Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID AFF3 3899 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 100199360 100199360 + Missense_Mutation SNP G G T novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 BRPF3 27154 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 6 36198303 36198303 + Missense_Mutation SNP G G T novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 C3orf70 285382 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 3 184801263 184801263 + Missense_Mutation SNP A A C novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 C8orf44 56260 broad.mit.edu 37 8 67590120 67590120 + Silent SNP C A A novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 CCDC148 130940 broad.mit.edu;ucsc.edu 37 2 159312934 159312934 + Silent SNP A T T novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 CCDC22 28952 broad.mit.edu;hgsc.bcm.edu 37 X 49105114 49105114 + Silent SNP G G A rs138555929 byfrequency TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 CCDC88C 440193 broad.mit.edu;hgsc.bcm.edu 37 14 91755525 91755525 + Silent SNP G G A novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 CXorf66 347487 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 X 139040297 139040297 + Silent SNP G G A novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 GGA2 23062 hgsc.bcm.edu;ucsc.edu 37 16 23481417 23481417 + Frame_Shift_Del DEL C C - novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 HEATR5B 54497 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 2 37255866 37255866 + Missense_Mutation SNP G G A novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 HOXB1 3211 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 46607033 46607033 + Missense_Mutation SNP C C T novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 IL17RE 132014 broad.mit.edu 37 3 9957050 9957050 + Silent SNP C T T novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 KRT2 3849 broad.mit.edu;ucsc.edu 37 12 53045802 53045802 + Missense_Mutation SNP C T T novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 LBP 3929 hgsc.bcm.edu 37 20 36982823 36982823 + Missense_Mutation SNP A A G novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 MAP3K11 4296 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 65375920 65375920 + Splice_Site SNP C C A novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 NOTCH1 4851 broad.mit.edu 37 9 139400096 139400096 + Missense_Mutation SNP C T T novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 POLR2C 5432 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 57503112 57503112 + Silent SNP G G A novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 RGS6 9628 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 14 72925078 72925078 + Missense_Mutation SNP G G A novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 RNF10 9921 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 12 121004766 121004766 + Missense_Mutation SNP G G C novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 SLC28A2 9153 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 15 45559673 45559673 + Silent SNP C C A novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 SRL 6345 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 16 4247843 4247843 + Silent SNP G G A novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 TBCD 6904 broad.mit.edu 37 17 80863900 80863900 + Silent SNP C A A novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 TMEM132E 124842 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 17 32953491 32953491 + Missense_Mutation SNP C C T novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 VHL 7428 broad.mit.edu;ucsc.edu 37 3 10191642 10191643 + Frame_Shift_Del DEL GA - - novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 GA GA . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 VN1R2 317701 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 53762110 53762110 + Missense_Mutation SNP G G A novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 VN1R2 317701 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 19 53762116 53762116 + Missense_Mutation SNP A A T novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 A A . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 VPS35 55737 broad.mit.edu;hgsc.bcm.edu 37 16 46717480 46717480 + Missense_Mutation SNP C C G novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 WASH7P 653635 broad.mit.edu 37 1 14976 14976 + RNA SNP G A A rs77117975 byfrequency TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 G G . . . . Unknown Untested Somatic Phase_I WXS none Illumina GAIIx 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 WEE1 7465 broad.mit.edu;hgsc.bcm.edu;ucsc.edu 37 11 9610146 9610146 + Silent SNP C C T novel TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 C C . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26 ZNF772 400720 hgsc.bcm.edu 37 19 57988666 57988667 + In_Frame_Ins INS - - GCC rs34678661 bycluster;by1000genomes TCGA-BP-5194-01A-02D-1429-08 TCGA-BP-5194-11A-01D-1429-08 - - . . . . Unknown Untested Somatic Phase_I WXS none Illumina HiSeq 5b52c97e-fdd2-4ae2-b036-297feeb1c7e2 cc2ef7bc-8810-4162-b19a-65a940beac26