Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ADAMTS18 170692 hgsc.bcm.edu 37 16 77468336 77468336 + Missense_Mutation SNP C C G novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 ALOX5 240 hgsc.bcm.edu 37 10 45935953 45935953 + Missense_Mutation SNP A A T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 ANKRD43 0 hgsc.bcm.edu;ucsc.edu 37 5 132150878 132150878 + Missense_Mutation SNP G G C novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 ARAP3 64411 hgsc.bcm.edu 37 5 141046056 141046056 + Nonsense_Mutation SNP G G T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 ATF7IP2 80063 hgsc.bcm.edu;ucsc.edu 37 16 10525097 10525097 + Nonsense_Mutation SNP C C G novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 C C C G C C Unknown Valid Somatic Phase_I WXS PGM SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 ATP2A2 488 hgsc.bcm.edu 37 12 110778549 110778549 + Missense_Mutation SNP C C T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 BLM 641 hgsc.bcm.edu 37 15 91306293 91306293 + Missense_Mutation SNP T T A novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 C5orf25 0 hgsc.bcm.edu 37 5 175740819 175740819 + Silent SNP T T G novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 CLK1 1195 hgsc.bcm.edu 37 2 201718657 201718657 + Missense_Mutation SNP C C G novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 DHX30 22907 hgsc.bcm.edu;ucsc.edu 37 3 47891146 47891146 + Nonsense_Mutation SNP G G A novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 DHX37 57647 hgsc.bcm.edu 37 12 125448980 125448980 + Missense_Mutation SNP C C T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 DNMT1 1786 hgsc.bcm.edu 37 19 10244940 10244940 + Missense_Mutation SNP A A G novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 FAM167B 84734 hgsc.bcm.edu 37 1 32713083 32713083 + Missense_Mutation SNP G G A novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 FAM78B 149297 hgsc.bcm.edu 37 1 166135418 166135418 + Missense_Mutation SNP A A G novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 GALNT7 51809 hgsc.bcm.edu 37 4 174223217 174223217 + Missense_Mutation SNP G G C novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 GLYAT 10249 hgsc.bcm.edu 37 11 58482866 58482866 + Missense_Mutation SNP C C T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 GRXCR1 389207 hgsc.bcm.edu;ucsc.edu 37 4 42895568 42895568 + Missense_Mutation SNP A A T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 HEPHL1 341208 hgsc.bcm.edu 37 11 93754553 93754553 + Missense_Mutation SNP G G T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 HLA-C 3107 hgsc.bcm.edu 37 6 31237786 31237786 + Silent SNP A A T rs41556617 bycluster TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 IFT140 9742 hgsc.bcm.edu 37 16 1636198 1636198 + Missense_Mutation SNP G G A novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 KIF1B 23095 hgsc.bcm.edu;ucsc.edu 37 1 10397234 10397234 + Missense_Mutation SNP G G A novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 LSS 4047 hgsc.bcm.edu 37 21 47642638 47642638 + Missense_Mutation SNP A A T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 MACF1 23499 hgsc.bcm.edu 37 1 39900149 39900149 + Missense_Mutation SNP G G A novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 MUC4 4585 hgsc.bcm.edu 37 3 195506704 195506704 + Missense_Mutation SNP T T C novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 NFATC3 4775 hgsc.bcm.edu 37 16 68225473 68225473 + Silent SNP C C T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 NWD1 284434 hgsc.bcm.edu;ucsc.edu 37 19 16875873 16875873 + Silent SNP C C T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 PITPNM3 83394 hgsc.bcm.edu 37 17 6367535 6367535 + Missense_Mutation SNP G G C novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 PLEKHM3 389072 hgsc.bcm.edu 37 2 208795801 208795801 + Nonsense_Mutation SNP C C A novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 PRAMEF12 390999 hgsc.bcm.edu 37 1 12835193 12835193 + Missense_Mutation SNP C C A novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 PTCH1 5727 hgsc.bcm.edu 37 9 98239880 98239880 + Silent SNP T T C novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 RAPGEF6 51735 hgsc.bcm.edu;ucsc.edu 37 5 130788816 130788816 + Missense_Mutation SNP G G T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 SCN10A 6336 hgsc.bcm.edu;ucsc.edu 37 3 38798643 38798643 + Missense_Mutation SNP G G A novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 SEMA4D 10507 hgsc.bcm.edu 37 9 92017852 92017852 + Silent SNP C C T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 SLC38A10 124565 hgsc.bcm.edu 37 17 79268692 79268692 + Silent SNP C C T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 SPAG1 6674 hgsc.bcm.edu 37 8 101196265 101196265 + Silent SNP A A G novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 SPESP1 246777 hgsc.bcm.edu 37 15 69237966 69237966 + Silent SNP A A G novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 SRSF4 6429 hgsc.bcm.edu 37 1 29475160 29475160 + Missense_Mutation SNP T T A novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 SST 6750 hgsc.bcm.edu 37 3 187388007 187388007 + Missense_Mutation SNP C C T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 TGM6 343641 hgsc.bcm.edu 37 20 2375966 2375966 + Missense_Mutation SNP G G T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 TRIM45 80263 hgsc.bcm.edu 37 1 117660996 117660996 + Silent SNP C C T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 USP32 84669 hgsc.bcm.edu;ucsc.edu 37 17 58343414 58343414 + Missense_Mutation SNP G G A novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 VHL 7428 hgsc.bcm.edu;ucsc.edu 37 3 10191470 10191470 + Splice_Site SNP G G A rs5030817 TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G G A G G Unknown Valid Somatic Phase_I WXS PGM SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 YWHAE 7531 hgsc.bcm.edu 37 17 1257623 1257623 + Silent SNP A A G novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 ZBTB25 7597 hgsc.bcm.edu 37 14 64953924 64953924 + Missense_Mutation SNP G G T rs142507817 alternate_allele TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2 ZNF704 619279 hgsc.bcm.edu;ucsc.edu 37 8 81577134 81577134 + Silent SNP G G T novel TCGA-B0-4819-01A-01D-1361-10 TCGA-B0-4819-11A-01D-1361-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 5df3f4f0-5000-42a2-9e85-c3b0e93eae49 d02a7555-9cad-43ac-883c-031847eba9e2