Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID Tumor_Sample_UUID Matched_Norm_Sample_UUID KIAA1324 57535 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 109731772 109731772 + Missense_Mutation SNP C C T rs143784237 TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef EHBP1L1 254102 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 65350193 65350193 + Missense_Mutation SNP G G T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef SLC9C2 284525 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 173506159 173506159 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef IL28RA 163702 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 24484160 24484160 + Missense_Mutation SNP C C A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef FAM98B 283742 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 38773557 38773557 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef ITGAM 3684 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 31283282 31283282 + Missense_Mutation SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef ANKRD11 29123 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 16 89349348 89349348 + Missense_Mutation SNP A A T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef CDC27 996 hgsc.bcm.edu 37 17 45232055 45232055 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef POLR2A 5430 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 7400726 7400726 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef TP53 7157 broad.mit.edu;hgsc.bcm.edu 37 17 7578190 7578190 + Missense_Mutation SNP T T C rs121912666 alternate_allele TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef TP53 7157 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 7578280 7578280 + Missense_Mutation SNP G G A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef PIAS2 9063 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 18 44409771 44409771 + Missense_Mutation SNP T T A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef NPHS1 4868 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 19 36340211 36340211 + Missense_Mutation SNP C C T rs149649169 TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef PRKCG 5582 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 19 54394940 54394940 + Missense_Mutation SNP G G A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef KIAA1755 85449 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 20 36859706 36859706 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef HECW2 57520 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 2 197106878 197106878 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef TMEM184B 25829 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 22 38621520 38621520 + Missense_Mutation SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef SORBS2 8470 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 4 186560084 186560084 + Missense_Mutation SNP G G A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef FAT1 2195 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 4 187527260 187527260 + Silent SNP G G T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef PRDM8 56978 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 4 81124587 81124587 + Missense_Mutation SNP G G C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef SYNE1 23345 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 6 152652931 152652931 + Missense_Mutation SNP C C G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef KCNS2 3788 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 8 99440360 99440360 + Silent SNP G G A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef OR8B4 283162 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 11 124294671 124294671 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef CLPB 81570 hgsc.bcm.edu;bcgsc.ca 37 11 72028203 72028203 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef ATF7IP 55729 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 12 14589046 14589046 + Missense_Mutation SNP T T G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef TMEM61 199964 hgsc.bcm.edu;mdanderson.org 37 1 55457726 55457726 + Missense_Mutation SNP G G T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef AGBL1 123624 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 15 86808005 86808005 + Missense_Mutation SNP G G A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef CELSR3 1951 hgsc.bcm.edu;mdanderson.org 37 3 48682486 48682486 + Missense_Mutation SNP C C A rs147124288 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef AGL 178 broad.mit.edu 37 1 100353594 100353594 + Silent SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef SPAG17 200162 broad.mit.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 1 118535252 118535252 + Missense_Mutation SNP G G A rs147490539 TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef OR2T3 343173 broad.mit.edu 37 1 248637594 248637594 + Missense_Mutation SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef KIF5B 3799 broad.mit.edu;mdanderson.org;bcgsc.ca 37 10 32321694 32321694 + Missense_Mutation SNP T T A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef RRP12 23223 broad.mit.edu 37 10 99130534 99130534 + Missense_Mutation SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef MKI67 4288 broad.mit.edu 37 10 129899864 129899864 + Silent SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef OR52D1 390066 broad.mit.edu;mdanderson.org 37 11 5510050 5510050 + Silent SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef OR56A3 390083 broad.mit.edu 37 11 5969446 5969446 + Silent SNP C C A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef KCNJ11 3767 broad.mit.edu 37 11 17408682 17408682 + Silent SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef MPPED2 744 broad.mit.edu 37 11 30601906 30601906 + Silent SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef ATM 472 broad.mit.edu 37 11 108216609 108216609 + Missense_Mutation SNP C C T rs141534716 TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef OR8D4 338662 broad.mit.edu;mdanderson.org;bcgsc.ca 37 11 123777314 123777314 + Missense_Mutation SNP T T A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef VWA5A 4013 broad.mit.edu 37 11 124005629 124005629 + Missense_Mutation SNP G G A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef FOXJ2 55810 broad.mit.edu;mdanderson.org;bcgsc.ca 37 12 8196571 8196571 + Missense_Mutation SNP G G C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef OR10A7 121364 broad.mit.edu 37 12 55615316 55615316 + Missense_Mutation SNP G G A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef CCDC64 92558 broad.mit.edu 37 12 120510407 120510407 + Silent SNP G G A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef POLR1D 51082 broad.mit.edu;mdanderson.org 37 13 28197257 28197257 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef NEK5 341676 broad.mit.edu 37 13 52686431 52686431 + Silent SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef GNPNAT1 64841 broad.mit.edu 37 14 53250171 53250172 + Frame_Shift_Del DEL TC TC - novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 TC TC . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef AHSA1 10598 broad.mit.edu 37 14 77926107 77926111 + Frame_Shift_Del DEL CTTAT CTTAT - novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 CTTAT CTTAT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef GOLGA6L6 727832 broad.mit.edu 37 15 20740084 20740084 + Missense_Mutation SNP G G C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef OTUD7A 161725 broad.mit.edu 37 15 31779681 31779681 + Silent SNP G G A rs200079505 TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef CASC5 57082 broad.mit.edu 37 15 40943724 40943724 + Missense_Mutation SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef DCTPP1 79077 broad.mit.edu 37 16 30435593 30435593 + Silent SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef PTRH2 51651 broad.mit.edu;mdanderson.org 37 17 57775085 57775085 + Silent SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef DNAI2 64446 broad.mit.edu 37 17 72306262 72306262 + Missense_Mutation SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef RCN3 57333 broad.mit.edu 37 19 50031830 50031830 + Frame_Shift_Del DEL T T - novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef LILRA4 23547 broad.mit.edu 37 19 54848817 54848817 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef NLRP8 126205 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 56466067 56466067 + Missense_Mutation SNP G G A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef LPIN1 23175 broad.mit.edu 37 2 11922578 11922578 + Silent SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef CCDC88A 55704 broad.mit.edu 37 2 55544911 55544911 + Missense_Mutation SNP G G T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef FSIP2 401024 broad.mit.edu;ucsc.edu;mdanderson.org 37 2 186689203 186689203 + Silent SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef SLC6A6 6533 broad.mit.edu;bcgsc.ca 37 3 14513818 14513818 + Missense_Mutation SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef SCN10A 6336 broad.mit.edu;mdanderson.org 37 3 38739266 38739266 + Silent SNP G G A rs111535651 byfrequency TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef LYZL4 131375 broad.mit.edu 37 3 42438812 42438812 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef CCDC80 151887 broad.mit.edu 37 3 112357042 112357042 + Missense_Mutation SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef B3GALNT1 8706 broad.mit.edu 37 3 160804293 160804293 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef GABRA4 2557 broad.mit.edu;mdanderson.org 37 4 46976325 46976325 + Silent SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef PPAT 5471 broad.mit.edu;mdanderson.org 37 4 57265347 57265347 + Missense_Mutation SNP C C G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef BBS12 166379 broad.mit.edu 37 4 123663959 123663959 + Silent SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef SDHAP3 728609 broad.mit.edu 37 5 1589396 1589396 + RNA SNP A A T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef PCSK1 5122 broad.mit.edu 37 5 95746664 95746664 + Silent SNP G G A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef FBXL17 64839 broad.mit.edu 37 5 107700539 107700539 + Missense_Mutation SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef PCDHB9 56127 broad.mit.edu;mdanderson.org 37 5 140569001 140569001 + Missense_Mutation SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef VN1R10P 387316 broad.mit.edu 37 6 27293740 27293740 + RNA DEL A A - novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef FRK 2444 broad.mit.edu 37 6 116325094 116325094 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef PCLO 27445 broad.mit.edu 37 7 82585926 82585926 + Missense_Mutation SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef MET 4233 broad.mit.edu 37 7 116411695 116411695 + Silent SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef UBR5 51366 broad.mit.edu 37 8 103289349 103289349 + Frame_Shift_Del DEL T T - novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef OXR1 55074 broad.mit.edu 37 8 107715150 107715150 + Missense_Mutation SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef ST3GAL1 6482 broad.mit.edu;mdanderson.org;bcgsc.ca 37 8 134474162 134474162 + Missense_Mutation SNP T T G rs146292003 TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef SETX 23064 broad.mit.edu;mdanderson.org 37 9 135203956 135203956 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef ARHGAP36 158763 broad.mit.edu;mdanderson.org 37 X 130219620 130219620 + Silent SNP C C A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef ARHGAP36 158763 broad.mit.edu 37 X 130219622 130219622 + Missense_Mutation SNP G G T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef MCF2 4168 broad.mit.edu;mdanderson.org 37 X 138698453 138698453 + Silent SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef SLC6A8 6535 broad.mit.edu 37 X 152956889 152956889 + Silent SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef DNHD1 144132 broad.mit.edu 37 11 6566233 6566234 + Frame_Shift_Ins INS - - C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef TMEM86A 144110 broad.mit.edu 37 11 18723333 18723334 + Frame_Shift_Ins INS - - G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef GPRIN1 114787 ucsc.edu 37 5 176026122 176026122 + Silent SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef GRAMD1C 54762 ucsc.edu 37 3 113594422 113594422 + Silent SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef MIS18A 54069 ucsc.edu;bcgsc.ca 37 21 33642787 33642787 + Missense_Mutation SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef MOV10 4343 ucsc.edu 37 1 113241049 113241049 + Silent SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef NTSR1 4923 ucsc.edu 37 20 61340870 61340870 + Missense_Mutation SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef ZZEF1 23140 ucsc.edu;bcgsc.ca 37 17 3981271 3981271 + Nonsense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef ANKRD20A3 441425 mdanderson.org 37 9 67938655 67938655 + Missense_Mutation SNP T T C rs199656293 byfrequency TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef BAGE2 85319 mdanderson.org 37 21 11058168 11058168 + Missense_Mutation SNP A A T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef CYP11B1 1584 mdanderson.org 37 8 143957129 143957129 + Silent SNP G G T rs61752786 byfrequency TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef CYP11B1 1584 mdanderson.org 37 8 143957151 143957151 + Silent SNP A A C rs6437 byfrequency TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef DDX11 1663 mdanderson.org 37 12 31247692 31247692 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef FAM86C1 55199 mdanderson.org 37 11 71507083 71507083 + Silent SNP G G A rs34247448 TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef FRG1B 284802 mdanderson.org 37 20 29628282 29628282 + RNA SNP G G A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef GGT1 2678 mdanderson.org 37 22 25023406 25023406 + Missense_Mutation SNP G G A rs201401901 byfrequency TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef IKBIP 121457 mdanderson.org 37 12 99019897 99019897 + Silent SNP C C A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef KRTAP1-1 81851 mdanderson.org 37 17 39197485 39197485 + Silent SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef KRTAP1-1 81851 mdanderson.org 37 17 39197593 39197593 + Silent SNP G G T rs145621540 by1000genomes TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef MUC16 94025 mdanderson.org 37 19 8999462 8999462 + Silent SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef MUC20 200958 mdanderson.org 37 3 195453332 195453332 + Missense_Mutation SNP G G A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef MUC5B 727897 mdanderson.org 37 11 1268402 1268402 + Missense_Mutation SNP G G A novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef OR4A5 81318 mdanderson.org 37 11 51412043 51412043 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef OR5M8 219484 mdanderson.org 37 11 56258310 56258310 + Silent SNP C C T rs150358569 bycluster;byfrequency;by1000genomes TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef TAS2R43 259289 mdanderson.org 37 12 11244435 11244435 + Missense_Mutation SNP T T C rs111525185 byfrequency TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef VCX3A 51481 mdanderson.org 37 X 6451843 6451843 + Silent SNP G G A rs199720302 TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef WIPF3 644150 mdanderson.org 37 7 29923572 29923572 + Silent SNP T T C rs28439342 byfrequency TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef ZNF492 57615 mdanderson.org 37 19 22836805 22836805 + Missense_Mutation SNP G G A rs200144130 TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef CR2 1380 bcgsc.ca 37 1 207644142 207644142 + Missense_Mutation SNP G G A rs183067414 TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef AHSA1 10598 bcgsc.ca 37 14 77926108 77926112 + Frame_Shift_Del DEL CTTAT CTTAT - novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 CTTAT CTTAT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef NUCB1 4924 bcgsc.ca 37 19 49416771 49416771 + Missense_Mutation SNP A A G novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef RASSF2 9770 bcgsc.ca 37 20 4773205 4773205 + Missense_Mutation SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef ATR 545 bcgsc.ca 37 3 142180902 142180902 + Missense_Mutation SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef ZFP62 643836 bcgsc.ca 37 5 180277728 180277728 + Missense_Mutation SNP C C T novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef SORBS3 10174 bcgsc.ca 37 8 22426778 22426778 + Missense_Mutation SNP T T C novel TCGA-KL-8324-01A-11D-2310-10 TCGA-KL-8324-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef 47e52141-87f5-4718-8497-950711774cd8 5831a933-9b5f-4f33-94d8-ba2a844f27ef