Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	ref_context	gc_content	t_alt_count	t_ref_count
DDB2	1643	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	11	47256422	47256422	+	Missense_Mutation	SNP	C	C	T			TCGA-DB-A4XA-01A-11D-A26M-08	TCGA-DB-A4XA-10A-01D-A26K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fb5e54dc-5a3c-4a34-8f3c-969d03648335	232a02d7-127b-4021-8da7-27e6b63a1a7d	TTGGGACCTGCGCCAGGTTAG	0.537	11	26
GRIN2A	2903	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	16	9857512	9857512	+	Missense_Mutation	SNP	C	C	T			TCGA-DB-A4XA-01A-11D-A26M-08	TCGA-DB-A4XA-10A-01D-A26K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fb5e54dc-5a3c-4a34-8f3c-969d03648335	232a02d7-127b-4021-8da7-27e6b63a1a7d	CTAGGTTTGTCGACAATGTTA	0.507	9	62
EFCAB3	146779	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	60484520	60484520	+	Missense_Mutation	SNP	C	C	T	rs115042128	byFrequency	TCGA-DB-A4XA-01A-11D-A26M-08	TCGA-DB-A4XA-10A-01D-A26K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fb5e54dc-5a3c-4a34-8f3c-969d03648335	232a02d7-127b-4021-8da7-27e6b63a1a7d	AATAAAGGAGCCTTTGCATTT	0.348	9	41
AATK	9625	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	17	79094025	79094025	+	Silent	SNP	G	G	A			TCGA-DB-A4XA-01A-11D-A26M-08	TCGA-DB-A4XA-10A-01D-A26K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fb5e54dc-5a3c-4a34-8f3c-969d03648335	232a02d7-127b-4021-8da7-27e6b63a1a7d	AGACGGTGACGTCGTCGAAGA	0.697	21	39
ARID1A	8289	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	1	27057668	27057668	+	Missense_Mutation	SNP	C	C	T			TCGA-DB-A4XA-01A-11D-A26M-08	TCGA-DB-A4XA-10A-01D-A26K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fb5e54dc-5a3c-4a34-8f3c-969d03648335	232a02d7-127b-4021-8da7-27e6b63a1a7d	CAACAAGGCCCCAGCGGGTAT	0.502	59	54
IDH1	3417	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	2	209113112	209113112	+	Missense_Mutation	SNP	C	C	T	rs121913500		TCGA-DB-A4XA-01A-11D-A26M-08	TCGA-DB-A4XA-10A-01D-A26K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fb5e54dc-5a3c-4a34-8f3c-969d03648335	232a02d7-127b-4021-8da7-27e6b63a1a7d	ATAAGCATGACGACCTATGAT	0.393	12	37
SYNJ2	8871	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	6	158507947	158507947	+	Missense_Mutation	SNP	G	G	A	rs141300011		TCGA-DB-A4XA-01A-11D-A26M-08	TCGA-DB-A4XA-10A-01D-A26K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fb5e54dc-5a3c-4a34-8f3c-969d03648335	232a02d7-127b-4021-8da7-27e6b63a1a7d	TTCCGCCACCGTTCTCCGAGC	0.642	10	37
MUC16	94025	broad.mit.edu;ucsc.edu	37	19	9082732	9082732	+	Missense_Mutation	SNP	C	C	A	rs139519759	by1000genomes	TCGA-DB-A4XA-01A-11D-A26M-08	TCGA-DB-A4XA-10A-01D-A26K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fb5e54dc-5a3c-4a34-8f3c-969d03648335	232a02d7-127b-4021-8da7-27e6b63a1a7d	GGGAGAGGAACTAGAACCAGA	0.488	22	30
CIC	23152	broad.mit.edu;hgsc.bcm.edu	37	19	42791822	42791824	+	In_Frame_Del	DEL	GTG	GTG	-			TCGA-DB-A4XA-01A-11D-A26M-08	TCGA-DB-A4XA-10A-01D-A26K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fb5e54dc-5a3c-4a34-8f3c-969d03648335	232a02d7-127b-4021-8da7-27e6b63a1a7d	TCCTGGGCGAGTGGTGGTATGCC	0.611	12	47