Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID AADACL4 343066 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 12711197 12711197 + Missense_Mutation SNP T T C novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba ABCD3 5825 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 94946103 94946103 + Missense_Mutation SNP A A G novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba ACSF2 80221 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 48538731 48538731 + Silent SNP G G C novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba AKR1C1 1645 broad.mit.edu;hgsc.bcm.edu 37 10 5011032 5011032 + Missense_Mutation SNP G G T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba ATXN2L 11273 hgsc.bcm.edu;ucsc.edu 37 16 28847383 28847383 + Frame_Shift_Del DEL G G - novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba BAP1 8314 broad.mit.edu;hgsc.bcm.edu 37 3 52440295 52440295 + Nonsense_Mutation SNP G G A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G G A G G Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba BAP1 8314 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52439913 52439913 + Nonsense_Mutation SNP G G A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba BIRC6 57448 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 32640716 32640716 + Nonsense_Mutation SNP C C A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba CAMK1D 57118 hgsc.bcm.edu;ucsc.edu 37 10 12833227 12833228 + Frame_Shift_Ins INS - - A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba CBR1 873 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 37445149 37445149 + Missense_Mutation SNP T T G novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba CDADC1 81602 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 49852533 49852533 + Silent SNP C C T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba CDKN2AIP 55602 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 184366710 184366710 + Missense_Mutation SNP A A G novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba CUZD1 50624 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 124594540 124594540 + Missense_Mutation SNP C C T rs188322992 by1000genomes TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba DDX6 1656 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 118656898 118656898 + Silent SNP C C T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba DOCK8 81704 hgsc.bcm.edu 37 9 311956 311957 + Frame_Shift_Ins INS - - G novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba DPYD 1806 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 97564120 97564120 + Silent SNP C C T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba EHHADH 1962 hgsc.bcm.edu 37 3 184971754 184971755 + Frame_Shift_Ins INS - - G novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba EIF2AK4 440275 hgsc.bcm.edu;ucsc.edu 37 15 40299258 40299258 + Frame_Shift_Del DEL T T - novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba EXOC2 55770 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 532529 532529 + Missense_Mutation SNP A A G novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba FAT4 79633 broad.mit.edu;hgsc.bcm.edu 37 4 126398472 126398472 + Silent SNP A A G novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba FBLN1 2192 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 45929741 45929741 + Silent SNP G G A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba FGFR1 2260 broad.mit.edu;hgsc.bcm.edu 37 8 38275767 38275767 + Missense_Mutation SNP C C G rs121909637 alternate_allele TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C C G C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba FOLR4 390243 broad.mit.edu;ucsc.edu 37 11 94040428 94040428 + Missense_Mutation SNP G A A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba FOXD4L4 349334 hgsc.bcm.edu 37 9 70427685 70427685 + Frame_Shift_Del DEL G G - rs59364037 TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba FUBP3 8939 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 133485350 133485350 + Missense_Mutation SNP A A T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba GCNT2 2651 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 10529342 10529342 + Missense_Mutation SNP A A T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba GPATCH1 55094 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 33608751 33608751 + Silent SNP C C T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba GPR63 81491 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 97247000 97247000 + Missense_Mutation SNP C C A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba GPRIN1 114787 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 176026768 176026768 + Missense_Mutation SNP C C T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba HIPK3 10114 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 33363111 33363111 + Silent SNP A A G novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba HIST1H3J 8356 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 27858524 27858524 + Missense_Mutation SNP G G A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba IRX1 79192 broad.mit.edu;hgsc.bcm.edu 37 5 3599934 3599934 + Missense_Mutation SNP C C A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba KCNC4 3749 broad.mit.edu;hgsc.bcm.edu 37 1 110766481 110766481 + Missense_Mutation SNP C C T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba KCNJ18 100134444 hgsc.bcm.edu 37 17 21318741 21318741 + Silent SNP C C T rs75113504 TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba KIAA0895 23366 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 36396886 36396886 + Missense_Mutation SNP C C A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba KLRC2 3822 broad.mit.edu;hgsc.bcm.edu 37 12 10588502 10588502 + Missense_Mutation SNP T T A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba LRIG2 9860 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 113616152 113616152 + Missense_Mutation SNP C C T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba LRP1B 53353 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 141777522 141777522 + Missense_Mutation SNP G G A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba MUC16 94025 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 9065878 9065878 + Missense_Mutation SNP T T C novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 T T T C T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba NCKAP1L 3071 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 54893217 54893217 + Nonsense_Mutation SNP A A T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba NT5DC3 51559 broad.mit.edu;hgsc.bcm.edu 37 12 104182685 104182685 + Missense_Mutation SNP C C G novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba OR4N2 390429 hgsc.bcm.edu 37 14 20296055 20296056 + Frame_Shift_Ins INS - - T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba PHLDA1 22822 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 76424988 76424988 + Silent SNP C C T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba PLOD3 8985 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 100856398 100856398 + Missense_Mutation SNP C C T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba PTAR1 375743 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 72338284 72338284 + Missense_Mutation SNP A A T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba RAPGEF5 9771 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 22165225 22165225 + Missense_Mutation SNP A A T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba RBFOX1 54715 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 7568250 7568250 + Silent SNP C C T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba RELN 5649 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 103293158 103293158 + Missense_Mutation SNP C C G novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C C G C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba RGS3 5998 broad.mit.edu;hgsc.bcm.edu 37 9 116346645 116346645 + Missense_Mutation SNP G G C novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba RP1L1 94137 broad.mit.edu;hgsc.bcm.edu 37 8 10468848 10468848 + Silent SNP C C T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba SELP 6403 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 169565278 169565278 + Silent SNP A A G novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba SF3B2 10992 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 65827424 65827424 + Missense_Mutation SNP C C T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba SFRS15 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 33074643 33074643 + Missense_Mutation SNP T T C novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 T T T C T T Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba SLC5A1 6523 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 32482294 32482294 + Missense_Mutation SNP T T C novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba SLX4 84464 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 3640657 3640657 + Silent SNP G G T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba SORCS2 57537 broad.mit.edu;hgsc.bcm.edu 37 4 7533341 7533341 + Silent SNP G G T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba SPEF1 25876 broad.mit.edu;hgsc.bcm.edu 37 20 3759097 3759097 + Missense_Mutation SNP C C T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba SUZ12 23512 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 30302576 30302576 + Nonsense_Mutation SNP A A T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba TCF20 6942 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 42605745 42605745 + Missense_Mutation SNP T T A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba TCF20 6942 broad.mit.edu;ucsc.edu 37 22 42605746 42605746 + Nonsense_Mutation SNP C A A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba TNRC6A 27327 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 24788568 24788568 + Missense_Mutation SNP G G A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba TP53 7157 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 7579396 7579396 + Silent SNP G G A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba TRIM23 373 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 64892965 64892965 + Missense_Mutation SNP C C T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba TSPAN6 7105 broad.mit.edu;hgsc.bcm.edu 37 X 99890220 99890220 + Missense_Mutation SNP C C A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 179474417 179474417 + Missense_Mutation SNP G G T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G G T G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba TUB 7275 hgsc.bcm.edu 37 11 8111676 8111676 + Missense_Mutation SNP A A T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba UGGT1 56886 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 128927880 128927880 + Silent SNP G G T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba UGT2A3 79799 broad.mit.edu;hgsc.bcm.edu 37 4 69795773 69795773 + Missense_Mutation SNP G G C novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba WNK3 65267 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 54321069 54321069 + Missense_Mutation SNP T T C novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 T T T C T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba ZC3H6 376940 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 113074843 113074843 + Missense_Mutation SNP A A C novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba ZNF165 7718 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 28053590 28053590 + Missense_Mutation SNP A A T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba FAM110B 90362 broad.mit.edu 37 8 59059205 59059205 + Missense_Mutation SNP A G G novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba LOC96610 96610 broad.mit.edu 37 22 22663086 22663086 + RNA SNP T G G rs71318762 alternate_allele TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba LOC96610 96610 broad.mit.edu 37 22 22663087 22663087 + RNA SNP A G G rs1054158 bycluster;byhapmap;by1000genomes TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba POC5 134359 broad.mit.edu 37 5 74981058 74981058 + Missense_Mutation SNP C A A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba PPAPDC1B 84513 broad.mit.edu 37 8 38125965 38125965 + Silent SNP G C C novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba RASAL1 8437 broad.mit.edu 37 12 113565939 113565939 + Missense_Mutation SNP T A A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba SORCS2 57537 broad.mit.edu 37 4 7533342 7533342 + Missense_Mutation SNP A T T novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba ST7 7982 broad.mit.edu 37 7 116870009 116870009 + Silent SNP G A A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba TSPAN6 7105 broad.mit.edu 37 X 99890219 99890219 + Missense_Mutation SNP C A A novel TCGA-B0-5092-01A-01D-1421-08 TCGA-B0-5092-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 76b9d9e3-6010-4894-8435-debe95a376b5 36ee6525-023c-42c2-a752-38bc55af5aba