Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ACOX2 8309 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 58490979 58490979 + Missense_Mutation SNP A A G novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 ADCY8 114 broad.mit.edu;hgsc.bcm.edu 37 8 131880119 131880119 + Missense_Mutation SNP G G T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 AGTPBP1 23287 broad.mit.edu;hgsc.bcm.edu 37 9 88193989 88193989 + Missense_Mutation SNP T T C novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 AHSA1 10598 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 77929008 77929008 + Silent SNP T T C novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 ANKRD30A 91074 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 37508065 37508065 + Missense_Mutation SNP A A T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 ARHGEF17 9828 hgsc.bcm.edu 37 11 73020375 73020376 + In_Frame_Ins INS - - CTC novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 CLCA4 22802 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 87025997 87025997 + Missense_Mutation SNP C C T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 CLCN2 1181 hgsc.bcm.edu 37 3 184071131 184071132 + In_Frame_Ins INS - - CGG novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 CPT1A 1374 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 68575043 68575043 + Nonsense_Mutation SNP C C T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 CRAT 1384 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 131864768 131864768 + Nonsense_Mutation SNP G G A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 CUX1 1523 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 101925178 101925178 + Missense_Mutation SNP T T G novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 DST 667 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 56501389 56501389 + Missense_Mutation SNP T T A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T T A T T Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 EIF4G3 8672 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 21268372 21268372 + Silent SNP C C T rs150884106 byfrequency;alternate_allele TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 ESRRA 2101 broad.mit.edu;hgsc.bcm.edu 37 11 64082235 64082235 + Silent SNP G G A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 EXTL1 2134 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 26355761 26355761 + Missense_Mutation SNP T T A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 FOXJ3 22887 broad.mit.edu;hgsc.bcm.edu 37 1 42730816 42730816 + Missense_Mutation SNP T T A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 FTMT 94033 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 121187839 121187839 + Missense_Mutation SNP C C T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 GAL3ST1 9514 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 30951966 30951966 + Missense_Mutation SNP C C A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 GALNT11 63917 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 151807716 151807716 + Missense_Mutation SNP G G C novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 HAUS7 55559 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 152719888 152719888 + Missense_Mutation SNP T T C novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 HLA-A 3105 hgsc.bcm.edu 37 6 29912029 29912029 + Frame_Shift_Del DEL G G - rs149455102 bycluster;by1000genomes TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 HMGCS1 3157 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 43295906 43295906 + Missense_Mutation SNP T T A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 IL28RA 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 24484205 24484205 + Silent SNP T T C novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 INADL 10207 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 62341007 62341007 + Silent SNP T T A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 KCNJ15 3772 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 21 39671492 39671492 + Missense_Mutation SNP T T G novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 LRP1B 53353 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 141122269 141122269 + Missense_Mutation SNP C C T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 MESP1 55897 broad.mit.edu;hgsc.bcm.edu 37 15 90293454 90293454 + Missense_Mutation SNP A A T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 MET 4233 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 116415115 116415115 + Missense_Mutation SNP T T A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 MGAT5B 146664 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 74936814 74936814 + Missense_Mutation SNP G G A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 MSR1 4481 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 16032735 16032735 + Missense_Mutation SNP C C G novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C C G C C Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 NARS2 79731 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 78176959 78176959 + Missense_Mutation SNP A A C novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 PABPC1 26986 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 101724674 101724674 + Silent SNP A A G novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 PCDH19 57526 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 99662750 99662750 + Silent SNP G G A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 PCSK2 5126 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 17434533 17434533 + Silent SNP C C T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 PHYHIP 9796 broad.mit.edu;hgsc.bcm.edu 37 8 22084409 22084409 + Missense_Mutation SNP A A G novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 PLTP 5360 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 44538612 44538612 + Missense_Mutation SNP G G T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 POLL 27343 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 103345853 103345853 + Missense_Mutation SNP T T A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 POM121L12 285877 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 53103958 53103958 + Silent SNP C C T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 PREX1 57580 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 47292733 47292733 + Missense_Mutation SNP G G T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 PRKACG 5568 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 71628711 71628711 + Missense_Mutation SNP C C T rs138606760 TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 RFC4 5984 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 186508173 186508173 + Missense_Mutation SNP T T C novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 SCN10A 6336 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 38783881 38783881 + Silent SNP G G T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 SGK2 10110 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 42199332 42199332 + Missense_Mutation SNP G G C novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 SGK3 23678 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 67748020 67748020 + Missense_Mutation SNP T T C novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 SIPA1L3 23094 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 38591731 38591731 + Missense_Mutation SNP G G A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 SRA1 10011 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 139930679 139930679 + Missense_Mutation SNP G G T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 SUGP1 57794 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 19427268 19427268 + Missense_Mutation SNP T T G novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 TCF3 6929 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 1612391 1612391 + Missense_Mutation SNP C C A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 TOB1 10140 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 48940954 48940954 + Missense_Mutation SNP A A G novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 TSHZ1 10194 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 72998494 72998494 + Missense_Mutation SNP G G A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 UGT2B10 7365 broad.mit.edu;hgsc.bcm.edu 37 4 69692199 69692199 + Silent SNP C C T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 UPF1 5976 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 18960913 18960913 + Missense_Mutation SNP A A G novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 VCAN 1462 broad.mit.edu;hgsc.bcm.edu 37 5 82834030 82834030 + Silent SNP T T A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 VWA3B 200403 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 98828414 98828414 + Missense_Mutation SNP C C G novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 WDR7 23335 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 18 54424323 54424323 + Silent SNP A A G rs145083205 TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 ZNF285 26974 hgsc.bcm.edu 37 19 44891043 44891043 + Missense_Mutation SNP G G T rs77661661 TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 ZNF608 57507 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 124079840 124079840 + Silent SNP C C T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 ZNF624 57547 hgsc.bcm.edu;ucsc.edu 37 17 16527779 16527779 + Missense_Mutation SNP C C G rs142158380 bycluster;byfrequency;by1000genomes TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 CASP8AP2 9994 broad.mit.edu 37 6 90573113 90573113 + Nonsense_Mutation SNP T A A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 CDKN2A 1029 broad.mit.edu 37 9 21974753 21974753 + Missense_Mutation SNP A C C novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 FARP1 10160 broad.mit.edu 37 13 99083408 99083408 + Missense_Mutation SNP G T T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 PCDHB9 56127 broad.mit.edu 37 5 140568303 140568303 + Missense_Mutation SNP G A A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 PLA2G2F 64600 broad.mit.edu 37 1 20470069 20470069 + Silent SNP G A A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 PNCK 139728 broad.mit.edu 37 X 152936765 152936765 + Missense_Mutation SNP C A A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 RRN3P1 730092 broad.mit.edu 37 16 21817457 21817457 + Silent SNP G A A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 SAV1 60485 broad.mit.edu 37 14 51131954 51131954 + Nonsense_Mutation SNP C A A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 TNK2 10188 broad.mit.edu 37 3 195594610 195594610 + Silent SNP C T T novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3 Unknown 0 broad.mit.edu 37 9 88464491 88464491 + Missense_Mutation SNP T A A novel TCGA-CW-6087-01A-11D-1669-08 TCGA-CW-6087-11A-01D-1669-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 65c23a97-1763-47d5-8648-df24cf0226f3 8085a4ca-eaa6-417b-84d8-d5fa912dcdc3