Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_file Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID ref_context gc_content t_alt_count t_ref_count DMBT1 1755 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 10 124390734 124390734 + Missense_Mutation SNP C C T TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 CTGGCAGTGCCGGAACCGAGG 0.542 32 38 NLRP6 171389 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 281637 281637 + Missense_Mutation SNP C C T TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 CGCGTTTGTGCGCCAAGCCCT 0.647 33 90 EXPH5 23086 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 11 108381471 108381471 + Missense_Mutation SNP C C A TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 AACTGAAGATCTATTTTCCCC 0.423 44 103 LRRC43 254050 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 12 122685392 122685392 + Missense_Mutation SNP C C A TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 GATCCTGGAGCCCCTGCTCGC 0.667 26 37 TP53 7157 hgsc.bcm.edu;broad.mit.edu 37 17 7577121 7577121 + Missense_Mutation SNP G G A rs121913343 TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 GCACAAACACGCACCTCAAAG 0.542 17 6 KLHL14 57565 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 18 30349853 30349853 + Silent SNP C C T TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 GCGCCAGCTCCGACTCCACGG 0.652 15 24 RYR2 6262 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 1 237753198 237753198 + Missense_Mutation SNP G G T TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 TTACAAGAGGGCTATGAACCA 0.433 4 33 SSB 6741 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 170665016 170665016 + Missense_Mutation SNP T T A TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 CCAAAAAAAATGAAGAAAGAA 0.318 9 44 INO80D 54891 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 206921218 206921218 + Missense_Mutation SNP G G A TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 CTGCGGTGGCGCTGGAGGTTT 0.562 7 18 IDH1 3417 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 209113112 209113112 + Missense_Mutation SNP C C T rs121913500 TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 ATAAGCATGACGACCTATGAT 0.393 28 43 TBX18 9096 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 85448225 85448225 + Silent SNP A A T TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 CTTGCTTGGGAATTCCAGGGA 0.438 75 143 TTYH3 80727 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 2696109 2696109 + Silent SNP C C G TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 TCTCCTTCGTCACAGCCCTCA 0.642 11 101 CALCR 799 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 7 93072938 93072938 + Silent SNP C C G rs149950588 TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 GATAATACCACCGCAAGCGTT 0.443 24 59 SPATA31D1 389763 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 9 84608693 84608693 + Missense_Mutation SNP A A G TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 GTCAGTCAGAAACAGACTGTA 0.493 15 41 CYP4F3 4051 broad.mit.edu;ucsc.edu 37 19 15752394 15752394 + Missense_Mutation SNP C C T rs138587161 TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 ACCCCCGAAACGGAATTGGTT 0.622 6 62 CRADD 8738 broad.mit.edu;ucsc.edu 37 12 94243956 94243956 + Missense_Mutation SNP G G A rs141179774 byFrequency TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 TGGCGGCAGCGCTTCGGGAAG 0.637 22 28 ATRX 546 broad.mit.edu;hgsc.bcm.edu 37 X 76938452 76938453 + Frame_Shift_Ins INS - - T TCGA-HT-7473-01A-11D-2024-08 TCGA-HT-7473-10A-01D-2024-08 Untested Somatic Phase_I WXS none Illumina GAIIx 1b6fde57-4d81-469c-a142-234ce43eee12 bdddf6da-3421-4597-9dec-c5e1ec3994e8 GTCTTTAAATCATACAAAGTCT 0.356 83 39