Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID Tumor_Sample_UUID Matched_Norm_Sample_UUID GPRIN2 9721 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 10 46998903 46998903 + Missense_Mutation SNP C C T novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 RNF10 9921 hgsc.bcm.edu 37 12 120972755 120972755 + Silent SNP G G A novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 MYCBP2 23077 hgsc.bcm.edu;bcgsc.ca 37 13 77714270 77714270 + Missense_Mutation SNP G G A novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 METTL9 51108 hgsc.bcm.edu 37 16 21611112 21611112 + Missense_Mutation SNP A A T novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 SLC5A10 125206 hgsc.bcm.edu 37 17 18918510 18918511 + In_Frame_Ins INS - - CGGTACGGGGGTGGGGGC novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 TP53 7157 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 7577566 7577566 + Missense_Mutation SNP T T C novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 GAPDHS 26330 hgsc.bcm.edu 37 19 36033313 36033313 + Splice_Site SNP T T C novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 UGT3A1 133688 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 35957478 35957478 + Missense_Mutation SNP A A T novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 IQUB 154865 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 7 123119977 123119977 + Missense_Mutation SNP C C G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 UPP1 7378 broad.mit.edu;hgsc.bcm.edu 37 7 48147910 48147911 + Frame_Shift_Ins INS - - GGCT novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 CXorf49 100130361 hgsc.bcm.edu 37 X 70937235 70937235 + Frame_Shift_Del DEL C C - novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 CXorf49 100130361 hgsc.bcm.edu 37 X 70984038 70984038 + Frame_Shift_Del DEL G G - novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 NMT2 9397 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 10 15172216 15172216 + Missense_Mutation SNP C C T novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 MGA 23269 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 15 42052530 42052530 + Missense_Mutation SNP A A G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 ZNF555 148254 broad.mit.edu;hgsc.bcm.edu 37 19 2853382 2853382 + Missense_Mutation SNP G G A novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 DNAJB2 3300 hgsc.bcm.edu 37 2 220149586 220149586 + Missense_Mutation SNP G G T novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 DNAH14 127602 broad.mit.edu 37 1 225477667 225477667 + Silent SNP T T C novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 HNRNPU 3192 broad.mit.edu 37 1 245022136 245022136 + Silent SNP T T C novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 MUC2 4583 broad.mit.edu 37 11 1092849 1092849 + Frame_Shift_Del DEL G G - novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 KIRREL3 84623 broad.mit.edu 37 11 126396466 126396466 + Missense_Mutation SNP C C T novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 CSNK1A1L 122011 broad.mit.edu 37 13 37678605 37678605 + Silent SNP A A G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 MLH3 27030 broad.mit.edu 37 14 75513814 75513814 + Missense_Mutation SNP T T C novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 AHNAK2 113146 broad.mit.edu 37 14 105420878 105420878 + Missense_Mutation SNP G G T novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 ZNF20 7568 broad.mit.edu 37 19 12244276 12244276 + Missense_Mutation SNP A A G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 CRTC1 23373 broad.mit.edu 37 19 18879483 18879483 + Silent SNP C C T novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 KYNU 8942 broad.mit.edu 37 2 143718278 143718278 + Missense_Mutation SNP T T C novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 PTPRA 5786 broad.mit.edu;bcgsc.ca 37 20 2998555 2998555 + Missense_Mutation SNP A A G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 SYCP2 10388 broad.mit.edu 37 20 58452519 58452519 + Frame_Shift_Del DEL T T - novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 ENTHD1 150350 broad.mit.edu 37 22 40161248 40161248 + Missense_Mutation SNP A A T novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 DAZL 1618 broad.mit.edu 37 3 16638275 16638275 + Silent SNP A A G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 LEKR1 389170 broad.mit.edu 37 3 156745919 156745919 + Missense_Mutation SNP A A G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 HTT 3064 broad.mit.edu 37 4 3234985 3234985 + Silent SNP C C G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 RASGRF2 5924 broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 80504195 80504195 + Missense_Mutation SNP A A G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 EYA1 2138 broad.mit.edu 37 8 72129213 72129213 + Missense_Mutation SNP C C T novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 RC3H2 54542 broad.mit.edu 37 9 125620200 125620200 + Splice_Site SNP A A G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 HAVCR1 26762 ucsc.edu 37 5 156479568 156479568 + Silent SNP C C T rs10068551 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 HERPUD2 64224 ucsc.edu 37 7 35678074 35678074 + Missense_Mutation SNP T T C novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 HNRNPA0 10949 ucsc.edu;bcgsc.ca 37 5 137089608 137089608 + Missense_Mutation SNP A A G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 MYO7A 4647 ucsc.edu 37 11 76895792 76895792 + Missense_Mutation SNP T T G rs12291062 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 NEFH 4744 ucsc.edu;mdanderson.org 37 22 29885594 29885594 + Silent SNP A A T rs79235463 byfrequency TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 PANK3 79646 ucsc.edu 37 5 167988433 167988433 + Missense_Mutation SNP T T A rs77612793 byfrequency TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 PAOX 196743 ucsc.edu;bcgsc.ca 37 10 135193598 135193598 + Missense_Mutation SNP A A G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 TPP2 7174 ucsc.edu 37 13 103288039 103288039 + Missense_Mutation SNP A A G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 ACIN1 22985 mdanderson.org 37 14 23548793 23548793 + Missense_Mutation SNP C C T rs80007670 byfrequency TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 AHNAK2 113146 mdanderson.org 37 14 105411957 105411957 + Silent SNP G G A novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 AHNAK2 113146 mdanderson.org 37 14 105411971 105411971 + Missense_Mutation SNP T T C rs28737397 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 CYP2D6 1565 mdanderson.org 37 22 42523636 42523636 + Missense_Mutation SNP C C A rs3915951 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 DSPP 1834 mdanderson.org 37 4 88536448 88536448 + Silent SNP C C T rs142168734 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 DSPP 1834 mdanderson.org 37 4 88536451 88536451 + Silent SNP C C T rs141946550 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 DSPP 1834 mdanderson.org 37 4 88536457 88536457 + Silent SNP T T C rs142031576 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 DSPP 1834 mdanderson.org 37 4 88536460 88536460 + Silent SNP C C T rs199691318 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 EP400 57634 mdanderson.org 37 12 132547141 132547141 + Silent SNP G G A novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 FAM71E2 284418 mdanderson.org 37 19 55869903 55869903 + Missense_Mutation SNP T T G rs28712579 alternate_allele TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 FLVCR2 55640 mdanderson.org 37 14 76045417 76045418 + Missense_Mutation DNP GG GG CA rs143304751 byfrequency TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 GG GG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 HLA-DRB1 3123 mdanderson.org 37 6 32549587 32549587 + Silent SNP T T G rs201597010 byfrequency TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 HSP90AA1 3320 mdanderson.org 37 14 102551272 102551272 + Missense_Mutation SNP C C T novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 KIR2DL4 3805 mdanderson.org 37 19 55324635 55324635 + Silent SNP T T C rs649216 byfrequency TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 KRTAP10-2 386679 mdanderson.org 37 21 45970772 45970772 + Silent SNP A A G rs76021731 byfrequency TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 KRTAP10-2 386679 mdanderson.org 37 21 45970774 45970774 + Missense_Mutation SNP G G A rs76536096 byfrequency TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 KRTAP5-8 57830 mdanderson.org 37 11 71249605 71249605 + Silent SNP C C T novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 LURAP1L 286343 mdanderson.org 37 9 12775889 12775889 + Missense_Mutation SNP A A G rs3750501 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 MTX1 4580 mdanderson.org 37 1 155178782 155178782 + Missense_Mutation SNP A A T rs760077 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 MUC16 94025 mdanderson.org 37 19 9005616 9005616 + Missense_Mutation SNP G G T rs78831402 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 MUC16 94025 mdanderson.org 37 19 9018508 9018508 + Missense_Mutation SNP T T G rs74488264 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 MUC6 4588 mdanderson.org 37 11 1016606 1016606 + Silent SNP T T C rs148905794 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 NCOA3 8202 mdanderson.org 37 20 46279863 46279863 + Silent SNP G G A rs141008500 byfrequency TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 NRD1 4898 mdanderson.org 37 1 52306079 52306079 + Missense_Mutation SNP T T A rs62648104 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 PRLHR 2834 mdanderson.org 37 10 120353899 120353899 + Silent SNP C C A rs116062593 byfrequency TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 PRSS3 5646 mdanderson.org 37 9 33794840 33794840 + Silent SNP G G A rs10117993 byfrequency TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 RBM23 55147 mdanderson.org 37 14 23371268 23371268 + Silent SNP A A G rs56708790 byfrequency TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 RRP7A 27341 mdanderson.org 37 22 42910760 42910760 + Silent SNP A A G rs77668629 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 FAM171A1 221061 bcgsc.ca 37 10 15254967 15254967 + Missense_Mutation SNP T T C novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 MTA1 9112 bcgsc.ca 37 14 105932850 105932850 + Missense_Mutation SNP T T C novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 FHOD1 29109 bcgsc.ca 37 16 67271285 67271285 + Missense_Mutation SNP T T C novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 TANGO6 79613 bcgsc.ca 37 16 68961955 68961955 + Missense_Mutation SNP A A G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 TCEB3C 162699 bcgsc.ca 37 18 44555147 44555147 + Missense_Mutation SNP T T G rs139717358 byfrequency TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 ZNF814 730051 bcgsc.ca 37 19 58385748 58385748 + Missense_Mutation SNP G G A rs145250945 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 NOBOX 135935 bcgsc.ca 37 7 144096937 144096937 + Missense_Mutation SNP C C T novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 PCMTD1 115294 bcgsc.ca 37 8 52733143 52733143 + Missense_Mutation SNP A A G rs111785933 TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 SYK 6850 bcgsc.ca 37 9 93650875 93650875 + Missense_Mutation SNP A A G novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 UPP1 7378 bcgsc.ca 37 7 48147911 48147912 + Frame_Shift_Ins INS - - GGCT novel TCGA-KN-8423-01A-11D-2310-10 TCGA-KN-8423-11A-01D-2310-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7 07943d6c-20fe-4b85-9c02-3b7eab4069c1 09835591-2837-4694-87b2-df002105d3e7