Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ref_context gc_content t_alt_count t_ref_count ITGA8 8516 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 10 15559198 15559198 + Missense_Mutation SNP C C T TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 TGTTCCCTGTCGGTCATGTCC 0.443 21 36 GALNT18 374378 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 11642953 11642953 + Missense_Mutation SNP A A G TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 CAGCCGCTCAATAATCTTCAG 0.622 62 141 GIF 2694 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 59611461 59611461 + Silent SNP T T C TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 GGTAGGCTGATGAAGTCACCG 0.522 15 64 BTG4 54766 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 111365994 111365994 + Missense_Mutation SNP G G A rs140812937 TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 TTCTTTTTGCGGGGGATTTGT 0.448 32 68 CNTN1 1272 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 12 41333261 41333261 + Silent SNP G G A TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 GGAGTAAAGGGACAGAGTGGC 0.373 11 39 MPHOSPH8 54737 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 13 20221185 20221185 + Silent SNP C C T TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 AGGAGGATACCGATGTCAGAG 0.498 13 48 LATS2 26524 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 13 21562426 21562426 + Missense_Mutation SNP C C A TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 CGGGAAGGCGCCTGCGCCGCC 0.766 8 9 CCDC113 29070 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 16 58287907 58287907 + Silent SNP A A G TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 TGCAGTTTCGAGGCAGGCGTA 0.498 50 99 TP53 7157 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 17 7577094 7577094 + Missense_Mutation SNP G G A rs28934574 TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 TCTGTGCGCCGGTCTCTCCCA 0.557 22 46 GFAP 2670 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 17 42991175 42991175 + Missense_Mutation SNP G G T TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 ACGGGCCAGGGTGGCTTCATC 0.622 76 118 ELANE 1991 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 852925 852925 + Silent SNP C C T TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 CGCGGCCCCACGCGTGGCCCT 0.721 6 29 LRP3 4037 hgsc.bcm.edu;broad.mit.edu 37 19 33696671 33696671 + Missense_Mutation SNP G G A TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 AGCAACCACCGGCCCGTGAGC 0.706 9 1 LILRA1 11024 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 19 55105741 55105741 + Missense_Mutation SNP T T A TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 CTGATCTGTCTCAGTGAGATT 0.587 65 77 DNAJC28 54943 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 21 34860571 34860571 + Missense_Mutation SNP A A T TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 CCACAGATTCATCCAGTTTAA 0.299 8 26 HDAC10 83933 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 22 50689416 50689416 + Missense_Mutation SNP G G T TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 TCCCAGAGCAGCCGGGTGGCC 0.667 31 57 OTOF 9381 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 26686908 26686908 + Missense_Mutation SNP C C T rs143889717 TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 GCAGCCTGCGCGGGGGATGTC 0.667 76 172 TMEM131 23505 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 98504555 98504555 + Missense_Mutation SNP G G A TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 AATCGTATGGGCCTGCAATTC 0.338 10 30 RIF1 55183 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 152319418 152319418 + Silent SNP C C T TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 TGGACAGTGACATTGTCATTC 0.393 21 42 GALNT13 114805 hgsc.bcm.edu;ucsc.edu 37 2 155306962 155306962 + Missense_Mutation SNP G G C TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 CCAATGTCTCGATGAACCTTC 0.438 38 76 SCN2A 6326 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 166170182 166170182 + Missense_Mutation SNP G G A TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 CCCCAACTATGGCTACACGAG 0.433 35 77 IDH1 3417 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 209113112 209113112 + Missense_Mutation SNP C C T rs121913500 TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 ATAAGCATGACGACCTATGAT 0.393 22 83 ANKRD17 26057 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 4 74012998 74012998 + Silent SNP T T C TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 AATGACCCTCTTGAGCAGCTT 0.398 58 96 KIF25 3834 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 168440828 168440828 + Missense_Mutation SNP C C T TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 CTGGTGCACGCGGATTCCTCC 0.572 16 51 KIAA1549 57670 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 138603027 138603027 + Missense_Mutation SNP C C T TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 CACAGAGTCTCGGCACCATCC 0.517 13 115 PKHD1L1 93035 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 8 110487479 110487479 + Missense_Mutation SNP C C T TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 TCATATACATCGACATTCTAT 0.338 8 14 CDC14B 8555 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 9 99296274 99296274 + Missense_Mutation SNP G G A TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 TTTGACAATGGCATCAGTAGG 0.423 11 8 ARSF 416 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 3021883 3021883 + Missense_Mutation SNP C C T rs141853880 byFrequency TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 ACCAGCTGGACGGTTGATTAA 0.478 41 87 ZNF630 57232 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 47918328 47918328 + Silent SNP A A C TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 GTATGATAAGAGGTGATTTCT 0.413 33 49 TFE3 7030 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 48887870 48887870 + Missense_Mutation SNP G G T TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 GGTCCCCCAGGTGGTCGCTGG 0.672 22 166 IRS4 8471 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 107978402 107978402 + Silent SNP G G A TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 AAAGCATCTCGTCTTCCCCGT 0.652 50 104 HS6ST2 90161 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 X 132091353 132091353 + Splice_Site SNP C C T TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 ATGTTCCCGACGCTGGGGGAA 0.627 11 57 ADH1C 126 broad.mit.edu;ucsc.edu 37 4 100263953 100263953 + RNA SNP A A G rs78836241 TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 GGATCATACCATGGTGTCAAG 0.413 89 199 GPR50 9248 broad.mit.edu;ucsc.edu 37 X 150349612 150349612 + Missense_Mutation SNP C C A TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 CCACTGCTGACTATCCCAAGC 0.617 80 196 AKR1CL1 340811 broad.mit.edu;ucsc.edu 37 10 5203897 5203897 + Silent SNP C C T TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 TTTCTAGGGCCGGGTGAACCA 0.388 13 23 MIR520H 574493 broad.mit.edu;ucsc.edu 37 19 54245794 54245794 + RNA SNP A A G TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 TAGAGGAAGCACTTTCTGTTT 0.388 21 40 TBCK 93627 broad.mit.edu;ucsc.edu 37 4 107229997 107229997 + Missense_Mutation SNP G G A TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 ATTTGAAAGCGCCCTAAAATT 0.413 25 72 RPS6KA3 6197 broad.mit.edu;ucsc.edu 37 X 20205954 20205954 + Missense_Mutation SNP C C A TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 ACCATTAACACACCAAAAGAC 0.388 77 218 PKD1L1 168507 broad.mit.edu;ucsc.edu 37 7 47840379 47840379 + Silent SNP G G A rs138774842 TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 ACAGCAGCCCGGGGAAGGCGT 0.567 46 125 RLF 6018 broad.mit.edu;hgsc.bcm.edu 37 1 40701977 40701978 + Frame_Shift_Del DEL AA AA - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 GCATAAGGAGAAAAGAGACAAA 0.356 29 31 ALMS1 7840 broad.mit.edu;hgsc.bcm.edu 37 2 73746974 73746976 + In_Frame_Del DEL AAC AAC - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 TCACTCAGATAACAACAGAAAGT 0.384 12 41 EPC2 26122 broad.mit.edu;hgsc.bcm.edu 37 2 149539217 149539218 + Frame_Shift_Del DEL AG AG - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 TACCAGTAACAGGGGGTATCAC 0.376 16 32 SKIV2L2 23517 broad.mit.edu;hgsc.bcm.edu 37 5 54706365 54706367 + In_Frame_Del DEL CTT CTT - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 TGATGAGCTCCTTCTAACTGAGA 0.35 31 103 IPO11 51194 broad.mit.edu;hgsc.bcm.edu 37 5 61779947 61779949 + In_Frame_Del DEL GAA GAA - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 CCTATTAACTGAAGAAGAACTGA 0.33 18 42 PIK3R1 5295 broad.mit.edu;hgsc.bcm.edu 37 5 67589550 67589552 + In_Frame_Del DEL AAG AAG - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 CAAGTTGTCAAAGAAGATAATAT 0.266 10 26 PIK3R1 5295 broad.mit.edu;hgsc.bcm.edu 37 5 67589623 67589624 + Frame_Shift_Del DEL AT AT - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 AAAGTCGAGAATATGATAGATT 0.287 17 36 NOTCH1 4851 broad.mit.edu;hgsc.bcm.edu 37 9 139413070 139413072 + In_Frame_Del DEL AGA AGA - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 CACTCGCAGTAGAAGGAGGCCAC 0.655 12 43 TTBK2 146057 broad.mit.edu;hgsc.bcm.edu 37 15 43045062 43045066 + Frame_Shift_Del DEL ACTTA ACTTA - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 GCTGCCCTCTACTTAACTTCTCATC 0.4 27 85 IREB2 3658 broad.mit.edu;hgsc.bcm.edu 37 15 78764190 78764192 + In_Frame_Del DEL CCT CCT - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 AAGAAAAAGACCTCCTCTTCCCA 0.399 20 54 ACADVL 37 broad.mit.edu;hgsc.bcm.edu 37 17 7125570 7125572 + In_Frame_Del DEL AGG AGG - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 GGAGCCGTGAAGGAGAAGATCAC 0.552 25 74 TSHZ1 10194 broad.mit.edu;hgsc.bcm.edu 37 18 72997649 72997651 + In_Frame_Del DEL AGA AGA - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 TCTCGAGAAGAGAAGGAGGATCC 0.586 14 31 EID2B 126272 broad.mit.edu;hgsc.bcm.edu 37 19 40023078 40023081 + Frame_Shift_Del DEL ACAA ACAA - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 GCAGCCTTCCACAAACAGCCTGCG 0.574 18 44 TRIM28 10155 broad.mit.edu;hgsc.bcm.edu 37 19 59061018 59061021 + Splice_Site DEL GTGA GTGA - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 ATGTACCAGGGTGAGTGTGAGGCT 0.574 87 140 FUBP1 8880 broad.mit.edu 37 1 78433848 78433851 + Splice_Site DEL CAGT CAGT - TCGA-DU-7300-01A-21D-2086-08 TCGA-DU-7300-10A-01D-2086-08 Untested Somatic Phase_I WXS none Illumina GAIIx 41bb7bd2-c24e-41ae-881d-25b44ae287ad 2de73131-9a0c-46fc-aa61-6d35f76f75d2 GGAATACTTACAGTCATTTTGAGG 0.319 8 14