Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene TranscriptID Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq DENND5B 160518 hgsc.bcm.edu;broad.mit.edu 37 12 31604973 31604973 + Frame_Shift_Del DEL A A - novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . DENND5B NM_144973 exon5 c.1531delA p.T511fs . . 126.0 12.0 212.0 0.0 . 114 TEX101 83639 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 43920572 43920572 + Missense_Mutation SNP G G A novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . TEX101 NM_031451 exon7 c.G310A p.E104K GAAGGGGAGGAGG . 108.0 17.0 138.0 0.0 . 28 VEZF1 7716 hgsc.bcm.edu;bcgsc.ca 37 17 56056604 56056604 + Silent SNP T T C rs138088904 byfrequency TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 VEZF1,colon,carcinoma,0,7 VEZF1 NM_007146 exon5 c.A1047G p.Q349Q TTGTTGTTGCTGC . 141.0 6.0 244.0 2.0 0.001 50 LRBA 987 hgsc.bcm.edu;bcgsc.ca 37 4 151773447 151773447 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . LRBA NM_006726 exon23 c.T3415C p.S1139P CTTCAGATGCAGC . 141.0 6.0 186.0 0.0 . 253 CEPT1 10390 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 111702071 111702071 + Missense_Mutation SNP G G T novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . CEPT1 NM_006090 exon3 c.G409T p.G137W ATTGATGGGAAAC . 273.0 11.0 345.0 0.0 . 25 NTPCR 84284 hgsc.bcm.edu;bcgsc.ca 37 1 233105712 233105712 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . NTPCR NM_032324 exon4 c.A352G p.M118V GGGAAGATGGAGC . 73.0 4.0 130.0 0.0 . 15 TPX2 22974 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 20 30365314 30365314 + Missense_Mutation SNP G G T novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . TPX2 NM_012112 exon9 c.G755T p.S252I CAGTGAGCCAGGT . 81.0 8.0 145.0 0.0 . 61 TTC40 54777 hgsc.bcm.edu;bcgsc.ca 37 10 134672635 134672635 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . TTC40 NM_001200049 exon38 c.T5315C p.I1772T CAGTCGATAAACT . 74.0 4.0 162.0 0.0 . 100 SACM1L 22908 hgsc.bcm.edu;bcgsc.ca 37 3 45744960 45744960 + Silent SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . SACM1L NM_014016 exon2 c.A63G p.E21E TGTGGAAGCTTGT . 81.0 4.0 137.0 0.0 . 38 ZSWIM2 151112 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 187693106 187693106 + Missense_Mutation SNP C C A novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ZSWIM2 NM_182521 exon9 c.G1507T p.V503L ATGACACAGTGGG . 188.0 25.0 238.0 0.0 . 119 CYP1A2 1544 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 15 75047231 75047231 + Silent SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . CYP1A2 NM_000761 exon7 c.T1353C p.F451F GCTGTTTGGCATG . 64.0 8.0 151.0 0.0 . 70 TTC4 7268 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 1 55182348 55182348 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . TTC4 NM_004623 exon2 c.T187C p.C63R TTGGCTTGTCTCC . 46.0 5.0 75.0 0.0 . 21 CUBN 8029 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 17153015 17153015 + Missense_Mutation SNP G G C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . CUBN NM_001081 exon9 c.C918G p.I306M TTCATTGATATCT . 65.0 11.0 109.0 0.0 . 515 CDC27 996 hgsc.bcm.edu;bcgsc.ca 37 17 45234327 45234327 + Missense_Mutation SNP C C T rs7350889 bycluster;byhapmap TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 CDC27_ENST00000531206,NS,adenoma,0,4 CDC27 NM_001114091 exon7 c.G794A p.G265D CTTCGACCAGTTT . 110.0 8.0 147.0 1.0 . 337 DSG3 1830 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 18 29045290 29045290 + Missense_Mutation SNP G G C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . DSG3 NM_001944 exon10 c.G1281C p.M427I TGTCATGGGACGT . 179.0 12.0 277.0 0.0 . 172 MOCS2 4338 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 5 52402917 52402917 + Nonsense_Mutation SNP C C A novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . MOCS2 NM_004531 exon3 c.G88T p.E30X ATGGCTCAAAAGC . 58.0 12.0 91.0 0.0 . 28 ATRX 546 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 76972657 76972657 + Silent SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ATRX NM_138270 exon2 c.A84G p.E28E TTCAGATTCTTCT . 55.0 7.0 84.0 0.0 . 833 CEP97 79598 hgsc.bcm.edu;bcgsc.ca 37 3 101445525 101445525 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . CEP97 NM_024548 exon2 c.A131G p.D44G TTCTGGATAAAAA . 73.0 4.0 95.0 0.0 . 122 ASTE1 28990 hgsc.bcm.edu;bcgsc.ca 37 3 130733158 130733158 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ASTE1 NM_014065 exon6 c.A1783G p.S595G ATATGCTCAGGAG . 121.0 5.0 225.0 0.0 . 67 CXorf22 170063 hgsc.bcm.edu;bcgsc.ca 37 X 35966467 35966467 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . CXorf22 NM_152632 exon4 c.T554C p.I185T TACCCATCCTCAT . 52.0 5.0 78.0 0.0 . 272 PIK3CA 5290 hgsc.bcm.edu;bcgsc.ca 37 3 178943817 178943817 + Silent SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . PIK3CA NM_006218 exon17 c.T2484C p.G828G TCAAGGTCTTGAT . 75.0 4.0 142.0 0.0 . 8460 MED13L 23389 hgsc.bcm.edu;bcgsc.ca 37 12 116413459 116413459 + Missense_Mutation SNP C C T novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . MED13L NM_015335 exon24 c.G5449A p.G1817S CCTCACCAAACGT . 75.0 4.0 138.0 0.0 . 193 ANKRD32 84250 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 5 93964624 93964624 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ANKRD32 NM_032290 exon2 c.A109G p.S37G ATTAAGAGTGAGG . 83.0 4.0 103.0 0.0 . 117 LAMA1 284217 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 7016513 7016513 + Missense_Mutation SNP G G T novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . LAMA1 NM_005559 exon21 c.C2966A p.A989D TGGTAGGCGTAGA . 56.0 10.0 66.0 0.0 . 458 INHA 3623 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 2 220439447 220439447 + Silent SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . INHA NM_002191 exon2 c.A300G p.R100R TGCCAGAGGGCTG . 78.0 4.0 113.0 0.0 . 30 MPDZ 8777 hgsc.bcm.edu;bcgsc.ca 37 9 13150535 13150535 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . MPDZ NM_003829 exon25 c.T3605C p.L1202S GGTTTCAAGGTTC . 89.0 5.0 157.0 0.0 . 324 FBN2 2201 hgsc.bcm.edu;bcgsc.ca 37 5 127712455 127712455 + Silent SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . FBN2 NM_001999 exon14 c.T1941C p.F647F CAAGACAAATCCT . 85.0 4.0 160.0 0.0 . 858 ZNF639 51193 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 3 179051221 179051221 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ZNF639 NM_016331 exon7 c.A469G p.N157D ACAGAAAACAATT . 152.0 7.0 230.0 0.0 . 45 CEP350 9857 hgsc.bcm.edu;bcgsc.ca 37 1 180062484 180062484 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . CEP350 NM_014810 exon34 c.A7244G p.K2415R GAGATAAGCCACA . 149.0 6.0 214.0 0.0 . 418 MFSD2B 388931 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 2 24236185 24236185 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . MFSD2B NM_001080473 exon2 c.A127G p.T43A TTCTGTACAAAGG . 41.0 4.0 75.0 0.0 . 45 ULK2 9706 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 17 19705089 19705089 + Splice_Site SNP C C A novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ULK2 NM_014683 exon17 c.1441+1G>T . TACTTACCCAAAG . 71.0 8.0 98.0 0.0 . 142 TMC1 117531 hgsc.bcm.edu;bcgsc.ca 37 9 75403363 75403363 + Silent SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . TMC1 NM_138691 exon14 c.A993G p.A331A AACAGCAGACAAC . 90.0 4.0 122.0 0.0 . 87 ANGPT2 285 hgsc.bcm.edu;bcgsc.ca 37 8 6420324 6420324 + Silent SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ANGPT2 NM_001118888 exon1 c.T132C p.T44T GAGGAAAGTGTAG . 92.0 4.0 195.0 0.0 . 126 PIWIL3 440822 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 25153964 25153964 + Missense_Mutation SNP G G A novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . PIWIL3 NM_001008496 exon4 c.C266T p.P89L TGCAAGGGCGCTG . 95.0 20.0 177.0 0.0 . 115 SUGT1 10910 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 13 53237230 53237230 + Splice_Site SNP G G C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . SUGT1 NM_001130912 exon8 c.479-1G>C . TTAATAGGCTCAG . 187.0 16.0 278.0 0.0 . 37 STRIP2 57464 hgsc.bcm.edu;bcgsc.ca 37 7 129079892 129079892 + Silent SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . . NM_020704 exon2 c.T159C p.F53F GGAGTTTGAGTAT . 169.0 7.0 267.0 0.0 . . CTNNB1 1499 hgsc.bcm.edu;bcgsc.ca 37 3 41266610 41266610 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . CTNNB1 NM_001098209 exon4 c.T407C p.V136A ATGCAGTTGTAAA . 69.0 12.0 77.0 0.0 . 4904 GPR161 23432 hgsc.bcm.edu;bcgsc.ca 37 1 168066409 168066409 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . GPR161 NM_001267609 exon4 c.A496G p.M166V GTGCCATCACAGC . 72.0 4.0 102.0 0.0 . 56 DHDH 27294 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 49442937 49442937 + Missense_Mutation SNP G G T rs35453148 bycluster;byfrequency;by1000genomes;alternate_allele TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 DHDH,brainstem,primitive_neuroectodermal_tumour-medulloblastoma,0,1 DHDH NM_014475 exon4 c.G598T p.V200L TCTGTCGTGGGAA . 32.0 4.0 52.0 0.0 . 35 SV2C 22987 hgsc.bcm.edu;bcgsc.ca 37 5 75587051 75587051 + Silent SNP C C T novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . SV2C NM_014979 exon7 c.C1143T p.N381N GGTAAACAAAATA . 113.0 5.0 152.0 0.0 . 97 CPSF2 53981 hgsc.bcm.edu;bcgsc.ca 37 14 92621560 92621560 + Silent SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . CPSF2 NM_017437 exon11 c.T1335C p.G445G GAAAGGTGAAGGC . 117.0 5.0 135.0 0.0 . 63 ZNF2 7549 hgsc.bcm.edu;bcgsc.ca 37 2 95843262 95843262 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ZNF2 NM_021088 exon3 c.T68C p.F23S TGGTTTTCACAGA . 80.0 5.0 153.0 0.0 . 21 CXorf57 55086 hgsc.bcm.edu;bcgsc.ca 37 X 105876229 105876229 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . CXorf57 NM_018015 exon5 c.A1156G p.R386G GTAGGAAGGGTCC . 186.0 8.0 238.0 0.0 . 107 THUMPD3 25917 hgsc.bcm.edu;bcgsc.ca 37 3 9425958 9425958 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . THUMPD3 NM_001114092 exon9 c.T1298C p.V433A GCCGTGTCTGCAC . 82.0 4.0 145.0 0.0 . 46 KIRREL2 84063 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 19 36350514 36350514 + Silent SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . KIRREL2 NM_199180 exon5 c.T654C p.A218A CACAGCTATCACA . 40.0 4.0 40.0 0.0 . 170 ROS1 6098 hgsc.bcm.edu;bcgsc.ca 37 6 117718268 117718268 + Missense_Mutation SNP C C T novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ROS1 NM_002944 exon7 c.G589A p.A197T AAGGTGCAGTTTC . 96.0 4.0 158.0 0.0 . 728 CHAMP1 283489 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 115089644 115089644 + Silent SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . . NM_001164144 exon3 c.T327C p.P109P AAGCCCTCCTCTT . 158.0 24.0 268.0 0.0 . . FBN1 2200 hgsc.bcm.edu;bcgsc.ca 37 15 48752514 48752514 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . FBN1 NM_000138 exon43 c.A5225G p.D1742G AACTCATCTGCAA . 72.0 5.0 87.0 0.0 . 310 CNTRL 11064 hgsc.bcm.edu;bcgsc.ca 37 9 123874744 123874744 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . CNTRL NM_007018 exon7 c.A1010G p.Q337R TAAAACAGAAGAC . 76.0 4.0 133.0 0.0 . 161 HHIP 64399 hgsc.bcm.edu;bcgsc.ca 37 4 145636456 145636456 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . HHIP NM_022475 exon10 c.T1552C p.F518L AGGAATTTCCTAA . 95.0 5.0 131.0 0.0 . 100 GPATCH1 55094 hgsc.bcm.edu;bcgsc.ca 37 19 33579153 33579153 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . GPATCH1 NM_018025 exon2 c.A187G p.N63D TACTTCAATACTG . 100.0 4.0 200.0 0.0 . 79 TCAP 8557 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 37822111 37822111 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . TCAP NM_003673 exon2 c.T253C p.Y85H CTGCCCTACCAGC . 43.0 8.0 56.0 0.0 . 12 ZNF320 162967 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 19 53384285 53384285 + Missense_Mutation SNP G G A novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ZNF320 NM_207333 exon4 c.C1094T p.A365V CGGAAAGCCTTGT . 111.0 5.0 157.0 0.0 . 67 CNKSR2 22866 hgsc.bcm.edu;bcgsc.ca 37 X 21458842 21458842 + Silent SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . CNKSR2 NM_001168647 exon4 c.A462G p.S154S CTATTCAGTTACA . 55.0 4.0 60.0 0.0 . 158 ZNF471 57573 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 57027722 57027722 + Missense_Mutation SNP T T G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ZNF471 NM_020813 exon3 c.T112G p.L38V AAGCGTTTATACA . 163.0 16.0 255.0 0.0 . 99 TXNL4B 54957 hgsc.bcm.edu;bcgsc.ca 37 16 72120695 72120695 + Silent SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . TXNL4B NM_001142318 exon4 c.A291G p.P97P GTGATCTGGAGAT . 109.0 5.0 157.0 0.0 . 17 ABHD1 84696 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 27351823 27351823 + Missense_Mutation SNP C C A rs370556895 alternate_allele TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ABHD1 NM_032604 exon3 c.C286A p.Q96K ATCCTCCAAACAC . 71.0 8.0 103.0 0.0 . 18 IMPACT 55364 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 22029801 22029801 + Missense_Mutation SNP G G A novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . IMPACT NM_018439 exon10 c.G778A p.V260I AAGAATGTCATGG . 93.0 11.0 123.0 0.0 . 37 MMS22L 253714 hgsc.bcm.edu;bcgsc.ca 37 6 97627437 97627437 + Splice_Site SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . MMS22L NM_198468 exon18 c.2385-2A>G . ATGTGCTGTAGAA . 55.0 4.0 61.0 0.0 . 102 METTL12 751071 hgsc.bcm.edu;bcgsc.ca 37 11 62434058 62434058 + Silent SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . METTL12 NM_001043229 exon3 c.T258C p.T86T TGGGACTTCCAGC . 77.0 5.0 87.0 0.0 . 11 LRRCC1 85444 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 86022370 86022370 + Silent SNP C C T novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . LRRCC1 NM_033402 exon3 c.C331T p.L111L ATTAATCTGACTA . 107.0 22.0 123.0 0.0 . 212 CUBN 8029 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 10 17024537 17024537 + Silent SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . CUBN NM_001081 exon31 c.T4641C p.R1547R GAGAACACGATGA . 58.0 7.0 87.0 0.0 . 515 NUP98 4928 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 11 3720345 3720345 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . NUP98 NM_016320 exon25 c.A3976G p.I1326V CACTGATCCTTTT . 94.0 8.0 139.0 0.0 . 149 ARF4 378 hgsc.bcm.edu;bcgsc.ca 37 3 57563094 57563094 + Silent SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ARF4 NM_001660 exon4 c.T279C p.D93D GTTGCTATCTACC . 90.0 4.0 175.0 0.0 . 14 TUBA1B 10376 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 49522077 49522077 + Silent SNP G G A novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . TUBA1B NM_006082 exon4 c.C1020T p.S340S CTGGATGCTGCGC . 182.0 32.0 282.0 0.0 . 24 FARP1 10160 hgsc.bcm.edu;bcgsc.ca 37 13 99063059 99063059 + Silent SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . FARP1 NM_005766 exon15 c.T1674C p.D558D GAAGGATCTCGAA . 148.0 6.0 224.0 0.0 . 207 DGKA 1606 hgsc.bcm.edu;bcgsc.ca 37 12 56345833 56345833 + Silent SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . DGKA NM_201554 exon19 c.T1602C p.A534A TATTGCTCATCGA . 73.0 5.0 121.0 0.0 . 70 IDH2 3418 hgsc.bcm.edu;bcgsc.ca 37 15 90628063 90628063 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . IDH2 NM_002168 exon10 c.T1256C p.I419T CCGTGAATGCAGC . 69.0 4.0 87.0 0.0 . 1372 ZC3H18 124245 hgsc.bcm.edu;bcgsc.ca 37 16 88666240 88666240 + Silent SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ZC3H18 NM_144604 exon6 c.T972C p.D324D GCCTGATTTTGAA . 64.0 4.0 106.0 0.0 . 90 PCDH19 57526 hgsc.bcm.edu;bcgsc.ca 37 X 99657571 99657571 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . PCDH19 NM_001184880 exon3 c.A2567G p.Q856R GGCCCCTGGCTGT . 69.0 4.0 139.0 0.0 . 269 COA5 493753 hgsc.bcm.edu;bcgsc.ca 37 2 99217252 99217252 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . . NM_001008215 exon3 c.A188G p.D63G CTGTTATCCAACT . 81.0 4.0 120.0 0.0 . . SSPO 23145 hgsc.bcm.edu;ucsc.edu;bcgsc.ca 37 7 149500388 149500388 + Silent SNP C C T novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . . NM_198455 exon53 c.C7914T p.S2638S ACCCTCCTGCCTG . 39.0 5.0 48.0 0.0 . . POU5F2 134187 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 93076777 93076777 + Missense_Mutation SNP A A C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . POU5F2 NM_153216 exon1 c.T493G p.C165G AGCGGCAGATGGT . 45.0 7.0 71.0 0.0 . 10 CEP63 80254 hgsc.bcm.edu;bcgsc.ca 37 3 134270832 134270832 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . CEP63 NM_025180 exon13 c.A1445G p.K482R TGATGAAATTGGA . 56.0 4.0 90.0 0.0 . 56 SLC6A1 6529 hgsc.bcm.edu;bcgsc.ca 37 3 11072874 11072874 + Silent SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . SLC6A1 NM_003042 exon13 c.T1335C p.Y445Y TATTTATGTCTTC . 92.0 5.0 144.0 0.0 . 88 C1orf131 128061 hgsc.bcm.edu;bcgsc.ca 37 1 231360124 231360124 + Silent SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . C1orf131 NM_152379 exon7 c.A783G p.S261S TCCATTTGACAAA . 165.0 9.0 220.0 0.0 . 30 SPATA6L 55064 hgsc.bcm.edu;bcgsc.ca 37 9 4604223 4604223 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . SPATA6L NM_001039395 exon10 c.A962G p.Y321C AGAGGGTAGCTTG . 111.0 6.0 155.0 0.0 . 3 STXBP4 252983 hgsc.bcm.edu;bcgsc.ca 37 17 53155463 53155463 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . STXBP4 NM_178509 exon14 c.A1213G p.R405G AAAAAGAGAATCA . 121.0 5.0 154.0 0.0 . 41 PHACTR3 116154 hgsc.bcm.edu;broad.mit.edu 37 20 58342290 58342290 + Silent SNP C C A novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . PHACTR3 NM_080672 exon5 c.C591A p.L197L CAGCCTCCTGCCC . 103.0 7.0 145.0 0.0 . 104 ATP5B 506 ucsc.edu;bcgsc.ca 37 12 57038965 57038965 + Silent SNP G G A novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ATP5B NM_001686 exon2 c.C300T p.A100A ATGCTGGGCCACC . 69.0 0.0 93.0 1.0 . 91 EIF4G2 1982 broad.mit.edu;ucsc.edu 37 11 10825934 10825934 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . EIF4G2 NM_001042559 exon6 c.A383G p.Y128C GAGCTATACTTTG . 180.0 0.0 183.0 0.0 . 91 F8 2157 ucsc.edu;bcgsc.ca 37 X 154124423 154124423 + Missense_Mutation SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . F8 NM_000132 exon22 c.T6358C p.F2120L TGATAAACTGAGA . 85.0 0.0 63.0 1.0 . 182 FNIP1 96459 broad.mit.edu;bcgsc.ca 37 5 131008597 131008597 + Missense_Mutation SNP C C T novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . FNIP1 NM_133372 exon14 c.G1540A p.G514S GAGAGCCAATAGC . 66.0 0.0 98.0 0.0 . 92 GRM2 2912 broad.mit.edu;bcgsc.ca 37 3 51749655 51749664 + Frame_Shift_Del DEL CTTCATTGCC CTTCATTGCC - novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 CTTCATTGCC CTTCATTGCC . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . GRM2 NM_000839 exon4 c.1866_1875del p.622_625del CTTCATCTTCATT . 220.0 0.0 200.0 0.0 . 522 IL6ST 3572 broad.mit.edu;bcgsc.ca 37 5 55260061 55260075 + In_Frame_Del DEL AATACACAGTAGAAT AATACACAGTAGAAT - novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 AATACACAGTAGAAT AATACACAGTAGAAT . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . IL6ST NM_175767 exon6 c.557_571del p.186_191del TGACAAAATACAC . 299.0 0.0 326.0 0.0 . 290 MAP2 4133 broad.mit.edu;bcgsc.ca 37 2 210560370 210560370 + Missense_Mutation SNP C C G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . MAP2 NM_002374 exon7 c.C3476G p.S1159C AATCATCTCTAAT . 176.0 0.0 143.0 1.0 . 591 PDE1B 5153 ucsc.edu;bcgsc.ca 37 12 54970385 54970385 + Silent SNP G G A novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . PDE1B NM_000924 exon14 c.G1407A p.V469V GGATGTGGAAGTG . 72.0 0.0 73.0 0.0 . 92 PLCG2 5336 broad.mit.edu;ucsc.edu 37 16 81819689 81819689 + Missense_Mutation SNP G G A novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . PLCG2 NM_002661 exon2 c.G95A p.S32N TGTTCAGCTTCCG . 104.0 0.0 100.0 0.0 . 892 SLC10A2 6555 broad.mit.edu;ucsc.edu;bcgsc.ca 37 13 103698606 103698606 + Silent SNP A A G novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . SLC10A2 NM_000452 exon6 c.T924C p.Y308Y TGCCACATAAACT . 241.0 0.0 235.0 2.0 . 94 STAU1 6780 ucsc.edu;bcgsc.ca 37 20 47741040 47741040 + Missense_Mutation SNP T T C novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 T T . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . STAU1 NM_017453 exon7 c.A694G p.K232E TGCTTTTCCCTTC . 108.0 0.0 78.0 0.0 . 230 ZNF271 10778 broad.mit.edu;bcgsc.ca 37 18 32889822 32889822 + RNA SNP G G T novel TCGA-DD-A1ED-01A-11D-A152-10 TCGA-DD-A1ED-10A-01D-A152-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq 4c3eda94-56f4-46d3-8c88-50d476e773f6 09455f77-1bc1-4f4b-9b75-dd79fd3237c3 . ZNF271 . . . . ACATGAGATTGGT . 71.0 0.0 91.0 0.0 . 90