Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ACOX2 8309 hgsc.bcm.edu 37 3 58512375 58512375 + Silent SNP T T C rs1127743 bycluster;byfrequency;by1000genomes TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 ACTRT1 139741 hgsc.bcm.edu;ucsc.edu 37 X 127185831 127185831 + Nonsense_Mutation SNP G G A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 AGL 178 hgsc.bcm.edu;ucsc.edu 37 1 100343224 100343225 + Frame_Shift_Ins INS - - TA novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 - - . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 AKR1B1 231 hgsc.bcm.edu 37 7 134136494 134136494 + Silent SNP C C A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 ARHGAP8 23779 hgsc.bcm.edu 37 22 45255656 45255656 + Missense_Mutation SNP G G T rs148303608 alternate_allele TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 ASB8 140461 hgsc.bcm.edu;ucsc.edu 37 12 48547222 48547222 + Missense_Mutation SNP C C T novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 BIRC2 329 hgsc.bcm.edu;ucsc.edu 37 11 102239263 102239263 + Silent SNP T T C novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 C3orf75 0 hgsc.bcm.edu;ucsc.edu 37 3 47551730 47551730 + Missense_Mutation SNP A A G novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 CACNA1S 779 hgsc.bcm.edu 37 1 201058500 201058500 + Silent SNP C C A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 CCBP2 1238 hgsc.bcm.edu;ucsc.edu 37 3 42906057 42906057 + Missense_Mutation SNP C C G novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 CCDC57 284001 hgsc.bcm.edu 37 17 80130525 80130525 + Missense_Mutation SNP G G A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 CLCN5 1184 hgsc.bcm.edu;ucsc.edu 37 X 49853520 49853520 + Missense_Mutation SNP G G A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 CLIP1 6249 hgsc.bcm.edu;ucsc.edu 37 12 122812845 122812845 + Missense_Mutation SNP T T A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 DHRS2 10202 hgsc.bcm.edu 37 14 24108525 24108525 + Missense_Mutation SNP A A G novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 DPM2 8818 hgsc.bcm.edu;ucsc.edu 37 9 130698858 130698858 + Missense_Mutation SNP G G A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 EDNRA 1909 hgsc.bcm.edu;ucsc.edu 37 4 148463689 148463689 + Silent SNP C C T novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 EHBP1 23301 hgsc.bcm.edu;ucsc.edu 37 2 63175596 63175596 + Missense_Mutation SNP G G A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 GOLGB1 2804 hgsc.bcm.edu;ucsc.edu 37 3 121415214 121415214 + Missense_Mutation SNP T T A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 GRB7 2886 hgsc.bcm.edu 37 17 37903011 37903011 + Missense_Mutation SNP A A C novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 GRLF1 0 hgsc.bcm.edu;ucsc.edu 37 19 47424564 47424564 + Missense_Mutation SNP C C A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 IFT172 26160 hgsc.bcm.edu;ucsc.edu 37 2 27671791 27671791 + Silent SNP A A G novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 KRT4 3851 hgsc.bcm.edu 37 12 53207576 53207576 + Missense_Mutation SNP A A T novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 KRT76 51350 hgsc.bcm.edu 37 12 53162773 53162773 + Silent SNP A A G rs1464423 bycluster;byfrequency;by2hit2allele;by1000genomes TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 MAGI3 260425 hgsc.bcm.edu;ucsc.edu 37 1 114157263 114157263 + Nonsense_Mutation SNP T T A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 MGEA5 10724 hgsc.bcm.edu 37 10 103547234 103547234 + Missense_Mutation SNP G G T novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 MLL3 58508 hgsc.bcm.edu;ucsc.edu 37 7 151882665 151882665 + Nonsense_Mutation SNP G G T novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G G T G G Unknown Valid Somatic Phase_I WXS 454 SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 MSRB3 253827 hgsc.bcm.edu;ucsc.edu 37 12 65856991 65856991 + Missense_Mutation SNP A A T novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 MTHFD1 4522 hgsc.bcm.edu 37 14 64891605 64891605 + Missense_Mutation SNP G G T novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 MYST4 0 hgsc.bcm.edu;ucsc.edu 37 10 76788758 76788758 + Silent SNP A A G novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 A A A G A A Unknown Valid Somatic Phase_I WXS 454 SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 NFXL1 152518 hgsc.bcm.edu;ucsc.edu 37 4 47892656 47892656 + Missense_Mutation SNP T T G novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 ODZ4 0 hgsc.bcm.edu;ucsc.edu 37 11 78565192 78565192 + Silent SNP G G A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 OXER1 165140 hgsc.bcm.edu;ucsc.edu 37 2 42991163 42991163 + Missense_Mutation SNP A A G novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 PNLIPRP3 119548 hgsc.bcm.edu;ucsc.edu 37 10 118228715 118228715 + Missense_Mutation SNP T T C novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 POLL 27343 hgsc.bcm.edu;ucsc.edu 37 10 103345150 103345150 + Missense_Mutation SNP G G C novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 RAGE 0 hgsc.bcm.edu;ucsc.edu 37 14 102699021 102699021 + Missense_Mutation SNP A A C rs144699014 alternate_allele TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 A A . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 RANBP10 57610 hgsc.bcm.edu 37 16 67763369 67763369 + Missense_Mutation SNP C C T novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 RPH3AL 9501 hgsc.bcm.edu 37 17 171082 171082 + Silent SNP G G A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 SAGE1 55511 hgsc.bcm.edu;ucsc.edu 37 X 134992605 134992605 + Silent SNP G G A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 SECISBP2 79048 hgsc.bcm.edu 37 9 91964776 91964776 + Missense_Mutation SNP C C G novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 C C . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 SLC22A25 387601 hgsc.bcm.edu 37 11 62984813 62984813 + Missense_Mutation SNP G G A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 SLC25A19 60386 hgsc.bcm.edu 37 17 73279618 73279618 + Silent SNP G G A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 SLC35A4 113829 hgsc.bcm.edu 37 5 139946945 139946946 + Frame_Shift_Ins INS - - A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 - - . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 SLC37A3 84255 hgsc.bcm.edu;ucsc.edu 37 7 140035229 140035229 + Nonsense_Mutation SNP G G T novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 ST6GALNAC3 256435 hgsc.bcm.edu;ucsc.edu 37 1 77094396 77094396 + Missense_Mutation SNP G G A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 TG 7038 hgsc.bcm.edu 37 8 133941401 133941401 + Missense_Mutation SNP C C T novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 C C C T C C Unknown Valid Somatic Phase_I WXS 454 SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 TYK2 7297 hgsc.bcm.edu 37 19 10468470 10468470 + Missense_Mutation SNP C C G novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 C C C G C C Unknown Valid Somatic Phase_I WXS 454 SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 USP4 7375 hgsc.bcm.edu;ucsc.edu 37 3 49321434 49321434 + Silent SNP T T A novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 VSIG10 54621 hgsc.bcm.edu 37 12 118506355 118506355 + Missense_Mutation SNP T T C novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 T T . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42 ZSCAN2 54993 hgsc.bcm.edu 37 15 85164205 85164205 + Missense_Mutation SNP G G T novel TCGA-BP-4756-01A-01D-1366-10 TCGA-BP-4756-11A-01D-1366-10 G G . . . . Unknown Untested Somatic Phase_I WXS none SOLID 7ff2eeb7-4f50-4365-acca-4f67bc73fa38 7d113813-ebeb-4dfa-9fce-fa8f2aabab42