Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
DCTN1	0	genome.wustl.edu	36	2	74458845	74458845	+	Silent	SNP	G	G	A			TCGA-AB-3007-03A-01D-0739-09	TCGA-AB-3007-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f6d05765-b161-480b-8613-b243e7a579a0	fff75bd4-e19f-4b6c-841d-12f05e25a817	2	74458845	74458845	G	A	SNP	DCTN1	NM_004082.1	human	genbank	54_36p	-1	reviewed	silent	c.69	p.S23	0.990	superfamily_Cap-Gly domain	HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1,superfamily_Spectrin repeat,superfamily_Cap-Gly domain	-	no_errors	949	1	0.11	646	362	35.84	14	10	41.67
TMEM169	0	genome.wustl.edu	36	2	216673162	216673162	+	Silent	SNP	C	C	T			TCGA-AB-3007-03A-01D-0739-09	TCGA-AB-3007-11A-01D-0739-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f6d05765-b161-480b-8613-b243e7a579a0	fff75bd4-e19f-4b6c-841d-12f05e25a817	2	216673162	216673162	C	T	SNP	TMEM169	NM_138390.1	human	genbank	54_36p	+1	validated	silent	c.546	p.Y182	0.998	NULL	NULL	-	no_errors	2880	4	0.14	1169	629	34.91	NA	NA	NA
LOC391769	0	genome.wustl.edu	36	5	17688319	17688319	+	Silent	SNP	G	G	A			TCGA-AB-3007-03A-01D-0739-09	TCGA-AB-3007-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f6d05765-b161-480b-8613-b243e7a579a0	fff75bd4-e19f-4b6c-841d-12f05e25a817	5	17688319	17688319	G	A	SNP	LOC391769	XM_373079.1	human	genbank	54_36p	-1	model	silent	c.78	p.A26	0.986	superfamily_Histone-fold	HMMSmart_SM00428,PatternScan_HISTONE_H3_2,HMMPfam_Histone,superfamily_Histone-fold	-	no_errors	197	0	0.00	221	161	41.82	NA	NA	NA
TTLL2	0	genome.wustl.edu	36	6	167674657	167674657	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-3007-03A-01D-0739-09	TCGA-AB-3007-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f6d05765-b161-480b-8613-b243e7a579a0	fff75bd4-e19f-4b6c-841d-12f05e25a817	6	167674657	167674657	G	A	SNP	TTLL2	NM_031949.4	human	genbank	54_36p	+1	validated	missense	c.1279	p.A427T	0.000	NULL	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like	-	no_errors	1012	2	0.20	331	188	36.08	2	0	0.00
STX3	0	genome.wustl.edu	36	11	59316265	59316265	+	Splice_Site	SNP	G	G	T			TCGA-AB-3007-03A-01D-0739-09	TCGA-AB-3007-11A-01D-0739-09	G	G	G	T	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f6d05765-b161-480b-8613-b243e7a579a0	fff75bd4-e19f-4b6c-841d-12f05e25a817	11	59316265	59316265	G	T	SNP	STX3	NM_004177.3	human	genbank	54_36p	+1	provisional	splice_site	c.466+1	e6+1	1.000	-	-	-	no_errors	1497	0	0.00	683	387	36.13	0	3	100.00
POU6F1	0	genome.wustl.edu	36	12	49876972	49876972	+	Missense_Mutation	SNP	A	A	C			TCGA-AB-3007-03A-01D-0739-09	TCGA-AB-3007-11A-01D-0739-09	A	A	A	C	A	A	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f6d05765-b161-480b-8613-b243e7a579a0	fff75bd4-e19f-4b6c-841d-12f05e25a817	12	49876972	49876972	A	C	SNP	POU6F1	ENST00000389243	human	ensembl	54_36p	-1	known	missense	c.759	p.S253R	1.000	NULL	HMMPfam_Pou,HMMSmart_SM00352,PatternScan_POU_1,PatternScan_POU_2,HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,superfamily_lambda repressor-like DNA-binding domains	-	no_errors	369	2	0.54	296	159	34.87	2	0	0.00
SLC12A1	0	genome.wustl.edu	36	15	46326467	46326467	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-3007-03A-01D-0739-09	TCGA-AB-3007-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f6d05765-b161-480b-8613-b243e7a579a0	fff75bd4-e19f-4b6c-841d-12f05e25a817	15	46326467	46326467	G	A	SNP	SLC12A1	NM_000338.2	human	genbank	54_36p	+1	validated	missense	c.1522	p.A508T	0.998	HMMPfam_AA_permease	HMMPfam_AA_permease,HMMPfam_AA_permease_N	-	no_errors	1545	3	0.19	1033	326	23.88	NA	NA	NA
G6PC	0	genome.wustl.edu	36	17	38316527	38316527	+	Missense_Mutation	SNP	T	T	G			TCGA-AB-3007-03A-01D-0739-09	TCGA-AB-3007-11A-01D-0739-09	T	T	T	G	T	T	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f6d05765-b161-480b-8613-b243e7a579a0	fff75bd4-e19f-4b6c-841d-12f05e25a817	17	38316527	38316527	T	G	SNP	G6PC	NM_000151.2	human	genbank	54_36p	+1	reviewed	missense	c.632	p.L211R	0.741	NULL	HMMPfam_PAP2,HMMSmart_acidPPc,superfamily_AcPase_VanPerase	-	no_errors	1467	0	0.00	1322	792	37.43	NA	NA	NA
CECR2	0	genome.wustl.edu	36	22	16402686	16402686	+	Missense_Mutation	SNP	G	G	A			TCGA-AB-3007-03A-01D-0739-09	TCGA-AB-3007-11A-01D-0739-09	G	G	G	A	G	G	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f6d05765-b161-480b-8613-b243e7a579a0	fff75bd4-e19f-4b6c-841d-12f05e25a817	22	16402686	16402686	G	A	SNP	CECR2	ENST00000400585	human	ensembl	54_36p	+1	known	missense	c.2788	p.D930N	0.021	NULL	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors	356	2	0.56	352	181	33.96	NA	NA	NA
FLT3	0	genome.wustl.edu	36	13	27506255	27506256	+	In_Frame_Ins	INS	-	-	ATCATATTCATATTCTCTGAA			TCGA-AB-3007-03A-01D-0739-09	TCGA-AB-3007-11A-01D-0739-09	-	-	-	ATCATATTCATATTCTCTGAA	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	f6d05765-b161-480b-8613-b243e7a579a0	fff75bd4-e19f-4b6c-841d-12f05e25a817	13	27506255	27506256	-	ATCATATTCATATTCTCTGAA	INS	FLT3	NM_004119.2	human	genbank	54_36p	-1	reviewed	in_frame_ins	c.1801_1800	p.600in_frame_insFREYEYD	1.000:0.998	superfamily_Kinase_like	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR,superfamily_Kinase_like,HMMPfam_ig,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF48726	-	no_errors	NA	NA	NA	NA	NA	NA	NA	NA	NA