Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABP1 26 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 150558149 150558149 + Missense_Mutation SNP C C G novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f ADAMTS12 81792 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 33576548 33576548 + Missense_Mutation SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f ALS2 57679 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 202598155 202598155 + Silent SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f ANAPC2 29882 broad.mit.edu;hgsc.bcm.edu 37 9 140075307 140075307 + Missense_Mutation SNP A A T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f ARHGAP21 57584 broad.mit.edu;hgsc.bcm.edu 37 10 24910118 24910118 + Missense_Mutation SNP C C T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f BEST1 7439 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 61725623 61725623 + Silent SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f BICD1 636 broad.mit.edu;ucsc.edu 37 12 32491840 32491840 + Silent SNP C A A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f BLM 641 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 91295052 91295052 + Missense_Mutation SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f BMP2K 55589 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 79808404 79808404 + Silent SNP T T C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f BRCA1 672 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 41243622 41243622 + Missense_Mutation SNP T T A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f BRCA1 672 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 41243623 41243623 + Missense_Mutation SNP T T G novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f C15orf26 161502 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 81440807 81440807 + Missense_Mutation SNP A A T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f C19orf44 84167 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 16620643 16620643 + Frame_Shift_Del DEL C C - novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f C22orf9 0 broad.mit.edu;hgsc.bcm.edu 37 22 45601754 45601754 + Missense_Mutation SNP C C A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f C2orf77 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 170505718 170505718 + Missense_Mutation SNP C C A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f C3orf25 0 broad.mit.edu;hgsc.bcm.edu 37 3 129127513 129127513 + Silent SNP C C T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f CACHD1 57685 hgsc.bcm.edu;ucsc.edu 37 1 65098290 65098290 + Frame_Shift_Del DEL A A - novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f CCAR1 55749 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 70507264 70507264 + Missense_Mutation SNP C C A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f CCDC62 84660 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 123282648 123282648 + Missense_Mutation SNP A A C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f CCNF 899 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 2481270 2481270 + Silent SNP C C T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f CELSR2 1952 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 109793167 109793167 + Missense_Mutation SNP C C T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f CKAP2L 150468 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 113514506 113514506 + Missense_Mutation SNP T T C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f CPD 1362 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 28750570 28750570 + Silent SNP G G C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f CR1 1378 hgsc.bcm.edu;ucsc.edu 37 1 207753683 207753683 + Frame_Shift_Del DEL G G - novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f CXCL10 3627 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 76943924 76943924 + Silent SNP A A G novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f DCTN1 1639 broad.mit.edu;hgsc.bcm.edu 37 2 74598753 74598753 + Missense_Mutation SNP G G T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f DDX46 9879 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 134131704 134131704 + Missense_Mutation SNP C C A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f DOCK2 1794 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 169174444 169174444 + Missense_Mutation SNP G G T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f DYX1C1 161582 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 55722880 55722880 + Missense_Mutation SNP T T A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f EAF2 55840 hgsc.bcm.edu 37 3 121554183 121554183 + Silent SNP C C T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f EAF2 55840 hgsc.bcm.edu;ucsc.edu 37 3 121554180 121554181 + Frame_Shift_Del DEL TC TC - novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 TC TC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f EGF 1950 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 110897230 110897230 + Frame_Shift_Del DEL T T - novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f EIF4G3 8672 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 21186921 21186921 + Missense_Mutation SNP T T A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f EMILIN1 11117 broad.mit.edu;hgsc.bcm.edu 37 2 27305278 27305278 + Missense_Mutation SNP C C A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f FAT3 120114 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 92534186 92534186 + Silent SNP G G T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f FOXB1 27023 broad.mit.edu;hgsc.bcm.edu 37 15 60297463 60297463 + Missense_Mutation SNP A A T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f FZD10 11211 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 130648663 130648663 + Missense_Mutation SNP C C A rs145130520 alternate_allele TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f FZD5 7855 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 208632143 208632143 + Missense_Mutation SNP C C G novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f GLI2 2736 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 121748151 121748151 + Missense_Mutation SNP C C G novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f GNA13 10672 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 63049764 63049764 + Missense_Mutation SNP C C G novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f GNPTAB 79158 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 102179968 102179968 + Silent SNP T T C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f HIC1 3090 broad.mit.edu;ucsc.edu 37 17 1961130 1961130 + Frame_Shift_Del DEL G - - novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f HR 55806 broad.mit.edu;hgsc.bcm.edu 37 8 21986313 21986313 + Missense_Mutation SNP G G T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f HVCN1 84329 hgsc.bcm.edu 37 12 111089052 111089052 + Silent SNP G G T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f HVCN1 84329 hgsc.bcm.edu;ucsc.edu 37 12 111089051 111089052 + Frame_Shift_Ins INS - - T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f IL2RA 3559 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 6067797 6067797 + Missense_Mutation SNP C C G novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f IPO9 55705 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 201843415 201843415 + Silent SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f IQSEC3 440073 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 280284 280284 + Missense_Mutation SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f KIAA1462 57608 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 10 30315665 30315665 + Missense_Mutation SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f KIAA2022 340533 broad.mit.edu;hgsc.bcm.edu 37 X 73962314 73962314 + Missense_Mutation SNP T T C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T T C T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f KIF13A 63971 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 17794626 17794626 + Missense_Mutation SNP C C A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f KPNA4 3840 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 160227602 160227602 + Nonsense_Mutation SNP C C A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f LRP1 4035 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 57591375 57591375 + Missense_Mutation SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f LRP2 4036 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 170081963 170081963 + Missense_Mutation SNP C C A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C C A C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f MACROD2 140733 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 16021897 16021897 + Missense_Mutation SNP A A T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A A T A A Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f METTL14 57721 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 119626961 119626961 + Missense_Mutation SNP A A T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f MKL1 57591 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 40831553 40831553 + Missense_Mutation SNP T T C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f MOB2 81532 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 1492592 1492592 + Nonsense_Mutation SNP G G T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f MTBP 27085 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 121500410 121500410 + Missense_Mutation SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f MTMR11 10903 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 149901785 149901785 + Silent SNP G G C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f MVP 9961 broad.mit.edu;ucsc.edu 37 16 29858549 29858549 + Missense_Mutation SNP G A A rs3815823 bycluster;byfrequency TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f MYCL1 4610 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 40363241 40363241 + Nonsense_Mutation SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f MYF6 4618 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 81101549 81101549 + Silent SNP G G T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f MYF6 4618 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 81101620 81101620 + Nonsense_Mutation SNP T T A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f MYH7B 57644 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 33585398 33585398 + Missense_Mutation SNP G G C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f MYST3 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 41792289 41792289 + Missense_Mutation SNP T T G novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f NF1 4763 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 29664584 29664584 + Missense_Mutation SNP T T C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T T C T T Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f NKX2-2 4821 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 21492858 21492858 + Missense_Mutation SNP C C G novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f PABPC3 5042 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 25670549 25670549 + Silent SNP C C G novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52649438 52649438 + Missense_Mutation SNP A A T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A A T A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f PCDHB8 56128 broad.mit.edu;hgsc.bcm.edu 37 5 140559547 140559547 + Silent SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f PCIF1 63935 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 44575022 44575022 + Frame_Shift_Del DEL G G - novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f PCSK6 5046 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 101938736 101938737 + Frame_Shift_Del DEL TT TT - novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 TT TT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f PIGB 9488 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 55621962 55621962 + Missense_Mutation SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f PIGT 51604 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 44050027 44050027 + Silent SNP C C T rs141166012 alternate_allele TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f PLD4 122618 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 105396381 105396381 + Missense_Mutation SNP T T C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f PRDM4 11108 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 108145796 108145797 + Frame_Shift_Ins INS - - C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f PRKD1 5587 broad.mit.edu;hgsc.bcm.edu 37 14 30132919 30132919 + Missense_Mutation SNP C C T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f PROL1 58503 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 71275489 71275489 + Silent SNP C C T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f PTDSS1 9791 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 97342498 97342498 + Missense_Mutation SNP C C A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f RAD51AP2 729475 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 17697415 17697415 + Silent SNP T T A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f RGP1 9827 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 9 35752830 35752830 + Missense_Mutation SNP T T A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f RIC8B 55188 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 107209026 107209026 + Nonsense_Mutation SNP G G T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f RPUSD2 27079 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 40865743 40865743 + Silent SNP G G T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f SEMA3C 10512 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 80433459 80433459 + Missense_Mutation SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f SEPT4 5414 hgsc.bcm.edu;ucsc.edu 37 17 56604046 56604064 + Frame_Shift_Del DEL AGAGGAATCATAGGGATCA AGAGGAATCATAGGGATCA - novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 AGAGGAATCATAGGGATCA AGAGGAATCATAGGGATCA . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f SHROOM4 57477 broad.mit.edu;hgsc.bcm.edu 37 X 50556986 50556986 + Silent SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f SLC45A4 57210 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 142228421 142228421 + Missense_Mutation SNP A A G novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f SLC5A12 159963 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 26694953 26694953 + Missense_Mutation SNP T T A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f SOX8 30812 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 1034895 1034895 + Missense_Mutation SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f SPAG7 9552 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 4863167 4863167 + Silent SNP A A T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f SPTA1 6708 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 158646048 158646048 + Missense_Mutation SNP A A C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f SRP72 6731 hgsc.bcm.edu 37 4 57333822 57333822 + Silent SNP G G T rs12513091 bycluster;byfrequency;byhapmap;by1000genomes TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f SSX5 6758 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 48053635 48053635 + Missense_Mutation SNP G G T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f ST14 6768 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 130064609 130064609 + Missense_Mutation SNP A A T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f SYCN 342898 broad.mit.edu;hgsc.bcm.edu 37 19 39694580 39694580 + Silent SNP G G T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f SYNE2 23224 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 64457262 64457262 + Frame_Shift_Del DEL T T - novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f THAP3 90326 broad.mit.edu;ucsc.edu 37 1 6694078 6694079 + Splice_Site DEL AG - - novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 AG AG . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f TLR8 51311 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 12938126 12938126 + Missense_Mutation SNP T T A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f TMTC4 84899 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 101277820 101277820 + Missense_Mutation SNP T T C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f TNRC6A 27327 broad.mit.edu;ucsc.edu 37 16 24816069 24816069 + Missense_Mutation SNP C T T novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f TSPAN17 26262 broad.mit.edu;hgsc.bcm.edu 37 5 176084597 176084597 + Silent SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f TTC1 7265 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 159437682 159437682 + Silent SNP T T C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f TTN 7273 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 179591818 179591818 + Frame_Shift_Del DEL T T - novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f TTN 7273 hgsc.bcm.edu 37 2 179591821 179591821 + Silent SNP T T C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f UPK3A 7380 hgsc.bcm.edu 37 22 45691552 45691553 + Frame_Shift_Ins INS - - C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f VHL 7428 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 10183776 10183776 + Missense_Mutation SNP G G C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G G C G G Unknown Valid Somatic Phase_I WXS 454;Illumina Miseq Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f VPS13C 54832 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 62352506 62352506 + Missense_Mutation SNP T T C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f WDR67 93594 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 8 124138304 124138304 + Missense_Mutation SNP T T A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f ZFP90 146198 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 68598080 68598080 + Missense_Mutation SNP G G A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f DNAH7 56171 broad.mit.edu 37 2 196720578 196720578 + Missense_Mutation SNP G A A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f FAT3 120114 broad.mit.edu 37 11 92616488 92616488 + Missense_Mutation SNP T C C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f GPC5 2262 broad.mit.edu 37 13 92051340 92051340 + Missense_Mutation SNP C T T rs183780526 by1000genomes TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f KIAA0427 0 broad.mit.edu 37 18 46284644 46284644 + Silent SNP A C C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f KIAA1199 57214 broad.mit.edu 37 15 81166242 81166242 + Missense_Mutation SNP G A A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f KRTAP4-9 100132386 broad.mit.edu 37 17 39261882 39261882 + Missense_Mutation SNP G A A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f LOC200030 0 broad.mit.edu 37 1 148017563 148017563 + Silent SNP A G G novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f PIK3R6 146850 broad.mit.edu 37 17 8738616 8738616 + Missense_Mutation SNP C A A novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f PTPN18 26469 broad.mit.edu 37 2 131129929 131129934 + In_Frame_Del DEL GACGGG - - rs112040677 bycluster;by1000genomes TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 GACGGG GACGGG . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f SETBP1 26040 broad.mit.edu 37 18 42281379 42281379 + Missense_Mutation SNP C G G novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f SETBP1 26040 broad.mit.edu 37 18 42281380 42281380 + Silent SNP C G G novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f Unknown 0 broad.mit.edu 37 6 25261582 25261582 + RNA DEL T - - novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f WNK2 65268 broad.mit.edu 37 9 96070760 96070760 + Missense_Mutation SNP T C C novel TCGA-CZ-4853-01A-01D-1429-08 TCGA-CZ-4853-11A-01D-1429-08 T T T C T T Unknown Valid Somatic Phase_I WXS 454 Illumina GAIIx bdef62d1-a036-43b4-811b-bf4beab7eca8 32e7b838-5d52-4880-8d59-f19e54cd177f