrane|integral to membrane	metal ion binding|metalloendopeptidase activity|methyltransferase activity			ovary(2)|skin(2)	4	all_cancers(143;1.39e-10)|Ovarian(172;0.0339)		Epithelial(37;8.28e-34)|OV - Ovarian serous cystadenocarcinoma(80;2.72e-22)			TGCCCGCTTCCGCGTGCTGGG	0.677		NA											8	61					0	0	0	0
TEX15	56154	broad.mit.edu	37	8	30701885	30701885	+	Missense_Mutation	SNP	T	T	A			TCGA-CR-7391-01A-11D-2012-08	TCGA-CR-7391-10A-01D-2013-08	 	 	 	 	 	 	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	7236609c-34dd-425a-b882-2dff36983f7b	d00e373a-4fb4-42e6-b71e-a61bad73e27e	g.chr8:30701885T>A	uc003xil.2	-	1	4649	c.4649A>T	c.(4648-4650)GAC>GTC	p.D1550V		NM_031271	NP_112561	Q9BXT5	TEX15_HUMAN	testis expressed 15	1550										ovary(3)|upper_aerodigestive_tract(2)|skin(2)	7				KIRC - Kidney renal clear cell carcinoma(542;0.0918)|Kidney(114;0.111)		AGACTGCGAGTCTTTACTAAC	0.383		NA											8	126					0	0	0	0
EPPK1	83481	broad.mit.edu	37	8	144946714	144946714	+	Silent	SNP	G	G	A			TCGA-CR-7391-01A-11D-2012-08	TCGA-CR-7391-10A-01D-2013-08	 	 	 	 	 	 	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	7236609c-34dd-425a-b882-2dff36983f7b	d00e373a-4fb4-42e6-b71e-a61bad73e27e	g.chr8:144946714G>A	uc003zaa.1	-	1	721	c.708C>T	c.(706-708)CGC>CGT	p.R236R		NM_031308	NP_112598	P58107	EPIPL_HUMAN	epiplakin 1	236						cytoplasm|cytoskeleton	protein binding|structural molecule activity			pancreas(1)|skin(1)	2	all_cancers(97;1.42e-10)|all_epithelial(106;1.99e-09)|Lung NSC(106;0.000126)|all_lung(105;0.000354)|Ovarian(258;0.0173)|Acute lymphoblastic leukemia(118;0.155)		OV - Ovarian serous cystadenocarcinoma(54;2.46e-41)|Epithelial(56;2.88e-40)|all cancers(56;1.82e-35)|Colorectal(110;0.055)|BRCA - Breast invasive adenocarcinoma(115;0.105)			CGCCCATGGAGCGGAAGGTGA	0.682		NA											3	15					0	0	0	0
MORC4	79710	broad.mit.edu	37	X	106186359	106186359	+	Missense_Mutation	SNP	G	G	C			TCGA-CR-7391-01A-11D-2012-08	TCGA-CR-7391-10A-01D-2013-08	 	 	 	 	 	 	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	7236609c-34dd-425a-b882-2dff36983f7b	d00e373a-4fb4-42e6-b71e-a61bad73e27e	g.chrX:106186359G>C	uc004emu.3	-	15	2005	c.1762C>G	c.(1762-1764)CTA>GTA	p.L588V	MORC4_uc004emp.3_Intron|MORC4_uc004emv.3_Missense_Mutation_p.L588V|MORC4_uc004emw.3_Missense_Mutation_p.L336V	NM_024657	NP_078933	Q8TE76	MORC4_HUMAN	zinc finger, CW type with coiled-coil domain 2	588							ATP binding|zinc ion binding			ovary(1)	1						GAATAATCTAGAGAAGGTGTT	0.453		NA											8	154					0	0	0	0
C8orf58	541565	broad.mit.edu	37	8	22459568	22459570	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-CR-7391-01A-11D-2012-08	TCGA-CR-7391-10A-01D-2013-08	 	 	 	 	 	 	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	7236609c-34dd-425a-b882-2dff36983f7b	d00e373a-4fb4-42e6-b71e-a61bad73e27e	g.chr8:22459568_22459570delGCT	uc003xce.2	+	4	853_855	c.741_743delGCT	c.(739-744)GAGCTG>GAG	p.L249del	C8orf58_uc011kzl.1_In_Frame_Del_p.L249del|C8orf58_uc003xcf.2_In_Frame_Del_p.L249del|KIAA1967_uc003xch.2_5'Flank|KIAA1967_uc003xci.2_5'Flank	NM_001013842	NP_001013864	Q8NAV2	CH058_HUMAN	hypothetical protein LOC541565	249										skin(1)	1		Prostate(55;0.0421)|Breast(100;0.102)|all_epithelial(46;0.142)		BRCA - Breast invasive adenocarcinoma(99;0.00563)|Colorectal(74;0.0145)|COAD - Colon adenocarcinoma(73;0.0608)		GGCCATGGGAGCTGCTAAGCCAG	0.64		NA											6	5	---	---	---	---	NA	NA	NA	NA