Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ANKRD26 22852 hgsc.bcm.edu;ucsc.edu 37 10 27303499 27303499 + Frame_Shift_Del DEL T T - novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde AOC2 314 hgsc.bcm.edu 37 17 40996867 40996868 + Frame_Shift_Ins INS - - G novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde AP4E1 23431 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 51216161 51216161 + Missense_Mutation SNP G G T novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde AP4E1 23431 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 51217400 51217400 + Nonsense_Mutation SNP A A T novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde B4GALT3 8703 hgsc.bcm.edu;ucsc.edu 37 1 161141850 161141851 + Frame_Shift_Ins INS - - A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde C11orf24 53838 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 68029634 68029634 + Missense_Mutation SNP G G A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde C17orf49 124944 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 6919830 6919830 + Missense_Mutation SNP A A G novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde C20orf103 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 9496942 9496942 + Missense_Mutation SNP A A G novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde CACHD1 57685 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 65143848 65143848 + Silent SNP T T C novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde CACNG2 10369 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 36960524 36960524 + Silent SNP G G A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde CBLN1 869 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 49313372 49313372 + Missense_Mutation SNP G G C novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde CFH 3075 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 196695938 196695938 + Missense_Mutation SNP G G A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde COL11A2 1302 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 33133477 33133477 + Silent SNP G G A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde CYTH1 9267 broad.mit.edu;ucsc.edu 37 17 76677108 76677108 + Missense_Mutation SNP C A A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde DNALI1 7802 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 38022628 38022628 + Silent SNP C C T novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde DNTTIP2 30836 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 94335473 94335473 + Silent SNP G G A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde ELFN2 114794 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 37770000 37770000 + Missense_Mutation SNP C C G novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde FAM83C 128876 broad.mit.edu;hgsc.bcm.edu 37 20 33875579 33875579 + Missense_Mutation SNP C C T novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde GABRQ 55879 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 151815617 151815617 + Missense_Mutation SNP G G C novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde HIST1H2BO 8348 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 27861305 27861305 + Missense_Mutation SNP C C T novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde MYPN 84665 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 69926368 69926368 + Missense_Mutation SNP C C A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde NDUFS1 4719 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 206997774 206997774 + Missense_Mutation SNP C C A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde NEXN 91624 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 78383401 78383401 + Missense_Mutation SNP C C A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde NR5A2 2494 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 200014711 200014711 + Missense_Mutation SNP A A C novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde ODZ4 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 78412936 78412936 + Silent SNP G G A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde P2RX1 5023 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 3807223 3807223 + Missense_Mutation SNP G G A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52621519 52621519 + Frame_Shift_Del DEL T T - novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde PKD2L2 27039 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 137275829 137275829 + Missense_Mutation SNP G G T novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde PRR12 57479 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 50118189 50118189 + Silent SNP C C T novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde REG1B 5968 hgsc.bcm.edu;ucsc.edu 37 2 79314032 79314032 + Frame_Shift_Del DEL G G - novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde RNF145 153830 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 158603776 158603776 + Missense_Mutation SNP A A C novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde SLC6A13 6540 hgsc.bcm.edu;ucsc.edu 37 12 335652 335652 + Missense_Mutation SNP T T C novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde SP140L 93349 broad.mit.edu;hgsc.bcm.edu 37 2 231254640 231254640 + Missense_Mutation SNP G G T novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde SP140L 93349 broad.mit.edu;hgsc.bcm.edu 37 2 231254641 231254641 + Missense_Mutation SNP A A T novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde TMEM104 54868 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 72832324 72832324 + Missense_Mutation SNP G G T novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde TUBB4 0 broad.mit.edu;hgsc.bcm.edu 37 19 6501365 6501365 + Silent SNP G G A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde VHL 7428 broad.mit.edu;ucsc.edu 37 3 10191470 10191470 + Splice_Site SNP G T T rs5030817 alternate_allele TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde WNT3 7473 hgsc.bcm.edu 37 17 44851096 44851097 + Frame_Shift_Ins INS - - G novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde ZFHX4 79776 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 77766976 77766976 + Missense_Mutation SNP C C G novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde ZZZ3 26009 broad.mit.edu;hgsc.bcm.edu 37 1 78045311 78045311 + Silent SNP T T C novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde LOC284232 0 broad.mit.edu 37 13 19413025 19413025 + RNA SNP A G G novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde Unknown 0 broad.mit.edu 37 11 55062213 55062213 + RNA SNP C A A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde Unknown 0 broad.mit.edu 37 15 28929371 28929371 + RNA SNP G T T novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde Unknown 0 broad.mit.edu 37 9 88455089 88455089 + RNA SNP G A A novel TCGA-B0-5113-01A-01D-1421-08 TCGA-B0-5113-11A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 64b234e0-74f6-453f-b5cb-280e01fba09b f7b96180-6131-45d9-8a88-771bc7296cde