Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCB1 5243 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 87175282 87175282 + Missense_Mutation SNP G G C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 ABCG1 9619 broad.mit.edu;hgsc.bcm.edu 37 21 43711704 43711704 + Missense_Mutation SNP A A C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 ADAM30 11085 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 120437279 120437279 + Missense_Mutation SNP T T G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 ADRB2 154 hgsc.bcm.edu;ucsc.edu 37 5 148207202 148207202 + Frame_Shift_Del DEL A A - novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 AFAP1L1 134265 broad.mit.edu;hgsc.bcm.edu 37 5 148685923 148685923 + Missense_Mutation SNP G G T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 ALDOB 229 broad.mit.edu;ucsc.edu 37 9 104192184 104192184 + Silent SNP G A A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 ANKS3 124401 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 4780097 4780097 + Missense_Mutation SNP C C A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 ARHGAP28 79822 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 6870684 6870684 + Missense_Mutation SNP A A C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 ARHGEF25 115557 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 58004440 58004440 + Nonsense_Mutation SNP G G T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 ATP2A3 489 broad.mit.edu;hgsc.bcm.edu 37 17 3851044 3851044 + Silent SNP G G T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 BRDT 676 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 92470112 92470112 + Nonsense_Mutation SNP G G T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 C10orf137 26098 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 127426983 127426983 + Silent SNP A A T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 C15orf55 256646 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 34647722 34647722 + Nonsense_Mutation SNP G G T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 C5orf22 55322 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 31538433 31538433 + Missense_Mutation SNP C C G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 CCDC40 55036 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 78013722 78013722 + Missense_Mutation SNP G G C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 CDH8 1006 hgsc.bcm.edu 37 16 61851549 61851550 + Frame_Shift_Ins INS - - C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 CDKAL1 54901 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 20781422 20781422 + Silent SNP G G C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 CELSR2 1952 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 109795801 109795801 + Missense_Mutation SNP G G A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 CHD2 1106 hgsc.bcm.edu 37 15 93545457 93545457 + Silent SNP G G A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 CHDH 55349 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 53853056 53853056 + Silent SNP C C A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 CHID1 66005 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 869878 869878 + Missense_Mutation SNP A A T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 CHMP1B 57132 hgsc.bcm.edu 37 18 11851738 11851739 + Frame_Shift_Ins INS - - G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 CPEB4 80315 hgsc.bcm.edu;ucsc.edu 37 5 173316872 173316874 + In_Frame_Del DEL AAT AAT - novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 AAT AAT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 CSF3R 1441 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 36932909 36932909 + Silent SNP C C T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 CST11 140880 hgsc.bcm.edu;ucsc.edu 37 20 23432483 23432484 + Frame_Shift_Ins INS - - T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 CTSE 1510 hgsc.bcm.edu;ucsc.edu 37 1 206320203 206320203 + Frame_Shift_Del DEL A A - novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 CYP1A2 1544 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 75042368 75042368 + Missense_Mutation SNP G G A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 CYP4F12 66002 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 15784434 15784434 + Missense_Mutation SNP C C T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 DAPK2 23604 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 64218210 64218210 + Nonsense_Mutation SNP C C A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 DDX58 23586 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 32480246 32480246 + Missense_Mutation SNP A A T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 DHX35 60625 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 37630475 37630475 + Missense_Mutation SNP T T A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 DHX35 60625 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 37630476 37630476 + Missense_Mutation SNP A A T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 DNAH11 8701 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 21904264 21904264 + Missense_Mutation SNP A A C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 DNAH2 146754 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 7661862 7661862 + Missense_Mutation SNP A A T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 DOCK8 81704 hgsc.bcm.edu;ucsc.edu 37 9 418160 418160 + Frame_Shift_Del DEL G G - novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 DRD5 1816 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 9784959 9784959 + Missense_Mutation SNP C C A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 DZIP1 22873 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 96238362 96238362 + Silent SNP T T C rs181395665 by1000genomes TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 EEFSEC 60678 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 127983506 127983506 + Missense_Mutation SNP C C T rs142548867 byfrequency TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 EPN2 22905 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 19186485 19186485 + Missense_Mutation SNP C C T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 FLNB 2317 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 57994561 57994561 + Missense_Mutation SNP G G C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G G C G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 FOXI2 399823 broad.mit.edu;ucsc.edu 37 10 129536797 129536797 + Silent SNP C T T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 HELLS 3070 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 96350261 96350261 + Missense_Mutation SNP A A C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 ITGAD 3681 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 31435255 31435255 + Missense_Mutation SNP T T G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 KIAA0430 9665 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 15711240 15711240 + Missense_Mutation SNP G G C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 KIF2A 3796 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 61643911 61643911 + Missense_Mutation SNP C C A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 KLK5 25818 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 51453328 51453328 + Missense_Mutation SNP T T G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 KRT2 3849 hgsc.bcm.edu 37 12 53045840 53045840 + Silent SNP C C A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 LAMA5 3911 hgsc.bcm.edu 37 20 60902342 60902342 + Missense_Mutation SNP C C G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 LIMA1 51474 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 50571732 50571732 + Nonsense_Mutation SNP C C T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 LINGO2 158038 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 27949564 27949564 + Missense_Mutation SNP C C T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 MED15 51586 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 20921042 20921042 + Silent SNP T T C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 MMP28 79148 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 34093555 34093555 + Missense_Mutation SNP G G A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 MUC20 200958 hgsc.bcm.edu 37 3 195453018 195453018 + Frame_Shift_Del DEL C C - rs144288174 by1000genomes TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 MYLK 4638 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 123451941 123451941 + Missense_Mutation SNP T T G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 NINL 22981 hgsc.bcm.edu 37 20 25436414 25436421 + Frame_Shift_Del DEL ATGTTCTT ATGTTCTT - novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 ATGTTCTT ATGTTCTT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 NLRP4 147945 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 56370366 56370366 + Missense_Mutation SNP A A G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 NSMAF 8439 broad.mit.edu;hgsc.bcm.edu 37 8 59514096 59514096 + Splice_Site SNP T T C rs112233809 alternate_allele TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 OPN1SW 611 broad.mit.edu;hgsc.bcm.edu 37 7 128413772 128413772 + Silent SNP G G T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 PCDH1 5097 broad.mit.edu;hgsc.bcm.edu 37 5 141243175 141243175 + Missense_Mutation SNP C C G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 PCDH7 5099 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 31144197 31144197 + Missense_Mutation SNP C C T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 PJA1 64219 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 68382325 68382325 + Missense_Mutation SNP C C G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 PLD3 23646 broad.mit.edu;hgsc.bcm.edu 37 19 40873738 40873738 + Nonsense_Mutation SNP G G A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 POM121 9883 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 72413614 72413614 + Missense_Mutation SNP C C G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 POMP 51371 broad.mit.edu;hgsc.bcm.edu 37 13 29238707 29238707 + Splice_Site SNP G G T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 PRKCQ 5588 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 6520965 6520965 + Missense_Mutation SNP A A C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 PRSS54 221191 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 58314590 58314590 + Silent SNP G G A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 PTPRS 5802 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 5244419 5244419 + Missense_Mutation SNP C C A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 RB1CC1 9821 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 53554925 53554925 + Silent SNP G G A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 RGNEF 0 broad.mit.edu;ucsc.edu 37 5 73193844 73193844 + Missense_Mutation SNP G A A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 RLF 6018 hgsc.bcm.edu;ucsc.edu 37 1 40703457 40703458 + Frame_Shift_Del DEL AT AT - novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 AT AT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 SETD1A 9739 broad.mit.edu;hgsc.bcm.edu 37 16 30990969 30990969 + Missense_Mutation SNP C C A rs147948503 byfrequency;alternate_allele TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 SLC26A5 375611 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 103033397 103033397 + Missense_Mutation SNP T T G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 SLC2A8 29988 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 130167742 130167742 + Silent SNP A A G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 SLC39A6 25800 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 33694147 33694147 + Missense_Mutation SNP C C T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 SNX17 9784 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 27598997 27598997 + Missense_Mutation SNP C C G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 STON1-GTF2A1L 286749 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 48809434 48809434 + Silent SNP G G A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 TTLL4 9654 hgsc.bcm.edu 37 2 219602963 219602964 + Frame_Shift_Ins INS - - G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 TXLNB 167838 hgsc.bcm.edu;ucsc.edu 37 6 139583897 139583899 + In_Frame_Del DEL TGA TGA - novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 TGA TGA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 VWF 7450 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 6204658 6204658 + Missense_Mutation SNP A A T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 WDR92 116143 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 68384457 68384457 + Missense_Mutation SNP G G C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 XRCC5 7520 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 217001838 217001838 + Missense_Mutation SNP A A C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 XRN1 54464 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 142098968 142098968 + Missense_Mutation SNP T T A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 ZFYVE9 9372 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 52703253 52703253 + Missense_Mutation SNP G G C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 ZNFX1 57169 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 47887899 47887899 + Missense_Mutation SNP T T G novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 FGD5 152273 broad.mit.edu 37 3 14964675 14964675 + Silent SNP G C C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 FIZ1 84922 broad.mit.edu 37 19 56104632 56104632 + Silent SNP C T T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 KCNN2 3781 broad.mit.edu 37 5 113698631 113698632 + In_Frame_Ins INS - GCC GCC novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 MST1P2 11209 broad.mit.edu 37 1 16974243 16974243 + RNA SNP G C C rs12062025 byfrequency TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 NDUFA10 4705 broad.mit.edu 37 2 240960806 240960806 + Missense_Mutation SNP C A A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 OTOF 9381 broad.mit.edu 37 2 26698885 26698885 + Missense_Mutation SNP C A A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 RND1 27289 broad.mit.edu 37 12 49259538 49259538 + Missense_Mutation SNP G C C novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 RPA2 6118 broad.mit.edu 37 1 28240591 28240591 + Missense_Mutation SNP G T T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 SFRS16 0 broad.mit.edu 37 19 45562555 45562555 + Missense_Mutation SNP C A A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 SIRT7 51547 broad.mit.edu 37 17 79875994 79875994 + Missense_Mutation SNP C T T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 TMBIM1 64114 broad.mit.edu 37 2 219146894 219146894 + Translation_Start_Site SNP G T T novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 UXT 8409 broad.mit.edu 37 X 47518230 47518230 + Nonsense_Mutation SNP G A A novel TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7 VENTXP7 391518 broad.mit.edu 37 3 21447901 21447902 + RNA INS - CC CC rs112237068 bycluster;by1000genomes TCGA-B8-5164-01A-01D-1421-08 TCGA-B8-5164-10A-01D-1421-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6f8341c0-3a29-4ba5-9ba9-d23aeb845761 c3830c9f-cb3e-4870-9b9d-584a84ddedd7