Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCA1 19 broad.mit.edu;ucsc.edu 37 9 107558370 107558370 + Missense_Mutation SNP G C C novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee ABCA2 20 broad.mit.edu;hgsc.bcm.edu 37 9 139909971 139909971 + Missense_Mutation SNP C C A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee ANO4 121601 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 101504334 101504334 + Missense_Mutation SNP G G C novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee ARID4A 5926 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 58831552 58831552 + Silent SNP A A C novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee ATF7IP2 80063 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 10525162 10525162 + Missense_Mutation SNP G G T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G G T G G Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee CCNJL 79616 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 159680467 159680467 + Missense_Mutation SNP G G C novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee CHD7 55636 hgsc.bcm.edu 37 8 61777948 61777948 + Missense_Mutation SNP A A G novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee CLCN2 1181 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 184064449 184064449 + Missense_Mutation SNP C C T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee CLVS1 157807 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 62212433 62212433 + Missense_Mutation SNP G G T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee CSE1L 1434 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 47682942 47682942 + Missense_Mutation SNP C C A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee CSPG4 1464 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 75977757 75977757 + Missense_Mutation SNP G G C novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee DDX28 55794 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 68055772 68055772 + Missense_Mutation SNP T T C novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee DNAH2 146754 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 7701105 7701105 + Missense_Mutation SNP G G A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee FGFR3 2261 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 1804696 1804696 + Nonsense_Mutation SNP C C A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee FKBP6 8468 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 72745747 72745747 + Missense_Mutation SNP C C T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee GBA3 57733 broad.mit.edu;hgsc.bcm.edu 37 4 22820365 22820365 + Missense_Mutation SNP A A G novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee GPR162 27239 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 6936017 6936017 + Missense_Mutation SNP A A T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee HECTD2 143279 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 93258806 93258806 + Missense_Mutation SNP G G A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee HNRNPA2B1 3181 hgsc.bcm.edu 37 7 26235512 26235512 + Missense_Mutation SNP G G T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee IL17RC 84818 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 9960258 9960258 + Missense_Mutation SNP G G T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee ILDR2 387597 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 166908755 166908755 + Missense_Mutation SNP C C T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee IPO7 10527 broad.mit.edu;hgsc.bcm.edu 37 11 9446754 9446754 + Missense_Mutation SNP G G A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee LRP5 4041 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 68125161 68125161 + Silent SNP C C A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee LUM 4060 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 91502697 91502697 + Nonsense_Mutation SNP G G C novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee MAP7 9053 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 136682267 136682267 + Missense_Mutation SNP C C T rs35107962 bycluster;byfrequency;alternate_allele TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee MEGF6 1953 hgsc.bcm.edu 37 1 3413839 3413840 + Frame_Shift_Ins INS - - G novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee MIOS 54468 hgsc.bcm.edu;ucsc.edu 37 7 7635995 7635995 + Silent SNP G G T rs115055951 byfrequency;by1000genomes;alternate_allele TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee MYCBP2 23077 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 77817235 77817235 + Missense_Mutation SNP C C G novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee MYH7 4625 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 23890215 23890215 + Missense_Mutation SNP A A T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee NPHP3 27031 broad.mit.edu;hgsc.bcm.edu 37 3 132416207 132416207 + Splice_Site SNP C C A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee OMD 4958 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 95177538 95177538 + Missense_Mutation SNP C C A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee PCDHGB3 56102 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 140750550 140750550 + Nonsense_Mutation SNP A A T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee PI4KB 5298 broad.mit.edu;hgsc.bcm.edu 37 1 151288136 151288136 + Silent SNP G G A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee PODXL 5420 broad.mit.edu;hgsc.bcm.edu 37 7 131194328 131194328 + Silent SNP C C T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee PRKAG2 51422 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 151262817 151262817 + Missense_Mutation SNP A A C novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee PTGER4 5734 hgsc.bcm.edu;ucsc.edu 37 5 40692474 40692475 + Frame_Shift_Del DEL TA TA - novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 TA TA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee RPL22L1 200916 broad.mit.edu;ucsc.edu 37 3 170585834 170585834 + Silent SNP G T T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee RSPH1 89765 hgsc.bcm.edu;ucsc.edu 37 21 43897417 43897417 + Silent SNP G G A rs75626002 byfrequency TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee SLC39A6 25800 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 33689577 33689577 + Silent SNP G G A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee SOX9 6662 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 70119701 70119701 + Missense_Mutation SNP C C G novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee SPHKAP 80309 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 228881360 228881360 + Missense_Mutation SNP C C G novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee SPTAN1 6709 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 131345086 131345086 + Missense_Mutation SNP G G C novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G G C G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee SYNRG 11276 hgsc.bcm.edu 37 17 35914100 35914101 + Frame_Shift_Ins INS - - G novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee TNC 3371 hgsc.bcm.edu 37 9 117838696 117838703 + Frame_Shift_Del DEL GTTGGCTC GTTGGCTC - novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 GTTGGCTC GTTGGCTC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee TRIM36 55521 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 114513529 114513529 + Missense_Mutation SNP C C T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee TRIOBP 11078 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 38151617 38151617 + Nonsense_Mutation SNP G G T rs185078175 by1000genomes;alternate_allele TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee VPS13A 23230 hgsc.bcm.edu;ucsc.edu 37 9 79908261 79908261 + Frame_Shift_Del DEL T T - novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee ZNF180 7733 hgsc.bcm.edu;ucsc.edu 37 19 44982265 44982265 + Frame_Shift_Del DEL C C - novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee ZNF670 93474 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 247202840 247202840 + Splice_Site SNP C C T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee ZSCAN21 7589 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 99662005 99662005 + Missense_Mutation SNP G G A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee CHST7 56548 broad.mit.edu 37 X 46433704 46433704 + Missense_Mutation SNP G A A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee GRIN3B 116444 broad.mit.edu 37 19 1009551 1009577 + In_Frame_Del DEL GCCCCCGCGGAGGCCCCACCACACTCT - - rs142516571 bycluster;by1000genomes TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 GCCCCCGCGGAGGCCCCACCACACTCT GCCCCCGCGGAGGCCCCACCACACTCT . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee IKZF1 10320 broad.mit.edu 37 7 50467716 50467716 + Silent SNP C T T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee PCDH15 65217 broad.mit.edu 37 10 55944912 55944912 + Missense_Mutation SNP C A A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee PNPLA1 285848 broad.mit.edu 37 6 36259314 36259314 + Missense_Mutation SNP G T T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee POLR3B 55703 broad.mit.edu 37 12 106820975 106820975 + Missense_Mutation SNP C T T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee Unknown 0 broad.mit.edu 37 10 27551917 27551917 + RNA SNP C T T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee Unknown 0 broad.mit.edu 37 17 18344842 18344842 + RNA SNP C T T novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee Unknown 0 broad.mit.edu 37 X 155254706 155254706 + Missense_Mutation SNP C T T rs4612551 TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee USH1G 124590 broad.mit.edu 37 17 72919137 72919137 + Missense_Mutation SNP T G G novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee XIST 7503 broad.mit.edu 37 X 73051012 73051012 + RNA SNP C A A novel TCGA-B0-5109-01A-02D-1421-08 TCGA-B0-5109-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 58d6e408-ed00-4e1f-bffa-e73250cfe4a0 d6cfdaff-0147-415a-8b30-aaa03a3a5aee