Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	TVarRat	NVarRat	dbSNP_Strength	dbSNP_AF	dbSNP_PopFreq	Confidence	Algorithm
LPPR5	0	hgsc.bcm.edu	hg19	1	99418655	99418655	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	.	NM_001010861	exon3	c.C592A	p.L198I	CACTGAGAGCTGC	.	97.0	4.0	96.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
SMG5	23381	hgsc.bcm.edu	hg19	1	156236156	156236156	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	SMG5	NM_015327	exon12	c.A1271G	p.K424R	GGTTCCTTGGACT	.	89.0	31.0	85.0	0.0	.	98	.	.	.	none	.	.	PASS	Atlas-SNP
POMC	5443	hgsc.bcm.edu	hg19	2	25387619	25387619	+	Missense_Mutation	SNP	C	C	T	rs146551109		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	POMC,NS,lymphoid_neoplasm,0,1	POMC	NM_001035256	exon3	c.G23A	p.R8H	CCCGAGCGGCTGC	.	98.0	27.0	63.0	0.0	.	33	.	.	.	weak	C|1.000;T|0.000	0.000	PASS	Atlas-SNP
BIRC6	57448	hgsc.bcm.edu	hg19	2	32656054	32656054	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	BIRC6	NM_016252	exon12	c.A3144C	p.E1048D	GGTAGAAGTTCAA	.	63.0	20.0	76.0	0.0	.	838	.	.	.	none	.	.	PASS	Atlas-SNP
NFE2L2	4780	hgsc.bcm.edu	hg19	2	178098956	178098956	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	NFE2L2,NS,carcinoma,0,5	NFE2L2	NM_006164	exon2	c.T89G	p.L30R	ACTCCAAGATCTA	.	66.0	7.0	62.0	0.0	.	225	.	.	.	none	.	.	PASS	Atlas-SNP
SSFA2	6744	hgsc.bcm.edu	hg19	2	182786760	182786760	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	SSFA2	NM_001130445	exon16	c.G3296C	p.G1099A	CTCCTGGAGAAAG	.	134.0	30.0	114.0	0.0	.	130	.	.	.	none	.	.	PASS	Atlas-SNP
ZFAND2B	130617	hgsc.bcm.edu	hg19	2	220072989	220072989	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	ZFAND2B,NS,carcinoma,-1,1	ZFAND2B	NM_138802	exon5	c.T446G	p.I149S	CTGCCATCTCCAG	.	54.0	18.0	40.0	0.0	.	28	.	.	.	none	.	.	PASS	Atlas-SNP
UGT1A3	54659	hgsc.bcm.edu	hg19	2	234637943	234637943	+	Silent	SNP	G	G	A	rs374045195		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	UGT1A3	NM_019093	exon1	c.G171A	p.Q57Q	CCACCAGGCAGTG	.	76.0	21.0	70.0	0.0	.	91	.	.	.	weak	.	.	PASS	Atlas-SNP
TCAIM	285343	hgsc.bcm.edu	hg19	3	44438258	44438258	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	C3orf23,NS,carcinoma,0,1	.	NM_173826	exon8	c.C817T	p.R273C	ACAGACCGTTCTG	.	128.0	55.0	91.0	0.0	.	.	.	.	.	none	.	.	PASS	Atlas-SNP
CCDC58	131076	hgsc.bcm.edu	hg19	3	122102042	122102042	+	Silent	SNP	A	A	G	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	CCDC58	NM_001017928	exon1	c.T30C	p.C10C	CTCCTCACAGTTC	.	125.0	14.0	96.0	0.0	.	14	.	.	.	none	.	.	PASS	Atlas-SNP
PIK3CB	5291	hgsc.bcm.edu	hg19	3	138409857	138409857	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	PIK3CB	NM_006219	exon13	c.T2021C	p.L674P	CAAAATAGAAACT	.	269.0	63.0	188.0	0.0	.	103	.	.	.	none	.	.	PASS	Atlas-SNP
PDE6B	5158	hgsc.bcm.edu	hg19	4	619837	619837	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	PDE6B	NM_001145291	exon1	c.A422C	p.H141P	TGGGCCACGTGGC	.	9.0	5.0	12.0	0.0	.	80	.	.	.	none	.	.	PASS	Atlas-SNP
CMYA5	202333	hgsc.bcm.edu	hg19	5	79032748	79032748	+	Silent	SNP	T	T	C	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	CMYA5_ENST00000446378,colon,carcinoma,0,2	CMYA5	NM_153610	exon2	c.T8160C	p.T2720T	GAAAACTAAGACT	.	26.0	3.0	38.0	0.0	.	643	.	.	.	none	.	.	PASS	Atlas-SNP
ALDH7A1	501	hgsc.bcm.edu	hg19	5	125930919	125930919	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	ALDH7A1	NM_001202404	exon1	c.T53C	p.L18P	AGCCCAAGGCCCT	.	5.0	4.0	1.0	0.0	.	57	.	.	.	none	.	.	PASS	Atlas-SNP
SCAND3	114821	hgsc.bcm.edu	hg19	6	28543371	28543371	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	SCAND3	NM_052923	exon3	c.G1111T	p.V371F	AACTAACTTCCTT	.	199.0	63.0	195.0	0.0	.	156	.	.	.	none	.	.	PASS	Atlas-SNP
INTS1	26173	hgsc.bcm.edu	hg19	7	1535858	1535858	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	INTS1	NM_001080453	exon12	c.A1645G	p.M549V	GCATCATGGACAC	.	136.0	35.0	93.0	0.0	.	145	.	.	.	none	.	.	PASS	Atlas-SNP
PTPRZ1	5803	hgsc.bcm.edu	hg19	7	121668665	121668665	+	Missense_Mutation	SNP	C	C	A	rs368834797	alternate_allele	TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	PTPRZ1	NM_002851	exon14	c.C5048A	p.S1683Y	TTATATCCACACC	.	173.0	11.0	132.0	0.0	.	605	.	.	.	alt	.	.	PASS	Atlas-SNP
SVEP1	79987	hgsc.bcm.edu	hg19	9	113259109	113259109	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	SVEP1	NM_153366	exon8	c.A1786G	p.N596D	CAGAGTTGTCTTT	.	12.0	4.0	4.0	0.0	.	326	.	.	.	none	.	.	PASS	Atlas-SNP
INTS5	80789	hgsc.bcm.edu	hg19	11	62417117	62417117	+	Silent	SNP	A	A	G	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	INTS5	NM_030628	exon2	c.T435C	p.S145S	CCATGCACTAATC	.	111.0	44.0	126.0	0.0	.	81	.	.	.	none	.	.	PASS	Atlas-SNP
ARAP1	116985	hgsc.bcm.edu	hg19	11	72423355	72423355	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	ARAP1	NM_001040118	exon7	c.T908C	p.L303S	AAGGACAAGCTCA	.	23.0	6.0	20.0	0.0	.	168	.	.	.	none	.	.	PASS	Atlas-SNP
ZW10	9183	hgsc.bcm.edu	hg19	11	113628545	113628545	+	Missense_Mutation	SNP	G	G	A	rs377079908		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	ZW10	NM_004724	exon7	c.C764T	p.P255L	GCCAGCGGCCTAA	.	65.0	19.0	73.0	0.0	.	49	.	.	.	weak	.	.	PASS	Atlas-SNP
AKAP6	9472	hgsc.bcm.edu	hg19	14	33204952	33204952	+	Missense_Mutation	SNP	T	T	A	rs201928179	by1000genomes;alternate_allele	TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	AKAP6	NM_004274	exon11	c.T3236A	p.L1079Q	GAAGCCTGGTAAG	.	77.0	26.0	92.0	0.0	.	308	.	.	.	alt	T|1.000;C|0.000	.	PASS	Atlas-SNP
DAAM1	23002	hgsc.bcm.edu	hg19	14	59791109	59791109	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	DAAM1	NM_001270520	exon8	c.T926A	p.L309Q	AATTTCTGATGTT	.	117.0	35.0	134.0	0.0	.	95	.	.	.	none	.	.	PASS	Atlas-SNP
MGA	23269	hgsc.bcm.edu	hg19	15	42005411	42005411	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	MGA	NM_001080541	exon9	c.T3147A	p.N1049K	CAACAATGACTTC	.	117.0	32.0	132.0	0.0	.	264	.	.	.	none	.	.	PASS	Atlas-SNP
VPS13C	54832	hgsc.bcm.edu	hg19	15	62167108	62167108	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	VPS13C	NM_020821	exon77	c.A10381T	p.I3461F	CTCCAATCACTAA	.	173.0	60.0	141.0	0.0	.	506	.	.	.	none	.	.	PASS	Atlas-SNP
TP53	7157	hgsc.bcm.edu	hg19	17	7578190	7578190	+	Missense_Mutation	SNP	T	T	G	rs121912666		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	TP53_ENST00000545858,NS,carcinoma,0,1	TP53	NM_000546	exon6	c.A659C	p.Y220S	GGCTCATAGGGCA	.	61.0	9.0	44.0	0.0	.	33396	.	.	.	weak	.	.	PASS	Atlas-SNP
CHAD	1101	hgsc.bcm.edu	hg19	17	48546019	48546019	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	CHAD	NM_001267	exon1	c.G156T	p.K52N	CTTGGTCTTCTCT	.	86.0	17.0	70.0	0.0	.	36	.	.	.	none	.	.	PASS	Atlas-SNP
RBPJL	11317	hgsc.bcm.edu	hg19	20	43940944	43940944	+	Silent	SNP	C	C	T	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	RBPJL,NS,chondrosarcoma,0,1	RBPJL	NM_014276	exon6	c.C528T	p.R176R	GCTGCGCGGGGGC	.	44.0	14.0	39.0	1.0	.	67	.	.	.	none	.	.	PASS	Atlas-SNP
TOP3B	8940	hgsc.bcm.edu	hg19	22	22327036	22327036	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	TOP3B	NM_003935	exon4	c.C257A	p.P86H	TCCGTGGGAGCTT	.	69.0	29.0	65.0	0.0	.	107	.	.	.	none	.	.	PASS	Atlas-SNP
CABIN1	23523	hgsc.bcm.edu	hg19	22	24483456	24483456	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	CABIN1	NM_001199281	exon23	c.C3315A	p.D1105E	TCAGGACAAGCTG	.	61.0	15.0	85.0	0.0	.	153	.	.	.	none	.	.	PASS	Atlas-SNP
DDX53	168400	hgsc.bcm.edu	hg19	X	23019108	23019108	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	DDX53	NM_182699	exon1	c.G934A	p.V312M	CTTCACGTGGAAG	.	64.0	36.0	68.0	0.0	.	76	.	.	.	none	.	.	PASS	Atlas-SNP
ZNF559	84527	hgsc.bcm.edu	hg19	19	9452840	9452840	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	ZNF559	NM_001202406	exon6	c.904delG	p.E302fs	.	.	110.0	38.0	106.0	0.0	.	77	.	0.345455	0	none	.	.	PASS	Atlas-INDEL
ABHD16A	7920	hgsc.bcm.edu	hg19	6	31655645	31655646	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-BQ-5881-01A-11D-1589-08	TCGA-BQ-5881-11A-01D-1589-08	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	759af132-b471-4ceb-b72a-3c665d2fd20c	6cd411c9-9521-4a49-9caf-2b2652a4c0e4	.	ABHD16A	NM_021160	exon17	c.1403_1404insC	p.R468fs	.	.	118.0	21.0	135.0	0.0	.	34	.	0.177966	0	none	.	.	PASS	Atlas-INDEL