Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ABCB7 22 hgsc.bcm.edu;ucsc.edu 37 X 74290344 74290344 + Silent SNP A A C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a ALAS2 212 hgsc.bcm.edu;ucsc.edu 37 X 55051164 55051164 + Missense_Mutation SNP C C G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a AQR 9716 hgsc.bcm.edu;ucsc.edu 37 15 35174721 35174721 + Missense_Mutation SNP C C G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a ARHGEF17 9828 hgsc.bcm.edu 37 11 73021667 73021667 + Missense_Mutation SNP C C A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a ASMTL 8623 hgsc.bcm.edu 37 X 1537881 1537881 + Missense_Mutation SNP C C T rs4503285 bycluster;byfrequency;by1000genomes TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a ATP6AP1 537 hgsc.bcm.edu 37 X 153662580 153662580 + Silent SNP C C T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a BAP1 8314 hgsc.bcm.edu 37 3 52440367 52440367 + Missense_Mutation SNP T T G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 T T T G T T Unknown Valid Somatic Phase_I WXS 454 SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a BDP1 55814 hgsc.bcm.edu;ucsc.edu 37 5 70806004 70806004 + Missense_Mutation SNP A A G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a C6orf103 0 hgsc.bcm.edu;ucsc.edu 37 6 147022203 147022203 + Silent SNP T T C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a CACNA1A 773 hgsc.bcm.edu 37 19 13366050 13366050 + Silent SNP G G T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a CACNA1A 773 hgsc.bcm.edu;ucsc.edu 37 19 13414666 13414666 + Missense_Mutation SNP C C A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a CACNG3 10368 hgsc.bcm.edu;ucsc.edu 37 16 24268095 24268095 + Missense_Mutation SNP G G A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a CDK9 1025 hgsc.bcm.edu 37 9 130548496 130548496 + Silent SNP C C G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a CREB3L1 90993 hgsc.bcm.edu 37 11 46332690 46332690 + Missense_Mutation SNP G G C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a CSRNP1 64651 hgsc.bcm.edu 37 3 39184799 39184799 + Missense_Mutation SNP T T A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a CSTF3 1479 hgsc.bcm.edu;ucsc.edu 37 11 33127147 33127147 + Missense_Mutation SNP T T G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a CWH43 80157 hgsc.bcm.edu;ucsc.edu 37 4 49034691 49034691 + Silent SNP C C T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a CYFIP1 23191 hgsc.bcm.edu;ucsc.edu 37 15 22956552 22956552 + Nonsense_Mutation SNP C C T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a DIDO1 11083 hgsc.bcm.edu;ucsc.edu 37 20 61527636 61527636 + Silent SNP G G A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a DTWD1 56986 hgsc.bcm.edu;ucsc.edu 37 15 49917573 49917573 + Missense_Mutation SNP A A C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a FAM21A 387680 hgsc.bcm.edu 37 10 51863872 51863872 + Missense_Mutation SNP T T C rs2490899 TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a FAM3D 131177 hgsc.bcm.edu;ucsc.edu 37 3 58620032 58620032 + Missense_Mutation SNP C C T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a FAM46A 55603 hgsc.bcm.edu;ucsc.edu 37 6 82459989 82459989 + Missense_Mutation SNP A A G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a FRS2 10818 hgsc.bcm.edu;ucsc.edu 37 12 69965176 69965176 + Missense_Mutation SNP C C A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a FYCO1 79443 hgsc.bcm.edu 37 3 46001032 46001032 + Missense_Mutation SNP T T C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a GABRG3 2567 hgsc.bcm.edu;ucsc.edu 37 15 27772598 27772598 + Silent SNP C C T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a GCM1 8521 hgsc.bcm.edu 37 6 52995691 52995691 + Missense_Mutation SNP C C G rs76623467 byfrequency;by1000genomes;alternate_allele TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a GLIPR1L2 144321 hgsc.bcm.edu 37 12 75816814 75816815 + In_Frame_Ins INS - - ACA novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 - - . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a GOLGA2 2801 hgsc.bcm.edu 37 9 131019438 131019438 + Missense_Mutation SNP G G A rs113640242 bycluster TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a HCFC1 3054 hgsc.bcm.edu 37 X 153215992 153215992 + Missense_Mutation SNP A A T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a HHAT 55733 hgsc.bcm.edu 37 1 210761285 210761285 + Missense_Mutation SNP G G T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a HIST1H4H 8365 hgsc.bcm.edu;ucsc.edu 37 6 26285450 26285450 + Missense_Mutation SNP C C T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a HMG20A 10363 hgsc.bcm.edu;ucsc.edu 37 15 77771582 77771582 + Missense_Mutation SNP T T G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a HOXC4 3221 hgsc.bcm.edu 37 12 54448106 54448106 + Missense_Mutation SNP A A G rs75256744 bycluster;byfrequency;by1000genomes TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a HUWE1 10075 hgsc.bcm.edu;ucsc.edu 37 X 53585980 53585980 + Missense_Mutation SNP C C T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C C T C C Unknown Valid Somatic Phase_I WXS 454 SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a IFNAR1 3454 hgsc.bcm.edu;ucsc.edu 37 21 34713364 34713364 + Missense_Mutation SNP G G A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a IMPA2 3613 hgsc.bcm.edu;ucsc.edu 37 18 12030440 12030440 + Missense_Mutation SNP C C T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a INTS7 25896 hgsc.bcm.edu 37 1 212161322 212161322 + Missense_Mutation SNP C C G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a ITGA8 8516 hgsc.bcm.edu;ucsc.edu 37 10 15714684 15714684 + Silent SNP C C T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a JRKL 8690 hgsc.bcm.edu;ucsc.edu 37 11 96124291 96124291 + Missense_Mutation SNP C C G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a KDM2A 22992 hgsc.bcm.edu;ucsc.edu 37 11 67021798 67021798 + Missense_Mutation SNP T T G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a KIAA2018 205717 hgsc.bcm.edu;ucsc.edu 37 3 113377605 113377605 + Missense_Mutation SNP T T C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a KLHL24 54800 hgsc.bcm.edu;ucsc.edu 37 3 183368567 183368567 + Missense_Mutation SNP G G C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a KRTAP7-1 337878 hgsc.bcm.edu 37 21 32201969 32201969 + Frame_Shift_Del DEL G G - novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a LCT 3938 hgsc.bcm.edu;ucsc.edu 37 2 136566271 136566271 + Missense_Mutation SNP G G C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a LONP2 83752 hgsc.bcm.edu;ucsc.edu 37 16 48311325 48311325 + Missense_Mutation SNP C C G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a LRIG2 9860 hgsc.bcm.edu;ucsc.edu 37 1 113652931 113652931 + Silent SNP G G A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a LRRK1 79705 hgsc.bcm.edu;ucsc.edu 37 15 101569276 101569276 + Missense_Mutation SNP C C G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C C G C C Unknown Valid Somatic Phase_I WXS 454 SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a MACF1 23499 hgsc.bcm.edu;ucsc.edu 37 1 39889851 39889851 + Missense_Mutation SNP G G T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G G T G G Unknown Valid Somatic Phase_I WXS 454 SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a MICAL1 64780 hgsc.bcm.edu;ucsc.edu 37 6 109771217 109771217 + Missense_Mutation SNP C C A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a MTHFSD 64779 hgsc.bcm.edu;ucsc.edu 37 16 86585687 86585687 + Missense_Mutation SNP T T A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a MYH6 4624 hgsc.bcm.edu 37 14 23855332 23855332 + Missense_Mutation SNP C C G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a MYO1F 4542 hgsc.bcm.edu 37 19 8612963 8612963 + Missense_Mutation SNP T T A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a MYST4 0 hgsc.bcm.edu;ucsc.edu 37 10 76788380 76788380 + Missense_Mutation SNP G G C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G G C G G Unknown Valid Somatic Phase_I WXS 454 SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a NCAM2 4685 hgsc.bcm.edu;ucsc.edu 37 21 22652947 22652947 + Silent SNP A A G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a NEK3 4752 hgsc.bcm.edu;ucsc.edu 37 13 52707349 52707349 + Nonsense_Mutation SNP C C A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a NOS1 4842 hgsc.bcm.edu;ucsc.edu 37 12 117710228 117710228 + Missense_Mutation SNP G G A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a NRXN3 9369 hgsc.bcm.edu 37 14 80130119 80130119 + Splice_Site SNP A A G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a OPLAH 26873 hgsc.bcm.edu 37 8 145107992 145107992 + Missense_Mutation SNP A A C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a PADI6 353238 hgsc.bcm.edu;ucsc.edu 37 1 17708507 17708507 + Missense_Mutation SNP G G T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G G T G G Unknown Valid Somatic Phase_I WXS 454 SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a PCSK9 255738 hgsc.bcm.edu 37 1 55512295 55512295 + Missense_Mutation SNP C C G rs137878146 alternate_allele TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a PIK3CA 5290 hgsc.bcm.edu;ucsc.edu 37 3 178916854 178916854 + Missense_Mutation SNP G G A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G G A G G Unknown Valid Somatic Phase_I WXS 454 SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a PITRM1 10531 hgsc.bcm.edu 37 10 3187802 3187802 + Missense_Mutation SNP G G T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a PLG 5340 hgsc.bcm.edu;ucsc.edu 37 6 161135849 161135849 + Nonsense_Mutation SNP G G T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a PODNL1 79883 hgsc.bcm.edu 37 19 14046562 14046562 + Missense_Mutation SNP G G C rs151337979 alternate_allele TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a POLE2 5427 hgsc.bcm.edu;ucsc.edu 37 14 50131848 50131848 + Missense_Mutation SNP C C G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a PPM1J 333926 hgsc.bcm.edu 37 1 113252813 113252813 + Missense_Mutation SNP G G C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a PREP 5550 hgsc.bcm.edu 37 6 105800846 105800846 + Splice_Site SNP C C T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a RAB40C 57799 hgsc.bcm.edu 37 16 675459 675459 + Missense_Mutation SNP A A G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a RAB5A 5868 hgsc.bcm.edu;ucsc.edu 37 3 20017171 20017171 + Missense_Mutation SNP G G A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a RNASE1 6035 hgsc.bcm.edu 37 14 21270086 21270086 + Missense_Mutation SNP T T G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a RNASE9 390443 hgsc.bcm.edu;ucsc.edu 37 14 21024785 21024785 + Silent SNP A A G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a RYR2 6262 hgsc.bcm.edu;ucsc.edu 37 1 237801753 237801753 + Missense_Mutation SNP A A G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a SDK1 221935 hgsc.bcm.edu;ucsc.edu 37 7 3678698 3678698 + Missense_Mutation SNP G G C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a SGPL1 8879 hgsc.bcm.edu;ucsc.edu 37 10 72610956 72610956 + Missense_Mutation SNP A A G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a SLC14A2 8170 hgsc.bcm.edu;ucsc.edu 37 18 43249307 43249307 + Silent SNP C C T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a SLC15A4 121260 hgsc.bcm.edu;ucsc.edu 37 12 129278856 129278856 + Missense_Mutation SNP G G A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a SPATA17 128153 hgsc.bcm.edu;ucsc.edu 37 1 217955528 217955528 + Missense_Mutation SNP G G A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a SRSF5 6430 hgsc.bcm.edu;ucsc.edu 37 14 70234985 70234985 + Missense_Mutation SNP G G C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a STK11IP 114790 hgsc.bcm.edu 37 2 220478482 220478482 + Missense_Mutation SNP C C T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a TACC1 6867 hgsc.bcm.edu;ucsc.edu 37 8 38704295 38704295 + Missense_Mutation SNP G G T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a TAF1C 9013 hgsc.bcm.edu;ucsc.edu 37 16 84216708 84216708 + Missense_Mutation SNP C C G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a TMC3 342125 hgsc.bcm.edu;ucsc.edu 37 15 81644159 81644159 + Missense_Mutation SNP A A G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a TMC5 79838 hgsc.bcm.edu;ucsc.edu 37 16 19451434 19451434 + Missense_Mutation SNP G G A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a TMEM206 55248 hgsc.bcm.edu 37 1 212548582 212548582 + Missense_Mutation SNP A A G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a TNR 7143 hgsc.bcm.edu 37 1 175355249 175355249 + Missense_Mutation SNP G G T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a TTF1 7270 hgsc.bcm.edu 37 9 135277682 135277682 + Missense_Mutation SNP G G A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a TTLL4 9654 hgsc.bcm.edu;ucsc.edu 37 2 219618334 219618334 + Missense_Mutation SNP A A G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a TUBA3D 113457 hgsc.bcm.edu 37 2 132237983 132237983 + Silent SNP A A G rs71347110 bycluster TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a UBA7 7318 hgsc.bcm.edu 37 3 49850746 49850746 + Missense_Mutation SNP T T C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a VGLL3 389136 hgsc.bcm.edu;ucsc.edu 37 3 87027696 87027696 + Missense_Mutation SNP C C A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a ZBTB38 253461 hgsc.bcm.edu;ucsc.edu 37 3 141163202 141163202 + Nonsense_Mutation SNP G G T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a ZFP36L1 677 hgsc.bcm.edu;ucsc.edu 37 14 69257206 69257207 + Frame_Shift_Ins INS - - A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 - - . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a ZNF323 0 hgsc.bcm.edu;ucsc.edu 37 6 28293947 28293947 + Missense_Mutation SNP G G A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a ZNF572 137209 hgsc.bcm.edu;ucsc.edu 37 8 125990031 125990031 + Missense_Mutation SNP G G T novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a ZNF642 0 hgsc.bcm.edu;ucsc.edu 37 1 40954792 40954792 + Missense_Mutation SNP C C G novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a ZNF711 7552 hgsc.bcm.edu 37 X 84526278 84526278 + Missense_Mutation SNP T T C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a ZNF781 163115 hgsc.bcm.edu;ucsc.edu 37 19 38160410 38160410 + Missense_Mutation SNP G G A novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a ZNF821 55565 hgsc.bcm.edu 37 16 71893982 71893982 + Missense_Mutation SNP A A C novel TCGA-BP-4352-01A-01D-1366-10 TCGA-BP-4352-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID b976a492-5792-42d3-bec3-5bbb7292cac5 9461b657-9b8f-4cf6-a0eb-27cb3ae9923a