Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ADAMTS8 11095 hgsc.bcm.edu 37 11 130278689 130278689 + Missense_Mutation SNP T T C novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 ATAD2B 54454 hgsc.bcm.edu 37 2 24108653 24108653 + Nonsense_Mutation SNP G G A novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 ATP13A2 23400 hgsc.bcm.edu 37 1 17313021 17313021 + Silent SNP G G A rs115985012 bycluster;byfrequency;by1000genomes TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 ATXN1 6310 hgsc.bcm.edu 37 6 16328275 16328275 + Silent SNP C C T rs146853248 byfrequency;alternate_allele TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 BCL6 604 hgsc.bcm.edu;ucsc.edu 37 3 187443369 187443369 + Missense_Mutation SNP G G T novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 C18orf19 0 hgsc.bcm.edu 37 18 13681611 13681611 + Missense_Mutation SNP C C A novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 C1orf85 112770 hgsc.bcm.edu 37 1 156264685 156264685 + Silent SNP T T G novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 C1orf86 199990 hgsc.bcm.edu 37 1 2121164 2121164 + Missense_Mutation SNP T T G novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 CACNA1A 773 hgsc.bcm.edu;ucsc.edu 37 19 13325357 13325357 + Silent SNP G G A novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 CARS 833 hgsc.bcm.edu 37 11 3028150 3028150 + Missense_Mutation SNP T T G novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 CATSPER4 378807 hgsc.bcm.edu 37 1 26527919 26527919 + Missense_Mutation SNP C C T novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 CLCN2 1181 hgsc.bcm.edu 37 3 184064478 184064479 + Frame_Shift_Del DEL CT CT - novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 CT CT . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 DEGS1 8560 hgsc.bcm.edu 37 1 224377848 224377848 + Missense_Mutation SNP C C T novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 DNAAF1 123872 hgsc.bcm.edu;ucsc.edu 37 16 84211399 84211399 + Silent SNP T T C novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 DNAH14 127602 hgsc.bcm.edu 37 1 225380562 225380565 + Frame_Shift_Del DEL AAAG AAAG - rs144339803 by1000genomes TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 AAAG AAAG . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 FAM179B 23116 hgsc.bcm.edu;ucsc.edu 37 14 45433129 45433129 + Missense_Mutation SNP C C A novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 C C C A C C Unknown Valid Somatic Phase_I WXS 454 SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 FAM188A 80013 hgsc.bcm.edu 37 10 15902225 15902225 + Missense_Mutation SNP A A G novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 FBXO18 84893 hgsc.bcm.edu;ucsc.edu 37 10 5963284 5963284 + Missense_Mutation SNP G G A novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 FZR1 51343 hgsc.bcm.edu 37 19 3531748 3531748 + Missense_Mutation SNP G G A novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 GRIN1 2902 hgsc.bcm.edu 37 9 140057373 140057373 + Missense_Mutation SNP G G A novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 GTF2E2 2961 hgsc.bcm.edu 37 8 30436496 30436496 + Missense_Mutation SNP T T C novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 GYS2 2998 hgsc.bcm.edu;ucsc.edu 37 12 21713365 21713365 + Missense_Mutation SNP A A T novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 KCNK1 3775 hgsc.bcm.edu 37 1 233802464 233802464 + Missense_Mutation SNP T T G novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 KDM2A 22992 hgsc.bcm.edu 37 11 67017709 67017709 + Silent SNP G G A novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 KIAA1543 0 hgsc.bcm.edu 37 19 7675369 7675369 + Silent SNP C C T rs62113420 bycluster;by1000genomes TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 KRT3 3850 hgsc.bcm.edu 37 12 53189696 53189696 + Missense_Mutation SNP C C G rs28721426 bycluster;byfrequency;by1000genomes TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 LCT 3938 hgsc.bcm.edu;ucsc.edu 37 2 136566910 136566910 + Silent SNP G G A novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 LILRA5 353514 hgsc.bcm.edu;ucsc.edu 37 19 54822747 54822747 + Missense_Mutation SNP A A C novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 LRRK2 120892 hgsc.bcm.edu;ucsc.edu 37 12 40692241 40692241 + Missense_Mutation SNP T T C novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 T T T C T T Unknown Valid Somatic Phase_I WXS 454 SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 LYPD1 116372 hgsc.bcm.edu;ucsc.edu 37 2 133403819 133403819 + Silent SNP C C T novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 MTUS1 57509 hgsc.bcm.edu;ucsc.edu 37 8 17612773 17612773 + Nonsense_Mutation SNP G G A novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 MUC16 94025 hgsc.bcm.edu;ucsc.edu 37 19 9061085 9061085 + Silent SNP G G T novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G G T G G Unknown Valid Somatic Phase_I WXS 454 SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 NRN1 51299 hgsc.bcm.edu 37 6 6002641 6002641 + Missense_Mutation SNP T T C novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 ODZ1 0 hgsc.bcm.edu;ucsc.edu 37 X 123517592 123517592 + Missense_Mutation SNP G G A novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G G A G G Unknown Valid Somatic Phase_I WXS 454 SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 PASK 23178 hgsc.bcm.edu 37 2 242082263 242082263 + Missense_Mutation SNP G G A rs144572631 TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 PKP4 8502 hgsc.bcm.edu;ucsc.edu 37 2 159481890 159481890 + Missense_Mutation SNP G G T novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 PRKAG2 51422 hgsc.bcm.edu 37 7 151478258 151478258 + Missense_Mutation SNP A A G novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 PSD3 23362 hgsc.bcm.edu 37 8 18725300 18725300 + Missense_Mutation SNP A A T novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 PSMD2 5708 hgsc.bcm.edu 37 3 184022099 184022099 + Missense_Mutation SNP T T G novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 RAD23A 5886 hgsc.bcm.edu;ucsc.edu 37 19 13058667 13058667 + Silent SNP G G A novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 RHEB 6009 hgsc.bcm.edu;ucsc.edu 37 7 151188050 151188050 + Missense_Mutation SNP A A T novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 A A A T A A Unknown Valid Somatic Phase_I WXS PGM SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 RP1L1 94137 hgsc.bcm.edu 37 8 10467579 10467581 + In_Frame_Del DEL TTC TTC - rs143686100 by1000genomes TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 TTC TTC . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 SLC12A5 57468 hgsc.bcm.edu 37 20 44686173 44686173 + Missense_Mutation SNP C C G novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 SYNE1 23345 hgsc.bcm.edu 37 6 152461141 152461141 + Missense_Mutation SNP G G T novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 TMEM64 169200 hgsc.bcm.edu 37 8 91657421 91657421 + Missense_Mutation SNP A A G novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 USP54 159195 hgsc.bcm.edu;ucsc.edu 37 10 75258858 75258858 + Missense_Mutation SNP G G T novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 ZFYVE9 9372 hgsc.bcm.edu 37 1 52704839 52704839 + Missense_Mutation SNP C C T novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 ZMYM6 9204 hgsc.bcm.edu 37 1 35454280 35454280 + Silent SNP T T C novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 ZNF33A 7581 hgsc.bcm.edu 37 10 38343536 38343539 + Frame_Shift_Del DEL TATT TATT - novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 TATT TATT . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6 ZNF699 374879 hgsc.bcm.edu;ucsc.edu 37 19 9406534 9406534 + Missense_Mutation SNP A A T novel TCGA-CJ-4895-01A-01D-1373-10 TCGA-CJ-4895-11A-01D-1373-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 3325f31d-a241-4fbe-9790-fef11ded224e fbafc349-c909-49da-ba80-e7d1d7c7e2b6