Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABP1 26 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 150554284 150554284 + Missense_Mutation SNP C C A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 AIM1L 55057 hgsc.bcm.edu 37 1 26672402 26672403 + Frame_Shift_Ins INS - - G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 ANKS4B 257629 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 21261382 21261382 + Nonsense_Mutation SNP C C G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 ARHGAP32 9743 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 128839969 128839969 + Silent SNP C C T novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 BACH1 571 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 30714928 30714928 + Missense_Mutation SNP G G T novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 BLK 640 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 11412944 11412944 + Silent SNP C C G rs149756811 alternate_allele TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 BSN 8927 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 49690033 49690033 + Missense_Mutation SNP G G A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 BTF3L4 91408 broad.mit.edu;hgsc.bcm.edu 37 1 52552415 52552415 + Silent SNP G G A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 CACNG4 27092 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 65021007 65021007 + Silent SNP C C T novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 CD22 933 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 35827039 35827039 + Silent SNP G G T novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 CDH10 1008 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 24491776 24491776 + Missense_Mutation SNP C C T novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 CHST4 10164 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 71570851 71570851 + Missense_Mutation SNP C C T novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 CNTNAP1 8506 broad.mit.edu;hgsc.bcm.edu 37 17 40836243 40836243 + Missense_Mutation SNP A A G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 COL4A3 1285 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 228176506 228176506 + Missense_Mutation SNP C C T novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 COL5A2 1290 hgsc.bcm.edu;ucsc.edu 37 2 189925460 189925464 + Frame_Shift_Del DEL TCACC TCACC - novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 TCACC TCACC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 CTCFL 140690 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 56099123 56099123 + Silent SNP A A G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 CYTSB 0 broad.mit.edu;ucsc.edu 37 17 20108270 20108270 + Missense_Mutation SNP A G G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 DCST2 127579 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 154995893 154995893 + Silent SNP G G A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 EPHA10 284656 hgsc.bcm.edu 37 1 38227130 38227136 + Frame_Shift_Del DEL ACAGGCA ACAGGCA - novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 ACAGGCA ACAGGCA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 FAM135B 51059 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 139190851 139190851 + Missense_Mutation SNP G G T novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 FAT2 2196 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 150945790 150945790 + Silent SNP T T C novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 GON4L 54856 broad.mit.edu;hgsc.bcm.edu 37 1 155721637 155721637 + Missense_Mutation SNP G G C novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 GTF3C1 2975 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 27497454 27497454 + Missense_Mutation SNP C C A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 HSPA8 3312 broad.mit.edu;hgsc.bcm.edu 37 11 122930668 122930668 + Silent SNP A A G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 INSC 387755 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 15170770 15170770 + Missense_Mutation SNP G G A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 KDM3B 51780 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 137708520 137708520 + Missense_Mutation SNP G G T novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 G G G T G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 KPNA1 3836 broad.mit.edu;ucsc.edu 37 3 122160886 122160886 + Missense_Mutation SNP T C C novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 LAMA1 284217 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 6966196 6966196 + Missense_Mutation SNP T T A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T T A T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 LCE1E 353135 hgsc.bcm.edu 37 1 152760113 152760115 + In_Frame_Del DEL ACT ACT - novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 ACT ACT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 MAK 4117 hgsc.bcm.edu 37 6 10796273 10796274 + Frame_Shift_Ins INS - - G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 ME1 4199 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 83963360 83963360 + Missense_Mutation SNP C C T novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 ME2 4200 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 48439249 48439249 + Missense_Mutation SNP A A C novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 MKS1 54903 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 56285343 56285343 + Silent SNP A A G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 MS4A3 932 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 59837676 59837676 + Splice_Site SNP G G A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 G G G A G G Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 MYH15 22989 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 108205348 108205348 + Silent SNP G G C novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 NAT15 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 3533548 3533548 + Missense_Mutation SNP T T C novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 NAT15 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 3533549 3533549 + Missense_Mutation SNP T T A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 NGLY1 55768 broad.mit.edu;hgsc.bcm.edu 37 3 25824816 25824816 + Silent SNP C C T novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 NRSN1 140767 hgsc.bcm.edu;ucsc.edu 37 6 24145877 24145877 + Frame_Shift_Del DEL T T - novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 PAPPA2 60676 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 176659299 176659299 + Missense_Mutation SNP T T C novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T T C T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52597379 52597379 + Frame_Shift_Del DEL C C - novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 PCK1 5105 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 56138150 56138150 + Frame_Shift_Del DEL G G - novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 G G G - G G Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 PML 5371 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 74336686 74336686 + Missense_Mutation SNP C C G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 RPL10A 4736 hgsc.bcm.edu 37 6 35437244 35437247 + Frame_Shift_Del DEL CCCA CCCA - novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 CCCA CCCA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 SERINC2 347735 hgsc.bcm.edu 37 1 31902299 31902300 + Frame_Shift_Ins INS - - G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 SMCR8 140775 broad.mit.edu;ucsc.edu 37 17 18219186 18219186 + Missense_Mutation SNP A G G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 TBCC 6903 broad.mit.edu;hgsc.bcm.edu 37 6 42713803 42713803 + Silent SNP G G A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 TMEM181 57583 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 159029391 159029391 + Missense_Mutation SNP G G A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 TMEM195 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 15405181 15405181 + Frame_Shift_Del DEL A A - novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 TRPV6 55503 broad.mit.edu;ucsc.edu 37 7 142572835 142572835 + Missense_Mutation SNP A G G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 179593688 179593688 + Silent SNP A A G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 A A A G A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 UBR4 23352 broad.mit.edu;hgsc.bcm.edu 37 1 19505691 19505691 + Silent SNP T T C novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T T C T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 WT1 7490 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 32421532 32421532 + Missense_Mutation SNP A A T novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 A A A T A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 ZFP91 80829 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 58384897 58384897 + Silent SNP C C A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 ZNF425 155054 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 148801994 148801994 + Silent SNP C C G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 ZNF679 168417 broad.mit.edu;ucsc.edu 37 7 63726378 63726378 + Missense_Mutation SNP T A A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 ZNF773 374928 broad.mit.edu;hgsc.bcm.edu 37 19 58018037 58018037 + Nonsense_Mutation SNP A A T novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 ZNFX1 57169 hgsc.bcm.edu;ucsc.edu 37 20 47864087 47864093 + Frame_Shift_Del DEL AGGCCAG AGGCCAG - novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 AGGCCAG AGGCCAG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 LOC441666 441666 broad.mit.edu 37 10 42832426 42832426 + RNA SNP T C C novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 LOC96610 96610 broad.mit.edu 37 22 23006960 23006960 + RNA SNP C A A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 LOC96610 96610 broad.mit.edu 37 22 23006961 23006961 + RNA SNP C T T novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 MAST3 23031 broad.mit.edu 37 19 18234143 18234143 + Silent SNP C A A novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 MIR1293 100302220 broad.mit.edu 37 12 50627995 50627995 + RNA DEL T - - novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 SVIL 6840 broad.mit.edu 37 10 29843732 29843732 + Missense_Mutation SNP T G G novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 TBC1D3P2 440452 broad.mit.edu 37 17 60342186 60342186 + RNA SNP T C C rs79096325 byfrequency TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 TPTE 7179 broad.mit.edu 37 21 11012923 11012923 + RNA SNP T C C novel TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708 Unknown 0 broad.mit.edu 37 22 18844763 18844763 + RNA SNP T C C rs1064849 bycluster TCGA-A3-3326-01A-01D-0966-08 TCGA-A3-3326-11A-01D-0966-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 60ed222b-cd0c-4bc5-acd0-39f207be3289 51796640-6ad6-4052-94c3-fa285e430708