Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID Tumor_Sample_UUID Matched_Norm_Sample_UUID C1orf213 148898 broad.mit.edu;hgsc.bcm.edu 37 1 23696027 23696028 + RNA INS - - T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 HNF1B 6928 broad.mit.edu;hgsc.bcm.edu 37 17 36099508 36099510 + In_Frame_Del DEL TTG TTG - novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 TTG TTG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 DSCAM 1826 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 21 41684190 41684190 + Missense_Mutation SNP G G A novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 NDUFS1 4719 broad.mit.edu;hgsc.bcm.edu;mdanderson.org;bcgsc.ca 37 2 207008833 207008833 + Missense_Mutation SNP C C G rs137994727 alternate_allele TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 NPY2R 4887 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 4 156136035 156136035 + Missense_Mutation SNP T T A novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 KIF2A 3796 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org;bcgsc.ca 37 5 61653554 61653554 + Nonsense_Mutation SNP C C T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 KCNK5 8645 hgsc.bcm.edu 37 6 39159435 39159435 + Nonsense_Mutation SNP C C T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 DST 667 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 6 56480802 56480802 + Missense_Mutation SNP C C T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 RINT1 60561 broad.mit.edu;hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 7 105182935 105182935 + Silent SNP T T C novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 SLCO1B7 338821 hgsc.bcm.edu 37 12 21168673 21168673 + Missense_Mutation SNP C C T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 CDH11 1009 hgsc.bcm.edu 37 16 65006841 65006841 + Silent SNP G G T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 MEF2C 4208 hgsc.bcm.edu 37 5 88025096 88025096 + Silent SNP A A G novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 CLCNKB 1188 broad.mit.edu 37 1 16383402 16383402 + Silent SNP C C T rs6698427 TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 MST1P2 11209 broad.mit.edu 37 1 16975451 16975451 + RNA SNP G G A rs11800295 bycluster;byhapmap TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 ODF2L 57489 broad.mit.edu 37 1 86826142 86826142 + Frame_Shift_Del DEL T T - novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 OR5M9 390162 broad.mit.edu 37 11 56230641 56230641 + Missense_Mutation SNP C C A novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 NUMA1 4926 broad.mit.edu 37 11 71715034 71715034 + Missense_Mutation SNP T T G novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 MYH7 4625 broad.mit.edu;mdanderson.org 37 14 23892897 23892897 + Missense_Mutation SNP A A T rs140244068 alternate_allele TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 SOS2 6655 broad.mit.edu;mdanderson.org 37 14 50626456 50626456 + Silent SNP T T A novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 EXOC3L4 91828 broad.mit.edu;ucsc.edu 37 14 103576543 103576543 + Silent SNP C C T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 HERC2P2 400322 broad.mit.edu 37 15 23283056 23283064 + RNA DEL CCCGCTCTT CCCGCTCTT - novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 CCCGCTCTT CCCGCTCTT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 CHAC1 79094 broad.mit.edu 37 15 41247647 41247647 + Missense_Mutation SNP A A G novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 ACSF3 197322 broad.mit.edu;bcgsc.ca 37 16 89167160 89167160 + Missense_Mutation SNP C C T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 TP53 7157 broad.mit.edu 37 17 7578212 7578212 + Nonsense_Mutation SNP G G A novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 UBTF 7343 broad.mit.edu 37 17 42289365 42289365 + Missense_Mutation SNP T T C novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 AZI1 22994 broad.mit.edu 37 17 79164828 79164828 + Missense_Mutation SNP T T C novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 DLL3 10683 broad.mit.edu 37 19 39994863 39994863 + Missense_Mutation SNP G G A rs139297205 TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 ZNF180 7733 broad.mit.edu 37 19 44980907 44980907 + Silent SNP T T C novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 HADHB 3032 broad.mit.edu;bcgsc.ca 37 2 26502036 26502036 + Missense_Mutation SNP A A G novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 ANKRD30BL 554226 broad.mit.edu 37 2 132919171 132919171 + RNA SNP A A G rs199695856 TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 ANKRD30BL 554226 broad.mit.edu 37 2 132919192 132919192 + RNA SNP G G A rs111295191 TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 SRC 6714 broad.mit.edu;bcgsc.ca 37 20 36022638 36022638 + Missense_Mutation SNP C C T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 HMGXB4 10042 broad.mit.edu 37 22 35661575 35661576 + Frame_Shift_Del DEL AG AG - novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 AG AG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 GPD1L 23171 broad.mit.edu 37 3 32169635 32169643 + In_Frame_Del DEL AAGATGTGG AAGATGTGG - novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 AAGATGTGG AAGATGTGG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 WDR6 11180 broad.mit.edu 37 3 49051528 49051528 + Missense_Mutation SNP T T G novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 CCNA2 890 broad.mit.edu 37 4 122743634 122743634 + Silent SNP A A G novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 DMXL1 1657 broad.mit.edu 37 5 118525451 118525451 + Missense_Mutation SNP C C T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 DPY19L2P1 554236 broad.mit.edu 37 7 35161155 35161155 + RNA SNP G G A novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 CTAGE6 340307 broad.mit.edu 37 7 143453697 143453697 + Missense_Mutation SNP A A G novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 SMARCA2 6595 broad.mit.edu 37 9 2039815 2039815 + Silent SNP G G A novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 C8G 733 broad.mit.edu 37 9 139839860 139839860 + Missense_Mutation SNP G G T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 WAS 7454 broad.mit.edu;mdanderson.org;bcgsc.ca 37 X 48545247 48545247 + Missense_Mutation SNP C C T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 DYRK1B 9149 broad.mit.edu 37 19 40321175 40321176 + Frame_Shift_Ins INS - - C novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 GCNT2 2651 ucsc.edu 37 6 10626704 10626704 + Missense_Mutation SNP T T G rs200336999 TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 IDE 3416 ucsc.edu 37 10 94291641 94291641 + Silent SNP A A G novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 KDM2B 84678 ucsc.edu 37 12 121891003 121891003 + Missense_Mutation SNP A A G novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 RAI1 10743 ucsc.edu 37 17 17712752 17712752 + Missense_Mutation SNP A A G novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 ZACN 353174 ucsc.edu 37 17 74075997 74075997 + Missense_Mutation SNP A A G novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 ANKRD20A5P 440482 mdanderson.org 37 18 14183978 14183978 + RNA SNP T T C rs77403707 byfrequency TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 ANKRD20A5P 440482 mdanderson.org 37 18 14184023 14184023 + RNA SNP T T G rs62085009 TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 ARHGEF40 55701 mdanderson.org 37 14 21549893 21549893 + Missense_Mutation SNP G G C rs7143633 byfrequency TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 CNTN5 53942 mdanderson.org 37 11 99690461 99690461 + Missense_Mutation SNP A A G rs10893933 TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 ESRRA 2101 mdanderson.org 37 11 64083221 64083221 + Missense_Mutation SNP G G C rs200986301 TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 FAM47C 442444 mdanderson.org 37 X 37028209 37028209 + Missense_Mutation SNP G G A novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 INSL3 3640 mdanderson.org 37 19 17932289 17932289 + Silent SNP C C T rs2286663 byfrequency TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 MED17 9440 mdanderson.org 37 11 93517886 93517886 + Missense_Mutation SNP G G C rs2848477 byfrequency TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 MIR663B 100313824 mdanderson.org 37 2 133014602 133014602 + RNA SNP G G C rs75245503 byfrequency TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 MIR663B 100313824 mdanderson.org 37 2 133014612 133014612 + RNA SNP A A C rs74853538 byfrequency TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 MUC4 4585 mdanderson.org 37 3 195508931 195508931 + Missense_Mutation SNP G G A novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 MUC6 4588 mdanderson.org 37 11 1017654 1017654 + Missense_Mutation SNP G G A novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 MUC6 4588 mdanderson.org 37 11 1017669 1017669 + Missense_Mutation SNP G G A novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 OR2T33 391195 mdanderson.org 37 1 248436932 248436932 + Missense_Mutation SNP C C T rs200639224 TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 SLC35G6 643664 mdanderson.org 37 17 7386090 7386091 + Missense_Mutation DNP GC GC AA novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 GC GC . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 SLC35G6 643664 mdanderson.org 37 17 7386114 7386114 + Missense_Mutation SNP A A G rs199996601 byfrequency TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 SLC9B1 150159 mdanderson.org 37 4 103826788 103826788 + Silent SNP T T G rs75429882 TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 SOS2 6655 mdanderson.org;bcgsc.ca 37 14 50626363 50626363 + Missense_Mutation SNP A A T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 TBC1D29 26083 mdanderson.org 37 17 28887667 28887667 + Silent SNP T T C rs78888987 byfrequency TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 TREML2 79865 mdanderson.org 37 6 41166022 41166022 + Silent SNP A A G rs139267947 byfrequency TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 TREML2 79865 mdanderson.org 37 6 41166025 41166025 + Silent SNP G G A rs113267424 byfrequency TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 USP48 84196 mdanderson.org 37 1 22109370 22109370 + Silent SNP G G A rs10917042 byfrequency TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 ZFHX3 463 mdanderson.org 37 16 72991715 72991715 + Missense_Mutation SNP A A G rs4788682 byfrequency TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 NBPF10 100132406 bcgsc.ca 37 1 145323656 145323656 + Missense_Mutation SNP A A T rs75252120 byfrequency TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 FBXO18 84893 bcgsc.ca 37 10 5960320 5960320 + Missense_Mutation SNP T T C novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 MUC2 4583 bcgsc.ca 37 11 1093364 1093364 + Missense_Mutation SNP C C G rs113138128 TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 HNF1B 6928 bcgsc.ca 37 17 36099509 36099511 + In_Frame_Del DEL TTG TTG - novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 TTG TTG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 GPD1L 23171 bcgsc.ca 37 3 32169636 32169644 + In_Frame_Del DEL AAGATGTGG AAGATGTGG - novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 AAGATGTGG AAGATGTGG . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 HLA-A 3105 bcgsc.ca 37 6 29911261 29911261 + Missense_Mutation SNP C C G rs3129018 byfrequency TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 COX1 5742 bcgsc.ca 37 MT 6381 6381 + Missense_Mutation SNP G G A novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 ZDHHC9 51114 bcgsc.ca 37 X 128945410 128945410 + Missense_Mutation SNP C C T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 C1orf213 148898 bcgsc.ca 37 1 23696028 23696029 + RNA INS - - T novel TCGA-KN-8431-01A-11D-2310-10 TCGA-KN-8431-11A-01D-2311-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3 93b51c61-6eea-4228-a102-840a2e118522 3e1c3b30-dc01-472e-b1c3-b81a850659d3