Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene TranscriptID Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq AKAP11 11215 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 13 42877120 42877120 + Nonsense_Mutation SNP C C A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . AKAP11 NM_016248 exon8 c.C4238A p.S1413X TGTTTTCAAACAA . 56.0 17.0 54.0 0.0 . 227 AMY2A 279 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 104160673 104160673 + Missense_Mutation SNP G G C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . AMY2A NM_000699 exon2 c.G266C p.G89A GATCTGGAAATGA . 1040.0 372.0 189.0 0.0 . 92 ANKRD11 29123 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 89349770 89349770 + Silent SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . ANKRD11 NM_001256183 exon9 c.A3180G p.K1060K GGTATCTTTTTTC . 277.0 115.0 124.0 0.0 . 139 APOB 338 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 2 21245890 21245891 + Frame_Shift_Ins INS - - T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . APOB NM_000384 exon18 c.2629_2630insA p.P877fs CGGAGGGTTTTGC . 137.0 48.0 79.0 0.0 . 175 APOB 338 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 21231053 21231053 + Missense_Mutation SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . APOB NM_000384 exon26 c.C8687T p.P2896L AGTTTGGGGATGT . 232.0 100.0 110.0 0.0 . 175 AQR 9716 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 35198872 35198872 + Missense_Mutation SNP G G T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . AQR NM_014691 exon18 c.C1705A p.P569T TTGTGGGACGTAC . 100.0 39.0 58.0 0.0 . 135 ARMC10 83787 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 102738867 102738867 + Missense_Mutation SNP A A G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . ARMC10 NM_031905 exon7 c.A899G p.Q300R CTGTGCAGCCTAC . 614.0 165.0 175.0 0.0 . 91 ATCAY 85300 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 3910853 3910853 + Missense_Mutation SNP C C T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . ATCAY NM_033064 exon8 c.C832T p.R278W TTCATTCGGACTG . 137.0 63.0 64.0 0.0 . 67 ATP13A3 79572 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 194126804 194126804 + Silent SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . ATP13A3 NM_024524 exon32 c.C3525T p.A1175A GCCCAGGGCCCAG . 198.0 79.0 96.0 0.0 . 69 ATP1A1 476 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 116933025 116933025 + Missense_Mutation SNP A A C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . ATP1A1 NM_001160233 exon9 c.A1214C p.N405T CAGAGAATCAGAG . 191.0 66.0 88.0 0.0 . 91 ATP2B2 491 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 10443888 10443888 + Missense_Mutation SNP C C A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . ATP2B2 NM_001683 exon4 c.G542T p.G181V TGCAGGCCCCGGA . 95.0 40.0 45.0 0.0 . 95 ATP5G3 518 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 176044872 176044872 + Missense_Mutation SNP A A T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . ATP5G3 NM_001190329 exon3 c.T74A p.I25N GCAGAAATTGGTC . 92.0 35.0 62.0 1.0 . 91 BCDIN3D 144233 ucsc.edu;bcgsc.ca 37 12 50232284 50232284 + Missense_Mutation SNP A A G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . BCDIN3D NM_181708 exon2 c.T749C p.F250S TTGCCAAAGCAAC . 48.0 4.0 36.0 0.0 . 69 C4orf40 401137 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 4 71024317 71024318 + Frame_Shift_Ins INS - - T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . C4orf40 NM_214711 exon3 c.348_349insT p.R116fs TTCAAGGTTTTTT . 108.0 28.0 46.0 0.0 . 68 CAB39 51719 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 231624746 231624746 + Silent SNP A A G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . CAB39 NM_001130849 exon2 c.A30G p.K10K TCACAAATCTCCA . 267.0 114.0 100.0 0.0 . 226 CACNA1B 774 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 140880982 140880982 + Missense_Mutation SNP G G T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . CACNA1B NM_001243812 exon14 c.G1887T p.Q629H GATGCAGCTGTTT . 298.0 110.0 109.0 0.0 . 138 CCDC146 57639 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 76909777 76909777 + Missense_Mutation SNP A A G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . CCDC146 NM_020879 exon14 c.A1726G p.N576D CACGCCAACAATG . 126.0 50.0 92.0 0.0 . 70 CES4A 283848 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 67038121 67038121 + Missense_Mutation SNP G G T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . CES4A NM_173815 exon9 c.G1074T p.L358F GCTCTTGCCTTAT . 210.0 76.0 79.0 0.0 . 91 CHRM3 1131 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 240071370 240071370 + Missense_Mutation SNP T T A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . CHRM3 NM_000740 exon5 c.T619A p.W207R TTGTTCTGGCAAT . 571.0 353.0 124.0 0.0 . 95 CLSTN1 22883 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 9795606 9795606 + Missense_Mutation SNP G G T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . CLSTN1 NM_001009566 exon13 c.C1802A p.A601D TGCATGGCCTTAT . 215.0 92.0 98.0 0.0 . 523 CNKSR2 22866 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 21545015 21545015 + Missense_Mutation SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . CNKSR2 NM_001168647 exon10 c.G988A p.V330I AGCAGCGTTGCCA . 177.0 163.0 60.0 0.0 . 625 CNOT11 55571 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 101885756 101885756 + Missense_Mutation SNP A A T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . . NM_017546 exon7 c.A1414T p.I472L TTGTTTATAGAAG . 188.0 74.0 94.0 0.0 . . COG3 83548 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 13 46077408 46077408 + Frame_Shift_Del DEL G G - novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . COG3 NM_031431 exon14 c.1518delG p.Q506fs TGAACAGAAGAAG . 118.0 16.0 80.0 0.0 . 154 COL12A1 1303 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 75884785 75884785 + Missense_Mutation SNP G G T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . COL12A1 NM_004370 exon13 c.C2679A p.D893E GAGGGCGTCTCCA . 170.0 68.0 75.0 0.0 . 142 COL15A1 1306 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 9 101749575 101749575 + Splice_Site SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . COL15A1 NM_001855 exon4 c.649-1G>A . TCCCCAGGGCTCC . 65.0 27.0 25.0 0.0 . 96 COL6A5 256076 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 130113755 130113755 + Silent SNP C C T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . . NM_153264 exon8 c.C3015T p.D1005D AGCTGACGTGATT . 124.0 47.0 73.0 0.0 . . CPA6 57094 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 68419048 68419048 + Missense_Mutation SNP C C T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . CPA6 NM_020361 exon6 c.G610A p.A204T AAAAGGCAGGACC . 158.0 60.0 80.0 1.0 . 92 CREBBP 1387 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 3778620 3778620 + Missense_Mutation SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . CREBBP NM_004380 exon31 c.A6428G p.N2143S ATGGCATTCAGGT . 63.0 18.0 23.0 0.0 . 1807 CTNNB1 1499 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 3 41266093 41266107 + In_Frame_Del DEL CCTGGACTCTGGAAT CCTGGACTCTGGAAT - novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 CCTGGACTCTGGAAT CCTGGACTCTGGAAT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 CTNNB1,NS,carcinoma,+1 CTNNB1 NM_001098209 exon3 c.90_104del p.30_35del GTCTTACCTGGAC . 191.0 23.0 107.0 0.0 . 24361 DAAM1 23002 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 59820665 59820665 + Missense_Mutation SNP T T A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . DAAM1 NM_014992 exon19 c.T2369A p.V790E CAGAAGTGAAACC . 112.0 46.0 69.0 0.0 . 227 DAZL 1618 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 16639045 16639045 + Silent SNP A A G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . DAZL NM_001190811 exon4 c.T306C p.Y102Y AAATCCATAGCTA . 198.0 68.0 112.0 0.0 . 90 DDX59 83479 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 200635118 200635118 + Missense_Mutation SNP A A T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . DDX59 NM_001031725 exon2 c.T751A p.S251T TTCCTGAGCCAGT . 442.0 102.0 114.0 0.0 . 155 DGAT2 84649 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 75508294 75508294 + Silent SNP T T G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . DGAT2 NM_032564 exon6 c.T726G p.A242A TGCGGCTGAGTCT . 101.0 36.0 40.0 0.0 . 226 DGKZ 8525 ucsc.edu;bcgsc.ca 37 11 46397126 46397126 + Missense_Mutation SNP C C A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . DGKZ NM_001105540 exon21 c.C2419A p.Q807K CGCAACCAGGCCA . 44.0 4.0 28.0 0.0 . 676 DHRS4 10901 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 14 24435604 24435604 + Missense_Mutation SNP T T G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . DHRS4 NM_021004 exon6 c.T644G p.I215S GACTTATCAAGAC . 1264.0 258.0 182.0 0.0 . 91 DIP2C 22982 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 10 390969 390969 + Missense_Mutation SNP C C A rs200340134 alternate_allele TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . DIP2C NM_014974 exon27 c.G3313T p.V1105F TCCTGACGTCCAC . 54.0 23.0 29.0 0.0 C|0.999;T|0.000 156 DKK2 27123 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 107845310 107845310 + Missense_Mutation SNP C C T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . DKK2 NM_014421 exon4 c.G581A p.C194Y GCACAGCAAAACC . 179.0 79.0 84.0 0.0 . 661 DPF3 8110 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 73159816 73159816 + Missense_Mutation SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . DPF3 NM_012074 exon7 c.C710T p.S237F GGTGGGGACCGAG . 462.0 175.0 159.0 0.0 . 1 DYRK3 8444 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 206820946 206820946 + Missense_Mutation SNP G G T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . DYRK3 NM_003582 exon3 c.G403T p.A135S TCCAAGGCACCCA . 287.0 177.0 79.0 0.0 . 333 EIF4A2 1974 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 186504304 186504304 + Missense_Mutation SNP C C T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . EIF4A2 NM_001967 exon7 c.C641T p.S214F TGCTTTCTGCCAC . 405.0 154.0 138.0 0.0 . 291 ESPNL 339768 broad.mit.edu;mdanderson.org 37 2 239009145 239009145 + Missense_Mutation SNP C C T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . ESPNL NM_194312 exon1 c.C85T p.P29S CTGGGCCCGGGCA . 24.0 11.0 9.0 0.0 . 69 FEM1C 56929 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 114861063 114861063 + Missense_Mutation SNP A A C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . FEM1C NM_020177 exon3 c.T796G p.L266V ATTTCAAAGCCCC . 223.0 64.0 95.0 0.0 . 155 FLNB 2317 broad.mit.edu;bcgsc.ca 37 3 58097919 58097919 + Missense_Mutation SNP G G T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . FLNB NM_001457 exon18 c.G2619T p.K873N CACCAAGGGGGCT . 118.0 6.0 66.0 0.0 . 593 FLT4 2324 broad.mit.edu;mdanderson.org 37 5 180045886 180045886 + Missense_Mutation SNP G G T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . FLT4 NM_182925 exon21 c.C2885A p.A962D ACCATGGCGCGGA . 33.0 7.0 11.0 0.0 . 1490 FNDC7 163479 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 109270564 109270564 + Missense_Mutation SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . FNDC7 NM_001144937 exon7 c.G1246A p.D416N TGCAATGACACTA . 200.0 91.0 96.0 0.0 . 92 FOXG1 2290 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 14 29237348 29237348 + Missense_Mutation SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . FOXG1 NM_005249 exon1 c.G863A p.R288H TCAAGCGCGGTGC . 37.0 16.0 9.0 0.0 . 660 FUZ 80199 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 50314913 50314913 + Missense_Mutation SNP A A G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . FUZ NM_025129 exon4 c.T362C p.V121A CTCTCCACGTTGC . 195.0 73.0 102.0 0.0 . 90 GGA2 23062 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 23489767 23489767 + Missense_Mutation SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . GGA2 NM_015044 exon13 c.C1214T p.P405L CCGCCTGGCAGCG . 101.0 44.0 58.0 0.0 . 91 GPRIN3 285513 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 90170546 90170546 + Missense_Mutation SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . GPRIN3 NM_198281 exon2 c.C716T p.T239I TCTCTAGTTAGAG . 101.0 39.0 59.0 0.0 . 71 GYPE 2996 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 144801632 144801632 + Missense_Mutation SNP G G T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . . NM_198682 exon2 c.C68A p.T23N ACACCAGTGGTAC . 1142.0 206.0 188.0 0.0 . . H6PD 9563 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 1 9305494 9305494 + Nonsense_Mutation SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . H6PD NM_004285 exon2 c.G501A p.W167X CGCCTGGCTGCGG . 42.0 20.0 30.0 0.0 . 90 HERC2 8924 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 28446674 28446674 + Missense_Mutation SNP G G C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . HERC2 NM_004667 exon48 c.C7644G p.S2548R CGTCTGGCTCTCC . 378.0 146.0 135.0 0.0 . 234 ICAM5 7087 broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 10404754 10404754 + Missense_Mutation SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . ICAM5 NM_003259 exon8 c.T1750C p.W584R AGCAATTGGACAT . 83.0 23.0 42.0 1.0 . 153 IFNA8 3445 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 21409564 21409564 + Missense_Mutation SNP T T C rs28383787 alternate_allele TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . IFNA8 NM_002170 exon1 c.T389C p.I130T GGGTGATAGAGTC . 258.0 110.0 102.0 0.0 . 90 IL12RB2 3595 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 67861669 67861669 + Missense_Mutation SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . IL12RB2 NM_001559 exon16 c.T2486C p.L829P TCTCCCTTTCTGT . 335.0 124.0 130.0 0.0 . 92 IL21R 50615 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 27460101 27460101 + Missense_Mutation SNP G G T rs36031126 alternate_allele TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . IL21R NM_181079 exon10 c.G1180T p.G394C CCATACGGCCTGG . 56.0 19.0 19.0 0.0 G|0.986;A|0.014 660 IMPA1 3612 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 82591405 82591405 + Silent SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . IMPA1 NM_001144878 exon5 c.A435G p.T145T GATCCATGTGGGG . 169.0 66.0 106.0 1.0 . 226 IRS4 8471 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 X 107976586 107976586 + Missense_Mutation SNP G G A rs189095515 TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . IRS4 NM_003604 exon1 c.C2989T p.L997F GAGGAAGTGGCCA . 112.0 103.0 35.0 0.0 G|0.999;A|0.001 623 KCNB2 9312 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 73848335 73848335 + Missense_Mutation SNP C C G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . KCNB2 NM_004770 exon3 c.C745G p.L249V GAGTACCTTTTGC . 294.0 111.0 124.0 0.0 . 158 KCNJ11 3767 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 17409285 17409285 + Silent SNP C C T rs140636367 byfrequency TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . KCNJ11 NM_000525 exon1 c.G354A p.S118S GGCAGACGAGAAG . 71.0 13.0 42.0 0.0 C|0.999;T|0.001 91 KCNT2 343450 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 196309631 196309631 + Silent SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . KCNT2 NM_198503 exon16 c.A1623G p.R541R AATGTATCGAGGA . 199.0 42.0 70.0 0.0 . 159 LRP12 29967 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 105510097 105510097 + Missense_Mutation SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . LRP12 NM_013437 exon5 c.A683G p.K228R TAAACTTTGGTAA . 221.0 105.0 110.0 0.0 . 90 LUZP6 767558 ucsc.edu;bcgsc.ca 37 7 135612338 135612338 + Missense_Mutation SNP A A G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . . . . . . AATATGAACATTA . 46.0 4.0 42.0 0.0 . . MAPK8IP3 23162 ucsc.edu;bcgsc.ca 37 16 1816752 1816752 + Missense_Mutation SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . MAPK8IP3 NM_015133 exon24 c.T2965C p.W989R GCCAACTGGAAGA . 48.0 6.0 27.0 0.0 . 1109 MARK2 2011 broad.mit.edu;bcgsc.ca 37 11 63665732 63665732 + Missense_Mutation SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . MARK2 NM_001163296 exon4 c.T317C p.V106A TGAAGGTTTTGAA . 197.0 8.0 109.0 1.0 . 766 MAST2 23139 broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 46488584 46488584 + Missense_Mutation SNP A A G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . MAST2 NM_015112 exon13 c.A1426G p.M476V CCAGAAATGGCCC . 337.0 143.0 121.0 1.0 . 581 MCM2 4171 ucsc.edu;bcgsc.ca 37 3 127323790 127323790 + Missense_Mutation SNP A A G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . MCM2 NM_004526 exon4 c.A464G p.E155G AGGTGGAGCGGGC . 44.0 4.0 33.0 0.0 . 230 MED13 9969 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 60088347 60088347 + Missense_Mutation SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . MED13 NM_005121 exon9 c.A1531G p.I511V TTCGGATATTTGA . 539.0 148.0 155.0 0.0 . 136 MED13L 23389 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 116429410 116429410 + Missense_Mutation SNP C C T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . MED13L NM_015335 exon17 c.G3349A p.D1117N CGGAATCGGAGAG . 128.0 48.0 57.0 0.0 . 232 MEIS1 4211 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 66667100 66667100 + Missense_Mutation SNP C C A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . MEIS1 NM_002398 exon3 c.C365A p.A122D ATATAGCCGTGTT . 87.0 26.0 45.0 0.0 . 226 MLH1 4292 broad.mit.edu;bcgsc.ca 37 3 37048518 37048518 + Silent SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . MLH1 NM_000249 exon5 c.T417C p.P139P CCCTCCTAAACCA . 92.0 5.0 58.0 0.0 . 2559 MLL3 58508 ucsc.edu;bcgsc.ca 37 7 151935910 151935910 + Missense_Mutation SNP C C T rs4024419 byfrequency TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . MLL3 NM_170606 exon15 c.G2534A p.G845E CAAGCCCCCTAGG . 178.0 36.0 82.0 0.0 C|0.967;T|0.033 1398 MMP19 4327 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 12 56231749 56231750 + Frame_Shift_Del DEL CA CA - novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 CA CA . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . MMP19 NM_002429 exon7 c.937_938del p.313_313del ACAGTCCACACAT . 84.0 33.0 53.0 0.0 . 227 MRPL49 740 broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 64889822 64889822 + Missense_Mutation SNP G G C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . MRPL49 NM_004927 exon1 c.G4C p.A2P AAGATGGCAGCTA . 58.0 18.0 30.0 1.0 . 90 MRPS22 56945 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 139062911 139062911 + Missense_Mutation SNP A A T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . MRPS22 NM_020191 exon1 c.A43T p.R15W CTCTTGAGGAGTT . 64.0 18.0 26.0 0.0 . 93 MTMR14 64419 ucsc.edu;bcgsc.ca 37 3 9731800 9731800 + Missense_Mutation SNP G G C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . MTMR14 NM_001077526 exon17 c.G1586C p.S529T TGGGTAGCAGTCC . 46.0 4.0 27.0 0.0 . 91 MYNN 55892 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 169504351 169504351 + Missense_Mutation SNP A A G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . MYNN NM_001185118 exon9 c.A1718G p.H573R AGGACCATCACAT . 297.0 92.0 125.0 1.0 . 91 NPY2R 4887 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 4 156135578 156135578 + Missense_Mutation SNP C C G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . NPY2R NM_000910 exon2 c.C487G p.R163G TCCAAGCGAATCA . 48.0 19.0 14.0 0.0 . 523 NUP88 4927 ucsc.edu;bcgsc.ca 37 17 5319994 5319994 + Silent SNP A A G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . NUP88 NM_002532 exon2 c.T306C p.L102L TATGCAAAGCAAT . 43.0 4.0 59.0 0.0 . 204 OGDHL 55753 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 50947868 50947868 + Missense_Mutation SNP C C A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . OGDHL NM_018245 exon17 c.G2158T p.A720S CCATGGCATAGCC . 67.0 29.0 33.0 0.0 . 69 PAM 5066 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 102203011 102203011 + Missense_Mutation SNP T T A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . PAM NM_138822 exon2 c.T124A p.C42S AATGAATGTCTTG . 237.0 66.0 78.0 0.0 . 68 PBRM1 55193 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 3 52662939 52662939 + Nonsense_Mutation SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . PBRM1 NM_018313 exon13 c.C1414T p.R472X GAACTCGCTTGTA . 104.0 60.0 79.0 0.0 . 575 PCDHGC5 56097 hgsc.bcm.edu;mdanderson.org 37 5 140871440 140871440 + Missense_Mutation SNP A A T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . PCDHGC5 NM_032407 exon1 c.A2633T p.D878V TGGCCGATTAAGG . 141.0 28.0 40.0 0.0 . 25 PDE4DIP 9659 broad.mit.edu;bcgsc.ca 37 1 144915562 144915562 + Silent SNP C C T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . PDE4DIP NM_001002811 exon10 c.G2352A p.Q784Q CTTTCGCTGTAGA . 532.0 59.0 136.0 1.0 . 663 PEAK1 0 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 15 77425574 77425574 + Nonsense_Mutation SNP C C A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . . NM_024776 exon7 c.G3850T p.E1284X CTTCCTCCCGATT . 234.0 85.0 103.0 0.0 . . PEG10 23089 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 94293700 94293700 + Missense_Mutation SNP C C T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 PEG10,brain,glioma,-1 PEG10 NM_001172438 exon2 c.C1060T p.R354C GGTGCCCGCATGC . 50.0 18.0 16.0 0.0 . 23 PHF10 55274 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 170105298 170105298 + Missense_Mutation SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . PHF10 NM_018288 exon11 c.A1342G p.M448V ACATCATTTCTTC . 160.0 54.0 81.0 0.0 . 226 PHLPP2 23035 ucsc.edu;bcgsc.ca 37 16 71703179 71703179 + Missense_Mutation SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . PHLPP2 NM_015020 exon10 c.A1627G p.R543G CATACCTCACGGG . 35.0 4.0 33.0 0.0 . 91 PIK3C2G 5288 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 18534747 18534747 + Missense_Mutation SNP A A T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . PIK3C2G NM_004570 exon13 c.A1805T p.E602V AGAGTGAGCCTCC . 120.0 51.0 60.0 0.0 . 1312 PLCB4 5332 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 9319627 9319627 + Silent SNP A A C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . PLCB4 NM_182797 exon5 c.A312C p.T104T TGGCACAGATCTA . 126.0 42.0 60.0 2.0 . 274 PROX2 283571 broad.mit.edu;ucsc.edu;mdanderson.org 37 14 75330524 75330524 + Missense_Mutation SNP G G T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . PROX2 NM_001080408 exon1 c.C14A p.S5Y AAGATGGAGTTTG . 21.0 9.0 10.0 0.0 . 69 PTPN3 5774 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 9 112200499 112200499 + Missense_Mutation SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . PTPN3 NM_001145368 exon8 c.A482G p.Y161C GAATTATAGTCTC . 35.0 11.0 24.0 0.0 . 229 PTPRQ 374462 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 12 80998958 80998958 + Nonsense_Mutation SNP C C A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . . NM_001145026 exon24 c.C4214A p.S1405X TCAAATCGGTAAG . 102.0 34.0 63.0 0.0 . . RFXAP 5994 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 37399580 37399580 + Missense_Mutation SNP A A G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . RFXAP NM_000538 exon2 c.A616G p.I206V GATAACATACTCT . 72.0 19.0 35.0 0.0 . 91 RPS6KL1 83694 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 14 75376302 75376303 + Frame_Shift_Ins INS - - C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 - - . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . RPS6KL1 NM_031464 exon7 c.1214_1215insG p.E405fs CCCTGCTCGTGCA . 81.0 32.0 35.0 0.0 . 359 SIAH1 6477 hgsc.bcm.edu;broad.mit.edu 37 16 48395633 48395644 + In_Frame_Del DEL CAAGTCAATCGT CAAGTCAATCGT - novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 CAAGTCAATCGT CAAGTCAATCGT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . SIAH1 NM_001006610 exon2 c.789_800del p.263_267del GCTTCCCAAGTCA . 163.0 12.0 71.0 0.0 . 415 SIPA1L1 26037 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 72190408 72190408 + Missense_Mutation SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . SIPA1L1 NM_015556 exon16 c.G4316A p.S1439N TCACCAGTGCCCG . 124.0 41.0 68.0 0.0 . 156 SKIV2L2 23517 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 54635850 54635850 + Silent SNP A A G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . SKIV2L2 NM_015360 exon6 c.A528G p.A176A CATTGCATTGGCC . 198.0 108.0 71.0 0.0 . 92 SLITRK1 114798 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 84454266 84454266 + Silent SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . SLITRK1 NM_052910 exon1 c.C1377T p.I459I GAGCTGGATAGCG . 153.0 51.0 65.0 0.0 . 94 SPTBN5 51332 ucsc.edu;bcgsc.ca 37 15 42154364 42154364 + Silent SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . SPTBN5 NM_016642 exon44 c.A7407G p.E2469E CCGGGCTTCCACA . 63.0 5.0 35.0 0.0 . 91 SRCRB4D 136853 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 7 76029847 76029847 + Silent SNP G G T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . SRCRB4D NM_080744 exon4 c.C231A p.G77G CCAGGAGCCACCG . 45.0 18.0 14.0 0.0 . 91 SYNGR1 9145 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 39777778 39777778 + Missense_Mutation SNP C C A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . SYNGR1 NM_004711 exon4 c.C561A p.D187E CATGGACCCCAGC . 97.0 36.0 27.0 0.0 . 90 TAF7L 54457 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 100547906 100547906 + Missense_Mutation SNP T T A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . TAF7L NM_024885 exon1 c.A128T p.Y43F CTTTCATAGGTGG . 236.0 213.0 69.0 0.0 . 130 TBCK 93627 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 107092414 107092414 + Silent SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . TBCK NM_001163436 exon23 c.A2073G p.E691E ACAGCGTTCAATG . 255.0 96.0 112.0 0.0 . 336 TCEA1 6917 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 54912542 54912542 + Missense_Mutation SNP C C A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . TCEA1 NM_006756 exon3 c.G195T p.L65F CTTTGCCAAAGAT . 393.0 141.0 151.0 0.0 . 661 TRAPPC8 22878 broad.mit.edu;bcgsc.ca;mdanderson.org 37 18 29426694 29426694 + Silent SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . TRAPPC8 NM_014939 exon26 c.A3822G p.S1274S AGGATATGAAAAG . 135.0 10.0 81.0 1.0 . 159 TRIM46 80128 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 155151089 155151089 + Missense_Mutation SNP G G T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . TRIM46 NM_025058 exon7 c.G1285T p.V429L CTGCGAGGTAAGG . 81.0 19.0 22.0 0.0 . 228 TRPV3 162514 ucsc.edu;bcgsc.ca 37 17 3427525 3427525 + Silent SNP C C T novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . TRPV3 NM_001258205 exon13 c.G1710A p.Q570Q CATGGACTGGAAA . 40.0 5.0 28.0 0.0 . 94 TYMS 7298 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 671451 671451 + Silent SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . TYMS NM_001071 exon6 c.G804A p.Q268Q AATTCAGGTAAGA . 151.0 57.0 72.0 0.0 . 227 UGT2B7 7364 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 4 69962823 69962825 + In_Frame_Del DEL TGT TGT - novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 TGT TGT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . UGT2B7 NM_001074 exon1 c.585_587del p.195_196del CGTACCTGTTGTT . 305.0 88.0 105.0 0.0 . 92 USP49 25862 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 6 41773689 41773689 + Missense_Mutation SNP T T G novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . USP49 NM_018561 exon4 c.A1033C p.I345L TCTGGATGAGCTC . 34.0 13.0 15.0 0.0 . 523 VPS4B 9525 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 61067824 61067824 + Missense_Mutation SNP T T C novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . VPS4B NM_004869 exon6 c.A597G p.I199M GGAAGATATTGAA . 211.0 88.0 99.0 0.0 . 91 ZFYVE26 23503 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 68274238 68274238 + Missense_Mutation SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . ZFYVE26 NM_015346 exon5 c.C763T p.R255W CCTCCCGCAGGGG . 64.0 21.0 38.0 0.0 . 162 ZNF441 126068 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 11888443 11888443 + Silent SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . ZNF441 NM_152355 exon2 c.G21A p.E7E ATTTGAGGATGTG . 223.0 78.0 104.0 0.0 . 69 ZNF735 730291 hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 7 63680468 63680468 + Missense_Mutation SNP C C A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . . NM_001159524 exon4 c.C1039A p.H347N ATAATTCATACTG . 31.0 9.0 22.0 0.0 . . ZSCAN1 284312 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 58565348 58565348 + Missense_Mutation SNP G G A novel TCGA-DD-A1EA-01A-11D-A12Z-10 TCGA-DD-A1EA-10A-01D-A12Z-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq f2f6ebbe-5e4e-48ff-9782-de22a56fc3c3 ebf27981-4bd7-4636-ad4e-e6153fba6e66 . ZSCAN1 NM_182572 exon6 c.G1156A p.G386R GTCTGCGGGAAGG . 43.0 10.0 31.0 0.0 . 92