Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID Tumor_Sample_UUID Matched_Norm_Sample_UUID JAKMIP3 282973 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 10 133955457 133955457 + Missense_Mutation SNP C C T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ATM 472 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 11 108126988 108126988 + Missense_Mutation SNP G G T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 RBM15 64783 broad.mit.edu;hgsc.bcm.edu 37 1 110882695 110882713 + Frame_Shift_Del DEL GGCGGCCAGAGGACGCGCG GGCGGCCAGAGGACGCGCG - novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 GGCGGCCAGAGGACGCGCG GGCGGCCAGAGGACGCGCG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 FCRLA 84824 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 1 161677131 161677131 + Missense_Mutation SNP T T C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 OR6A2 8590 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 11 6816462 6816462 + Missense_Mutation SNP T T G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 COL2A1 1280 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 12 48379322 48379322 + Missense_Mutation SNP G G A novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 EIF5 1983 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 14 103802243 103802243 + Missense_Mutation SNP T T C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ISLR 3671 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 15 74467546 74467546 + Missense_Mutation SNP G G T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 TMIGD1 388364 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 17 28656457 28656457 + Missense_Mutation SNP T T C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 NECAB3 63941 broad.mit.edu;hgsc.bcm.edu 37 20 32258501 32258501 + Frame_Shift_Del DEL C C - novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 PCNA 5111 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 20 5099481 5099481 + Missense_Mutation SNP C C G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 COL3A1 1281 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 2 189873717 189873717 + Missense_Mutation SNP G G A novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ABHD10 55347 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 111710501 111710501 + Missense_Mutation SNP C C A novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 CLASP2 23122 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 3 33686372 33686372 + Missense_Mutation SNP A A T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 SMARCA5 8467 hgsc.bcm.edu 37 4 144442709 144442710 + Frame_Shift_Ins INS - - A novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 CD109 135228 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 6 74520746 74520746 + Missense_Mutation SNP A A C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 HOXA9 3205 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 7 27204514 27204514 + Missense_Mutation SNP T T C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 WNK2 65268 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 9 95991992 95991992 + Silent SNP C C G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 LRRK2 120892 hgsc.bcm.edu 37 12 40707951 40707951 + Missense_Mutation SNP G G A novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ZCCHC8 55596 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 12 122958438 122958438 + Missense_Mutation SNP G G A novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 MED8 112950 broad.mit.edu;hgsc.bcm.edu;bcgsc.ca 37 1 43852260 43852260 + Missense_Mutation SNP C C T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 DAGLB 221955 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 7 6452490 6452490 + Missense_Mutation SNP A A T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ZFAND4 93550 broad.mit.edu 37 10 46122460 46122460 + Missense_Mutation SNP C C A novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 OR1S1 219959 broad.mit.edu;mdanderson.org 37 11 57982414 57982414 + Silent SNP G G A rs111386724 byfrequency TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 PCNXL4 64430 broad.mit.edu;ucsc.edu;bcgsc.ca 37 14 60585201 60585201 + Missense_Mutation SNP T T C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 WASH3P 374666 broad.mit.edu 37 15 102515298 102515298 + RNA SNP C C T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 WASH3P 374666 broad.mit.edu 37 15 102516466 102516466 + RNA SNP C C G rs62635298 byfrequency TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 VASN 114990 broad.mit.edu 37 16 4431910 4431910 + Silent SNP C C T rs200909451 TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 BRCA1 672 broad.mit.edu;mdanderson.org 37 17 41244425 41244425 + Silent SNP T T C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 HEATR6 63897 broad.mit.edu 37 17 58156293 58156293 + Splice_Site SNP G G C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 CPAMD8 27151 broad.mit.edu;ucsc.edu 37 19 17036078 17036078 + Silent SNP A A G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 CILP2 148113 broad.mit.edu 37 19 19649208 19649208 + Frame_Shift_Del DEL T T - novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 RELB 5971 broad.mit.edu;bcgsc.ca 37 19 45537516 45537516 + Missense_Mutation SNP G G C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 SSC5D 284297 broad.mit.edu 37 19 56029435 56029435 + Missense_Mutation SNP A A C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ZNF787 126208 broad.mit.edu 37 19 56599998 56599998 + Frame_Shift_Del DEL C C - novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ANAPC1 64682 broad.mit.edu 37 2 112608394 112608394 + Missense_Mutation SNP T T C rs12466309 bycluster;byfrequency;byhapmap TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 MFNG 4242 broad.mit.edu 37 22 37875491 37875491 + Silent SNP C C T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 BRD1 23774 broad.mit.edu;mdanderson.org 37 22 50216913 50216913 + Silent SNP A A G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 MON1A 84315 broad.mit.edu 37 3 49967246 49967246 + Frame_Shift_Del DEL G G - novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 NAT8L 339983 broad.mit.edu;ucsc.edu;bcgsc.ca 37 4 2065597 2065597 + Missense_Mutation SNP C C T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ZSWIM6 57688 broad.mit.edu 37 5 60822215 60822215 + Frame_Shift_Del DEL A A - novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 NBPF22P 285622 broad.mit.edu 37 5 85581611 85581611 + RNA DEL A A - novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 SLC25A46 91137 broad.mit.edu 37 5 110097244 110097244 + Missense_Mutation SNP G G A novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 DPCR1 135656 broad.mit.edu 37 6 30917845 30917845 + Missense_Mutation SNP C C T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 CAMSAP1 157922 broad.mit.edu 37 9 138715800 138715800 + Frame_Shift_Del DEL T T - novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 STAM 8027 broad.mit.edu 37 10 17756602 17756603 + In_Frame_Ins INS - - CCC novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 SIK2 23235 broad.mit.edu 37 11 111594331 111594332 + Frame_Shift_Ins INS - - C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 RTL1 388015 broad.mit.edu 37 14 101347140 101347141 + Frame_Shift_Ins INS - - C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 SLC28A2 9153 broad.mit.edu 37 15 45556950 45556951 + Frame_Shift_Ins INS - - G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ZNF548 147694 broad.mit.edu 37 19 57911165 57911166 + Frame_Shift_Ins INS - - TT novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 GGT7 2686 broad.mit.edu 37 20 33447370 33447371 + Frame_Shift_Ins INS - - G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 SYNGR1 9145 broad.mit.edu 37 22 39777835 39777836 + Frame_Shift_Ins INS - - C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 CCRL1 51554 broad.mit.edu 37 3 132320028 132320029 + Frame_Shift_Ins INS - - G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 RIPPLY2 134701 broad.mit.edu 37 6 84567032 84567033 + Frame_Shift_Ins INS - - A novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 CBWD6 644019 broad.mit.edu 37 9 69256826 69256827 + Frame_Shift_Ins INS - - C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 C17orf98 388381 ucsc.edu 37 17 36997606 36997606 + Missense_Mutation SNP T T C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 CHAT 1103 ucsc.edu 37 10 50827861 50827861 + Missense_Mutation SNP A A G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 COL11A1 1301 ucsc.edu 37 1 103453264 103453264 + Silent SNP T T C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ZBTB48 3104 ucsc.edu;bcgsc.ca 37 1 6641321 6641321 + Nonsense_Mutation SNP G G T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ALG9 79796 mdanderson.org 37 11 111657129 111657129 + Missense_Mutation SNP C C T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 AQP12A 375318 mdanderson.org 37 2 241631668 241631668 + Silent SNP T T C rs4343462 byfrequency TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 AQP7 364 mdanderson.org 37 9 33385815 33385815 + Missense_Mutation SNP T T C rs62542745 TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ATXN1 6310 mdanderson.org 37 6 16327903 16327903 + Missense_Mutation SNP C C A rs3817753 TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 BDNF-AS 497258 mdanderson.org 37 11 27681197 27681197 + RNA SNP C C T rs77220398 TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 CCDC144NL 339184 mdanderson.org 37 17 20768816 20768816 + Missense_Mutation SNP C C T rs75656883 TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 CDC27 996 mdanderson.org 37 17 45214527 45214527 + Missense_Mutation SNP T T C rs62075618 byfrequency TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 DOCK2 1794 mdanderson.org 37 5 169504743 169504743 + Silent SNP T T C rs1045168 byfrequency TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ETFDH 2110 mdanderson.org 37 4 159601752 159601752 + Silent SNP A A G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 GJA1 2697 mdanderson.org 37 6 121769050 121769050 + Silent SNP T T C rs2227883 TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 GOLGA8F 100132565 mdanderson.org 37 15 28632760 28632760 + RNA SNP G G A novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 GPR112 139378 mdanderson.org 37 X 135431236 135431236 + Missense_Mutation SNP T T C rs5930932 byfrequency TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 KCNA6 3742 mdanderson.org 37 12 4920387 4920387 + Missense_Mutation SNP G G A novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 KRTAP4-9 100132386 mdanderson.org 37 17 39262096 39262096 + Silent SNP C C T rs76327324 byfrequency TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 KRTAP5-10 387273 mdanderson.org 37 11 71276876 71276876 + Silent SNP A A G rs12788123 TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 KRTAP5-2 440021 mdanderson.org 37 11 1619368 1619368 + Missense_Mutation SNP C C T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 KRTAP5-4 387267 mdanderson.org 37 11 1643246 1643246 + Silent SNP A A G rs142004120 by1000genomes TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 MUC16 94025 mdanderson.org 37 19 9065113 9065113 + Missense_Mutation SNP T T C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 MUC4 4585 mdanderson.org 37 3 195505791 195505791 + Silent SNP A A T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 MUC4 4585 mdanderson.org 37 3 195505839 195505839 + Silent SNP A A T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 MUC4 4585 mdanderson.org 37 3 195505849 195505849 + Missense_Mutation SNP G G A novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 MUC4 4585 mdanderson.org 37 3 195509515 195509515 + Missense_Mutation SNP T T A rs28438604 TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 MUC4 4585 mdanderson.org 37 3 195509585 195509585 + Missense_Mutation SNP C C T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 MUC4 4585 mdanderson.org 37 3 195515099 195515099 + Missense_Mutation SNP T T C rs71321848 bycluster TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 MUC6 4588 mdanderson.org 37 11 1018314 1018314 + Missense_Mutation SNP G G A rs200089063 TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 OR7A5 26659 mdanderson.org 37 19 14938184 14938184 + Silent SNP A A G rs200531878 TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 OR7A5 26659 mdanderson.org 37 19 14938248 14938248 + Missense_Mutation SNP T T A rs112284734 byfrequency TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 PAK2 5062 mdanderson.org 37 3 196530013 196530013 + Silent SNP A A G rs73205842 byfrequency TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 PCDHA6 56142 mdanderson.org 37 5 140208909 140208909 + Silent SNP T T C rs664837 byfrequency TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 POM121L1P 25812 mdanderson.org 37 22 22977640 22977640 + RNA SNP G G C rs113599461 byfrequency TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 PRAMEF7 441871 mdanderson.org 37 1 12980074 12980074 + Silent SNP T T A rs61778323 TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 PRB2 653247 mdanderson.org 37 12 11546634 11546634 + Silent SNP G G A rs78796502 TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 RNF145 153830 mdanderson.org 37 5 158603839 158603839 + Missense_Mutation SNP A A G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 TBP 6908 mdanderson.org 37 6 170871052 170871052 + Silent SNP G G A rs112083427 byfrequency TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 TMEM257 9142 mdanderson.org 37 X 144909347 144909347 + Missense_Mutation SNP C C T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 USP11 8237 mdanderson.org 37 X 47092432 47092432 + Missense_Mutation SNP A A G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ZHX1 11244 mdanderson.org 37 8 124267138 124267138 + Missense_Mutation SNP T T C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ZNF468 90333 mdanderson.org 37 19 53352388 53352388 + Silent SNP A A G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 ZNF584 201514 mdanderson.org 37 19 58921398 58921398 + Missense_Mutation SNP A A G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 SZT2 23334 bcgsc.ca 37 1 43908707 43908707 + Missense_Mutation SNP T T C novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 RBM15 64783 bcgsc.ca 37 1 110882696 110882714 + Frame_Shift_Del DEL GGCGGCCAGAGGACGCGCG GGCGGCCAGAGGACGCGCG - novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 GGCGGCCAGAGGACGCGCG GGCGGCCAGAGGACGCGCG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 CYP20A1 57404 bcgsc.ca 37 2 204161576 204161576 + Missense_Mutation SNP A A G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 NECAB3 63941 bcgsc.ca 37 20 32258502 32258502 + Frame_Shift_Del DEL C C - novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 C3orf33 285315 bcgsc.ca 37 3 155485327 155485327 + Missense_Mutation SNP C C T novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 KIAA1244 57221 bcgsc.ca 37 6 138655499 138655499 + Missense_Mutation SNP A A G novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 SMARCA5 8467 bcgsc.ca 37 4 144442710 144442711 + Frame_Shift_Ins INS - - A novel TCGA-KN-8435-01A-11D-2310-10 TCGA-KN-8435-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3 715f59dd-a80f-422d-988c-f73f4b987baf 9cf36c04-1d2a-4e2f-902d-857033d208d3