Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID Tumor_Sample_UUID Matched_Norm_Sample_UUID ZFP106 64397 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 15 42720229 42720229 + Missense_Mutation SNP G G A novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 PLEKHM1 9842 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 17 43523003 43523003 + Silent SNP C C G novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 ENO1 2023 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 1 8923329 8923329 + Missense_Mutation SNP T T A novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 PRKCSH 5589 hgsc.bcm.edu;mdanderson.org 37 19 11558367 11558367 + Silent SNP G G A novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 ZNF793 390927 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 19 38028153 38028153 + Missense_Mutation SNP C C G novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 CCR2 729230 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 3 46399846 46399846 + Missense_Mutation SNP C C A novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 FAM75E1 286234 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 9 90500243 90500243 + Missense_Mutation SNP C C G novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 CXorf23 256643 hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 X 19983778 19983778 + Nonsense_Mutation SNP T T A novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 FBXW7 55294 hgsc.bcm.edu 37 4 153247276 153247276 + Missense_Mutation SNP T T C novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 ATG2A 23130 broad.mit.edu;hgsc.bcm.edu;mdanderson.org 37 11 64664287 64664287 + Silent SNP G G A rs180755321 by1000genomes TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 FOLR2 2350 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 11 71932013 71932013 + Missense_Mutation SNP G G A rs74853303 bycluster;byfrequency;by1000genomes TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 SSTR2 6752 hgsc.bcm.edu 37 17 71166135 71166135 + Missense_Mutation SNP T T C novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 ODF4 146852 hgsc.bcm.edu;bcgsc.ca 37 17 8249105 8249105 + Missense_Mutation SNP A A G novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 FAM131C 348487 broad.mit.edu;mdanderson.org 37 1 16386095 16386095 + Silent SNP G G A novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 SRGAP2 23380 broad.mit.edu 37 1 206516357 206516357 + Frame_Shift_Del DEL A A - novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 IDE 3416 broad.mit.edu 37 10 94223677 94223677 + Missense_Mutation SNP A A G novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 CREBBP 1387 broad.mit.edu 37 16 3817815 3817815 + Silent SNP T T C novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 ZNF233 353355 broad.mit.edu 37 19 44778459 44778459 + Missense_Mutation SNP C C T rs200116301 TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 MBOAT2 129642 broad.mit.edu 37 2 9013240 9013240 + Missense_Mutation SNP A A G novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 NPAS2 4862 broad.mit.edu 37 2 101607324 101607324 + Missense_Mutation SNP C C T rs141762291 TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 ADAM23 8745 broad.mit.edu;bcgsc.ca 37 2 207459582 207459582 + Missense_Mutation SNP A A G novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 EBF4 57593 broad.mit.edu 37 20 2686302 2686302 + Silent SNP C C T novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 MAP1LC3A 84557 broad.mit.edu 37 20 33147203 33147203 + Missense_Mutation SNP C C T novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 TIMD4 91937 broad.mit.edu 37 5 156378731 156378733 + In_Frame_Del DEL GGT GGT - novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 GGT GGT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 SARDH 1757 broad.mit.edu;bcgsc.ca 37 9 136550314 136550314 + Splice_Site SNP C C A novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 CSAG4 100130935 broad.mit.edu 37 X 151896626 151896626 + RNA DEL A A - novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 MUC5B 727897 broad.mit.edu 37 11 1263525 1263526 + Frame_Shift_Ins INS - - G novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 ZNF205 7755 broad.mit.edu 37 16 3169758 3169759 + Frame_Shift_Ins INS - - C novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 C16orf96 342346 broad.mit.edu 37 16 4625753 4625754 + Frame_Shift_Ins INS - - C novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 CNTD2 79935 broad.mit.edu 37 19 40730638 40730639 + Frame_Shift_Ins INS - - C novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 CBWD2 150472 broad.mit.edu 37 2 114201378 114201379 + Frame_Shift_Ins INS - - G novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 FAM184B 27146 broad.mit.edu 37 4 17654576 17654577 + Frame_Shift_Ins INS - - G novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 MAN1B1 11253 broad.mit.edu 37 9 139990718 139990719 + Frame_Shift_Ins INS - - C novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 C7orf50 84310 ucsc.edu;bcgsc.ca 37 7 1049662 1049662 + Missense_Mutation SNP G G A novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 NRSN1 140767 ucsc.edu 37 6 24146152 24146152 + Missense_Mutation SNP T T C novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 OTOP1 133060 ucsc.edu 37 4 4228424 4228425 + Missense_Mutation DNP TT TT CC rs78657691 TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 TT TT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 PTCD2 79810 ucsc.edu 37 5 71638808 71638808 + Missense_Mutation SNP T T C novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 TMEM201 199953 ucsc.edu 37 1 9673104 9673104 + Missense_Mutation SNP T T C novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 VPS37D 155382 ucsc.edu 37 7 73085354 73085354 + Missense_Mutation SNP A A G novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 CCDC74A 90557 mdanderson.org 37 2 132289349 132289349 + Silent SNP A A G rs2258687 bycluster;byfrequency TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 CSDA 8531 mdanderson.org 37 12 10875488 10875488 + Missense_Mutation SNP T T C rs1126501 TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 EPN3 55040 mdanderson.org 37 17 48619290 48619290 + Silent SNP G G A rs112657244 byfrequency TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 GRID2IP 392862 mdanderson.org 37 7 6566322 6566322 + Silent SNP T T G rs2881723 bycluster;byfrequency;by1000genomes TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 HLA-A 3105 mdanderson.org 37 6 29910801 29910801 + Missense_Mutation SNP C C A rs1136692 byfrequency TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 HLA-B 3106 mdanderson.org 37 6 31324595 31324595 + Silent SNP C C G rs144857500 byfrequency TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 HOXC9 3225 mdanderson.org 37 12 54394497 54394497 + Silent SNP C C T rs2241820 byfrequency TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 HS6ST1 9394 mdanderson.org 37 2 129025928 129025928 + Silent SNP G G A rs34162993 TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 HSP90AB1 3326 mdanderson.org 37 6 44221262 44221262 + Missense_Mutation SNP A A G rs201760495 byfrequency TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 LILRB3 11025 mdanderson.org 37 19 54724407 54724407 + Missense_Mutation SNP C C T rs1132608 TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 LILRB3 11025 mdanderson.org 37 19 54724411 54724411 + Silent SNP C C T rs1132607 TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 MAGEC1 9947 mdanderson.org 37 X 140994010 140994010 + Missense_Mutation SNP C C T rs146798989 byfrequency TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 MUC4 4585 mdanderson.org 37 3 195509641 195509641 + Missense_Mutation SNP A A G rs28414759 TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 NPHS2 7827 mdanderson.org 37 1 179544941 179544941 + Missense_Mutation SNP G G A rs74315344 TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 OR1S2 219958 mdanderson.org 37 11 57970980 57970980 + Missense_Mutation SNP A A G rs34249289 bycluster;alternate_allele TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 OR2T33 391195 mdanderson.org 37 1 248436807 248436807 + Missense_Mutation SNP T T A rs74534795 bycluster TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 OR4A16 81327 mdanderson.org 37 11 55111086 55111086 + Missense_Mutation SNP T T A rs78354885 byfrequency TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 OR4A5 81318 mdanderson.org 37 11 51412022 51412022 + Missense_Mutation SNP C C G novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 PRSS3 5646 mdanderson.org 37 9 33796734 33796734 + Missense_Mutation SNP C C A novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 RLIM 51132 mdanderson.org 37 X 73811737 73811737 + Silent SNP T T A rs113198776 TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 RNF39 80352 mdanderson.org 37 6 30043171 30043171 + Silent SNP G G C rs9261304 TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 WDR90 197335 mdanderson.org 37 16 705360 705360 + Missense_Mutation SNP T T C rs3803697 byfrequency TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 CHIT1 1118 bcgsc.ca 37 1 203186950 203186950 + Nonsense_Mutation SNP C C T rs201320385 byfrequency TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 POC1B-GALNT4 100528030 bcgsc.ca 37 12 89918149 89918149 + Missense_Mutation SNP A A G novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 NOB1 28987 bcgsc.ca 37 16 69783533 69783533 + Missense_Mutation SNP C C T novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 MUC4 4585 bcgsc.ca 37 3 195511358 195511358 + Missense_Mutation SNP C C G rs77614482 TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 ROS1 6098 bcgsc.ca 37 6 117718246 117718246 + Missense_Mutation SNP T T C novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 ND1 10625 bcgsc.ca 37 MT 4042 4042 + Missense_Mutation SNP A A G novel TCGA-KO-8405-01A-11D-2310-10 TCGA-KO-8405-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5 6400c324-2c94-477d-acb9-669d4ea46f1e 43634c4d-e2ed-4b39-bac2-474388af50e5