Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCA6 23460 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 67124896 67124896 + Missense_Mutation SNP G G T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f AGBL2 79841 broad.mit.edu;ucsc.edu 37 11 47713657 47713657 + Silent SNP T C C novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f AHCYL2 23382 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 129045730 129045730 + Missense_Mutation SNP G G A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f APBB3 10307 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 139942267 139942267 + Missense_Mutation SNP C C T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f APC 324 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 112178912 112178912 + Missense_Mutation SNP A A G novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 A A A G A A Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f APOBEC3B 9582 broad.mit.edu;hgsc.bcm.edu 37 22 39380188 39380188 + Silent SNP G G A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f ARL6IP6 151188 hgsc.bcm.edu;ucsc.edu 37 2 153591619 153591620 + Frame_Shift_Del DEL CT CT - novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 CT CT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f AVIL 10677 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 58201174 58201174 + Missense_Mutation SNP C C G novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f C11orf41 0 broad.mit.edu;ucsc.edu 37 11 33628343 33628343 + Missense_Mutation SNP A G G novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f C22orf30 0 hgsc.bcm.edu;ucsc.edu 37 22 32109361 32109361 + Frame_Shift_Del DEL A A - novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f C4orf47 441054 hgsc.bcm.edu 37 4 186366125 186366125 + Missense_Mutation SNP G G C novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f C4orf47 441054 hgsc.bcm.edu;ucsc.edu 37 4 186366122 186366123 + Frame_Shift_Del DEL GT GT - novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 GT GT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f CABIN1 23523 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 24456572 24456572 + Silent SNP C C T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f CAV3 859 broad.mit.edu;ucsc.edu 37 3 8787538 8787538 + Silent SNP G A A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f CCDC158 339965 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 4 77292666 77292666 + Missense_Mutation SNP T T G novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f CCNB2 9133 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 59408907 59408907 + Nonsense_Mutation SNP A A T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 A A A T A A Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f CDC20 991 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 43825663 43825663 + Missense_Mutation SNP C C T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f CLSTN3 9746 broad.mit.edu;ucsc.edu 37 12 7295478 7295478 + Silent SNP G T T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f DBN1 1627 broad.mit.edu;ucsc.edu 37 5 176894265 176894265 + Missense_Mutation SNP C A A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f DDX24 57062 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 94519372 94519372 + Silent SNP C C T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f DIS3 22894 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 13 73347935 73347935 + Missense_Mutation SNP C C G novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f DNM1L 10059 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 32886681 32886681 + Silent SNP T T C novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f DOCK2 1794 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 169474616 169474616 + Missense_Mutation SNP C C T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f DSEL 92126 broad.mit.edu;ucsc.edu 37 18 65180323 65180323 + Nonsense_Mutation SNP G C C novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f HRNR 388697 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 152191542 152191542 + Missense_Mutation SNP C C T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f ITGA7 3679 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 56096858 56096858 + Missense_Mutation SNP T T C novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f KDM5B 10765 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 202733213 202733213 + Missense_Mutation SNP G G A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f KIAA1009 22832 hgsc.bcm.edu 37 6 84896316 84896316 + Missense_Mutation SNP C C T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f KIF14 9928 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 200587085 200587085 + Missense_Mutation SNP T T C novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f MDN1 23195 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 90358035 90358035 + Missense_Mutation SNP G G C novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f METTL7B 196410 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 56076036 56076036 + Silent SNP G G A rs144071589 TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f MFSD2A 84879 broad.mit.edu;ucsc.edu 37 1 40435189 40435189 + Missense_Mutation SNP C A A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f MFSD5 84975 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 53647588 53647588 + Silent SNP C C G novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C C G C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f MKRN3 7681 broad.mit.edu;ucsc.edu 37 15 23811842 23811842 + Missense_Mutation SNP C T T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f NUAK2 81788 broad.mit.edu;ucsc.edu 37 1 205290624 205290624 + Missense_Mutation SNP G A A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f OR11L1 391189 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 248004727 248004727 + Missense_Mutation SNP G G T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f PALM3 342979 broad.mit.edu;ucsc.edu 37 19 14165245 14165245 + Silent SNP C T T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f PBRM1 55193 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52643533 52643533 + Nonsense_Mutation SNP G G T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G G T G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f PCDHB1 29930 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 140432455 140432455 + Missense_Mutation SNP C C T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f PDGFRA 5156 broad.mit.edu;ucsc.edu 37 4 55155210 55155210 + Missense_Mutation SNP C G G novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f PRKACB 5567 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 84679863 84679863 + Missense_Mutation SNP G G T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f PRTG 283659 hgsc.bcm.edu;ucsc.edu 37 15 55931919 55931919 + Missense_Mutation SNP C C T rs144541725 by1000genomes TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f RABGEF1 27342 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 66260561 66260561 + Missense_Mutation SNP A A T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f RANBP2 5903 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 109381095 109381095 + Missense_Mutation SNP C C T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f RECK 8434 hgsc.bcm.edu;ucsc.edu 37 9 36091316 36091317 + Frame_Shift_Ins INS - - T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f SAMD4A 23034 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 55203899 55203899 + Silent SNP G G A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f SLC22A7 10864 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 43272449 43272449 + Nonsense_Mutation SNP C C T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f SLC22A9 114571 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 63175623 63175623 + Nonsense_Mutation SNP T T A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f SLC24A3 57419 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 19665938 19665938 + Missense_Mutation SNP G G C novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f SLC25A14 9016 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 129483276 129483276 + Silent SNP G G T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f SLC35A3 23443 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 100472612 100472612 + Missense_Mutation SNP T T C novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f SLC4A8 9498 broad.mit.edu;ucsc.edu 37 12 51897852 51897852 + Missense_Mutation SNP C A A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f SLC9A3 6550 broad.mit.edu;ucsc.edu 37 5 475720 475720 + Missense_Mutation SNP A T T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f STAG2 10735 hgsc.bcm.edu;ucsc.edu 37 X 123195628 123195629 + Frame_Shift_Del DEL AG AG - novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 AG AG AG - AG AG Unknown Valid Somatic Phase_I WXS PGM Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f SUN1 23353 broad.mit.edu;ucsc.edu 37 7 905604 905604 + Missense_Mutation SNP G T T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f TMEM229A 730130 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 123672748 123672748 + Frame_Shift_Del DEL G G - novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f TMEM25 84866 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 118404209 118404209 + Missense_Mutation SNP G G T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f TNFAIP3 7128 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 138201233 138201233 + Silent SNP C C T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C C T C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f VHL 7428 hgsc.bcm.edu 37 3 10183781 10183782 + Frame_Shift_Ins INS - - T novel TCGA-CZ-5466-01A-01W-1528-10 TCGA-CZ-5466-11A-01W-1529-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina MiSeq fa54a534-2a32-474c-8f7b-e38400f0e17b 8f2f6551-1769-408d-8c13-50f6d6ff45d5 YWHAB 7529 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 20 43533772 43533772 + Silent SNP G G A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f ZBTB44 29068 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 130131008 130131008 + Nonsense_Mutation SNP A A T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f ZFP112 7771 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 44840845 44840845 + Missense_Mutation SNP T T G novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f ZNF426 79088 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 9643586 9643586 + Missense_Mutation SNP T T G novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f ZNF609 23060 broad.mit.edu;ucsc.edu 37 15 64967175 64967175 + Missense_Mutation SNP C G G novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f ZUFSP 221302 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 116981933 116981933 + Silent SNP A A C novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f ABCA6 23460 broad.mit.edu 37 17 67124895 67124895 + Silent SNP G T T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f HSPA8 3312 broad.mit.edu 37 11 122930276 122930276 + Missense_Mutation SNP C G G novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f KIF1C 10749 broad.mit.edu 37 17 4924146 4924146 + Silent SNP C T T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f LOC152024 0 broad.mit.edu 37 3 24138196 24138196 + RNA DEL T - - novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f LOC646214 646214 broad.mit.edu 37 15 21935217 21935221 + RNA DEL AAAAC - - rs138804430 by1000genomes TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 AAAAC AAAAC . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f MIR299 407023 broad.mit.edu 37 14 101490139 101490139 + RNA SNP G A A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f MST1P2 11209 broad.mit.edu 37 1 16975030 16975030 + RNA SNP G A A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f MUC4 4585 broad.mit.edu 37 3 195509939 195509939 + Missense_Mutation SNP G T T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f NOMO2 283820 broad.mit.edu 37 16 18573208 18573208 + Missense_Mutation SNP G C C novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f PRIC285 0 broad.mit.edu 37 20 62192230 62192230 + Missense_Mutation SNP C A A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f RANBP2 5903 broad.mit.edu 37 2 109383602 109383602 + Missense_Mutation SNP G A A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f RANBP2 5903 broad.mit.edu 37 2 109383603 109383603 + Missense_Mutation SNP C T T novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f RANBP2 5903 broad.mit.edu 37 2 109383605 109383605 + Missense_Mutation SNP G A A novel TCGA-CZ-5466-01A-01D-1501-10 TCGA-CZ-5466-11A-01D-1501-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx a486ba5e-9159-4b88-9c08-1db2d861ae5a fd4d5274-674a-4cc7-acc9-355d73b1382f