Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ASPM 259266 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 197060067 197060067 + Missense_Mutation SNP C C G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 ATP13A4 84239 broad.mit.edu;hgsc.bcm.edu 37 3 193120483 193120483 + Silent SNP A A G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 BAP1 8314 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 52439876 52439876 + Nonsense_Mutation SNP G G T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G G T G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 BCAS2 10286 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 115123970 115123970 + Missense_Mutation SNP T T G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 C14orf177 283598 hgsc.bcm.edu 37 14 99182527 99182535 + Frame_Shift_Del DEL GGATGCATC GGATGCATC - rs139827156 bycluster;by1000genomes TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 GGATGCATC GGATGCATC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 C22orf30 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 22 32108234 32108234 + Missense_Mutation SNP C C T rs143043548 bycluster;byfrequency;by1000genomes TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 C5orf42 65250 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 37226660 37226660 + Missense_Mutation SNP C C G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 CCDC47 57003 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 61829787 61829787 + Missense_Mutation SNP G G A novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 CDKN2A 1029 hgsc.bcm.edu 37 9 21970901 21970901 + Missense_Mutation SNP C C T rs45476696 bycluster TCGA-BP-4163-01A-02W-1382-10 TCGA-BP-4163-11A-01W-1244-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina MiSeq 03533768-49b2-4a13-bf8a-cddce7e8aa43 0c0c2e5a-75e4-4968-8e2a-3a6da1cabcc6 CENPE 1062 broad.mit.edu;ucsc.edu 37 4 104061981 104061981 + Missense_Mutation SNP G A A novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 DNAH17 8632 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 76496393 76496393 + Silent SNP G G A novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 DNAJC17 55192 broad.mit.edu;hgsc.bcm.edu 37 15 41065992 41065992 + Missense_Mutation SNP A A T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 FAT3 120114 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 92577387 92577387 + Silent SNP G G T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 G6PC 2538 hgsc.bcm.edu;ucsc.edu 37 17 41062994 41062995 + Frame_Shift_Del INS - - A novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 HEATR3 55027 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 50120249 50120249 + Silent SNP T T G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 HLA-DQB1 3119 hgsc.bcm.edu;ucsc.edu 37 6 32629137 32629137 + Silent SNP T T G rs1140343 bycluster;byfrequency;by1000genomes TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 IFI30 10437 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 18286140 18286140 + Missense_Mutation SNP G G C novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 IVD 3712 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 40707145 40707145 + Missense_Mutation SNP A A T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 KDM4A 9682 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 44154664 44154664 + Missense_Mutation SNP G G C novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 KRT15 3866 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 39673185 39673185 + Missense_Mutation SNP C C T rs138271368 TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 LAMB4 22798 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 7 107717486 107717486 + Missense_Mutation SNP A A T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 LRRK1 79705 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 101601457 101601457 + Silent SNP G G A novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G G A G G Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 MAP1A 4130 broad.mit.edu 37 15 43818938 43818938 + Missense_Mutation SNP A G G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 MLX 6945 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 40721610 40721610 + Silent SNP A A G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 MPV17L 255027 broad.mit.edu;hgsc.bcm.edu 37 16 15501819 15501819 + Missense_Mutation SNP A A G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 MRPL9 65005 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 1 151732588 151732588 + Missense_Mutation SNP A A T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 MRPS7 51081 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 73258639 73258639 + Missense_Mutation SNP G G C novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 MUC4 4585 broad.mit.edu 37 3 195505855 195505855 + Missense_Mutation SNP G T T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 NFRKB 4798 broad.mit.edu;hgsc.bcm.edu 37 11 129754640 129754640 + Missense_Mutation SNP C C T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 NIPBL 25836 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 37022178 37022178 + Missense_Mutation SNP C C G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C C G C C Unknown Valid Somatic Phase_I WXS 454 Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 OR14A16 284532 hgsc.bcm.edu 37 1 247978544 247978544 + Missense_Mutation SNP G G A rs113112592 TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 OR1D4 653166 broad.mit.edu 37 17 2966855 2966855 + Missense_Mutation SNP C T T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 OR56A4 120793 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 6023936 6023936 + Missense_Mutation SNP C C G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 OTOL1 131149 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 161221212 161221212 + Missense_Mutation SNP C C A novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 PCNX 22990 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 71571970 71571970 + Silent SNP A A T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 PDIA3P 171423 broad.mit.edu 37 1 146649788 146649788 + Missense_Mutation SNP C G G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 PHKA1 5255 broad.mit.edu 37 X 71933736 71933736 + Translation_Start_Site SNP C T T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 PKD2L2 27039 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 137228267 137228267 + Missense_Mutation SNP T T G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 PLIN4 729359 hgsc.bcm.edu 37 19 4511479 4511479 + Silent SNP A A T rs138464610 by1000genomes;alternate_allele TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 PLS3 5358 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 114864223 114864223 + Silent SNP A A G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 PSMA3 5684 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 58737146 58737146 + Missense_Mutation SNP G G A novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 RAB8B 51762 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 63555808 63555808 + Missense_Mutation SNP C C T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 RALGAPA1 253959 hgsc.bcm.edu 37 14 36140605 36140611 + Frame_Shift_Del DEL GCTGAAG GCTGAAG - novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 GCTGAAG GCTGAAG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 RARA 5914 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 38508302 38508302 + Missense_Mutation SNP C C A novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 RIC8A 60626 hgsc.bcm.edu 37 11 209895 209897 + In_Frame_Del DEL CCC CCC - rs146124857 bycluster;by1000genomes TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 CCC CCC . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 SHARPIN 81858 broad.mit.edu;ucsc.edu 37 8 145154959 145154959 + Missense_Mutation SNP G C C novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 SLC25A45 283130 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 65144051 65144051 + Missense_Mutation SNP C C T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 STEAP1 26872 broad.mit.edu 37 7 89790291 89790291 + Missense_Mutation SNP T C C novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 SULT2B1 6820 broad.mit.edu;ucsc.edu 37 19 49096055 49096055 + Silent SNP C G G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 SYTL3 94120 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 159184435 159184435 + Silent SNP C C A rs140709967 byfrequency;alternate_allele TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 TDG 6996 hgsc.bcm.edu 37 12 104376608 104376608 + Silent SNP G G A rs61937629 bycluster;byfrequency TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 TENC1 23371 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 53448982 53448982 + Missense_Mutation SNP T T G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 TEX264 51368 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 51708346 51708346 + Missense_Mutation SNP T T A novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 TH1L 51497 hgsc.bcm.edu;ucsc.edu 37 20 57567073 57567076 + Frame_Shift_Del DEL TAGG TAGG - novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 TAGG TAGG . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 THAP6 152815 hgsc.bcm.edu;ucsc.edu 37 4 76440718 76440721 + Frame_Shift_Del DEL AGTT AGTT - novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 AGTT AGTT . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 THUMPD2 80745 hgsc.bcm.edu;ucsc.edu 37 2 39993264 39993264 + RNA SNP A A G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 TMEM111 0 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 10005822 10005822 + Silent SNP T T C novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 TOPBP1 11073 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 133362056 133362056 + Missense_Mutation SNP A A T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 TSC22D4 81628 broad.mit.edu;ucsc.edu 37 7 100065183 100065183 + Missense_Mutation SNP G T T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 WASH2P 375260 broad.mit.edu 37 2 114356198 114356198 + Missense_Mutation SNP G A A novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 WDR35 57539 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 20153652 20153652 + Missense_Mutation SNP T T C novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 T T . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 ZFHX3 463 hgsc.bcm.edu 37 16 72992626 72992626 + Silent SNP C C T novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 ZIK1 284307 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 58101848 58101848 + Missense_Mutation SNP A A C novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242 ZNF879 345462 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 5 178459395 178459395 + Missense_Mutation SNP A A G novel TCGA-BP-4163-01A-02D-1386-10 TCGA-BP-4163-11A-01D-1251-10 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 6c16047c-68f3-4023-bc90-6d54cad76b07 96e16b66-2582-47e7-a107-858bf7cbf242