Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene TranscriptID Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq A1CF 29974 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 52603787 52603787 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . A1CF NM_001198820 exon5 c.A219T p.R73R AAGGTCTCGGGGA . 133.0 55.0 185.0 0.0 . 68 ABCA1 19 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 107620923 107620923 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ABCA1 NM_005502 exon7 c.A600T p.S200S CTCTTCTGATTTT . 81.0 70.0 139.0 0.0 . 1016 ABCA12 26154 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 215813373 215813373 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ABCA12 NM_173076 exon47 c.C7051A p.H2351N ACAAATGTTCTTC . 143.0 68.0 147.0 1.0 . 99 ABCA13 154664 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 7 48559635 48559635 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ABCA13 NM_152701 exon53 c.13798-2A>T . CTGTGCAGAATTT . 39.0 10.0 62.0 0.0 . 521 ABCA13 154664 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 48314790 48314790 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ABCA13 NM_152701 exon17 c.G5527T p.V1843F TGCAATGTCCATG . 66.0 27.0 84.0 0.0 . 521 ABCA13 154664 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 48412076 48412076 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ABCA13 NM_152701 exon33 c.T11115C p.F3705F AAGTTTTGTTAAT . 53.0 21.0 48.0 0.0 . 521 ABCA13 154664 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 48431709 48431709 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ABCA13 NM_152701 exon38 c.A11846T p.K3949M GGACCAAGAAGGA . 126.0 53.0 127.0 0.0 . 521 ABCA13 154664 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 48528889 48528889 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ABCA13 NM_152701 exon48 c.C13239A p.N4413K TCTAAACAACCTT . 169.0 62.0 205.0 0.0 . 521 ABCA3 21 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 2348543 2348543 + Splice_Site SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ABCA3 NM_001089 exon16 c.1742-2A>G . GAGACCTGGGGCC . 74.0 31.0 62.0 0.0 . 1015 ABCA7 10347 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 1042061 1042061 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ABCA7 NM_019112 exon5 c.303-2A>T . GTCCCCAGGGTCT . 13.0 4.0 19.0 0.0 . 98 ABCB5 340273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 20683101 20683101 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ABCB5 NM_001163941 exon7 c.G524C p.S175T AAATCAGTGATGG . 96.0 11.0 102.0 0.0 . 158 ABCB5 340273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 20778743 20778743 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ABCB5 NM_001163941 exon24 c.G3005T p.S1002I GCCGCAGTCAAGA . 70.0 25.0 54.0 0.0 . 158 ABCD2 225 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 40010969 40010969 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ABCD2 NM_005164 exon2 c.T941A p.V314E ATTTCTACCTATA . 71.0 34.0 71.0 0.0 . 95 ABHD2 11057 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 15 89694906 89694906 + Splice_Site SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ABHD2 NM_152924 exon4 c.195-2A>G . TTCTTTAGATACA . 64.0 32.0 81.0 0.0 . 227 ACAN 176 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 89388804 89388804 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ACAN NM_001135 exon7 c.A1120G p.T374A GTCCAGACAGTGA . 75.0 36.0 92.0 0.0 . 25 ACSM3 6296 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 20788756 20788756 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ACSM3 NM_005622 exon4 c.A492T p.Q164H ACTACAATCTTCA . 91.0 46.0 107.0 0.0 . 91 ADAD1 132612 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 123336766 123336766 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAD1 NM_139243 exon11 c.T1482A p.T494T GATCACTGAAAGG . 82.0 36.0 98.0 0.0 . 90 ADAD2 161931 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 84230327 84230327 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAD2 NM_139174 exon10 c.T1847C p.V616A GGGCTGTGGGGAA . 26.0 24.0 58.0 0.0 . 68 ADAM17 6868 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 9668050 9668050 + Missense_Mutation SNP T T G rs34431503 byfrequency;alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAM17 NM_003183 exon5 c.A484C p.K162Q TTCTTTTGTCTTT . 75.0 41.0 83.0 0.0 T|0.996;C|0.004 659 ADAM23 8745 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 207346034 207346034 + Splice_Site SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAM23 NM_003812 exon3 c.509+2T>C . AACAAGTGAGTAT . 241.0 112.0 238.0 0.0 . 228 ADAM23 8745 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 207424750 207424750 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAM23 NM_003812 exon11 c.T1077A p.I359I TCAGATTGACATC . 60.0 21.0 87.0 0.0 . 228 ADAM23 8745 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 207436495 207436495 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAM23 NM_003812 exon17 c.G1611T p.G537G CAACGGGGCTCAC . 50.0 18.0 45.0 0.0 . 228 ADAM29 11086 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 175897487 175897487 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAM29 NM_001130703 exon4 c.A811C p.K271Q TATTGCAAGTGGA . 117.0 50.0 152.0 0.0 . 729 ADAM29 11086 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 175897603 175897603 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAM29 NM_001130703 exon4 c.A927T p.P309P TACACCACACCGT . 155.0 56.0 243.0 0.0 . 729 ADAM29 11086 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 175899050 175899050 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAM29 NM_001130703 exon4 c.C2374A p.P792T TTGACGCCTTCCC . 108.0 28.0 174.0 0.0 . 729 ADAM7 8756 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 24346837 24346837 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAM7 NM_003817 exon12 c.C1257T p.G419G CTGTGGCCCTGCT . 32.0 24.0 53.0 0.0 . 230 ADAMTS2 9509 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 178566986 178566986 + Silent SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAMTS2 NM_014244 exon11 c.G1680C p.R560R GCCGTCCCGTTTG . 22.0 10.0 59.0 0.0 . 228 ADAMTS3 9508 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 73414452 73414452 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAMTS3 NM_014243 exon3 c.A247G p.N83D TGATGTTAAAGAA . 92.0 42.0 131.0 0.0 . 651 ADAMTS5 11096 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 28306845 28306845 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAMTS5 NM_007038 exon4 c.A1629T p.G543G CCCCTTTCCACAA . 83.0 38.0 114.0 0.0 . 229 ADAMTS8 11095 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 130278692 130278692 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAMTS8 NM_007037 exon7 c.A1894T p.R632W CGCTCCTCCCCCG . 49.0 20.0 74.0 0.0 . 226 ADAMTSL1 92949 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 18892464 18892464 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAMTSL1 NM_001040272 exon26 c.A4721G p.K1574R GTCAAAAGCTGAA . 66.0 27.0 61.0 0.0 . 230 ADAMTSL4 54507 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 150526448 150526448 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAMTSL4 NM_019032 exon6 c.C981A p.R327R GCCCCGCCTGGAG . 102.0 27.0 44.0 0.0 . 92 ADAR 103 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 154573591 154573591 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADAR NM_015840 exon2 c.A1527G p.L509L ATATTCTAACAGC . 204.0 65.0 83.0 0.0 . 157 ADC 113451 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 33557811 33557811 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADC NM_052998 exon6 c.A440T p.H147L AGAGCCACCCCAG . 166.0 69.0 219.0 0.0 . 92 ADCY1 107 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 45632453 45632453 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADCY1 NM_021116 exon2 c.G735T p.Q245H CCTGCAGGCCCGG . 124.0 62.0 111.0 0.0 . 95 ADCY1 107 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 45717819 45717819 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADCY1 NM_021116 exon10 c.C1855T p.L619L CTCATCCTGGCTG . 114.0 48.0 105.0 0.0 . 95 ADCY2 108 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 7817092 7817092 + Silent SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADCY2 NM_020546 exon23 c.G2997C p.V999V GCGAGTGGGTACG . 104.0 42.0 169.0 0.0 . 97 ADCY4 196883 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 14 24792119 24792119 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADCY4 NM_001198592 exon19 c.T2333A p.L778X GAGTCCAAGGGGC . 68.0 41.0 55.0 0.0 . 93 ADRA1D 146 broad.mit.edu;mdanderson.org 37 20 4202598 4202598 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADRA1D NM_000678 exon2 c.T1291G p.W431G CACGCCAGAGAGG . 19.0 6.0 13.0 0.0 . 522 ADRA1D 146 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 4228555 4228555 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADRA1D NM_000678 exon1 c.G1050T p.L350L GATGGCCAGAGTC . 165.0 70.0 218.0 1.0 . 522 ADRB2 154 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 148206948 148206948 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ADRB2 NM_000024 exon1 c.A554G p.Y185C ACTGCTATGCCAA . 51.0 19.0 53.0 0.0 . 523 AFF2 2334 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 147967466 147967466 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AFF2 NM_002025 exon8 c.A1310T p.E437V ACCTTGAGCCTGT . 48.0 43.0 55.0 0.0 . 135 AGAP2 116986 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 58121778 58121778 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AGAP2 NM_001122772 exon15 c.A2708T p.Q903L ATGGCCTGGACCC . 59.0 26.0 49.0 0.0 . 716 AGAP7 653268 broad.mit.edu;bcgsc.ca;mdanderson.org 37 10 51465326 51465326 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001077685 exon7 c.A1130G p.K377R TGTTTCTTTTTAT . 73.0 36.0 96.0 0.0 . . AGBL1 123624 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 86702252 86702252 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_152336 exon4 c.A345C p.A115A CCAAGCAATCAGG . 81.0 41.0 86.0 0.0 . . AGBL1 123624 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 86823010 86823010 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_152336 exon15 c.T2078A p.L693H CAGCCCTCATGGT . 110.0 54.0 106.0 0.0 . . AGBL1 123624 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 87097675 87097675 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_152336 exon20 c.C2763A p.S921S AGCTTCCACGGCC . 63.0 30.0 77.0 0.0 . . AGFG1 3267 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 228398301 228398301 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AGFG1 NM_001135187 exon8 c.A923T p.H308L TTGCTCATTTTGA . 86.0 39.0 109.0 0.0 . 228 AGO1 26523 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 36383941 36383941 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_012199 exon17 c.A2182G p.I728V GGTAACATCCCAG . 108.0 47.0 135.0 0.0 . . AHNAK2 113146 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 105413692 105413692 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AHNAK2 NM_138420 exon7 c.A8096T p.Q2699L GGGGGCTGAATGC . 120.0 49.0 214.0 0.0 . 47 AHNAK2 113146 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 105420987 105420987 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AHNAK2 NM_138420 exon7 c.A801G p.I267M GCTCTTTATGGAT . 24.0 19.0 48.0 0.0 . 47 AHNAK 79026 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 62285505 62285505 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AHNAK NM_001620 exon5 c.A16384G p.K5462E TCCCTTTCACTTT . 82.0 41.0 86.0 0.0 . 109 AHNAK 79026 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 62288328 62288328 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AHNAK NM_001620 exon5 c.A13561G p.M4521V CACTCATGGAGAT . 98.0 29.0 111.0 0.0 . 109 AHNAK 79026 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 62289734 62289734 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AHNAK NM_001620 exon5 c.A12155G p.H4052R GGGCCATGAACAT . 70.0 34.0 81.0 0.0 . 109 AIM2 9447 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 159038418 159038418 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AIM2 NM_004833 exon3 c.A336T p.A112A GATGGCTGCAGAT . 162.0 108.0 84.0 0.0 . 93 AKAP13 11214 hgsc.bcm.edu;bcgsc.ca;mdanderson.org 37 15 86286977 86286977 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AKAP13 NM_006738 exon36 c.C8325A p.T2775T CTCTACCCGCCTG . 101.0 15.0 138.0 0.0 . 258 AKAP1 8165 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 55187406 55187406 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AKAP1 NM_001242902 exon4 c.G1735T p.D579Y AGCATGGATTCCG . 77.0 27.0 77.0 0.0 . 227 AKAP9 10142 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 7 91724335 91724335 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AKAP9 NM_005751 exon40 c.9579-2A>T . TGACTTAGGTTGG . 60.0 29.0 85.0 0.0 . 755 AKNA 80709 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 117106039 117106039 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AKNA NM_030767 exon19 c.A3706G p.N1236D TGCCATTGCCTTT . 63.0 44.0 113.0 0.0 . 94 AKNA 80709 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 117118383 117118383 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AKNA NM_030767 exon14 c.A2880T p.A960A CACAGATGCAGCA . 30.0 21.0 75.0 0.0 . 94 ALG10B 144245 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 38710709 38710709 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ALG10B NM_001013620 exon1 c.A14G p.E5G AGCTAGAGGGTTA . 64.0 27.0 61.0 1.0 . 93 ALPK1 80216 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 113303587 113303587 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ALPK1 NM_001102406 exon4 c.A155T p.Q52L TGATCCAGGAGGC . 215.0 105.0 243.0 1.0 . 337 ALS2CR8 79800 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 203834660 203834660 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ALS2CR8 NM_024744 exon11 c.A972G p.V324V AAAGGTACAGAAG . 200.0 108.0 256.0 0.0 . 136 ALX4 60529 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 44297157 44297157 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ALX4 NM_021926 exon2 c.T518A p.V173E ATCCCCACAGTGT . 52.0 26.0 45.0 0.0 . 90 AMPD1 270 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 115218238 115218238 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AMPD1 NM_000036 exon12 c.A1691T p.Q564L CACTCCTGGGGCT . 58.0 31.0 50.0 0.0 . 293 AMPH 273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 38500915 38500915 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AMPH NM_139316 exon11 c.G985T p.V329F CTGGAACAAAGTT . 75.0 37.0 73.0 0.0 . 95 ANK1 286 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 41519015 41519015 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ANK1 NM_000037 exon42 c.A5612T p.K1871M GCCCGCTTCACTA . 44.0 16.0 44.0 0.0 . 716 ANK2 287 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 114278661 114278661 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ANK2 NM_001148 exon38 c.A8887G p.T2963A TCTGTTACCATCA . 87.0 39.0 114.0 0.0 . 583 ANK3 288 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 61956318 61956318 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ANK3 NM_020987 exon15 c.A1755C p.L585L TTTCTGTAGCAGG . 41.0 19.0 48.0 1.0 . 107 ANK3 288 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 61829458 61829458 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ANK3 NM_020987 exon37 c.T11181G p.S3727S GGATGCAGAAATT . 66.0 24.0 101.0 0.0 . 107 ANKRD11 29123 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 89348451 89348451 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ANKRD11 NM_001256183 exon9 c.A4499C p.Q1500P GGCTTCTGCTCGT . 11.0 10.0 36.0 0.0 . 139 ANKRD11 29123 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 89350278 89350278 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ANKRD11 NM_001256183 exon9 c.A2672G p.D891G CGGCTGTCCCGCC . 41.0 38.0 79.0 0.0 . 139 ANKRD24 170961 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 4207906 4207906 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ANKRD24 NM_133475 exon10 c.G773A p.G258E TGGCGGGGGACAA . 82.0 38.0 88.0 0.0 . 68 ANKUB1 389161 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 149485426 149485426 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001144960 exon5 c.A1023G p.A341A AACTTTTGCCCCA . 44.0 21.0 44.0 0.0 . . ANLN 54443 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 36436005 36436005 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ANLN NM_018685 exon2 c.A149T p.Q50L GTAACCAGCAGCC . 143.0 69.0 187.0 0.0 . 517 ANO9 338440 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 430368 430368 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ANO9 NM_001012302 exon8 c.T575A p.V192D AGCCAGACGAAGT . 97.0 85.0 233.0 1.0 . 227 ANTXR1 84168 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 69304560 69304560 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ANTXR1 NM_032208 exon8 c.T582C p.S194S GGACAGTAAGGAT . 63.0 26.0 78.0 0.0 . 94 ANTXR2 118429 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 80899212 80899212 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ANTXR2 NM_001145794 exon15 c.A1296T p.R432R TTTGGGTCGAGGT . 127.0 45.0 171.0 1.0 . 23 AOC3 8639 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 41004309 41004309 + Missense_Mutation SNP T T A rs438287 byfrequency;alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AOC3 NM_003734 exon1 c.T949A p.Y317N CAGTTCTATCCCC . 55.0 26.0 42.0 0.0 T|0.720;C|0.280 516 AOX1 316 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 201469552 201469552 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AOX1 NM_001159 exon9 c.A803G p.N268S TGGGAAACACCTC . 71.0 29.0 102.0 0.0 . 96 AP4E1 23431 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 51289653 51289653 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AP4E1 NM_007347 exon18 c.A2477G p.Y826C TGGCATATGAAGA . 88.0 31.0 74.0 0.0 . 90 APC2 10297 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 1460853 1460853 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . APC2 NM_005883 exon12 c.C1518G p.H506Q GCTCCACCAGGTA . 81.0 11.0 109.0 0.0 . 290 APOB 338 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 21231036 21231036 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . APOB NM_000384 exon26 c.A8704T p.S2902C CCTGACTAGAGAA . 107.0 49.0 106.0 0.0 . 175 APOBEC3D 140564 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 39421150 39421150 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . APOBEC3D NM_152426 exon3 c.A286C p.R96R GCTAACAGGCGCT . 77.0 28.0 97.0 0.0 . 180 APOD 347 broad.mit.edu;bcgsc.ca 37 3 195306268 195306268 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . APOD NM_001647 exon2 c.C65A p.A22E TGAAATGCTTGTC . 94.0 31.0 95.0 2.0 . 516 APP 351 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 27277345 27277345 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . APP NM_000484 exon15 c.A1954G p.T652A GTCGAGTGGTCAG . 98.0 34.0 104.0 0.0 . 91 APPL2 55198 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 105605024 105605024 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . APPL2 NM_018171 exon5 c.A357T p.R119R CTTTTCTCGGAAT . 56.0 28.0 84.0 1.0 . 91 AQP10 89872 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 154294415 154294415 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AQP10 NM_080429 exon2 c.A112T p.T38S CTCCTCACCCAAG . 271.0 42.0 128.0 0.0 . 90 AR 367 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 66937427 66937427 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . AR NM_000044 exon5 c.A2281C p.R761R AACTCCAGGATGC . 58.0 52.0 58.0 0.0 . 661 ARHGAP22 58504 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 49687696 49687696 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ARHGAP22 NM_001256025 exon4 c.G452T p.W151L GGGGCCCAGATGA . 117.0 56.0 119.0 0.0 . 228 ARHGAP24 83478 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 86916311 86916311 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ARHGAP24 NM_001025616 exon9 c.A1504T p.S502C AACATGAGCTGGC . 58.0 21.0 76.0 1.0 . 227 ARHGAP31 57514 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 119133814 119133814 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ARHGAP31 NM_020754 exon12 c.T3038A p.L1013Q CTGGCCTGAAAGG . 65.0 23.0 65.0 0.0 . 92 ARHGAP33 115703 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 36276186 36276186 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ARHGAP33 NM_052948 exon18 c.A1817T p.K606M CTCGAAAGAAGCC . 92.0 43.0 98.0 0.0 . 229 ARHGAP35 2909 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 19 47425269 47425269 + Nonsense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_004491 exon1 c.C3337T p.Q1113X AGCACCCAAGGCA . 101.0 43.0 154.0 0.0 . . ARHGEF12 23365 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 120349051 120349051 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ARHGEF12 NM_015313 exon37 c.A3719T p.H1240L ATTCACACCTGCC . 60.0 25.0 73.0 0.0 . 661 ARHGEF17 9828 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 73066691 73066691 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ARHGEF17 NM_014786 exon4 c.A3567G p.L1189L GTTCCTAGAGGTA . 53.0 20.0 57.0 0.0 . 227 ARHGEF4 50649 broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 131674130 131674130 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ARHGEF4 . . . . GCAGGGCCGGCAG . 31.0 10.0 47.0 1.0 . 292 ARID1B 57492 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 157528624 157528624 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ARID1B NM_020732 exon20 c.A6349T p.R2117W TTAGTTAGGTACG . 47.0 21.0 56.0 0.0 . 154 ARID5B 84159 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 63760062 63760062 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ARID5B NM_032199 exon4 c.A715G p.S239G AACGAGAGTATAT . 71.0 29.0 91.0 0.0 . 94 ARL13B 200894 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 93754239 93754239 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ARL13B NM_182896 exon4 c.C445G p.L149V CTATCTCTGGAAA . 156.0 67.0 153.0 0.0 . 91 ARMC5 79798 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 31477974 31477974 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ARMC5 NM_001105247 exon6 c.A2572T p.I858F GGCCGCATCCACC . 47.0 20.0 50.0 0.0 . 24 ARMCX1 51309 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 100808409 100808409 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ARMCX1 NM_016608 exon4 c.A496G p.S166G AGGGCAAGTGGAA . 76.0 60.0 95.0 1.0 . 134 ARMCX3 51566 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 X 100880234 100880234 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ARMCX3 NM_016607 exon5 c.A265T p.R89X GGAACCAGAGCTA . 30.0 29.0 37.0 0.0 . 131 ARPC1A 10552 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 98946489 98946489 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ARPC1A NM_006409 exon5 c.A407G p.H136R GCAAGCACATTAA . 158.0 84.0 155.0 0.0 . 91 ARRDC5 645432 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 4902726 4902726 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001080523 exon1 c.C154A p.P52T CTATGGGGTCCAC . 120.0 62.0 139.0 0.0 . . ART4 420 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 14993397 14993397 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ART4 NM_021071 exon2 c.A835G p.N279D GACAGTTATATGT . 49.0 21.0 57.0 0.0 . 90 ASAH2 56624 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 52005188 52005188 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ASAH2 NM_001143974 exon2 c.A154T p.T52S TTTGGGTGGTTGA . 83.0 35.0 105.0 0.0 . 90 ASAP1 50807 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 131130809 131130809 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ASAP1 NM_018482 exon19 c.A1720T p.R574W AATCCCTGGATTT . 87.0 36.0 112.0 0.0 . 95 ASCC3 10973 broad.mit.edu;mdanderson.org 37 6 101173567 101173567 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ASCC3 NM_006828 exon11 c.A1750C p.T584P CTGGTGTGGTCAC . 86.0 11.0 89.0 1.0 . 96 ASH1L 55870 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 155451023 155451023 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ASH1L NM_018489 exon3 c.A1638G p.P546P ACTGAATGGGGAT . 133.0 26.0 54.0 0.0 . 234 ASIC1 41 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 12 50474966 50474966 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001095 exon10 c.1377+2T>A . ACGAGGTAAGCGG . 69.0 33.0 65.0 0.0 . . ASIC1 41 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 50473727 50473727 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001256830 exon6 c.T1196C p.M399T GTGAAATGCCTTG . 123.0 49.0 155.0 0.0 . . ASTL 431705 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 96795631 96795631 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ASTL NM_001002036 exon8 c.C806T p.A269V TCCGAGGCACTCA . 117.0 54.0 130.0 0.0 . 90 ASTN1 460 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 177001594 177001594 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ASTN1 NM_004319 exon3 c.C863T p.P288L CCACCTGGTGTGA . 68.0 23.0 32.0 0.0 . 319 ATG16L2 89849 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 72538273 72538273 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATG16L2 NM_033388 exon14 c.G1407T p.V469V TGACGTGGTGTGT . 68.0 24.0 90.0 0.0 . 90 ATM 472 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 108175446 108175446 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATM NM_000051 exon37 c.T5541C p.H1847H GATTCATGATATT . 47.0 20.0 70.0 0.0 . 3419 ATOH1 474 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 94750985 94750985 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATOH1 NM_005172 exon1 c.C908A p.T303K CCCTGACAGCGAT . 57.0 28.0 38.0 0.0 . 90 ATP13A4 84239 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 193128796 193128796 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATP13A4 NM_032279 exon28 c.T3272C p.I1091T TCTGGTATATCAG . 342.0 148.0 382.0 1.0 . 92 ATP13A4 84239 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 193232491 193232491 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATP13A4 NM_032279 exon2 c.C230A p.T77K ACCGTTGTCCTCA . 72.0 31.0 77.0 0.0 . 92 ATP1A2 477 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 160097597 160097597 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATP1A2 NM_000702 exon8 c.T1004A p.L335Q GGCTTCTGGCCAC . 107.0 77.0 56.0 0.0 . 518 ATP1A3 478 broad.mit.edu;mdanderson.org 37 19 42471493 42471493 + Splice_Site SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATP1A3 NM_001256213 exon23 c.2955-1G>T . CTGGGCCTGCAGA . 21.0 8.0 21.0 0.0 . 92 ATP1A4 480 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 160144010 160144010 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATP1A4 NM_144699 exon14 c.C2101A p.P701T ACCTCCCCTCAGC . 329.0 236.0 196.0 0.0 . 94 ATP2B2 491 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 10370618 10370618 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATP2B2 NM_001001331 exon23 c.A3612T p.S1204S GAGGGATGACGGC . 98.0 46.0 139.0 0.0 . 95 ATP2C1 27032 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 3 130714897 130714897 + Nonsense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATP2C1 NM_001199181 exon22 c.G2170T p.E724X GCAATCGAAGAGG . 23.0 10.0 30.0 0.0 . 91 ATP6V1A 523 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 113524316 113524316 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATP6V1A NM_001690 exon14 c.A1705G p.I569V TGGTCCATTATTC . 176.0 74.0 182.0 0.0 . 93 ATP8A1 10396 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 42446619 42446619 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATP8A1 NM_006095 exon32 c.A2991G p.G997G CTCCAATCCAGCT . 58.0 26.0 95.0 0.0 . 92 ATP8A2 51761 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 13 26349095 26349095 + Nonsense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd ATP8A2,arm,malignant_melanoma,-2 ATP8A2 NM_016529 exon27 c.G2677T p.E893X ATTATTGAGGTAA . 38.0 12.0 49.0 1.0 . 138 ATP8B1 5205 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 55338765 55338765 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATP8B1 NM_005603 exon17 c.A1867C p.T623P TAACAGTGTCAGC . 130.0 54.0 154.0 0.0 . 587 ATR 545 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 142253962 142253962 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATR NM_001184 exon21 c.A3905T p.H1302L AGAGCATGAATAC . 106.0 55.0 99.0 0.0 . 1139 ATR 545 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 142281191 142281191 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATR NM_001184 exon4 c.G1053T p.Q351H GAAATACTGCAGT . 190.0 97.0 224.0 0.0 . 1139 ATRX 546 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 X 76938245 76938245 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ATRX NM_000489 exon9 c.A2503T p.R835X TGGTTCTGGCAGC . 53.0 52.0 54.0 0.0 . 248 B3GALTL 145173 broad.mit.edu;bcgsc.ca;mdanderson.org 37 13 31789221 31789221 + Missense_Mutation SNP A A G rs112402968 TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . B3GALTL NM_194318 exon2 c.A104G p.E35G AGAAAGAGGTCAA . 28.0 15.0 53.0 1.0 A|0.500;G|0.500 92 B3GAT3 26229 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 62384649 62384649 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . B3GAT3 NM_012200 exon3 c.A428T p.Q143L AGCCGCTGGGCTT . 50.0 27.0 57.0 0.0 . 90 B3GNT3 10331 broad.mit.edu;bcgsc.ca 37 19 17919063 17919063 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . B3GNT3 NM_014256 exon2 c.A447T p.T149T GGGCACAGCCTCC . 72.0 31.0 88.0 1.0 . 91 B4GALNT3 283358 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 668524 668524 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . B4GALNT3 NM_173593 exon19 c.G2825C p.G942A GGATTGGGGGCAT . 168.0 72.0 173.0 1.0 . 92 B4GALNT3 283358 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 660161 660161 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . B4GALNT3 NM_173593 exon11 c.T1071C p.D357D GGTGGATGGGCTT . 65.0 29.0 114.0 0.0 . 92 B4GALNT3 283358 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 662644 662644 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . B4GALNT3 NM_173593 exon14 c.A1555G p.S519G AAACCCAGCCCTG . 51.0 23.0 78.0 0.0 . 92 BACH2 60468 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 90661011 90661011 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BACH2 NM_021813 exon7 c.A814T p.R272W GCCCCCTGGCAAG . 44.0 24.0 55.0 0.0 . 231 BAI3 577 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 69949085 69949085 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BAI3 NM_001704 exon20 c.C2781T p.L927L TATCCTCATACTG . 89.0 35.0 98.0 0.0 . 1148 BBS5 129880 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 2 170354147 170354147 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BBS5 NM_152384 exon8 c.A629G p.K210R CAATAAAGATTAG . 262.0 13.0 304.0 0.0 . 90 BBS7 55212 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 122756329 122756329 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BBS7 NM_018190 exon14 c.A1481G p.H494R CTTTGATGGAGTG . 95.0 29.0 140.0 0.0 . 91 BCAN 63827 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 156622305 156622305 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BCAN NM_198427 exon8 c.A1563T p.P521P ATCACCACTTCCT . 125.0 23.0 84.0 0.0 . 516 BCLAF1 9774 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 136599666 136599666 + Missense_Mutation SNP C C T rs147857152 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BCLAF1 NM_014739 exon4 c.G353A p.R118K ACGGATCTTCTTT . 139.0 33.0 129.0 0.0 C|1.000;G|0.000 228 BEND3 57673 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 107390413 107390413 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BEND3 NM_001080450 exon5 c.A1982G p.H661R GGCACGTGGACCT . 46.0 21.0 58.0 0.0 . 71 BFSP2 8419 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 133169265 133169265 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BFSP2 NM_003571 exon4 c.T848C p.V283A GAGATGTTGAAAA . 48.0 19.0 56.0 0.0 . 90 BICC1 80114 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 10 60553242 60553242 + Splice_Site SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BICC1 NM_001080512 exon9 c.1048-2A>G . TTTTCTAGGGTTG . 96.0 33.0 92.0 0.0 . 72 BIRC6 57448 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 32726807 32726807 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BIRC6 NM_016252 exon47 c.A9059C p.H3020P CTAAACATGAAAA . 88.0 28.0 94.0 0.0 . 233 BIRC6 57448 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 32750644 32750644 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BIRC6 NM_016252 exon59 c.A11869C p.N3957H GCTGCCAACAAAA . 112.0 37.0 109.0 0.0 . 233 BIRC7 79444 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 61867542 61867542 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BIRC7 NM_139317 exon1 c.C94A p.P32T TGTGGACCCCGCT . 48.0 44.0 73.0 1.0 . 659 BIRC8 112401 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 53793261 53793261 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BIRC8 NM_033341 exon1 c.T367A p.F123I AATCAAATCCCAT . 93.0 39.0 118.0 0.0 . 227 BLNK 29760 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 97976426 97976426 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BLNK NM_001114094 exon7 c.C590T p.S197L GGAGGTGAACTGC . 68.0 49.0 156.0 0.0 . 92 BMP7 655 broad.mit.edu;mdanderson.org 37 20 55841042 55841042 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BMP7 NM_001719 exon1 c.T137C p.L46P CTGCGGAGGCGCC . 30.0 10.0 30.0 0.0 . 187 BMPER 168667 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 33976943 33976943 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BMPER NM_133468 exon4 c.T262C p.S88P GTGCTGTCCCGAG . 60.0 24.0 106.0 0.0 . 92 BNC2 54796 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 16437127 16437127 + Silent SNP G G T rs183551262 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BNC2 NM_017637 exon6 c.C1065A p.P355P AAGGCTGGGTTCC . 110.0 38.0 110.0 0.0 G|0.999;A|0.000 92 BNIPL 149428 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 151018276 151018276 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BNIPL NM_138278 exon8 c.A855G p.L285L CAGGCTACGGAAA . 153.0 54.0 68.0 0.0 . 227 BPI 671 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 36956045 36956045 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BPI NM_001725 exon11 c.T1229A p.L410H GAGAGCTCAAGCT . 67.0 40.0 64.0 1.0 . 94 BPIFA1 51297 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 31827623 31827623 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_016583 exon4 c.A335G p.D112G TCACTGACCCCCA . 104.0 34.0 104.0 0.0 . . BPIFB2 80341 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 31604907 31604907 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_025227 exon7 c.T576C p.I192I CTTAATTGGTAAG . 39.0 10.0 54.0 0.0 . . BPIFC 254240 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 32828474 32828474 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_174932 exon10 c.G1035T p.E345D GGGAGGCTCTGTG . 99.0 46.0 111.0 0.0 . . BPTF 2186 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 65907751 65907751 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BPTF NM_004459 exon13 c.A4129G p.S1377G TCCAAGAGTGCTT . 122.0 49.0 126.0 0.0 . 94 BRD9 65980 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 878542 878542 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BRD9 NM_023924 exon11 c.A1199T p.D400V TTCAAGTCGCCAA . 59.0 13.0 72.0 0.0 . 90 BRDT 676 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 92442752 92442752 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BRDT NM_001242806 exon6 c.T783C p.S261S AGATTCTCAGCAA . 202.0 78.0 238.0 0.0 . 374 BRIP1 83990 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 17 59793426 59793426 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BRIP1 NM_032043 exon18 c.2380-2A>T . TCAACCTAATAAT . 39.0 16.0 54.0 0.0 . 660 BRWD3 254065 broad.mit.edu;bcgsc.ca;mdanderson.org 37 X 79999579 79999579 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BRWD3 NM_153252 exon8 c.A765G p.A255A AACGGGTGCACAA . 220.0 16.0 260.0 1.0 . 134 BRWD3 254065 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 79979304 79979304 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BRWD3 NM_153252 exon16 c.A1593G p.T531T AGAATCTGTGCAG . 47.0 45.0 52.0 0.0 . 134 BSG 682 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 578005 578005 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BSG NM_001728 exon2 c.A299T p.E100V TCGTGGAGGAGGA . 49.0 10.0 57.0 1.0 . 90 BTBD1 53339 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 83718868 83718868 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BTBD1 NM_025238 exon3 c.A621G p.T207T ATCCATTGTGCTT . 60.0 31.0 79.0 0.0 . 91 BUB1B 701 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 40491906 40491906 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BUB1B NM_001211 exon10 c.A1379T p.Q460L CTACTCAGCAAGA . 285.0 122.0 320.0 0.0 . 1509 BVES 11149 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 105572512 105572512 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . BVES NM_001199563 exon5 c.A558T p.R186R ATGTCCTCGATAG . 30.0 10.0 45.0 0.0 . 90 C10orf107 219621 broad.mit.edu;ucsc.edu;bcgsc.ca 37 10 63441009 63441009 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C10orf107 NM_173554 exon2 c.C9A p.F3L GGATTTCTCTATT . 47.0 6.0 54.0 0.0 . 90 C10orf71 118461 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 10 50532101 50532101 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C10orf71 NM_001135196 exon3 c.A1511T p.K504M ACCTCAAGGACGT . 58.0 32.0 85.0 0.0 . 90 C10orf71 118461 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 50530956 50530956 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C10orf71 NM_001135196 exon3 c.C366T p.V122V GCCAGTCCAGAGG . 127.0 62.0 128.0 0.0 . 90 C11orf65 160140 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 108253873 108253873 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C11orf65 NM_152587 exon9 c.A817C p.I273L TATATATGTTTTT . 64.0 23.0 78.0 0.0 . 91 C14orf105 55195 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 57960276 57960276 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C14orf105 NM_018168 exon1 c.A158G p.Q53R TTATTCTGGTCCT . 47.0 20.0 43.0 0.0 . 90 C15orf39 56905 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 75499850 75499850 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C15orf39 NM_015492 exon2 c.A1461T p.P487P TCTTCCACAGAAG . 43.0 18.0 66.0 0.0 . 90 C16orf54 283897 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 29755668 29755668 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_175900 exon2 c.A605T p.Q202L CGTGGCTGGAGGC . 99.0 52.0 93.0 0.0 . . C16orf89 146556 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 5112500 5112500 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C16orf89 NM_001098514 exon2 c.T284A p.L95Q TCCCCCAGCATCC . 60.0 30.0 61.0 0.0 . 92 C17orf104 284071 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 17 42750732 42750732 + Splice_Site SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C17orf104 NM_001145080 exon7 c.2458-2A>C . TCCCTCAGGTTGT . 63.0 24.0 49.0 0.0 . 22 C18orf8 29919 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 21104400 21104400 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C18orf8 NM_013326 exon12 c.A1014G p.S338S TTCTTCATCTTGG . 55.0 21.0 64.0 0.0 . 91 C19orf21 126353 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 757065 757065 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C19orf21 NM_173481 exon2 c.C119T p.A40V CCGAGGCCAGCGG . 72.0 38.0 77.0 1.0 . 91 C19orf21 126353 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 758002 758002 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C19orf21 NM_173481 exon2 c.G1056T p.Q352H CGTGCAGCGGGAC . 13.0 6.0 22.0 0.0 . 91 C19orf21 126353 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 758534 758534 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C19orf21 NM_173481 exon2 c.G1588T p.V530L TGGGAGGTGGCTG . 77.0 33.0 86.0 0.0 . 91 C19orf21 126353 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 758601 758601 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C19orf21 NM_173481 exon2 c.A1655T p.E552V AGAGGGAGAGTGT . 129.0 58.0 153.0 0.0 . 91 C1orf106 55765 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 200877954 200877954 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C1orf106 NM_018265 exon7 c.C968T p.P323L CAGGACCTGAGGC . 157.0 13.0 291.0 0.0 . 93 C1orf173 127254 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 75065565 75065565 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C1orf173 NM_001002912 exon11 c.A1540G p.N514D CTTCATTAGATTT . 110.0 54.0 123.0 0.0 . 94 C1orf94 84970 broad.mit.edu;ucsc.edu;mdanderson.org 37 1 34662932 34662932 + Nonsense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C1orf94 NM_001134734 exon2 c.G427T p.E143X TCTGGGGAGCTGG . 72.0 31.0 108.0 1.0 . 90 C1QTNF7 114905 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 15444181 15444181 + Missense_Mutation SNP C C A rs140339349 byfrequency TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C1QTNF7 NM_001135170 exon3 c.C649A p.L217M ATCGGACTGGTAC . 72.0 21.0 93.0 0.0 C|1.000;A|0.000 90 C20orf141 128653 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 2796253 2796253 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C20orf141 NM_080739 exon2 c.T330A p.G110G TGAAGGTCCTGGA . 77.0 30.0 87.0 0.0 . 90 C21orf58 54058 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 47735441 47735441 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C21orf58 NM_058180 exon4 c.G391A p.D131N GGGCATCGTCCGG . 35.0 28.0 77.0 0.0 . 91 C2CD5 9847 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 22606848 22606848 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_014802 exon24 c.G2853A p.E951E TGGATTCTCCATG . 92.0 40.0 124.0 0.0 . . C2orf71 388939 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 29296302 29296302 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C2orf71 NM_001029883 exon1 c.A826T p.S276C GCTTGCTGACTGT . 53.0 22.0 60.0 0.0 . 91 C2orf80 389073 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 209047758 209047758 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C2orf80 NM_001099334 exon4 c.T137C p.L46S ATGGCCAAGTCAT . 77.0 33.0 103.0 0.0 . 69 C3 718 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 6710810 6710810 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C3 NM_000064 exon13 c.A1526G p.E509G CCGGGCTCTCGCA . 100.0 44.0 85.0 0.0 . 95 C3orf20 84077 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 14813588 14813588 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C3orf20 NM_032137 exon16 c.T2510C p.V837A ACTCTGTCCTGAG . 66.0 27.0 63.0 0.0 . 94 C3P1 388503 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 10169609 10169609 + RNA SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C3P1 . . . . CAAGCCAACGACT . 105.0 47.0 90.0 0.0 . 90 C4orf26 152816 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 4 76489571 76489571 + Nonsense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C4orf26 NM_178497 exon2 c.T315G p.Y105X ATTTTATTGGCCA . 206.0 77.0 280.0 0.0 . 90 C6 729 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 41143008 41143008 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C6 NM_001115131 exon18 c.A2724T p.T908T GTTCAATGTTTTC . 82.0 34.0 89.0 0.0 . 95 C6orf165 154313 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 88128124 88128124 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C6orf165 NM_001031743 exon7 c.A830T p.Q277L TCCTTCAGATCAT . 61.0 28.0 71.0 0.0 . 90 C6orf170 221322 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 121563461 121563461 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C6orf170 NM_152730 exon18 c.A2043T p.L681F ATCATCTAACAAA . 63.0 29.0 59.0 1.0 . 92 C6orf170 221322 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 121447529 121447529 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C6orf170 NM_152730 exon26 c.A2978G p.Y993C CCTGTATACTCCA . 48.0 27.0 62.0 0.0 . 92 C7orf63 79846 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 89917620 89917620 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C7orf63 NM_001039706 exon15 c.G1729T p.G577C CAGAGTGGCTTAG . 94.0 34.0 116.0 0.0 . 91 C7orf63 79846 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 89936396 89936396 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C7orf63 NM_001039706 exon20 c.A2447G p.Q816R ATGAACAAAAAGT . 135.0 54.0 133.0 0.0 . 91 C8orf4 56892 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 40011185 40011185 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C8orf4 NM_020130 exon1 c.A134C p.Q45P CAGACCAAGAATC . 70.0 39.0 102.0 0.0 . 69 C9orf153 389766 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 88842778 88842778 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C9orf153 NM_001276368 exon4 c.T234A p.P78P GATAACAGGTTGG . 99.0 43.0 97.0 0.0 . 90 C9orf3 84909 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 97522798 97522798 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C9orf3 NM_001193331 exon2 c.A733T p.R245W GCTATCAGGATAT . 60.0 22.0 54.0 0.0 . 91 C9orf96 169436 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 136270407 136270407 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . C9orf96 NM_153710 exon18 c.T1905C p.S635S CAGTAGTATGAAG . 12.0 10.0 23.0 0.0 . 334 CA12 771 broad.mit.edu;mdanderson.org 37 15 63673907 63673907 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CA12 NM_206925 exon1 c.A13C p.S5R GCAGGCTGCGCCG . 30.0 8.0 33.0 1.0 . 515 CA9 768 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 35674105 35674105 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CA9 NM_001216 exon1 c.G149T p.G50V CCTTGGGAGGAGG . 75.0 38.0 58.0 0.0 . 95 CAB39 51719 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 231655654 231655654 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CAB39 NM_001130849 exon3 c.A182T p.E61V AAAAAGAGCCTCA . 152.0 60.0 178.0 0.0 . 226 CABLES1 91768 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 20774494 20774494 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CABLES1 NM_001100619 exon3 c.A1000G p.R334G GATACCAGGAATG . 53.0 29.0 62.0 0.0 . 522 CABP1 9478 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 121098923 121098923 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CABP1 NM_001033677 exon5 c.C989A p.A330D GAGAGGCTATGAG . 96.0 31.0 107.0 1.0 . 90 CACHD1 57685 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 65142576 65142576 + Splice_Site SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CACHD1 NM_020925 exon22 c.2823-2A>G . CTGCACAGAAACC . 202.0 90.0 197.0 0.0 . 92 CACNA1A 773 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 13411364 13411364 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CACNA1A NM_001127221 exon18 c.T2282A p.V761E ACTTACACAGCTA . 74.0 23.0 87.0 0.0 . 67 CACNA1E 777 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 181680158 181680158 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CACNA1E NM_001205293 exon8 c.A1124T p.Q375L AGCAGCAGATTGA . 75.0 29.0 43.0 0.0 . 95 CACNA1E 777 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 181767600 181767600 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CACNA1E NM_001205293 exon48 c.A6572T p.E2191V GCGAGGAGGGCTC . 82.0 22.0 54.0 0.0 . 95 CACNA1H 8912 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 1270071 1270071 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CACNA1H NM_021098 exon35 c.A6139G p.R2047G CCGGTGAGGCCGG . 84.0 39.0 109.0 0.0 . 67 CACNA2D4 93589 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 2027475 2027475 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CACNA2D4 NM_172364 exon1 c.G165T p.W55C CAGCAGCCACAGG . 47.0 20.0 71.0 0.0 . 23 CACNA2D4 93589 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 1987485 1987485 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CACNA2D4 NM_172364 exon16 c.C1715G p.P572R ACCAGGGGCCGGA . 61.0 31.0 82.0 0.0 . 23 CACNG3 10368 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 24373102 24373102 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CACNG3 NM_006539 exon4 c.T866A p.L289Q CTTTTCTACAGTT . 94.0 40.0 96.0 0.0 . 90 CACNG7 59284 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 54444786 54444786 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CACNG7 NM_031896 exon4 c.A487C p.R163R ATGAACAGGCCCA . 55.0 30.0 67.0 0.0 . 91 CADM1 23705 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 115080321 115080321 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CADM1 NM_014333 exon8 c.A1051G p.T351A TGGTGGTGGTGGT . 56.0 33.0 53.0 0.0 . 92 CADM2 253559 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 85961527 85961527 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CADM2 NM_001167675 exon6 c.A534T p.V178V AGATGTAAAATAT . 254.0 118.0 224.0 0.0 . 228 CADPS 8618 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 62631427 62631427 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CADPS NM_003716 exon6 c.A1295G p.Q432R TCAGTCTGTAGTT . 86.0 31.0 102.0 0.0 . 281 CALD1 800 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 134613624 134613624 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CALD1 NM_033157 exon4 c.A191T p.D64V TGACCGACCAGGT . 85.0 40.0 95.0 0.0 . 226 CALHM3 119395 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 105236257 105236257 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CALHM3 NM_001129742 exon2 c.T337A p.W113R GGATCCAGACCAG . 56.0 39.0 140.0 0.0 . 67 CAMK2A 815 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 5 149602599 149602599 + Nonsense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CAMK2A NM_015981 exon18 c.G1419A p.W473X GATCTGCCATTTG . 39.0 20.0 61.0 0.0 . 333 CAND1 55832 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 12 67703830 67703830 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CAND1 NM_018448 exon12 c.A3175T p.R1059X AAAGTTAGAAAGG . 112.0 44.0 121.0 0.0 . 516 CAND2 23066 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 12848860 12848860 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CAND2 NM_001162499 exon3 c.A268C p.T90P GTGGACACCCTGT . 147.0 66.0 160.0 2.0 . 72 CAPN13 92291 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 30966296 30966296 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CAPN13 NM_144575 exon13 c.A1398T p.S466S CTCCGCTGATTTT . 104.0 44.0 132.0 0.0 . 136 CAPN8 388743 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 223717520 223717520 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . . GGTCTGCTGCACC . 17.0 16.0 41.0 0.0 . . CAPS2 84698 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 75692738 75692738 + Missense_Mutation SNP C C T rs200022333 TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CAPS2 NM_032606 exon11 c.G920A p.R307H GCATCACGTCCAT . 71.0 27.0 91.0 0.0 C|0.999;T|0.000 92 CAPS2 84698 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 75716791 75716791 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CAPS2 NM_032606 exon5 c.G311T p.C104F GTTTGACATGGTG . 278.0 95.0 282.0 0.0 . 92 CAPS2 84698 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 75720286 75720286 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CAPS2 NM_032606 exon2 c.G50C p.G17A TGAGTTCCTGTGT . 53.0 14.0 69.0 0.0 . 92 CARD11 84433 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 2987406 2987406 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CARD11 NM_032415 exon3 c.T23G p.M8R TCATCCATCTCTG . 103.0 45.0 102.0 0.0 . 870 CARD11 84433 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 7 2983944 2983944 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CARD11 NM_032415 exon5 c.A586T p.K196X TCACCTTGACCAG . 99.0 45.0 127.0 0.0 . 870 CASQ2 845 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 116244009 116244009 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CASQ2 NM_001232 exon11 c.T1053A p.D351E TGGAAGATCGTCA . 97.0 39.0 105.0 0.0 . 91 CCBE1 147372 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 18 57122130 57122130 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCBE1 NM_133459 exon6 c.A607T p.K203X ACTCCTTGCATGT . 64.0 27.0 76.0 0.0 . 93 CCDC102B 79839 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 66678301 66678301 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC102B NM_001093729 exon9 c.T1394C p.V465A TACGAGTGGAAGA . 135.0 50.0 159.0 0.0 . 93 CCDC103 388389 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 42979908 42979908 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC103 NM_001258395 exon4 c.T452A p.L151Q TGGCACTGGCTGA . 58.0 23.0 82.0 1.0 . 69 CCDC113 29070 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 58293762 58293762 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC113 NM_014157 exon5 c.A551T p.N184I AGGATAATATGAA . 89.0 81.0 190.0 0.0 . 90 CCDC13 152206 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 42775068 42775068 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC13 NM_144719 exon11 c.A1405T p.S469C GGCCACTGGACCC . 31.0 15.0 29.0 0.0 . 91 CCDC136 64753 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 128449649 128449649 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC136 NM_022742 exon11 c.A1751T p.E584V AGGAAGAGCTGCA . 118.0 60.0 149.0 0.0 . 24 CCDC140 151278 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 223168828 223168828 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC140 NM_153038 exon2 c.A207T p.P69P GGGGCCAAGCCCG . 231.0 116.0 281.0 0.0 . 68 CCDC166 100130274 broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 144789934 144789934 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001162914 exon1 c.T346G p.Y116D CGTGGTAGAGCGA . 12.0 9.0 17.0 0.0 . . CCDC168 643677 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 103383046 103383046 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001146197 exon4 c.T20001C p.I6667I TGTATCAATGGAA . 60.0 55.0 79.0 0.0 . . CCDC168 643677 hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 13 103392604 103392604 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001146197 exon4 c.T10443C p.H3481H AGTTTTATGGTAT . 54.0 29.0 49.0 0.0 . . CCDC174 51244 ucsc.edu;bcgsc.ca;mdanderson.org 37 3 14711539 14711539 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_016474 exon10 c.A1051T p.R351W CAGGAGAGGAAGG . 258.0 124.0 286.0 2.0 . . CCDC176 80127 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 74514721 74514721 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_025057 exon7 c.C736T p.L246L GACGCTCTACAAA . 165.0 38.0 246.0 1.0 . . CCDC176 80127 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 14 74514746 74514757 + In_Frame_Del DEL AAGAGAGTCATA AAGAGAGTCATA - novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 AAGAGAGTCATA AAGAGAGTCATA . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_025057 exon7 c.761_772del p.254_258del AGTTGCAAGAGAG . 156.0 24.0 231.0 0.0 . . CCDC178 374864 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 30672732 30672732 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001105528 exon20 c.A2381T p.K794M TGTTTCTTATCTC . 200.0 104.0 254.0 0.0 . . CCDC27 148870 broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 3683112 3683112 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC27 NM_152492 exon9 c.G1466A p.R489Q ACCTCCGAGAAGA . 109.0 9.0 122.0 1.0 . 91 CCDC27 148870 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 3680278 3680278 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC27 NM_152492 exon8 c.G1330T p.A444S GTGATTGCGTCTT . 177.0 24.0 278.0 0.0 . 91 CCDC50 152137 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 191078935 191078935 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC50 NM_174908 exon4 c.A317G p.E106G TTCAGGAGAAGAA . 384.0 157.0 442.0 0.0 . 90 CCDC78 124093 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 774367 774367 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC78 NM_001031737 exon9 c.T908A p.L303Q TCCACCAGCCTCT . 41.0 20.0 37.0 0.0 . 91 CCDC80 151887 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 112357721 112357721 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC80 NM_199511 exon2 c.T1032A p.P344P TGAGGGAGGTTGG . 29.0 9.0 45.0 0.0 . 92 CCDC81 60494 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 86103710 86103710 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC81 NM_001156474 exon4 c.A426T p.Q142H GAAACAAAATGTG . 106.0 38.0 130.0 0.0 . 91 CCDC81 60494 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 86108753 86108753 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC81 NM_001156474 exon6 c.A726T p.K242N GTTAAAAGACCAG . 40.0 16.0 45.0 0.0 . 91 CCDC90A 63933 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 13791091 13791091 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC90A NM_001031713 exon9 c.A1030G p.I344V TAAATATAGACCC . 218.0 92.0 190.0 0.0 . 90 CCDC94 55702 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 4249223 4249223 + Splice_Site SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCDC94 NM_018074 exon2 c.25-2A>G . CCCTGCAGAAATA . 72.0 34.0 86.0 0.0 . 90 CCL11 6356 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 32612882 32612882 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCL11 NM_002986 exon1 c.C55A p.P19T TTCAGCCCCCAGG . 43.0 21.0 44.0 0.0 . 90 CCL18 6362 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 17 34398401 34398401 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCL18 NM_002988 exon3 c.A270T p.X90C TGCCTGAGGGGCC . 130.0 72.0 146.0 0.0 . 514 CCL2 6347 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 32583296 32583296 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCL2 NM_002982 exon2 c.A132G p.S44S GATCTCAGTGCAG . 36.0 12.0 49.0 0.0 . 91 CCNE2 9134 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 95906153 95906153 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCNE2 NM_057749 exon4 c.A131T p.E44V ACCTCCTCTCTTC . 118.0 46.0 151.0 0.0 . 414 CCR6 1235 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 167550197 167550197 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCR6 NM_004367 exon3 c.C479A p.T160K CCAGAACACTACC . 58.0 18.0 78.0 0.0 . 227 CCR7 1236 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 38721654 38721654 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCR7 NM_001838 exon1 c.T8A p.L3Q TCACCCAGGTCCA . 58.0 15.0 71.0 0.0 . 659 CCR8 1237 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 39374403 39374403 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CCR8 NM_005201 exon2 c.G581T p.W194L TGAAGTGGAAGAT . 60.0 25.0 63.0 0.0 . 659 CCSER1 401145 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 91549369 91549369 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001145065 exon6 c.A1918G p.R640G ATGAAGAGAGTTC . 117.0 64.0 146.0 0.0 . . CCSER2 54462 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 86259681 86259681 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_018999 exon10 c.G2376A p.G792G CCAGGGGATCCCA . 56.0 24.0 87.0 0.0 . . CD276 80381 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 73994758 73994758 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CD276 NM_025240 exon3 c.A242G p.E81G TTGCTGAGGGCCA . 58.0 28.0 67.0 0.0 . 91 CD38 952 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 15850179 15850179 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CD38 NM_001775 exon8 c.A857T p.Q286L TTCTTCAGTGTGT . 49.0 15.0 63.0 0.0 . 92 CD5L 922 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 157803106 157803106 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CD5L NM_005894 exon5 c.T915G p.V305V GCGGCCAACCCCA . 250.0 174.0 146.0 0.0 . 91 CD5L 922 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 157803162 157803162 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CD5L NM_005894 exon5 c.T859A p.C287S TCCCACAGCCCAG . 227.0 160.0 144.0 0.0 . 91 CD6 923 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 60739381 60739381 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CD6 NM_006725 exon1 c.T44A p.L15H CAGCCCTCTCAGG . 23.0 7.0 39.0 1.0 . 227 CD86 942 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 121828150 121828150 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CD86 NM_175862 exon5 c.T742C p.W248R ATTCCTTGGATTA . 93.0 38.0 106.0 0.0 . 92 CDC14B 8555 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 9 99286009 99286009 + Splice_Site SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CDC14B NM_001077181 exon11 c.836-2A>G . GCCAGCTAGGAAA . 153.0 134.0 188.0 0.0 . 228 CDC40 51362 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 110522886 110522886 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CDC40 NM_015891 exon3 c.A402G p.T134T TGCAACATATGGT . 52.0 26.0 75.0 0.0 . 90 CDC42BPG 55561 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 64601242 64601242 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CDC42BPG NM_017525 exon22 c.A2533T p.R845W CCGGCCTCAGATC . 27.0 11.0 42.0 0.0 . 528 CDH15 1013 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 89246648 89246648 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CDH15 NM_004933 exon3 c.G242C p.S81T TCTACAGCATCCA . 37.0 27.0 84.0 0.0 . 523 CDH20 28316 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 18 59166656 59166656 + Nonsense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CDH20 NM_031891 exon2 c.G484T p.E162X GACAATGAGCCCA . 101.0 54.0 113.0 0.0 . 155 CDH23 64072 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 10 73269837 73269837 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CDH23 NM_001171931 exon4 c.146-2A>T . TACTCCAGGTTCT . 41.0 18.0 59.0 0.0 . 563 CDH26 60437 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 58563998 58563998 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CDH26 NM_177980 exon9 c.A1063G p.I355V CTCATCATTGTCG . 70.0 29.0 64.0 0.0 . 93 CDH5 1003 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 66431975 66431975 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CDH5 NM_001795 exon9 c.A1451T p.Q484L CCTACCAGCCCAA . 51.0 43.0 128.0 0.0 . 525 CDH6 1004 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 31313451 31313451 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CDH6 NM_004932 exon8 c.T1280C p.M427T CAGATATGGACAG . 123.0 43.0 152.0 1.0 . 159 CDK15 65061 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 202672587 202672587 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CDK15 NM_001261435 exon3 c.A280T p.S94C AGGAAGAGCCTCC . 53.0 27.0 54.0 0.0 . 664 CDK5R2 8941 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 2 219825484 219825484 + Frame_Shift_Del DEL C C - novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CDK5R2 NM_003936 exon1 c.942delC p.D314fs CGCCGACCCCCAC . 77.0 32.0 71.0 0.0 . 227 CDKL3 51265 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 133644327 133644327 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CDKL3 NM_001113575 exon8 c.A973T p.R325W CTTTCCTGAGTTC . 47.0 26.0 57.0 0.0 . 389 CDX2 1045 broad.mit.edu;mdanderson.org 37 13 28542995 28542995 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CDX2 NM_001265 exon1 c.C149A p.A50E GCCGCTGCAGCTG . 13.0 7.0 11.0 0.0 . 658 CEACAM6 4680 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 19 42265920 42265920 + Nonsense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CEACAM6 NM_002483 exon4 c.C747G p.Y249X CAATTACCGTCCA . 110.0 44.0 130.0 0.0 . 91 CEBPE 1053 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 14 23587945 23587945 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CEBPE NM_001805 exon1 c.C356A p.A119E TTCACCGCCACAG . 42.0 18.0 39.0 0.0 . 92 CENPF 1063 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 214818921 214818921 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CENPF NM_016343 exon13 c.A6008T p.Q2003L GCATTCAGGTGGC . 73.0 60.0 134.0 0.0 . 567 CENPV 201161 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 16253335 16253335 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CENPV NM_181716 exon2 c.A419G p.Q140R AGGCCCTGGTATT . 132.0 111.0 302.0 1.0 . 90 CEP250 11190 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 34065725 34065725 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CEP250 NM_007186 exon17 c.C1893G p.S631R GTGCAGCAGAATG . 97.0 48.0 118.0 0.0 . 27 CEP290 80184 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 88513944 88513944 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CEP290 NM_025114 exon15 c.A1469G p.E490G TTCAATTCAAGTT . 275.0 119.0 311.0 0.0 . 96 CEP55 55165 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 95259889 95259889 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CEP55 NM_001127182 exon2 c.A81T p.L27F TACATTAGAAAAA . 47.0 38.0 147.0 1.0 . 90 CEP63 80254 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 134265095 134265095 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CEP63 NM_001042383 exon8 c.G894T p.K298N AGTAAAGGCAACT . 424.0 210.0 403.0 0.0 . 493 CER1 9350 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 14722169 14722169 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CER1 NM_005454 exon1 c.A502T p.S168C CCTGGCTGAAGGG . 67.0 31.0 72.0 0.0 . 226 CERKL 375298 hgsc.bcm.edu;broad.mit.edu;ucsc.edu 37 2 182413408 182413408 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CERKL NM_001030311 exon8 c.A1150T p.K384X CTTACTTAAGTTT . 191.0 82.0 226.0 0.0 . 228 CFH 3075 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 196714988 196714988 + Frame_Shift_Del DEL G G - novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CFH NM_000186 exon21 c.3352delG p.G1118fs GACAATGGGGACA . 114.0 87.0 240.0 0.0 . 566 CHD1L 9557 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 146747893 146747893 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CHD1L NM_004284 exon14 c.A1511T p.Q504L GAGCCCAGAAACC . 129.0 102.0 76.0 0.0 . 231 CHEK2 11200 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 29130640 29130640 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CHEK2 NM_145862 exon2 c.A70T p.S24C TAACGCTGCCATG . 94.0 33.0 110.0 0.0 . 1515 CHL1 10752 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 369957 369957 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CHL1 NM_001253388 exon3 c.A305T p.H102L TATCTCACTTTCA . 163.0 85.0 187.0 0.0 . 583 CHPF 79586 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 220406616 220406616 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CHPF NM_024536 exon2 c.A610T p.T204S CCTCGGTGTAGGT . 55.0 25.0 77.0 0.0 . 90 CHRM2 1129 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 136700927 136700927 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CHRM2 NM_001006632 exon3 c.T1315A p.C439S CCTGCCTGCTATG . 148.0 63.0 163.0 0.0 . 94 CIC 23152 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 42793207 42793207 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CIC NM_015125 exon7 c.G1099C p.E367Q GGCGGAGAAGTAG . 31.0 18.0 34.0 0.0 . 591 CILP2 148113 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 19651056 19651056 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CILP2 NM_153221 exon3 c.A207T p.G69G CCCCGGAGGCGAC . 30.0 15.0 27.0 0.0 . 91 CILP2 148113 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 19655120 19655120 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CILP2 NM_153221 exon8 c.G1766T p.G589V CTTCTGGCGCTTT . 56.0 33.0 71.0 0.0 . 91 CKAP2L 150468 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 113518343 113518343 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CKAP2L NM_152515 exon4 c.105-2A>T . AAGGCCTATAAAA . 269.0 114.0 335.0 0.0 . 90 CLASP2 23122 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 33552159 33552159 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CLASP2 NM_015097 exon37 c.A4235G p.D1412G GGGTAGTCTGCAG . 106.0 45.0 126.0 0.0 . 93 CLCA1 1179 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 86961307 86961307 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CLCA1 NM_001285 exon12 c.G2062T p.V688L CGGAGAGTGATAC . 87.0 43.0 95.0 0.0 . 91 CLDN16 10686 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 190120151 190120151 + Missense_Mutation SNP G G T rs104893732 bycluster;alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CLDN16 NM_006580 exon2 c.G350T p.W117L GCCTCTGGTGGGA . 65.0 20.0 83.0 0.0 . 227 CLEC16A 23274 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 11076808 11076808 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CLEC16A NM_015226 exon9 c.A1031T p.E344V TGTCTGAGATGTA . 57.0 25.0 51.0 0.0 . 92 CLEC2B 9976 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 10005916 10005916 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CLEC2B NM_005127 exon5 c.A433T p.R145W TTTTCCTGCAAAT . 59.0 29.0 51.0 0.0 . 90 CLK2 1196 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 155234093 155234093 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CLK2 NM_003993 exon12 c.1144-2A>T . TGGGTCTGGGAAA . 345.0 239.0 175.0 1.0 . 333 CLSTN1 22883 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 9795215 9795215 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CLSTN1 NM_001009566 exon14 c.C1901T p.T634I ATGCAGGTGGCCT . 37.0 15.0 59.0 0.0 . 523 CMTM4 146223 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 66670433 66670433 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CMTM4 NM_178818 exon2 c.C238T p.P80S CACACGGGGAGCA . 34.0 29.0 62.0 0.0 . 227 CNBD1 168975 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 87899824 87899824 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CNBD1 NM_173538 exon2 c.T143A p.I48N GCCACATTAGAGG . 284.0 124.0 346.0 2.0 . 3 CNBD1 168975 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 88365947 88365947 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CNBD1 NM_173538 exon10 c.T1236G p.P412P AGTTCCTTTCACG . 451.0 189.0 516.0 0.0 . 3 CNBP 7555 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 3 128890513 128890513 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CNBP NM_003418 exon2 c.A88T p.R30X GGCTTCTCATTCC . 293.0 141.0 367.0 1.0 . 226 CNGA3 1261 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 98994248 98994248 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CNGA3 NM_001298 exon3 c.G200T p.G67V TCACCGGCCAGGG . 70.0 27.0 80.0 0.0 . 96 CNGB1 1258 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 57935438 57935438 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CNGB1 NM_001297 exon28 c.C2886T p.L962L CTGAAAGAGTGCG . 37.0 32.0 59.0 0.0 . 137 CNR2 1269 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 24201051 24201051 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CNR2 NM_001841 exon2 c.A1057G p.R353G GATCTCTGGAATC . 58.0 22.0 50.0 0.0 . 228 CNTN6 27255 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 1425084 1425084 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CNTN6 NM_014461 exon19 c.G2509T p.G837C GTGCTGGGCTATG . 42.0 24.0 52.0 0.0 . 345 CNTNAP4 85445 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 76523604 76523604 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CNTNAP4 NM_138994 exon12 c.A1685T p.Q562L TCATACAGCACAA . 49.0 40.0 119.0 0.0 . 70 CNTNAP5 129684 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 125175023 125175023 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CNTNAP5 NM_130773 exon4 c.T385A p.F129I CAGACCTTTGCAG . 65.0 35.0 94.0 0.0 . 524 COBL 23242 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 51095619 51095619 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COBL NM_015198 exon10 c.A3174C p.T1058T GCTTTCTGTGCCA . 138.0 66.0 174.0 0.0 . 95 COL11A1 1301 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 103461545 103461545 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL11A1 NM_080629 exon27 c.G2331A p.K777K CGTTACCTTTACT . 153.0 64.0 181.0 0.0 . 586 COL11A1 1301 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 103484377 103484377 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL11A1 NM_080629 exon10 c.T1383A p.P461P TACTGCAGGTCCT . 506.0 252.0 547.0 1.0 . 586 COL11A2 1302 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 33143844 33143844 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL11A2 NM_080680 exon29 c.T2217C p.G739G ATCCTCACCCTGA . 91.0 25.0 93.0 1.0 . 95 COL16A1 1307 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 32124125 32124125 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL16A1 NM_001856 exon64 c.A3984C p.P1328P CTGGCCTGGGAGG . 50.0 23.0 73.0 1.0 . 98 COL16A1 1307 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 32161363 32161363 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL16A1 NM_001856 exon10 c.A944T p.E315V CTTACCTCATCGG . 86.0 38.0 130.0 0.0 . 98 COL17A1 1308 broad.mit.edu;bcgsc.ca 37 10 105794488 105794488 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL17A1 NM_000494 exon51 c.T3657A p.P1219P ACCAGGAGGTCCT . 99.0 7.0 199.0 0.0 . 95 COL21A1 81578 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 55940292 55940292 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL21A1 NM_030820 exon19 c.A1896G p.G632G TGGGGCTCCTTTT . 138.0 55.0 183.0 1.0 . 24 COL28A1 340267 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 7530242 7530242 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL28A1 NM_001037763 exon12 c.A1062T p.P354P AGCTCCTGGAGAA . 87.0 39.0 62.0 0.0 . 93 COL3A1 1281 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 189864285 189864285 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL3A1 NM_000090 exon31 c.T2211A p.P737P AAGTCCTGGTCCA . 48.0 25.0 43.0 0.0 . 581 COL4A4 1286 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 227875174 227875174 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL4A4 NM_000092 exon46 c.C4377A p.G1459G TCCAGGGCCAAAC . 135.0 64.0 144.0 0.0 . 142 COL4A5 1287 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 107821343 107821343 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL4A5 NM_000495 exon12 c.T681A p.G227G CAAAGGTGAAAAA . 159.0 145.0 192.0 0.0 . 133 COL6A2 1292 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 47552138 47552138 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL6A2 NM_001849 exon28 c.T2732A p.L911Q AATACCTGAACTC . 23.0 21.0 41.0 0.0 . 515 COL6A3 1293 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 2 238303641 238303641 + Frame_Shift_Del DEL G G - novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL6A3 NM_004369 exon3 c.298delC p.Q100fs CTTCTTGTTTAGT . 132.0 63.0 159.0 0.0 . 526 COL6A3 1293 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 238275483 238275483 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL6A3 NM_004369 exon11 c.T5347A p.S1783T CCTCCGAGTCGAT . 129.0 53.0 199.0 0.0 . 526 COL6A5 256076 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 130092493 130092493 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_153264 exon2 c.G12A p.L4L GATCTTGCTAATT . 388.0 150.0 456.0 0.0 . . COL6A6 131873 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 130281939 130281939 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL6A6 NM_001102608 exon2 c.T92C p.L31S TGTTTTTGGTGGA . 87.0 46.0 104.0 0.0 . 76 COL6A6 131873 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 130284329 130284329 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL6A6 NM_001102608 exon3 c.C1153A p.Q385K GCTGAGCAGTATG . 101.0 46.0 117.0 0.0 . 76 COL9A1 1297 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 70935655 70935655 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL9A1 NM_001851 exon37 c.C2561A p.P854H GCTCCAGGCAAAC . 66.0 36.0 83.0 0.0 . 94 COL9A2 1298 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 40769263 40769263 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL9A2 NM_001852 exon28 c.G1487A p.G496D CGAGGGCCGGGGG . 41.0 20.0 36.0 0.0 . 92 COL9A2 1298 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 40777173 40777173 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL9A2 NM_001852 exon10 c.T518C p.L173P CTCACCAGGAAAT . 46.0 20.0 65.0 0.0 . 92 COL9A2 1298 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 40777786 40777786 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COL9A2 NM_001852 exon9 c.364-2A>T . GGCCCCTGGGGAG . 63.0 22.0 88.0 0.0 . 92 CORO2B 10391 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 69006317 69006317 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CORO2B NM_006091 exon6 c.G702T p.M234I GAACATGAAGCGG . 61.0 20.0 94.0 0.0 . 158 COX6A1 1337 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 120875944 120875944 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . COX6A1 NM_004373 exon1 c.T15C p.G5G AGTTGGTGTGTCC . 37.0 20.0 58.0 0.0 . 90 CPB1 1360 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 148558665 148558665 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CPB1 NM_001871 exon5 c.A377T p.E126V AGATAGAGGCTTG . 83.0 40.0 78.0 0.0 . 92 CPVL 54504 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 7 29103852 29103852 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CPVL NM_019029 exon12 c.964-2A>T . GGTTCCTGGCAGA . 72.0 30.0 65.0 0.0 . 92 CR1 1378 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 207741308 207741308 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CR1 NM_000651 exon25 c.A4092G p.G1364G CATTGGAGAGAGC . 143.0 108.0 257.0 0.0 . 93 CREB3L1 90993 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 46334468 46334468 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CREB3L1 NM_052854 exon8 c.C1029A p.N343K TGCCAACAGGTGG . 38.0 14.0 39.0 0.0 . 92 CRHR2 1395 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 30739585 30739585 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CRHR2 NM_001202475 exon1 c.G65A p.C22Y AGGAGGCAGAGCA . 39.0 17.0 63.0 0.0 . 524 CRYBA4 1413 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 27026355 27026355 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CRYBA4 NM_001886 exon6 c.A495T p.E165D GCTGGAATGCGAT . 45.0 15.0 53.0 0.0 . 90 CRYBB1 1414 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 26995533 26995533 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CRYBB1 NM_001887 exon6 c.A680T p.Q227L AGGGACTGCATCT . 97.0 40.0 112.0 0.0 . 91 CSDE1 7812 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 115275369 115275369 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CSDE1 NM_001242891 exon11 c.A1044T p.K348N CGTATCTTTGTCT . 220.0 106.0 237.0 0.0 . 227 CSE1L 1434 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 47675054 47675054 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CSE1L NM_001256135 exon2 c.A54G p.T18T GAAAACACTTGAT . 52.0 29.0 68.0 0.0 . 290 CSMD1 64478 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 8 2964161 2964161 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CSMD1 NM_033225 exon46 c.G6838T p.D2280Y CAAAATCTCCTAG . 49.0 38.0 121.0 0.0 . 86 CSMD1 64478 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 2823327 2823327 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CSMD1 NM_033225 exon59 c.A9250T p.R3084W TCCACCTGCCGTC . 61.0 43.0 134.0 0.0 . 86 CSMD1 64478 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 2944651 2944651 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CSMD1 NM_033225 exon49 c.A7442T p.Y2481F CACTGGTACATGC . 17.0 14.0 64.0 0.0 . 86 CSMD1 64478 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 3216815 3216815 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CSMD1 NM_033225 exon21 c.C3163A p.R1055R TTCTTCGGCTGAA . 59.0 48.0 110.0 0.0 . 86 CSMD2 114784 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 34190207 34190207 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CSMD2 NM_052896 exon18 c.A2674T p.S892C CACAGCTGAAGGT . 109.0 41.0 139.0 1.0 . 103 CSMD2 114784 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 34123600 34123600 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CSMD2 NM_052896 exon27 c.T4273A p.C1425S TCACACAGCTGAT . 52.0 26.0 81.0 0.0 . 103 CSMD2 114784 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 1 34128580 34128580 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CSMD2 NM_052896 exon26 c.A4045T p.K1349X GGTCCTTGGGCAG . 96.0 56.0 136.0 0.0 . 103 CSMD3 114788 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 113237150 113237150 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CSMD3 NM_198123 exon71 c.T10974A p.P3658P TGTTTTAGGTGCA . 102.0 32.0 105.0 0.0 . 1132 CSMD3 114788 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 113702110 113702110 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CSMD3 NM_198123 exon14 c.A2142T p.I714I GATGGGTATGTTT . 89.0 43.0 99.0 0.0 . 1132 CSN3 1448 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 71113535 71113535 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CSN3 NM_005212 exon3 c.G55T p.A19S CCCCAGGCTGTGG . 278.0 85.0 318.0 0.0 . 93 CST9 128822 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 23586297 23586297 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CST9 NM_001008693 exon1 c.A205C p.R69R ACAGCCTGTAGGC . 121.0 56.0 107.0 0.0 . 91 CTNND2 1501 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 11098804 11098804 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CTNND2 NM_001332 exon15 c.G2520T p.M840I CCACAGCATCTGG . 63.0 28.0 71.0 0.0 . 293 CTNND2 1501 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 11117662 11117662 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CTNND2 NM_001332 exon13 c.G2177T p.G726V TCCTCTCCGGCCG . 78.0 29.0 122.0 0.0 . 293 CTSC 1075 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 88042455 88042455 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CTSC NM_001814 exon4 c.A517T p.N173Y CAAAGTTGTGATC . 55.0 23.0 73.0 0.0 . 90 CUBN 8029 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 17151661 17151661 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CUBN NM_001081 exon10 c.T1089A p.D363E TGAGGCATCTGGG . 76.0 27.0 67.0 0.0 . 166 CUL9 23113 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 43155009 43155009 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CUL9 NM_015089 exon6 c.T1413A p.P471P GAATCCTATGGAT . 86.0 35.0 72.0 0.0 . 529 CXCL1 2919 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 74735406 74735406 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CXCL1 NM_001511 exon2 c.C121A p.L41M ACTGAACTGCGCT . 134.0 54.0 153.0 0.0 . 204 CXCL17 284340 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 42937971 42937971 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CXCL17 NM_198477 exon2 c.T117C p.S39S TCTCCTAGAAGCC . 31.0 18.0 46.0 0.0 . 68 CYBASC3 220002 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 61124109 61124109 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CYBASC3 NM_001161454 exon4 c.A128T p.Y43F ATCCAGTAGATAG . 87.0 44.0 89.0 0.0 . 90 CYLC2 1539 broad.mit.edu;bcgsc.ca 37 9 105767509 105767509 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CYLC2 NM_001340 exon5 c.G596A p.G199D ACAAAGGCAAAGA . 93.0 6.0 180.0 0.0 . 91 CYLC2 1539 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 9 105767380 105767380 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CYLC2 NM_001340 exon5 c.A467C p.D156A AGCTAGATGCAAA . 71.0 9.0 134.0 0.0 . 91 CYLC2 1539 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 105767379 105767379 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CYLC2 NM_001340 exon5 c.G466T p.D156Y AAGCTAGATGCAA . 71.0 59.0 135.0 0.0 . 91 CYP1A1 1543 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 75013936 75013936 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CYP1A1 NM_000499 exon3 c.A948G p.G316G ACCAGCTCCAAAG . 62.0 26.0 80.0 0.0 . 156 CYP21A2 1589 broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 32007351 32007351 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . CYP21A2 . . . . ATTACAAATGTAT . 613.0 159.0 557.0 0.0 . 68 DAB2IP 153090 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 124522473 124522473 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DAB2IP NM_032552 exon6 c.A841C p.K281Q GTGGAGAAGTGGT . 27.0 22.0 60.0 0.0 . 91 DACH2 117154 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 85769362 85769362 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DACH2 NM_053281 exon3 c.G608T p.G203V TCCCAGGCCTCTT . 197.0 176.0 224.0 0.0 . 136 DAO 1610 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 109286766 109286766 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DAO NM_001917 exon6 c.A461T p.E154V TAACTGAGAGGGG . 53.0 21.0 68.0 0.0 . 92 DAW1 164781 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 228762991 228762991 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_178821 exon6 c.A534T p.A178A TACAGCAGAAATA . 384.0 143.0 451.0 0.0 . . DCAF11 80344 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 24586232 24586232 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_025230 exon3 c.G262T p.G88W CGTCTTGGGGATC . 147.0 69.0 186.0 0.0 . . DCHS1 8642 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 6644033 6644033 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DCHS1 NM_003737 exon21 c.A8874T p.L2958L AAGTCCTAGGACC . 29.0 25.0 72.0 0.0 . 73 DCHS1 8642 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 6653396 6653396 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DCHS1 NM_003737 exon6 c.A3347T p.E1116V TGGTTCTCAGCCA . 30.0 29.0 58.0 0.0 . 73 DDB1 1642 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 11 61091480 61091480 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DDB1 NM_001923 exon7 c.A892T p.K298X GATCCTTGAGAGT . 170.0 75.0 169.0 0.0 . 661 DDHD1 80821 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 53521180 53521180 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DDHD1 NM_001160147 exon12 c.A2434T p.S812C CAGAACTGCTATG . 134.0 65.0 218.0 0.0 . 92 DDHD1 80821 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 53521253 53521253 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DDHD1 NM_001160147 exon12 c.A2361G p.S787S TTCCATTGAGTCT . 178.0 78.0 222.0 0.0 . 92 DDRGK1 65992 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 20 3180750 3180750 + Splice_Site SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DDRGK1 NM_023935 exon5 c.409-2A>C . TCTGCCTGGAGAG . 71.0 29.0 62.0 0.0 . 90 DDX20 11218 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 112305597 112305597 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DDX20 NM_007204 exon10 c.A1280G p.Q427R TTGCCCAGAAATG . 74.0 9.0 68.0 0.0 . 227 DDX46 9879 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 134109540 134109540 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DDX46 NM_014829 exon5 c.A602G p.E201G GTTTAGAGGACGA . 116.0 69.0 175.0 0.0 . 227 DDX50 79009 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 70666604 70666604 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DDX50 NM_024045 exon2 c.A225G p.E75E CACTGAAGAAGGA . 212.0 81.0 231.0 0.0 . 91 DDX50 79009 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 70670895 70670895 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DDX50 NM_024045 exon4 c.A532T p.I178L GATTTAATAGCTC . 190.0 104.0 195.0 1.0 . 91 DDX53 168400 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 23019627 23019627 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DDX53 NM_182699 exon1 c.A1453G p.S485G TTGTCAAGCGACT . 80.0 74.0 115.0 0.0 . 228 DDX60L 91351 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 169299546 169299546 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DDX60L NM_001012967 exon33 c.G4444T p.A1482S ATTTTGCTGGAAT . 253.0 87.0 331.0 1.0 . 69 DEF8 54849 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 90021593 90021593 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DEF8 NM_207514 exon4 c.G324A p.L108L TGAGCTGCCCCCT . 13.0 11.0 30.0 0.0 . 68 DEFB113 245927 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 49937307 49937307 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DEFB113 NM_001037729 exon1 c.T32C p.V11A GTGAAGACAAAGG . 72.0 31.0 84.0 0.0 . 90 DENND1C 79958 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 6478804 6478804 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DENND1C NM_024898 exon6 c.C356T p.A119V TCCTGGGCTAGGA . 119.0 51.0 179.0 0.0 . 67 DENND3 22898 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 142185462 142185462 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DENND3 NM_014957 exon14 c.A2199T p.L733L AAACCTAGGCGTT . 76.0 32.0 102.0 0.0 . 91 DENND3 22898 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 142188201 142188201 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DENND3 NM_014957 exon16 c.C2502A p.V834V CAACGTCTTGCTG . 38.0 25.0 51.0 0.0 . 91 DES 1674 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 220285630 220285630 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DES NM_001927 exon5 c.C978A p.H326Q CCGACACCAGATC . 61.0 26.0 68.0 0.0 . 514 DGKI 9162 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 137170144 137170144 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DGKI NM_004717 exon24 c.T2403A p.S801S GGAGCCAGAAGAA . 190.0 97.0 237.0 0.0 . 228 DHRS7C 201140 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 9674809 9674809 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001220493 exon6 c.G935T p.G312V AGTTACCCCTCCT . 27.0 17.0 42.0 0.0 . . DIAPH3 81624 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 60490362 60490362 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DIAPH3 NM_001042517 exon19 c.G2192C p.R731P GGCACCCGAAAAG . 66.0 32.0 81.0 0.0 . 516 DIP2C 22982 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 395294 395294 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DIP2C NM_014974 exon25 c.A3086T p.H1029L GCCACGTGGTCGC . 33.0 16.0 29.0 0.0 . 156 DIS3L2 129563 broad.mit.edu;bcgsc.ca 37 2 232894749 232894749 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DIS3L2 NM_001257282 exon5 c.G325T p.D109Y AATGGGGATCTGG . 131.0 7.0 143.0 0.0 . 136 DIS3L2 129563 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 232889007 232889007 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DIS3L2 NM_001257282 exon4 c.A231T p.P77P TAATCCAAAGAAG . 389.0 164.0 473.0 0.0 . 136 DIS3L2 129563 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 233001416 233001416 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DIS3L2 NM_152383 exon8 c.A937G p.N313D GACTGCAATTTTG . 126.0 63.0 113.0 0.0 . 136 DISP2 85455 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 40660858 40660858 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DISP2 NM_033510 exon8 c.A2545T p.S849C AGCCCCAGCTGCG . 33.0 14.0 28.0 0.0 . 92 DKC1 1736 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 153996705 153996705 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DKC1 NM_001363 exon8 c.A769G p.K257E AGTGAAAAGGTAT . 30.0 27.0 40.0 0.0 . 227 DLG5 9231 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 79601686 79601686 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DLG5 NM_004747 exon7 c.A1390G p.T464A CAGATGTGCTGCT . 43.0 17.0 54.0 0.0 . 98 DMBT1 1755 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 124402796 124402796 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DMBT1 NM_007329 exon53 c.A7124G p.Y2375C GCTGCTACCGAGG . 72.0 52.0 144.0 0.0 . 494 DNAH10 196385 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 124285839 124285839 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DNAH10 NM_207437 exon15 c.G2120A p.G707E CAGCTGGGATACA . 74.0 38.0 76.0 0.0 . 95 DNAH10 196385 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 124383215 124383215 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DNAH10 NM_207437 exon55 c.T9140A p.L3047Q AGCGTCTGGATGG . 92.0 44.0 92.0 0.0 . 95 DNAH11 8701 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 21646303 21646303 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DNAH11 . . . . ACACTATGCCCCT . 57.0 26.0 65.0 0.0 . 146 DNAH11 8701 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 7 21630534 21630534 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DNAH11 NM_001277115 exon13 c.2170-2A>T . TTTAATAGCTAGT . 194.0 99.0 236.0 0.0 . 146 DNAH3 55567 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 21136500 21136500 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DNAH3 NM_017539 exon9 c.A1400C p.H467P ACTTTGTGTATCA . 68.0 35.0 51.0 0.0 . 167 DNAH6 1768 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 84954900 84954900 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DNAH6 NM_001370 exon61 c.A10080G p.R3360R TTCAAGAGGACTT . 77.0 35.0 78.0 0.0 . 69 DNAH6 1768 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 85024758 85024758 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DNAH6 NM_001370 exon70 c.T11457A p.H3819Q AATGCATGAAAAT . 57.0 33.0 65.0 0.0 . 69 DNAH8 1769 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 38816528 38816528 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DNAH8 NM_001206927 exon37 c.A5150G p.Y1717C GGGTTTATCTTGA . 107.0 48.0 107.0 0.0 . 615 DNAH9 1770 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 11809030 11809030 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DNAH9 NM_001372 exon61 c.G11653A p.D3885N GCCCTAGATTTTG . 39.0 32.0 84.0 0.0 . 168 DNAJB6 10049 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 7 157160147 157160147 + Nonsense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DNAJB6 NM_058246 exon5 c.G316T p.G106X TTTGGTGGAAGGG . 59.0 29.0 75.0 0.0 . 93 DNAJC13 23317 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 132153447 132153447 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DNAJC13 NM_015268 exon2 c.A53G p.H18R CAAAACATTCATG . 26.0 15.0 43.0 0.0 . 272 DNAJC18 202052 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 138760775 138760775 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DNAJC18 NM_152686 exon5 c.A588G p.T196T GTCATCTGTCACA . 53.0 27.0 57.0 0.0 . 227 DNAJC6 9829 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 65852603 65852603 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DNAJC6 NM_001256864 exon8 c.A1104G p.L368L CCGGCTACAGGCT . 118.0 47.0 122.0 0.0 . 272 DNM3 26052 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 172007520 172007520 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DNM3 NM_001136127 exon7 c.T911C p.L304S GACAGTTGCTCTC . 549.0 125.0 293.0 1.0 . 90 DOCK10 55619 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 225635277 225635277 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DOCK10 NM_014689 exon54 c.T6290G p.L2097W TCCTTCAAAAGCT . 95.0 37.0 106.0 0.0 . 92 DOCK11 139818 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 117722105 117722105 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DOCK11 NM_144658 exon17 c.A1801G p.I601V GATTGTATTACTT . 47.0 45.0 54.0 0.0 . 93 DOCK11 139818 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 117722147 117722147 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DOCK11 NM_144658 exon17 c.T1843G p.C615G AAGAATTGCCAAA . 46.0 41.0 57.0 0.0 . 93 DOCK2 1794 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 169122911 169122911 + Silent SNP G G T rs199921409 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DOCK2 NM_004946 exon10 c.G948T p.T316T GTGCACGCAGGGA . 56.0 16.0 75.0 0.0 G|0.999;A|0.001 97 DOCK2 1794 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 169144485 169144485 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DOCK2 NM_004946 exon21 c.A2129T p.Y710F TGGCTTACAAGTA . 64.0 35.0 96.0 0.0 . 97 DOCK2 1794 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 169188534 169188534 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DOCK2 NM_004946 exon25 c.A2459C p.Y820S TCCTGTATGAGTT . 52.0 20.0 77.0 0.0 . 97 DOPEY2 9980 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 37572789 37572789 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DOPEY2 NM_005128 exon4 c.A481T p.I161F TCCGAGATCTCCG . 31.0 14.0 27.0 0.0 . 91 DOPEY2 9980 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 37605269 37605269 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DOPEY2 NM_005128 exon15 c.A2518G p.S840G TATAAGAGCTCTG . 158.0 74.0 191.0 0.0 . 91 DPCR1 135656 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 30919181 30919181 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DPCR1 NM_080870 exon2 c.T2940A p.P980P AGAGCCTACAGAA . 70.0 36.0 62.0 0.0 . 90 DPP3 10072 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 66258740 66258740 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DPP3 NM_130443 exon7 c.T684C p.S228S GGACTCTGAGGTG . 104.0 47.0 162.0 1.0 . 46 DPP4 1803 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 162851476 162851476 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DPP4 NM_001935 exon25 c.G2194T p.A732S CCATTGCCTGGAA . 183.0 89.0 203.0 0.0 . 93 DPRX 503834 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 54139945 54139945 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DPRX NM_001012728 exon3 c.T279A p.G93G AGAGGGTGGGGTC . 65.0 25.0 98.0 0.0 . 90 DPY19L1 23333 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 35053222 35053222 + Silent SNP G G A rs184995902 TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DPY19L1 NM_015283 exon4 c.C288T p.P96P GACAAGGGGGTAT . 237.0 112.0 222.0 0.0 G|0.999;A|0.000 68 DRAP1 10589 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 11 65688799 65688799 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DRAP1 NM_006442 exon7 c.513-2A>T . CCCTGCAGCCCCC . 148.0 80.0 168.0 0.0 . 90 DSE 29940 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 116747748 116747748 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DSE NM_001080976 exon3 c.A428G p.D143G TGAAAGATGCTCC . 33.0 5.0 50.0 0.0 . 91 DSEL 92126 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 65180193 65180193 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DSEL NM_032160 exon2 c.T1683C p.F561F ACTCACAAATACC . 109.0 44.0 105.0 0.0 . 157 DSG3 1830 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 29039011 29039011 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DSG3 NM_001944 exon5 c.C388A p.L130I CGGGCTCTAAATG . 165.0 67.0 176.0 0.0 . 98 DTNA 1837 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 18 32444004 32444004 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DTNA NM_001390 exon16 c.A1640T p.E547V AGTTGGAGGGTCT . 35.0 19.0 35.0 0.0 . 153 DTX3 196403 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 58001020 58001020 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DTX3 NM_178502 exon5 c.T374A p.L125H CCCCTCTCCGAGC . 44.0 21.0 50.0 0.0 . 1083 DUSP27 92235 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 167096996 167096996 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DUSP27 NM_001080426 exon5 c.A2628T p.E876D CAAGGAAGATGAG . 100.0 73.0 60.0 0.0 . 71 DYDC1 143241 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 82102044 82102044 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DYDC1 NM_001269053 exon4 c.C323G p.A108G TCTTGAGCTCTCT . 67.0 29.0 84.0 0.0 . 68 DYNC2H1 79659 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 102984375 102984375 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DYNC2H1 NM_001377 exon2 c.A305T p.E102V TGTTAGAGTCACC . 122.0 53.0 140.0 0.0 . 68 DYNC2H1 79659 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 103018556 103018556 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DYNC2H1 NM_001377 exon19 c.G2758T p.D920Y GTGATTGATGATC . 43.0 21.0 49.0 0.0 . 68 DYSF 8291 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 71780941 71780941 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DYSF NM_001130982 exon22 c.C2031T p.C677C AGGGTGCCACTAC . 53.0 21.0 49.0 0.0 . 158 DZIP3 9666 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 108396342 108396342 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DZIP3 NM_014648 exon26 c.2782-2A>T . TCTACCAGACACA . 207.0 95.0 248.0 1.0 . 91 DZIP3 9666 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 108396438 108396438 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . DZIP3 NM_014648 exon26 c.A2876T p.E959V GTCCTGAGATACT . 194.0 88.0 291.0 0.0 . 91 E4F1 1877 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 2282755 2282755 + Splice_Site SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . E4F1 NM_004424 exon6 c.731-2A>C . CTCTGCAGATGAG . 36.0 21.0 56.0 0.0 . 187 ECE2 9718 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 184009911 184009911 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ECE2 NM_014693 exon19 c.G2537T p.S846I CCCACAGCCCTGC . 106.0 26.0 119.0 0.0 . 94 ECSCR 641700 broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 138837135 138837135 + Missense_Mutation SNP G G T rs199523425 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . . CCTGGGGTACCAG . 73.0 43.0 105.0 1.0 . . ECT2L 345930 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 139164260 139164260 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ECT2L NM_001195037 exon5 c.A487G p.T163A GCTGCTACTTATG . 64.0 19.0 68.0 0.0 . 22 EDAR 10913 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 109527291 109527291 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EDAR NM_022336 exon8 c.A671T p.H224L CCCGGGTGGCTGG . 80.0 42.0 90.0 1.0 . 92 EDC4 23644 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 67909967 67909967 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EDC4 NM_014329 exon2 c.A202G p.T68A CTTCGGACCATGC . 30.0 25.0 96.0 0.0 . 92 EDEM2 55741 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 33714169 33714169 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EDEM2 NM_018217 exon8 c.A854G p.K285R ATGGCTTTGTTAT . 68.0 26.0 99.0 0.0 . 90 EFHA1 221154 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 22113457 22113457 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EFHA1 NM_152726 exon4 c.A450T p.R150S AAGGTCTCTGAAA . 182.0 84.0 197.0 0.0 . 90 EFHB 151651 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 19921298 19921298 + Splice_Site SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EFHB NM_144715 exon14 c.2329-2A>G . GCAATCTAGAAAA . 47.0 25.0 40.0 0.0 . 22 EFTUD1 79631 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 82444096 82444096 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EFTUD1 NM_024580 exon18 c.G2699A p.S900N AATTTACTTAGGT . 98.0 41.0 84.0 0.0 . 91 EHMT1 79813 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 140695341 140695341 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EHMT1 NM_024757 exon18 c.G2617T p.G873C GACGGAGGCTGGA . 58.0 45.0 134.0 0.0 . 154 EIF3D 8664 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 36920644 36920644 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EIF3D NM_003753 exon4 c.A305T p.Q102L CCTACCTGGGCAA . 56.0 28.0 75.0 0.0 . 69 ELANE 1991 broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 853327 853327 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ELANE NM_001972 exon3 c.A290C p.Q97P CCCGGCAGGTGTT . 138.0 54.0 152.0 1.0 . 91 ELFN2 114794 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 37769351 37769351 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ELFN2 NM_052906 exon3 c.A2224T p.T742S AGTAGGTGGAGTC . 44.0 18.0 51.0 0.0 . 70 ELMOD2 255520 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 4 141448650 141448650 + Splice_Site SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ELMOD2 NM_153702 exon3 c.171+2T>C . ATAAGGTAGGATA . 272.0 115.0 375.0 0.0 . 91 ELSPBP1 64100 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 48519284 48519284 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ELSPBP1 NM_022142 exon4 c.T343G p.C115G AAATTCTGTGAAA . 57.0 19.0 82.0 0.0 . 90 EML5 161436 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 14 89154769 89154769 + Frame_Shift_Del DEL T T - novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EML5 NM_183387 exon18 c.2588delA p.N863fs GTGTCATTTTTCC . 56.0 23.0 62.0 0.0 . 93 EMR3 84658 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 14749129 14749129 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EMR3 NM_032571 exon11 c.T1272A p.G424G CAAAGCACCGGCG . 55.0 30.0 78.0 0.0 . 528 EMR3 84658 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 14755018 14755018 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EMR3 NM_032571 exon9 c.A952T p.R318W CATCCCTGGACCA . 66.0 30.0 75.0 0.0 . 528 EN1 2019 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 119600649 119600649 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EN1 NM_001426 exon2 c.G1044T p.K348N CCAGATCTTGATC . 44.0 18.0 53.0 0.0 . 154 ENPP2 5168 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 120594814 120594814 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ENPP2 NM_006209 exon19 c.T1728C p.N576N CCCATTATTAGGA . 89.0 34.0 63.0 0.0 . 292 EPB41L3 23136 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 18 5396213 5396213 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EPB41L3 NM_012307 exon19 c.A2960G p.Y987C GATTCATATGTGA . 36.0 31.0 80.0 0.0 . 95 EPB41L3 23136 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 5416315 5416315 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EPB41L3 NM_012307 exon13 c.A1569G p.T523T GGGAGATGTGGGG . 26.0 19.0 35.0 0.0 . 95 EPB42 2038 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 43500883 43500883 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EPB42 NM_000119 exon7 c.A1013G p.Y338C TCATTATAGTATT . 139.0 65.0 120.0 0.0 . 92 EPHB3 2049 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 184298263 184298263 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EPHB3 NM_004443 exon12 c.T2246A p.L749Q AGTACCTGTCCGA . 80.0 35.0 105.0 0.0 . 1455 EPS15 2060 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 51864724 51864724 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EPS15 NM_001981 exon20 c.A2032G p.N678D TATTGTTGGCTGC . 46.0 21.0 49.0 0.0 . 1082 ERI3 79033 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 44713653 44713653 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ERI3 NM_024066 exon8 c.G889T p.G297C TGAGGCCCTTGTT . 64.0 29.0 74.0 0.0 . 92 ESM1 11082 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 54281099 54281099 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ESM1 NM_001135604 exon1 c.T247G p.C83G GCTGACACCTCAG . 91.0 52.0 124.0 1.0 . 90 EXOSC7 23016 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 45046818 45046818 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EXOSC7 NM_015004 exon6 c.G527C p.G176A AAGAGGGGTCGAA . 114.0 47.0 132.0 0.0 . 90 EYS 346007 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 65301602 65301602 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EYS NM_001142800 exon26 c.T4158G p.D1386E TCTCCTATCAGGA . 74.0 28.0 95.0 1.0 . 660 EYS 346007 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 6 66204911 66204911 + Frame_Shift_Del DEL T T - novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . EYS NM_001142801 exon4 c.393delA p.K131fs CATTCCTTTTAGT . 99.0 44.0 102.0 0.0 . 660 F2RL3 9002 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 17000522 17000522 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . F2RL3 NM_003950 exon2 c.T248A p.L83H CCGCCCTCTATGG . 25.0 13.0 20.0 0.0 . 226 F5 2153 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 169521814 169521814 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . F5 NM_000130 exon8 c.A1277T p.Q426L CTGACCTGGGCTC . 184.0 138.0 116.0 0.0 . 157 FAHD2B 151313 broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 97757306 97757306 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAHD2B NM_199336 exon2 c.A138T p.T46T ATTCCCTGTCTCC . 178.0 75.0 225.0 2.0 . 90 FAIM2 23017 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 50294962 50294962 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAIM2 NM_012306 exon2 c.A162T p.P54P GGGGGCTGGGGGG . 33.0 12.0 23.0 0.0 . 230 FAM102B 284611 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 109171192 109171192 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM102B NM_001010883 exon8 c.A828T p.S276S AGCTTCAGAAAAA . 128.0 65.0 129.0 0.0 . 135 FAM107B 83641 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 14563994 14563994 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM107B NM_031453 exon4 c.A678T p.P226P CAATTCTGGTTTG . 59.0 26.0 73.0 0.0 . 156 FAM120B 84498 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 170627636 170627636 + Missense_Mutation SNP G G T rs201916124 TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM120B NM_032448 exon2 c.G1158T p.R386S ACCCAGGCAAGAA . 166.0 77.0 244.0 0.0 G|0.999;T|0.001 91 FAM131B 9715 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 143054107 143054107 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM131B NM_001031690 exon7 c.G619T p.A207S CTTGAGCCAGGGC . 99.0 44.0 132.0 0.0 . 90 FAM157B 100132403 broad.mit.edu;ucsc.edu;mdanderson.org 37 9 141109873 141109873 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001145249 exon3 c.A502C p.K168Q GCCACGAAGCGCA . 369.0 109.0 587.0 0.0 . . FAM168B 130074 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 131813019 131813019 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM168B NM_001009993 exon5 c.G301A p.G101S ACGTGCCTTGCTG . 111.0 48.0 117.0 0.0 . 90 FAM171B 165215 broad.mit.edu;bcgsc.ca 37 2 187627316 187627316 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM171B NM_177454 exon8 c.A2247G p.G749G GAGTGGAACCACC . 125.0 7.0 145.0 1.0 . 141 FAM181A 90050 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 94395161 94395161 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM181A NM_138344 exon3 c.T716A p.L239Q AGCCCCTGGGACC . 22.0 15.0 42.0 0.0 . 90 FAM194A 131831 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 150396254 150396254 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM194A NM_152394 exon10 c.A1199C p.Q400P CTTAGTTGAAAAT . 230.0 87.0 222.0 0.0 . 93 FAM205A 259308 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 34723610 34723610 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001141917 exon4 c.T3627G p.S1209S GAAGCTAGACTCT . 34.0 12.0 29.0 0.0 . . FAM214A 56204 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 15 52879347 52879347 + Splice_Site SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_019600 exon12 c.2877+1G>A . CACATACCACTTG . 63.0 25.0 114.0 0.0 . . FAM227B 196951 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 49867301 49867301 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_152647 exon8 c.A552C p.R184S AAAAACTCTTTCC . 271.0 115.0 329.0 0.0 . . FAM47C 442444 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 37027900 37027900 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM47C NM_001013736 exon1 c.C1417T p.H473Y GTGTCCCATCTCT . 50.0 46.0 54.0 0.0 . 111 FAM5B 57795 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 177226313 177226313 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM5B NM_021165 exon4 c.A462G p.G154G CATAGGAGAAGAG . 309.0 234.0 191.0 0.0 . 28 FAM69C 125704 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 72114218 72114218 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM69C NM_001044369 exon2 c.A499T p.S167C CCAGGCTGCTGTT . 61.0 32.0 60.0 0.0 . 68 FAM71B 153745 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 156593123 156593123 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM71B NM_130899 exon1 c.T57A p.S19R GAACGCACTCATT . 79.0 33.0 140.0 1.0 . 96 FAM74A3 728495 broad.mit.edu;bcgsc.ca;mdanderson.org 37 9 40716160 40716160 + RNA SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM74A3 . . . . GACATGGAGAGAG . 594.0 137.0 532.0 0.0 . 23 FAM83H 286077 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 8 144808647 144808647 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM83H NM_198488 exon5 c.A2984T p.Q995L TCGGGTTGGCCGT . 27.0 13.0 31.0 0.0 . 92 FAM9A 171482 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 8767070 8767070 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAM9A NM_174951 exon3 c.A157T p.R53W CCTTCCTGCTGCG . 72.0 62.0 106.0 0.0 . 130 FAN1 22909 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 31197069 31197069 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAN1 NM_001146095 exon2 c.A203T p.D68V ACAATGACTTCGT . 157.0 63.0 140.0 0.0 . 90 FANCM 57697 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 45658267 45658267 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FANCM NM_020937 exon20 c.A5042T p.N1681I ATGTAAATGATAA . 106.0 44.0 111.0 0.0 . 569 FAT1 2195 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 187538294 187538294 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAT1 NM_005245 exon11 c.G8940A p.V2980V TTTCTTCACATAT . 47.0 36.0 126.0 0.0 . 34 FAT1 2195 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 187539226 187539226 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAT1 NM_005245 exon10 c.A8514T p.S2838S GGTTCCTGAGTCA . 48.0 29.0 83.0 0.0 . 34 FAT2 2196 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 150945854 150945854 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAT2 NM_001447 exon1 c.A2639C p.H880P TCCAGGTGTCCTG . 84.0 33.0 107.0 0.0 . 96 FAT2 2196 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 150946124 150946124 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAT2 NM_001447 exon1 c.T2369C p.V790A ACTGTTACATTGA . 51.0 24.0 52.0 0.0 . 96 FAT3 120114 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 92523226 92523226 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAT3 NM_001008781 exon7 c.A4453T p.T1485S GAAGCCACAGATA . 131.0 61.0 138.0 0.0 . 73 FAT4 79633 broad.mit.edu;ucsc.edu;bcgsc.ca 37 4 126242079 126242079 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAT4 NM_024582 exon1 c.A4513T p.I1505L GTGCCAATAGAAA . 93.0 32.0 138.0 2.0 . 108 FAT4 79633 broad.mit.edu;ucsc.edu;bcgsc.ca 37 4 126328166 126328166 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAT4 NM_024582 exon3 c.A5439T p.L1813L ACTGCTAGTTCGT . 80.0 12.0 116.0 1.0 . 108 FAT4 79633 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 126241950 126241950 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAT4 NM_024582 exon1 c.C4384A p.Q1462K ATTCAACAGATGC . 176.0 19.0 231.0 1.0 . 108 FAT4 79633 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 4 126328165 126328165 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FAT4 NM_024582 exon3 c.T5438C p.L1813P CACTGCTAGTTCG . 80.0 12.0 117.0 0.0 . 108 FAXDC2 10826 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 154200873 154200873 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_032385 exon8 c.C792T p.G264G GTGGTAGCCACAG . 164.0 83.0 217.0 1.0 . . FBN1 2200 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 48756135 48756135 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FBN1 NM_000138 exon41 c.C5026A p.P1676T AGTCTGGAGGACA . 57.0 24.0 77.0 0.0 . 92 FBN2 2201 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 127609596 127609596 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FBN2 NM_001999 exon61 c.A7776C p.P2592P ACTGCCTGGAGTG . 150.0 78.0 202.0 0.0 . 146 FBN2 2201 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 127653902 127653902 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FBN2 NM_001999 exon36 c.T4656C p.G1552G ATAGCGACCAGGC . 181.0 94.0 236.0 0.0 . 146 FBN3 84467 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 8175948 8175948 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FBN3 NM_032447 exon32 c.T4204A p.C1402S CCTGGCAGGCCCG . 50.0 17.0 63.0 0.0 . 100 FBRS 64319 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 16 30680873 30680873 + Silent SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FBRS NM_001105079 exon12 c.G1290C p.P430P CCCACCGGGAGCC . 72.0 32.0 64.0 0.0 . 23 FBXO27 126433 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 19 39517611 39517611 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FBXO27 NM_178820 exon5 c.A607T p.R203X GGAGTCTGTACAT . 85.0 26.0 88.0 0.0 . 227 FBXW10 10517 broad.mit.edu;mdanderson.org 37 17 18653220 18653220 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FBXW10 NM_001267585 exon3 c.T856C p.S286P CACCTCTCCAAGT . 506.0 156.0 652.0 0.0 . 91 FCRL5 83416 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 157488541 157488541 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FCRL5 NM_031281 exon14 c.A2692T p.T898S GATAGGTGGGCTC . 182.0 34.0 96.0 0.0 . 156 FCRL5 83416 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 157514159 157514159 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FCRL5 NM_031281 exon5 c.A737T p.Q246L GTAATCTGGAAAT . 274.0 198.0 145.0 1.0 . 156 FCRLA 84824 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 161682966 161682966 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FCRLA NM_001184866 exon6 c.T945A p.P315P TGGGCCTCTGCCT . 161.0 118.0 91.0 0.0 . 226 FER1L5 90342 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 97315365 97315365 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FER1L5 NM_001113382 exon5 c.T345C p.T115T GTGTACTGTCACC . 74.0 28.0 76.0 0.0 . 23 FER1L6 654463 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 124987506 124987506 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FER1L6 NM_001039112 exon8 c.A643T p.T215S TTGAAGACCAGCC . 216.0 95.0 323.0 0.0 . 100 FER1L6 654463 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 124998413 124998413 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FER1L6 NM_001039112 exon12 c.A1516G p.I506V GTTTCTATTGGTA . 60.0 19.0 72.0 0.0 . 100 FERD3L 222894 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 19184845 19184845 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FERD3L NM_152898 exon1 c.A141T p.R47R TCCCTCTCGGAGC . 37.0 18.0 44.0 0.0 . 153 FGF21 26291 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 49261303 49261303 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FGF21 NM_019113 exon3 c.A456T p.P152P GTCCCCACACCGG . 164.0 59.0 188.0 0.0 . 522 FHDC1 85462 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 153897040 153897040 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FHDC1 NM_033393 exon11 c.C2597A p.S866Y GAGGCTCCCTGAA . 177.0 83.0 243.0 0.0 . 136 FKBP4 2288 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 2909266 2909266 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FKBP4 NM_002014 exon7 c.A824G p.E275G TGAAAGAGCGGGG . 50.0 22.0 49.0 0.0 . 226 FLG 2312 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 152286887 152286887 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FLG NM_002016 exon3 c.A475G p.K159E TTTCTTTTTTTTC . 111.0 80.0 58.0 0.0 . 106 FLJ33360 0 broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 6312538 6312538 + RNA SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . . CCAGCCTGGCAGG . 76.0 37.0 90.0 0.0 . . FLNC 2318 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 128488063 128488063 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FLNC NM_001127487 exon26 c.A4521T p.P1507P CACCCCAGCCACT . 138.0 50.0 152.0 0.0 . 141 FLNC 2318 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 128494857 128494857 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FLNC NM_001458 exon42 c.T7026A p.A2342A GGAGGCTGGCGCT . 56.0 24.0 66.0 0.0 . 141 FLRT2 23768 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 86089087 86089087 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FLRT2 NM_013231 exon2 c.A1229G p.D410G TTCCTGACTGGGA . 189.0 75.0 211.0 0.0 . 94 FLT3 2322 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 13 28601380 28601380 + Splice_Site SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FLT3 NM_004119 exon18 c.2054-2A>G . TGGTCCTGAAATA . 52.0 29.0 67.0 0.0 . 42117 FLT4 2324 broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 180037027 180037027 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FLT4 NM_182925 exon29 c.3687-2A>T . AATACCTGTGGGG . 47.0 17.0 62.0 1.0 . 1490 FMN1 342184 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 33091016 33091016 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FMN1 NM_001103184 exon15 c.A3450G p.I1150M TTTAGATATGTTT . 62.0 27.0 77.0 0.0 . 23 FMO2 2327 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 171174726 171174726 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FMO2 NM_001460 exon7 c.T1136C p.F379S CCATTTTCCCAAC . 116.0 80.0 76.0 0.0 . 91 FNDC3A 22862 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 49781371 49781371 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FNDC3A NM_001079673 exon26 c.A3437T p.Q1146L TCTCTCAGAGGAC . 136.0 126.0 158.0 0.0 . 278 FNIP1 96459 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 131066598 131066598 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FNIP1 NM_001008738 exon3 c.A353T p.Q118L CTTACCTGGTACT . 115.0 46.0 172.0 0.0 . 92 FOLR1 2348 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 71907162 71907162 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FOLR1 NM_016729 exon4 c.T715A p.W239R GGGCCCTGGGCAG . 84.0 39.0 99.0 0.0 . 91 FOLR4 390243 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 94040439 94040439 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FOLR4 NM_001199206 exon3 c.T457A p.W153R TCCAACTGGCGTG . 65.0 30.0 97.0 0.0 . 23 FOS 2353 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 75747981 75747981 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FOS NM_005252 exon4 c.A997T p.S333C ACTCCCAGCTGCA . 34.0 16.0 39.0 0.0 . 847 FOXJ1 2302 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 74133497 74133497 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FOXJ1 NM_001454 exon3 c.G1203T p.E401D CCCAGCCTCAAAG . 10.0 4.0 19.0 0.0 . 227 FOXK1 221937 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 4794986 4794986 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FOXK1 NM_001037165 exon4 c.A1022G p.Y341C ACCCCTACTACCG . 99.0 29.0 105.0 0.0 . 516 FOXS1 2307 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 20 30432970 30432970 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FOXS1 NM_004118 exon1 c.C376T p.P126S TGGCGGGGCCCCG . 27.0 13.0 27.0 0.0 . 69 FPR1 2357 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 52249744 52249744 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FPR1 NM_001193306 exon3 c.T504A p.P168P TTTACCAGGTACT . 48.0 24.0 54.0 0.0 . 524 FRAS1 80144 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 79229364 79229364 + Splice_Site SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FRAS1 NM_001166133 exon15 c.1678+1G>T . GTAGCGGTGAGTG . 76.0 27.0 115.0 0.0 . 68 FRAS1 80144 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 79285157 79285157 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FRAS1 NM_001166133 exon22 c.A2671T p.S891C ACCTGCAGCACCA . 80.0 33.0 100.0 0.0 . 68 FRAS1 80144 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 79458286 79458286 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FRAS1 NM_025074 exon72 c.T11230A p.Y3744N ACAATCTACAATG . 87.0 31.0 119.0 0.0 . 68 FREM1 158326 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 14808126 14808126 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FREM1 NM_144966 exon18 c.A2900G p.E967G CCAATCTCGCCAC . 112.0 82.0 105.0 1.0 . 138 FREM2 341640 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 39262741 39262741 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FREM2 NM_207361 exon1 c.A1260T p.A420A AGGAGCAGCTTCA . 60.0 28.0 77.0 0.0 . 100 FREM2 341640 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 39357294 39357294 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FREM2 NM_207361 exon5 c.T5729A p.V1910E GAGATGTGAGCCA . 103.0 42.0 104.0 0.0 . 100 FRY 10129 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 32812069 32812069 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FRY NM_023037 exon44 c.A6364T p.S2122C CTCTTCAGTCTGC . 55.0 27.0 88.0 0.0 . 142 FRY 10129 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 32841436 32841436 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FRY NM_023037 exon55 c.G8076C p.M2692I GCTTATGTGTGAC . 36.0 15.0 51.0 0.0 . 142 FSHR 2492 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 49190265 49190265 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FSHR NM_000145 exon10 c.T1695C p.S565S GTCACTAGAGGAG . 76.0 36.0 85.0 0.0 . 527 FSIP2 401024 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 186671974 186671974 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FSIP2 NM_173651 exon17 c.A18208G p.K6070E GAATCTAAGGATG . 98.0 38.0 91.0 0.0 . 90 FSTL5 56884 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 162954782 162954782 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FSTL5 NM_020116 exon3 c.T155A p.V52D CCTTTGACTCTTG . 107.0 50.0 147.0 0.0 . 158 FXYD4 53828 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 43870979 43870979 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FXYD4 NM_001184963 exon6 c.T130G p.C44G CTGATCTGCGGAG . 83.0 38.0 88.0 0.0 . 90 FYCO1 79443 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 46011256 46011256 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FYCO1 NM_024513 exon7 c.A541G p.R181G GCGTCCTCCTGTG . 34.0 17.0 57.0 0.0 . 91 FZD2 2535 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 42635241 42635241 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . FZD2 NM_001466 exon1 c.G185T p.G62V TTCTGGGCCACAC . 69.0 36.0 85.0 0.0 . 660 GABBR1 2550 broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 29595353 29595353 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GABBR1 NM_001470 exon6 c.G567A p.Q189Q CGCGGGCTGGCAG . 27.0 11.0 21.0 1.0 . 521 GABRB2 2561 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 160753450 160753450 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GABRB2 NM_021911 exon10 c.T1116C p.Y372Y GGATCGATATTGG . 55.0 16.0 53.0 0.0 . 91 GABRG1 2565 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 46066495 46066495 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GABRG1 NM_173536 exon5 c.C588A p.P196P ATCCATGGGAAAG . 328.0 137.0 403.0 0.0 . 92 GABRG1 2565 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 4 46099287 46099287 + Nonsense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GABRG1 NM_173536 exon2 c.G184T p.G62X TATCTCCTTCATG . 126.0 66.0 204.0 1.0 . 92 GABRG3 2567 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 15 27777744 27777744 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_033223 exon10 c.1123-2A>T . GCTTGCAGAACTA . 57.0 29.0 72.0 0.0 . . GADL1 339896 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 30903131 30903131 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GADL1 NM_207359 exon2 c.T164C p.L55P ATTATTAGCCTAC . 129.0 70.0 117.0 0.0 . 90 GALC 2581 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 88401194 88401194 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GALC NM_000153 exon17 c.A1940T p.D647V GACTTGTCATTCA . 61.0 21.0 70.0 0.0 . 90 GALNT16 57452 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 14 69727044 69727044 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001168368 exon1 c.A37T p.T13S ATCCTGACCGTAG . 49.0 26.0 68.0 0.0 . . GALNTL6 442117 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 173730577 173730577 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GALNTL6 NM_001034845 exon6 c.A619G p.K207E CGCACCAAGAAAA . 85.0 27.0 104.0 0.0 . 137 GAPVD1 26130 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 9 128124887 128124887 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GAPVD1 NM_015635 exon27 c.A4326G p.A1442A CTAGGCAAATCCA . 30.0 23.0 62.0 0.0 . 93 GAS2L3 283431 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 101018227 101018227 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GAS2L3 NM_174942 exon10 c.A1644C p.P548P AAAGCCAGTCCCA . 95.0 37.0 102.0 0.0 . 227 GATA6 2627 broad.mit.edu;bcgsc.ca;mdanderson.org 37 18 19757000 19757000 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GATA6 NM_005257 exon3 c.G1220A p.G407D GCACCGGCCACTA . 27.0 6.0 24.0 0.0 . 514 GBAP1 2630 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 155185393 155185393 + RNA SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . . ATCCCAGGAGCCT . 193.0 66.0 111.0 0.0 . . GCN1L1 10985 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 120594786 120594786 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GCN1L1 NM_006836 exon27 c.A3098T p.E1033V AGCAACTCCGGGC . 56.0 18.0 73.0 0.0 . 94 GCNT7 140687 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 55071851 55071851 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . . TTAAGTTATGGGG . 221.0 94.0 208.0 0.0 . . GDF2 2658 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 48416370 48416370 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GDF2 NM_016204 exon1 c.T324C p.I108I CCGCACAATGTTG . 48.0 19.0 59.0 0.0 . 229 GEMIN5 25929 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 154287223 154287223 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GEMIN5 NM_015465 exon16 c.A2323G p.N775D CACCATTCTCAAC . 89.0 28.0 132.0 0.0 . 228 GEMIN5 25929 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 154317547 154317547 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GEMIN5 NM_015465 exon1 c.A147G p.P49P TGTCCCTGGACTC . 127.0 60.0 139.0 0.0 . 228 GEN1 348654 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 17959314 17959314 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GEN1 NM_182625 exon12 c.A1248T p.I416I TGAAATAGAATGG . 290.0 145.0 276.0 0.0 . 359 GGPS1 9453 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 235505654 235505654 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GGPS1 NM_001037277 exon4 c.G470A p.G157E TGTTTGGATTAGC . 55.0 46.0 114.0 0.0 . 90 GGT5 2687 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 24629889 24629889 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GGT5 NM_001099782 exon2 c.T257A p.M86K AGGCCCATGCTCT . 111.0 54.0 101.0 0.0 . 71 GHDC 84514 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 40345476 40345476 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GHDC NM_001142622 exon3 c.G124T p.G42W GGGCCCCCCATGC . 29.0 12.0 33.0 0.0 . 90 GIMAP4 55303 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 150269617 150269617 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GIMAP4 NM_018326 exon3 c.C459A p.F153L CATATTCACCCGG . 88.0 29.0 115.0 1.0 . 91 GJA4 2701 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 35259856 35259856 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GJA4 NM_002060 exon2 c.C42A p.V14V CCAGGTCCAGGAG . 79.0 30.0 84.0 0.0 . 90 GJA8 2703 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 147380840 147380840 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GJA8 NM_005267 exon2 c.A758T p.H253L CCCTCCACTCCAT . 184.0 136.0 91.0 0.0 . 138 GJB5 2709 broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 35223306 35223306 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GJB5 NM_005268 exon2 c.T375A p.G125G GCGGGGTGGGCTC . 66.0 36.0 83.0 2.0 . 91 GLB1L3 112937 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 134177095 134177095 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GLB1L3 NM_001080407 exon10 c.T954C p.D318D TAAAGATGCAAAG . 58.0 22.0 61.0 0.0 . 69 GLIPR1L1 256710 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 75728612 75728612 + Missense_Mutation SNP A A T rs143627655 byfrequency;alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GLIPR1L1 NM_152779 exon1 c.A104T p.D35V TTATAGACAACTG . 107.0 48.0 109.0 0.0 A|0.999;G|0.001 90 GLP1R 2740 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 39040694 39040694 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GLP1R NM_002062 exon6 c.T566A p.L189Q TCATCCTGCGAGC . 71.0 43.0 62.0 0.0 . 659 GLP2R 9340 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 9774103 9774103 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GLP2R NM_004246 exon10 c.A1096G p.I366V CTTCTCATTTCTA . 48.0 34.0 134.0 0.0 . 524 GLRA3 8001 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 175565106 175565106 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GLRA3 NM_006529 exon10 c.T1226A p.V409E GGCATTACCTGGA . 114.0 50.0 144.0 1.0 . 93 GLTSCR1 29998 broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 48197947 48197947 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GLTSCR1 NM_015711 exon8 c.G2859T p.L953L AGCGCTGCCCCAG . 39.0 18.0 34.0 0.0 . 48 GMIP 51291 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 19749243 19749243 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GMIP NM_016573 exon8 c.A586G p.K196E GCTCCTTGAACTC . 92.0 33.0 113.0 0.0 . 91 GNB1L 54584 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 19808139 19808139 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GNB1L NM_053004 exon4 c.A236T p.Q79L CGCCCCTGGGGCA . 82.0 32.0 107.0 0.0 . 290 GP6 51206 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 19 55538983 55538983 + Missense_Mutation SNP C C A rs41301959 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GP6 NM_016363 exon4 c.G573T p.W191C GGCTGACCACAGG . 56.0 34.0 78.0 0.0 . 92 GPR137C 283554 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 53100355 53100355 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPR137C NM_001099652 exon5 c.G975T p.Q325H GGCACAGAGATTA . 69.0 30.0 75.0 0.0 . 68 GPR139 124274 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 16 20084903 20084903 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPR139 NM_001002911 exon1 c.C36G p.S12R CAGCGAGCTGTTG . 115.0 52.0 126.0 0.0 . 92 GPR149 344758 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 154145340 154145340 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPR149 NM_001038705 exon2 c.A1139G p.Q380R GCGTTCTGCCTGC . 49.0 21.0 52.0 0.0 . 96 GPR149 344758 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 154145356 154145356 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPR149 NM_001038705 exon2 c.A1123G p.I375V TGATGATGCAGCC . 56.0 23.0 58.0 0.0 . 96 GPR156 165829 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 119886437 119886437 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPR156 NM_153002 exon9 c.T1887A p.P629P TGCCCCAGGAACA . 43.0 24.0 53.0 0.0 . 92 GPR158 57512 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 25887814 25887814 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPR158 NM_020752 exon11 c.C3259A p.L1087I GAGAAGCTTTTGA . 76.0 30.0 88.0 0.0 . 141 GPR173 54328 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 53106453 53106453 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPR173 NM_018969 exon2 c.T650C p.M217T GCAAGATGAAGCC . 30.0 27.0 20.0 0.0 . 130 GPR179 440435 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 36485679 36485679 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPR179 NM_001004334 exon11 c.G3773T p.S1258I TTGCCACTGTCTG . 44.0 20.0 43.0 0.0 . 93 GPR65 8477 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 88478190 88478190 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPR65 NM_003608 exon2 c.A999T p.L333F GGAATTAGAGGTC . 80.0 37.0 92.0 0.0 . 90 GPR83 10888 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 94113896 94113896 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPR83 NM_016540 exon4 c.C691A p.P231T CAGCTGGCTCAGG . 31.0 12.0 41.0 0.0 . 92 GPR85 54329 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 112724069 112724069 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPR85 NM_001146265 exon3 c.T708A p.S236R CTGGCCACTGGCT . 55.0 23.0 72.0 0.0 . 91 GPR98 84059 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 90059134 90059134 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPR98 NM_032119 exon59 c.G12133A p.E4045K ATTGATGAATCCC . 28.0 11.0 54.0 0.0 . 103 GPR98 84059 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 90055290 90055290 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPR98 NM_032119 exon58 c.A12005G p.N4002S CGTTCAATATTTC . 72.0 24.0 107.0 0.0 . 103 GPR98 84059 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 90077396 90077396 + Splice_Site SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPR98 NM_032119 exon65 c.13231+1G>T . TCGAAGGTAGGTT . 182.0 60.0 262.0 0.0 . 103 GPRC5A 9052 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 13061653 13061653 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPRC5A NM_003979 exon2 c.T470C p.M157T TGACCATGAATAG . 64.0 34.0 81.0 0.0 . 90 GPRC6A 222545 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 117114124 117114124 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPRC6A NM_148963 exon6 c.A1962T p.P654P GTCTTGTGGTTCT . 87.0 45.0 120.0 0.0 . 96 GPSM3 63940 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 32159648 32159648 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GPSM3 NM_022107 exon7 c.G183T p.Q61H TTCAGTCTGCAGG . 106.0 21.0 105.0 0.0 . 90 GRAMD2 196996 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 72455799 72455799 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GRAMD2 NM_001012642 exon10 c.T764C p.V255A GAAGCTACTTGGG . 85.0 38.0 87.0 0.0 . 90 GRHL2 79977 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 102611327 102611327 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GRHL2 NM_024915 exon8 c.A1046G p.E349G TTGAAGAGATTGC . 71.0 29.0 69.0 0.0 . 93 GRIA2 2891 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 158262575 158262575 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GRIA2 NM_000826 exon12 c.T2004C p.Y668Y TGCTTATGGAACA . 86.0 43.0 82.0 0.0 . 515 GRIA4 2893 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 105732861 105732861 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GRIA4 NM_001077244 exon5 c.A599T p.E200V TAGAAGAACTTGA . 90.0 41.0 98.0 0.0 . 230 GRIA4 2893 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 105769103 105769103 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GRIA4 NM_001077244 exon7 c.T835A p.W279R GATCGCTGGAAGA . 143.0 61.0 153.0 0.0 . 230 GRIA4 2893 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 105795169 105795169 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GRIA4 NM_001077243 exon12 c.A1521G p.R507R GGTACGAGAGGAG . 64.0 31.0 99.0 0.0 . 230 GRIA4 2893 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 105795274 105795274 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GRIA4 NM_001077243 exon12 c.T1626A p.P542P GGATCCTCTGGCC . 127.0 63.0 128.0 0.0 . 230 GRID2 2895 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 94436432 94436432 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GRID2 NM_001510 exon13 c.A2063G p.Y688C CGGTATATGAGCA . 80.0 38.0 88.0 0.0 . 159 GRID2IP 392862 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 6560210 6560210 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001145118 exon7 c.A1267T p.R423W GCCACCTGTGCTG . 67.0 28.0 65.0 0.0 . . GRK1 6011 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 114324036 114324036 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GRK1 NM_002929 exon2 c.T734A p.V245E TGAAAGTACACAG . 55.0 32.0 58.0 0.0 . 614 GRXCR1 389207 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 43022411 43022411 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GRXCR1 NM_001080476 exon3 c.T668A p.L223Q GAGAACTGCAAGA . 212.0 87.0 277.0 0.0 . 23 GTDC2 84892 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 43122344 43122344 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_032806 exon2 c.A580T p.M194L CCTCCATGAAGAA . 70.0 35.0 88.0 0.0 . . GTF2IRD2 84163 broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 74211994 74211994 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GTF2IRD2 NM_173537 exon16 c.T1857A p.T619T GGTGCCAGTGGAG . 340.0 36.0 386.0 1.0 . 23 GTF3C1 2975 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 27509073 27509073 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GTF3C1 NM_001520 exon14 c.A2235G p.P745P TCCACTTGGGCCC . 116.0 53.0 125.0 0.0 . 94 GYS1 2997 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 49473817 49473817 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . GYS1 NM_002103 exon14 c.A1795G p.K599E GGTATTTCCAGTC . 51.0 27.0 59.0 0.0 . 524 HABP4 22927 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 99250387 99250387 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HABP4 NM_014282 exon7 c.A1016G p.Y339C ATGACTATGAGGA . 67.0 22.0 76.0 0.0 . 91 HARS 3035 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140056273 140056273 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HARS NM_002109 exon10 c.A1160G p.E387G ATCCGCTCCACCC . 76.0 28.0 120.0 0.0 . 92 HAUS1 115106 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 43703286 43703286 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HAUS1 NM_138443 exon6 c.A622G p.M208V AGAGGCATGGATG . 190.0 82.0 258.0 0.0 . 91 HCN4 10021 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 15 73614832 73614832 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HCN4 NM_005477 exon8 c.C3602A p.S1201Y AGATTGGATGGCA . 143.0 65.0 175.0 0.0 . 96 HCRTR2 3062 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 55142234 55142234 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HCRTR2 NM_001526 exon5 c.A819G p.S273S TGTTTCACAGCCT . 130.0 63.0 161.0 0.0 . 525 HEBP1 50865 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 13140219 13140219 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HEBP1 NM_015987 exon3 c.A265T p.N89Y CTTCATTGGGGAA . 126.0 53.0 127.0 0.0 . 135 HECTD4 283450 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 112717077 112717077 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001109662 exon9 c.A1210C p.T404P ATCGGGTGGCAGA . 43.0 18.0 65.0 0.0 . . HEMGN 55363 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 9 100698475 100698475 + Nonsense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HEMGN NM_197978 exon2 c.G151T p.E51X ATGTTTCCTTTTC . 67.0 21.0 151.0 0.0 . 91 HEMK1 51409 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 50615001 50615001 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HEMK1 NM_016173 exon6 c.A611T p.Q204L ATGCTCAGAGGTA . 88.0 41.0 120.0 0.0 . 278 HEPHL1 341208 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 93806484 93806484 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HEPHL1 NM_001098672 exon8 c.C1383G p.I461M AGTCATCAAGGCA . 70.0 34.0 85.0 0.0 . 71 HERPUD2 64224 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 35733822 35733822 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HERPUD2 NM_022373 exon2 c.A119T p.H40L GATAGATGCGTTT . 59.0 33.0 73.0 0.0 . 93 HFE 3077 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 26091582 26091582 + Silent SNP A A G rs28934595 bycluster;alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HFE NM_139006 exon3 c.A381G p.Q127Q AATGCAAGAAGAC . 176.0 81.0 150.0 0.0 A|1.000;|0.000 90 HFM1 164045 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 91859872 91859872 + Missense_Mutation SNP T T A rs201897123 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HFM1 NM_001017975 exon4 c.A272T p.Q91L GCAAACTGGAATT . 170.0 71.0 173.0 0.0 T|0.999;C|0.001 112 HGFAC 3083 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 3447852 3447852 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HGFAC NM_001528 exon10 c.A1186T p.R396W TGCGGCAGGAGGC . 83.0 41.0 127.0 0.0 . 514 HIP1 3092 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 75192502 75192502 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HIP1 NM_005338 exon10 c.A869T p.Q290L GGCAGCTGGGGGA . 72.0 31.0 74.0 0.0 . 1085 HIST2H2AC 8338 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 149858769 149858769 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HIST2H2AC NM_003517 exon1 c.G245C p.R82P TCCCTCGTCACCT . 406.0 125.0 220.0 0.0 . 92 HIVEP3 59269 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 41990547 41990547 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HIVEP3 NM_024503 exon6 c.G5242A p.G1748S CGCGGCCTCGCAC . 93.0 46.0 108.0 0.0 . 157 HM13 81502 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 30102430 30102430 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HM13 NM_178581 exon1 c.C76T p.P26S CGGCCGCCTTCCA . 79.0 29.0 68.0 0.0 . 153 HMCN1 83872 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 185902889 185902889 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HMCN1 NM_031935 exon11 c.A1761T p.G587G TGCTGGAGAGTAT . 134.0 31.0 72.0 0.0 . 113 HMCN1 83872 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 186092186 186092186 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HMCN1 NM_031935 exon81 c.A12333G p.T4111T CATTACATGGCAT . 131.0 44.0 63.0 0.0 . 113 HMGN1 3150 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 40720227 40720227 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HMGN1 NM_004965 exon4 c.A117T p.A39A CGCTGCTGCCTTT . 80.0 33.0 102.0 0.0 . 658 HNRNPA3 220988 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 178081594 178081594 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HNRNPA3 NM_194247 exon7 c.A746G p.Y249C GAGGCTATGGTGG . 45.0 20.0 43.0 0.0 . 70 HNRNPR 10236 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 23637344 23637344 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd HNRPR,mouth,carcinoma,0 HNRNPR NM_001102398 exon11 c.G1514T p.R505I CCTCCTCTTCCTC . 50.0 14.0 45.0 0.0 . 24 HOXA13 3209 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 27238961 27238961 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HOXA13 NM_000522 exon1 c.A736G p.M246V CAGGCATGGGCTG . 83.0 36.0 74.0 0.0 . 658 HOXA2 3199 broad.mit.edu;mdanderson.org 37 7 27141915 27141915 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HOXA2 NM_006735 exon1 c.G205T p.A69S CGCCAGCGCCGTG . 12.0 7.0 11.0 0.0 . 92 HOXB6 3216 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 46675506 46675506 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HOXB6 NM_018952 exon3 c.T7A p.S3T AATAGGAACTCAT . 67.0 31.0 68.0 0.0 . 90 HOXC10 3226 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 54379618 54379618 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HOXC10 NM_017409 exon1 c.T575A p.L192Q CTCAGCTGGGGGG . 77.0 41.0 128.0 0.0 . 91 HPS4 89781 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 26849269 26849269 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HPS4 NM_022081 exon14 c.A2057C p.Q686P CCATCCTGAGGGT . 41.0 20.0 67.0 0.0 . 90 HS3ST4 9951 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 26147136 26147136 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HS3ST4 NM_006040 exon2 c.T938G p.V313G TTGAGGTGCTGGC . 110.0 43.0 97.0 0.0 . 67 HTR7 3363 broad.mit.edu;ucsc.edu;mdanderson.org 37 10 92503355 92503355 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HTR7 NM_019859 exon3 c.T1388A p.L463X CCTGCTAACCAAT . 42.0 7.0 85.0 0.0 . 91 HTT 3064 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 3189596 3189596 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HTT NM_002111 exon39 c.A5208T p.P1736P TTTGCCAGAAGAA . 18.0 13.0 50.0 0.0 . 281 HUS1 3364 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 48008897 48008897 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HUS1 NM_004507 exon6 c.G559T p.D187Y CTCCATCTAGGTT . 40.0 16.0 42.0 0.0 . 1109 HYDIN 54768 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 16 70995883 70995883 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . HYDIN NM_001270974 exon38 c.C5947A p.L1983M TTTCCAGGCTTTC . 62.0 34.0 110.0 0.0 . 92 ICA1 3382 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 8167517 8167517 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ICA1 NM_022307 exon13 c.A1316T p.Q439L GAGGCCTGTAAGT . 58.0 29.0 68.0 0.0 . 515 IDO1 3620 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 39785506 39785506 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IDO1 NM_002164 exon10 c.T1014A p.A338A GAAAGCTCTGGTC . 95.0 48.0 140.0 0.0 . 227 IFNA16 3449 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 21217242 21217242 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IFNA16 NM_002173 exon1 c.T63C p.S21S GCCCAGAGAACAG . 233.0 61.0 192.0 0.0 . 91 IFNA5 3442 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 21305011 21305011 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IFNA5 NM_002169 exon1 c.A245C p.E82A ATCATCTCATGGA . 95.0 65.0 95.0 0.0 . 91 IFNA8 3445 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 21409216 21409216 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IFNA8 NM_002170 exon1 c.T41A p.L14H TGGTGCTCAGCTA . 70.0 34.0 47.0 0.0 . 90 IFNB1 3456 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 21077590 21077590 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IFNB1 NM_002176 exon1 c.A279C p.Q93H TGAATCTTGTCTG . 70.0 14.0 63.0 1.0 . 155 IGF1R 3480 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 99478555 99478555 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IGF1R NM_000875 exon17 c.T3197A p.L1066Q GATTGCTGGGTGT . 75.0 35.0 87.0 0.0 . 1490 IGF2R 3482 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 160469571 160469571 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IGF2R NM_000876 exon18 c.A2510G p.D837G AAAAAGATCAGGT . 49.0 19.0 70.0 0.0 . 118 IGFBP4 3487 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 38612731 38612731 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IGFBP4 NM_001552 exon4 c.A673G p.K225E CGTGGCAAGTGCT . 79.0 39.0 123.0 1.0 . 522 IGLL1 3543 broad.mit.edu;ucsc.edu;mdanderson.org 37 22 23922353 23922353 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IGLL1 NM_020070 exon1 c.G25T p.G9C CAAGGCCCCCCTG . 21.0 10.0 16.0 0.0 . 90 IGLON5 402665 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 51828607 51828607 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001101372 exon4 c.C399A p.A133A CCCTGCCCGCATT . 46.0 21.0 61.0 0.0 . . IGSF1 3547 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 130419759 130419759 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IGSF1 NM_001555 exon4 c.C361A p.L121I ACTCTAGAACTTT . 40.0 38.0 35.0 0.0 . 133 IGSF22 283284 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 18743196 18743196 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IGSF22 NM_173588 exon4 c.C264T p.A88A CACCCGGGCTCGG . 26.0 22.0 77.0 0.0 . 140 IKZF1 10320 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 50450343 50450343 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IKZF1 NM_006060 exon5 c.A527T p.H176L AATGCCACCTCTG . 21.0 14.0 17.0 0.0 . 1242 IL12RB1 3594 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 18171954 18171954 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IL12RB1 NM_005535 exon15 c.T1769C p.I590T AACTCAATGGCGG . 268.0 122.0 307.0 0.0 . 91 IL13RA1 3597 ucsc.edu;bcgsc.ca 37 X 117910394 117910394 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IL13RA1 NM_001560 exon10 c.A1111G p.K371E AGGCTCAAGATTA . 30.0 5.0 42.0 0.0 . 554 IL1B 3553 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 113593196 113593196 + Splice_Site SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IL1B NM_000576 exon4 c.48-2A>G . TGCCACTGTAATA . 51.0 23.0 79.0 0.0 . 522 IL21R 50615 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 27448852 27448852 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IL21R NM_181079 exon5 c.A262T p.S88C TCCTGCAGCCTCC . 65.0 31.0 72.0 0.0 . 660 IL23R 149233 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 67666515 67666515 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IL23R NM_144701 exon5 c.T587A p.V196D TTTGGGTCCAAGC . 196.0 101.0 203.0 0.0 . 90 IL4R 3566 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 16 27374493 27374493 + Nonsense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IL4R NM_000418 exon11 c.C1820G p.S607X CCTTCTCAAGCCT . 40.0 20.0 34.0 0.0 . 227 IMPG2 50939 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 100964730 100964730 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IMPG2 NM_016247 exon12 c.C1459T p.H487Y CAGAATGAAGAGT . 125.0 59.0 112.0 0.0 . 93 INADL 10207 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 62456026 62456026 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . INADL NM_176877 exon28 c.A3857T p.E1286V GAGATGAACTCTT . 95.0 39.0 76.0 0.0 . 94 INPP4A 3631 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 99182502 99182502 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . INPP4A NM_001134224 exon22 c.A2305G p.N769D GGGTTTAACGTGC . 64.0 29.0 72.0 0.0 . 227 INPP4B 8821 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 4 143007366 143007366 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . INPP4B NM_003866 exon25 c.A2418G p.L806L ATTTTCTAGCAAT . 28.0 15.0 26.0 0.0 . 228 INSR 3643 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 7117093 7117093 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . INSR NM_000208 exon22 c.A4123T p.T1375S GCAAGGTCAGAAT . 125.0 51.0 138.0 1.0 . 1381 INTS6 26512 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 52025248 52025248 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . INTS6 NM_001039938 exon3 c.A252T p.G84G CGTAAGTCCTTCA . 99.0 45.0 113.0 1.0 . 227 IPO11 51194 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 61811284 61811284 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IPO11 NM_001134779 exon20 c.A1972G p.M658V CACAATATGTTGA . 77.0 36.0 95.0 1.0 . 227 IPO7 10527 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 9446500 9446500 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IPO7 NM_006391 exon11 c.A1181T p.Q394L CTGCCCAGACACT . 57.0 49.0 119.0 0.0 . 271 IRG1 730249 hgsc.bcm.edu;bcgsc.ca;mdanderson.org 37 13 77527812 77527812 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001258406 exon2 c.G240T p.V80V TTTTGTGAACGGT . 71.0 57.0 68.0 0.0 . . IRX4 50805 broad.mit.edu;mdanderson.org 37 5 1878691 1878691 + Nonsense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . IRX4 NM_016358 exon5 c.G952T p.E318X GGTCCTCGTCCAG . 15.0 8.0 12.0 0.0 . 226 ISM2 145501 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 77942113 77942113 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ISM2 NM_199296 exon7 c.G1541A p.S514N TCGGTGCTGATGA . 37.0 8.0 45.0 0.0 . 91 IST1 9798 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 71957226 71957226 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001270976 exon9 c.G834A p.Q278Q TTATCAGGCCTTT . 63.0 53.0 97.0 0.0 . . ITGA11 22801 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 68624266 68624266 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ITGA11 NM_001004439 exon14 c.G1701A p.E567E GTTGTCCTCCAGG . 104.0 57.0 100.0 0.0 . 538 ITGA11 22801 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 68624312 68624312 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ITGA11 NM_001004439 exon14 c.T1655A p.L552H TGGTTGAGGTCTC . 127.0 52.0 123.0 0.0 . 538 ITGA2 3673 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 52369005 52369005 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ITGA2 NM_002203 exon20 c.G2487A p.L829L AACGCTGAAAAAT . 79.0 31.0 80.0 2.0 . 226 ITGA4 3676 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 182339916 182339916 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ITGA4 NM_000885 exon4 c.T457G p.Y153D ATATTTTACATAA . 125.0 55.0 115.0 0.0 . 230 ITGAD 3681 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 31424529 31424529 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ITGAD NM_005353 exon16 c.T1958C p.V653A CCACCGTCTGTCT . 70.0 32.0 57.0 1.0 . 226 ITGAD 3681 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 31419776 31419776 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ITGAD NM_005353 exon10 c.A1040T p.Q347L CCTTCCAGCACGA . 58.0 32.0 60.0 0.0 . 226 ITGBL1 9358 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 102250520 102250520 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ITGBL1 NM_004791 exon7 c.T886G p.C296G TGTAATTGCGGAA . 56.0 50.0 65.0 0.0 . 92 ITIH4 3700 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 52860032 52860032 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ITIH4 NM_002218 exon7 c.631-2A>T . TGAGCCTGGAGGA . 51.0 17.0 73.0 0.0 . 46 ITPKB 3707 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 226835068 226835068 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ITPKB NM_002221 exon4 c.A2046T p.A682A GGCAGCTGCCTTG . 17.0 15.0 44.0 0.0 . 230 ITPR1 3708 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 4699946 4699946 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ITPR1 NM_001099952 exon13 c.G1135T p.D379Y GGAGGTGACAGCC . 80.0 39.0 100.0 0.0 . 710 ITPR3 3710 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 33655094 33655094 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ITPR3 NM_002224 exon45 c.T6167A p.L2056Q ATATCCTGGCGCT . 55.0 28.0 51.0 0.0 . 1085 JAM2 58494 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 27062262 27062262 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . JAM2 NM_021219 exon3 c.T218A p.V73D CCTTTGTCTACTA . 25.0 19.0 35.0 0.0 . 90 JMJD7-PLA2G4B 8681 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 42134021 42134021 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . JMJD7-PLA2G4B NM_005090 exon13 c.A1188T p.S396S AGCCTCAGAGCAC . 78.0 35.0 77.0 0.0 . 135 KANK4 163782 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 62733992 62733992 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KANK4 NM_181712 exon5 c.C2198T p.P733L TCCCCAGGCCCAC . 56.0 25.0 73.0 0.0 . 74 KAT6B 23522 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 76788413 76788413 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_012330 exon18 c.A3831T p.P1277P CCCGCCAGAAACA . 60.0 38.0 51.0 0.0 . . KATNAL2 83473 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 44589401 44589401 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd KATNAL2,NS,carcinoma,-1 KATNAL2 NM_031303 exon6 c.A392T p.E131V CCAGTGAACTTGC . 56.0 22.0 62.0 0.0 . 93 KBTBD8 84541 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 67054509 67054509 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KBTBD8 NM_032505 exon3 c.A1118T p.K373I TATCCAAACCATC . 90.0 48.0 104.0 0.0 . 587 KCNA1 3736 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 5021211 5021211 + Missense_Mutation SNP A A C rs146948558 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KCNA1 NM_000217 exon2 c.A667C p.I223L TTCTTCATCGTGG . 77.0 43.0 118.0 0.0 A|1.000;G|0.000 228 KCNA3 3738 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 111216504 111216504 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KCNA3 NM_002232 exon1 c.C928A p.L310M CCAGCAGTTCGAA . 68.0 33.0 47.0 0.0 . 95 KCNA5 3741 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 5154056 5154056 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KCNA5 NM_002234 exon1 c.C743T p.S248F CTGGGTCCGCGCG . 38.0 19.0 23.0 0.0 . 715 KCNC1 3746 broad.mit.edu;bcgsc.ca 37 11 17801169 17801169 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KCNC1 NM_001112741 exon3 c.A1671T p.P557P GTGCCCACCTGGT . 36.0 30.0 84.0 2.0 . 91 KCNH7 90134 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 163361126 163361126 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KCNH7 NM_033272 exon6 c.T955A p.S319T AATCTGATGTGGA . 112.0 48.0 135.0 1.0 . 95 KCNH8 131096 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 19492664 19492664 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KCNH8 NM_144633 exon10 c.A1593T p.P531P CTTTCCAGATGAA . 52.0 26.0 58.0 0.0 . 524 KCNJ18 100134444 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 17 21319679 21319679 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001194958 exon3 c.A1025G p.Y342C TTGACTACTCGCA . 67.0 10.0 90.0 0.0 . . KCNK10 54207 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 88707163 88707163 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KCNK10 NM_138318 exon3 c.A404G p.H135R AGAGCATGCTGCA . 32.0 19.0 25.0 0.0 . 95 KCNK13 56659 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 90650791 90650791 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KCNK13 NM_022054 exon2 c.A671T p.Y224F GGAGCTACTTTGA . 92.0 39.0 105.0 0.0 . 91 KCNT1 57582 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 138656968 138656968 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KCNT1 NM_020822 exon12 c.T1127A p.L376Q TGGTCCTGTGTGT . 62.0 45.0 136.0 0.0 . 137 KCTD19 146212 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 67325322 67325322 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KCTD19 NM_001100915 exon14 c.T2455C p.Y819H GTGCATAAAACAT . 50.0 46.0 136.0 0.0 . 69 KDM4C 23081 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 9 7046860 7046860 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KDM4C NM_001146696 exon16 c.2326-2A>T . CCCCCCAGGAATG . 29.0 27.0 90.0 0.0 . 228 KDR 3791 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 55971025 55971025 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KDR NM_002253 exon13 c.T1772G p.L591R ATTGGCAGAGGCT . 95.0 36.0 97.0 1.0 . 2298 KDR 3791 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 55984967 55984967 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KDR NM_002253 exon3 c.G162A p.R54R CTGTCCCCTGAAA . 115.0 60.0 121.0 0.0 . 2298 KIAA0556 23247 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 27760972 27760972 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIAA0556 NM_015202 exon16 c.C2691G p.H897Q ACTTCACGAGTCA . 108.0 54.0 143.0 1.0 . 141 KIAA0586 9786 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 58924599 58924599 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIAA0586 NM_001244189 exon13 c.A1644G p.Q548Q AGTACAAAACAAT . 71.0 33.0 100.0 0.0 . 23 KIAA1024 23251 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 79749742 79749742 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIAA1024 NM_015206 exon2 c.A1253G p.K418R TGCCAAAGGATCA . 191.0 86.0 216.0 0.0 . 183 KIAA1109 84162 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 123113385 123113385 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIAA1109 NM_015312 exon9 c.A903T p.G301G TATAGGACTTGTT . 110.0 54.0 95.0 0.0 . 80 KIAA1324L 222223 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 86571334 86571334 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIAA1324L NM_001142749 exon5 c.T741C p.S247S ACTTACAGAATGA . 85.0 34.0 106.0 0.0 . 97 KIAA1429 25962 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 95501074 95501074 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIAA1429 NM_015496 exon24 c.C5299A p.P1767T CCCGAGGACTTGG . 66.0 35.0 109.0 0.0 . 92 KIAA1549L 25758 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 33564933 33564933 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_012194 exon1 c.A933G p.S311S TGTCTCATCTCCC . 175.0 70.0 185.0 0.0 . . KIAA1551 55196 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 12 32137547 32137547 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_018169 exon4 c.A3658T p.R1220X GGAGAGAGAACTT . 72.0 27.0 83.0 0.0 . . KIAA1671 85379 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 25581013 25581013 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIAA1671 NM_001145206 exon9 c.A5269G p.S1757G CCCAAGAGCCCCA . 106.0 40.0 139.0 0.0 . 69 KIAA1751 85452 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 1888169 1888169 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIAA1751 NM_001080484 exon17 c.A1906T p.T636S GAGACGTGGTCTC . 100.0 47.0 133.0 0.0 . 69 KIAA1751 85452 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 1900247 1900247 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIAA1751 NM_001080484 exon11 c.A1072G p.R358G GCTTTCTGAGCTT . 43.0 21.0 51.0 0.0 . 69 KIAA1919 91749 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 111587712 111587712 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIAA1919 NM_153369 exon4 c.A947G p.D316G TTTTTGACAAGAA . 82.0 36.0 102.0 1.0 . 93 KIAA1919 91749 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 111587672 111587672 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIAA1919 NM_153369 exon4 c.A907G p.I303V AGCAACATTGGCA . 91.0 44.0 113.0 0.0 . 93 KIAA1967 57805 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 22476767 22476767 + Missense_Mutation SNP C C G rs201420827 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIAA1967 NM_021174 exon20 c.C2626G p.R876G ACCGCCCGGACGG . 28.0 11.0 58.0 0.0 C|0.999;T|0.000 92 KIF16B 55614 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 20 16485049 16485049 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIF16B NM_001199865 exon10 c.A1144T p.R382X TCAGTCTGGCTAT . 114.0 51.0 143.0 0.0 . 291 KIF17 57576 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 21013989 21013989 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIF17 NM_020816 exon8 c.A1830G p.L610L CAGGCCTAGTAAC . 62.0 29.0 65.0 0.0 . 94 KIF19 124602 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 72351335 72351335 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIF19 NM_153209 exon20 c.T2881C p.S961P GACTCCTCACCCC . 47.0 14.0 58.0 2.0 . 90 KIF20B 9585 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 91469185 91469185 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIF20B NM_016195 exon4 c.A318G p.S106S AAGCTCAGGGCAG . 69.0 53.0 174.0 1.0 . 93 KIF21A 55605 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 12 39727052 39727052 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIF21A NM_001173464 exon18 c.A2449T p.R817X GGTTTCTTTTTTG . 126.0 41.0 111.0 0.0 . 97 KIF26B 55083 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 245850542 245850542 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIF26B NM_018012 exon12 c.A4257T p.T1419T CCCCACATTAGCC . 38.0 30.0 85.0 1.0 . 25 KIF27 55582 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 86495242 86495242 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIF27 NM_017576 exon11 c.A2613T p.A871A AATTACTGCATCC . 66.0 18.0 72.0 0.0 . 523 KIF5A 3798 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 57970570 57970570 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIF5A NM_004984 exon20 c.T2225A p.L742Q TAGAGCTAGAGAA . 61.0 25.0 72.0 0.0 . 517 KIF5C 3800 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 149633250 149633250 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KIF5C NM_004522 exon1 c.G64A p.E22K GAAGCGGAGATCC . 208.0 98.0 221.0 1.0 . 69 KLC2 64837 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 66030441 66030441 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KLC2 NM_022822 exon5 c.A686G p.E229G ACCTGGAGAAGAC . 66.0 10.0 86.0 0.0 . 90 KLHL1 57626 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 70535471 70535471 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KLHL1 NM_020866 exon3 c.T786C p.A262A CCAGAGAGCATTG . 77.0 29.0 92.0 0.0 . 90 KLHL28 54813 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 45414552 45414552 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KLHL28 NM_017658 exon2 c.A580T p.T194S CTTCGGTAGCTAC . 108.0 49.0 97.0 0.0 . 91 KLHL35 283212 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 75139660 75139660 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001039548 exon2 c.T893C p.L298P TCAGCTAGGTCCA . 31.0 17.0 37.0 0.0 . . KLHL38 340359 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 124664565 124664565 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KLHL38 NM_001081675 exon1 c.T602C p.M201T CAAACCATGAGGG . 80.0 36.0 88.0 0.0 . 68 KLRAP1 10748 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 10746500 10746500 + RNA SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KLRAP1 . . . . ATGATCTACAATG . 101.0 39.0 101.0 0.0 . 90 KNDC1 85442 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 10 135013094 135013094 + Nonsense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KNDC1 NM_152643 exon15 c.C2891G p.S964X AGGCGTCACCCTC . 30.0 23.0 69.0 0.0 . 229 KPNA5 3841 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 117047735 117047735 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KPNA5 NM_002269 exon12 c.A1203T p.A401A AGAAGCAGCTTGG . 134.0 63.0 216.0 0.0 . 290 KPTN 11133 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 47986778 47986778 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KPTN NM_007059 exon2 c.T290A p.V97E ATCCCCACAACCA . 80.0 27.0 110.0 0.0 . 91 KRBA1 84626 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 149420891 149420891 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRBA1 . . . . AGCTCCCCGAGGC . 102.0 45.0 153.0 0.0 . 91 KRT1 3848 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 53069400 53069400 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRT1 NM_006121 exon9 c.T1512G p.S504S GCTCACAGCTGCA . 66.0 36.0 88.0 1.0 . 92 KRT15 3866 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 39673060 39673060 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRT15 NM_002275 exon3 c.G738T p.E246D TCTCACCTCTTCG . 40.0 14.0 45.0 0.0 . 90 KRT24 192666 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 38855854 38855854 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRT24 NM_019016 exon6 c.A1203G p.S401S AATTTCTGACAGC . 73.0 29.0 68.0 0.0 . 90 KRT32 3882 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 39619248 39619248 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRT32 NM_002278 exon6 c.C1051G p.L351V GGGCCAGCTGGGA . 76.0 39.0 71.0 0.0 . 90 KRT3 3850 broad.mit.edu;ucsc.edu;mdanderson.org 37 12 53189820 53189820 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRT3 NM_057088 exon1 c.A7T p.R3X CTTGTCTGCTCAT . 19.0 6.0 33.0 0.0 . 90 KRT35 3886 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 39635633 39635633 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRT35 NM_002280 exon3 c.A677G p.E226G AGCTCCTCCTTCA . 104.0 44.0 89.0 1.0 . 92 KRT40 125115 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 39137242 39137242 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_182497 exon6 c.G849A p.Q283Q ACTGACCTGAACA . 103.0 48.0 85.0 0.0 . . KRT40 125115 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 39140425 39140425 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_182497 exon3 c.T101A p.L34H CCGGGGAGACAAG . 83.0 36.0 110.0 0.0 . . KRT6C 286887 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 52862953 52862953 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRT6C NM_173086 exon9 c.A1588T p.S530C CACTGCTGGAACT . 122.0 56.0 133.0 0.0 . 114 KRT72 140807 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 52979933 52979933 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRT72 NM_001146225 exon9 c.G1369T p.G457W CTGCCCCAGCATT . 51.0 24.0 58.0 0.0 . 96 KRT73 319101 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 53010081 53010081 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRT73 NM_175068 exon2 c.T531C p.N177N CAGGTTATTCTTG . 88.0 49.0 121.0 0.0 . 157 KRT77 374454 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 53086355 53086355 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRT77 NM_175078 exon7 c.A1277G p.Q426R AGCTTCTGCCACG . 43.0 21.0 43.0 0.0 . 187 KRT81 3887 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 12 52682242 52682242 + Splice_Site SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRT81 NM_002281 exon5 c.640-2A>G . ACATCCTGGAAAG . 84.0 39.0 88.0 0.0 . 90 KRT86 3892 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 52698804 52698804 + Missense_Mutation SNP A A G rs202150817 TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRT86 NM_002284 exon4 c.A728G p.Y243C GGCTGTATGAGGA . 57.0 24.0 77.0 0.0 A|0.999;G|0.000 91 KRT9 3857 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 39728014 39728014 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRT9 NM_000226 exon1 c.T231C p.S77S ACCCCCAGATCCT . 151.0 52.0 162.0 0.0 . 92 KRTAP10-4 386672 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 45994365 45994365 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRTAP10-4 NM_198687 exon1 c.T730C p.S244P GTGTGCTCTGAGG . 34.0 14.0 33.0 0.0 . 90 KRTAP11-1 337880 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 32253723 32253723 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KRTAP11-1 NM_175858 exon1 c.T121G p.C41G GCAAACAGATGCC . 109.0 45.0 113.0 0.0 . 91 KRTAP12-2 353323 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 46086475 46086475 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_181684 exon1 c.G329T p.C110F GGCCTGCAGCTCA . 68.0 23.0 88.0 0.0 . . KRTAP16-1 100505753 hgsc.bcm.edu;bcgsc.ca;mdanderson.org 37 17 39464596 39464596 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001146182 exon1 c.T910A p.C304S AGACACAACAAGA . 60.0 24.0 68.0 0.0 . . KRTAP16-1 100505753 hgsc.bcm.edu;bcgsc.ca;mdanderson.org 37 17 39465344 39465344 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001146182 exon1 c.T162G p.C54W TGGCCCACAGCTG . 191.0 84.0 168.0 0.0 . . KRTAP5-4 387267 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 1642911 1642911 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001012709 exon1 c.A413G p.Q138R CTGCACTGGGAGC . 39.0 31.0 111.0 0.0 . . KRTAP9-1 728318 bcgsc.ca;mdanderson.org 37 17 39346262 39346262 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_1 WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001190460 exon1 c.T124G p.C42G CCCTCCTGCTGTG . 27.0 13.0 38.0 0.0 . . KRTAP9-9 81870 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 39411764 39411764 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_030975 exon1 c.T127A p.C43S AGCTGCTGCCAGC . 37.0 18.0 49.0 0.0 . . KSR2 283455 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 118298200 118298200 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . KSR2 NM_173598 exon2 c.T130C p.C44R TTTTGCAGGACAG . 34.0 17.0 43.0 0.0 . 1449 LAMA2 3908 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 129498936 129498936 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LAMA2 NM_000426 exon10 c.G1392T p.P464P CTACCCGGACTGC . 110.0 47.0 149.0 0.0 . 162 LAMA2 3908 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 129618940 129618940 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LAMA2 NM_000426 exon21 c.T2967A p.P989P CCAACCTGGAGTC . 50.0 26.0 83.0 0.0 . 162 LAMA2 3908 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 129636779 129636779 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LAMA2 NM_000426 exon25 c.A3714T p.P1238P ACTTCCAGAACAA . 73.0 30.0 89.0 0.0 . 162 LAMA2 3908 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 129823895 129823895 + Missense_Mutation SNP A A T rs202202014 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LAMA2 NM_000426 exon59 c.A8336T p.D2779V CATTTGATGACAC . 75.0 30.0 98.0 0.0 A|0.999;G|0.000 162 LAMC1 3915 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 183102629 183102629 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LAMC1 NM_002293 exon22 c.G3793T p.V1265L AAAGCTGTGGAGA . 165.0 44.0 86.0 0.0 . 252 LCA5 167691 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 80223068 80223068 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LCA5 NM_001122769 exon3 c.G581T p.S194I AGTTCACTTTCTG . 148.0 64.0 187.0 0.0 . 90 LCE2D 353141 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 152636872 152636872 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LCE2D NM_178430 exon2 c.T291C p.S97S ACCTTCTGGGGCC . 137.0 24.0 73.0 0.0 . 68 LCK 3932 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 32742349 32742349 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LCK NM_005356 exon9 c.A926T p.Q309L TCACCCAGGAGCC . 45.0 31.0 60.0 0.0 . 1378 LDLRAD2 401944 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 22141096 22141096 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LDLRAD2 NM_001013693 exon2 c.C291A p.N97K GCTCAACACCTCC . 90.0 47.0 74.0 0.0 . 90 LDLRAD3 143458 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 36057758 36057758 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LDLRAD3 NM_174902 exon2 c.G152T p.G51V GTGACGGGCTGCC . 44.0 21.0 54.0 0.0 . 90 LEKR1 389170 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 156742645 156742645 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LEKR1 NM_001004316 exon11 c.A1300G p.I434V CTTGATATTGAAA . 373.0 132.0 398.0 2.0 . 68 LEPREL1 55214 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 189691795 189691795 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LEPREL1 NM_001134418 exon11 c.910-2A>T . ATTCCCTGGAAGC . 91.0 42.0 120.0 0.0 . 155 LGR6 59352 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 202287908 202287908 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LGR6 NM_001017403 exon18 c.T2477A p.L826Q CACTGCTGTACCT . 16.0 15.0 50.0 0.0 . 160 LHCGR 3973 broad.mit.edu;ucsc.edu;mdanderson.org 37 2 48925836 48925836 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LHCGR NM_000233 exon9 c.A784T p.R262X TTTCTCTTGATGG . 58.0 23.0 65.0 1.0 . 589 LHX2 9355 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 9 126794984 126794984 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LHX2 NM_004789 exon5 c.T1219C p.X407Q CTTTTCTAATGAC . 72.0 57.0 157.0 0.0 . 90 LIM2 3982 broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 51885739 51885739 + Missense_Mutation SNP G G T rs201810597 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LIM2 NM_030657 exon3 c.C384A p.F128L ATGAGCGAAGGCC . 37.0 16.0 63.0 0.0 G|0.999;A|0.000 90 LIN28A 79727 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 26751824 26751824 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LIN28A NM_024674 exon3 c.T259A p.L87M CGGAGCTTGAAGG . 153.0 54.0 171.0 2.0 . 226 LINC00152 112597 broad.mit.edu;mdanderson.org 37 2 87820742 87820742 + RNA SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . . AGATGAAACAGGA . 248.0 109.0 276.0 0.0 . . LMAN1L 79748 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 15 75111520 75111520 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LMAN1L NM_021819 exon6 c.A625T p.S209C ACTCCCAGTGATC . 56.0 20.0 69.0 0.0 . 90 LPAR3 23566 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 85331282 85331282 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LPAR3 NM_012152 exon2 c.T522G p.S174S GCAGGCAGAGATG . 98.0 39.0 99.0 0.0 . 502 LPHN3 23284 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 62758609 62758609 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LPHN3 NM_015236 exon7 c.A1512T p.R504R AGCCCGAGAAATC . 59.0 26.0 99.0 0.0 . 508 LPIN3 64900 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 39978721 39978721 + Silent SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LPIN3 NM_022896 exon7 c.C786G p.S262S CGAGTCCTCAGTG . 81.0 29.0 82.0 0.0 . 93 LPPR4 0 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 99771914 99771914 + Frame_Shift_Del DEL C C - novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LPPR4 NM_014839 exon7 c.1640delC p.S547fs GCACCTCCCCCAA . 69.0 36.0 101.0 0.0 . 93 LRCH1 23143 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 47302989 47302989 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LRCH1 NM_001164211 exon18 c.A1877G p.E626G GCATTGAGATGAG . 58.0 23.0 81.0 0.0 . 91 LRIT1 26103 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 85991913 85991913 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LRIT1 NM_015613 exon4 c.T1642A p.C548S TGCAGCAGACAAG . 95.0 36.0 88.0 0.0 . 90 LRP1B 53353 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 141528495 141528495 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LRP1B NM_018557 exon34 c.T5581A p.C1861S CTGTACACATACA . 66.0 18.0 96.0 0.0 . 311 LRP2 4036 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 170063518 170063518 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LRP2 NM_004525 exon39 c.G6712A p.G2238S CCAAGCCCCGTGG . 150.0 65.0 152.0 0.0 . 175 LRP2 4036 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 170097673 170097673 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LRP2 NM_004525 exon25 c.T3870C p.C1290C CCGATCACAGAGC . 99.0 48.0 94.0 0.0 . 175 LRRC10 376132 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 70004105 70004105 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LRRC10 NM_201550 exon1 c.A514G p.I172V GCCAGATGGTCCT . 48.0 21.0 44.0 0.0 . 514 LRRC36 55282 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 67375858 67375858 + Splice_Site SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LRRC36 NM_018296 exon2 c.71-2A>C . CTTTTCAGAACTG . 34.0 30.0 68.0 0.0 . 90 LRRC40 55631 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 70616864 70616864 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LRRC40 NM_017768 exon13 c.A1464C p.P488P TTCTTCTGGCAAA . 240.0 97.0 244.0 0.0 . 91 LRRC4 64101 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 127670231 127670231 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LRRC4 NM_022143 exon2 c.C463T p.R155C TGTTGCGAAGCCA . 41.0 17.0 61.0 0.0 . 154 LRRC57 255252 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 42839595 42839595 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LRRC57 NM_153260 exon4 c.A356T p.Q119L CCCAGTTGGTTCC . 80.0 42.0 89.0 0.0 . 90 LRRC7 57554 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 70502271 70502271 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LRRC7 NM_020794 exon18 c.C2138T p.A713V CAACAGCTAAAGA . 132.0 61.0 115.0 1.0 . 163 LRRD1 401387 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 91792827 91792827 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001161528 exon1 c.T1690G p.C564G TACAGCATAAAAT . 177.0 79.0 200.0 0.0 . . LRRD1 401387 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 7 91794336 91794336 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001161528 exon1 c.A181T p.R61X TCTGTCTAGGATG . 76.0 31.0 91.0 0.0 . . LRRIQ4 344657 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 169539921 169539921 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001080460 exon1 c.A212G p.K71R GTTTAAAGAACAT . 112.0 45.0 107.0 0.0 . . LRRK1 79705 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 15 101605833 101605833 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LRRK1 NM_024652 exon32 c.A5191G p.M1731V CCCTACATGGCCC . 55.0 27.0 71.0 0.0 . 602 LRRK1 79705 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 101598240 101598240 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LRRK1 NM_024652 exon29 c.T4573A p.F1525I CCGACTTTTGCCA . 55.0 24.0 80.0 0.0 . 602 LRRTM1 347730 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 80529619 80529619 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd LRRTM1,NS,carcinoma,0 LRRTM1 NM_178839 exon2 c.G1326T p.V442V CAGGACCACGATG . 27.0 10.0 37.0 0.0 . 73 LTBP2 4053 broad.mit.edu;bcgsc.ca;mdanderson.org 37 14 75078477 75078477 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LTBP2 NM_000428 exon1 c.G171A p.G57G GCTGCCCCCAGGG . 23.0 7.0 22.0 0.0 . 92 LTBP2 4053 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 75019087 75019087 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LTBP2 NM_000428 exon6 c.A1202T p.Q401L GGGATCTGGCAGA . 23.0 12.0 26.0 0.0 . 92 LUM 4060 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 91502590 91502590 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LUM NM_002345 exon2 c.T167A p.L56Q AATTTCAGCTCAT . 59.0 24.0 82.0 0.0 . 514 LY9 4063 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 160783584 160783584 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LY9 NM_001261457 exon3 c.T613C p.S205P GGAGGCTCCATTC . 413.0 143.0 205.0 1.0 . 91 LY9 4063 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 160784286 160784286 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LY9 NM_001261457 exon4 c.T807G p.L269L GCCACTTGCACTC . 190.0 138.0 122.0 0.0 . 91 LYPD3 27076 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 43969695 43969695 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LYPD3 NM_014400 exon1 c.A29T p.Q10L ATGGCCTGGGCAC . 27.0 8.0 25.0 0.0 . 91 LYPD4 147719 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 42342129 42342129 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LYPD4 NM_173506 exon4 c.T418G p.C140G AGCTACAGGACGC . 97.0 45.0 117.0 0.0 . 91 LZTS1 11178 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 20110758 20110758 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . LZTS1 NM_021020 exon2 c.G684A p.K228K CAGAGCCTTCAGG . 15.0 13.0 46.0 1.0 . 91 MACC1 346389 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 20193914 20193914 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MACC1 NM_182762 exon6 c.T2248A p.W750R CCCTCCAGCCTTT . 98.0 46.0 94.0 0.0 . 93 MAGEC2 51438 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 141291576 141291576 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MAGEC2 NM_016249 exon3 c.T198A p.P66P CTCCTCAGGACCA . 37.0 34.0 44.0 0.0 . 193 MAP1B 4131 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 71494454 71494454 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MAP1B NM_005909 exon5 c.G5272C p.D1758H CCCAGAGATATGT . 49.0 18.0 63.0 0.0 . 155 MAP2K2 5605 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 4117490 4117490 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MAP2K2 NM_030662 exon2 c.A230G p.E77G CCCAGCTCTGAGA . 55.0 16.0 70.0 0.0 . 510 MAP3K4 4216 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 161523729 161523729 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MAP3K4 NM_006724 exon18 c.3626-2A>T . TCCTGCAGAACCA . 307.0 149.0 396.0 0.0 . 548 MAPK7 5598 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 19286534 19286534 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MAPK7 NM_002749 exon7 c.A2441T p.Q814L ACCTCCAGGACCC . 36.0 17.0 61.0 0.0 . 1402 MARCH4 57574 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 217124264 217124264 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MARCH4 NM_020814 exon4 c.G1004T p.R335L GAGGTCCGGGGGT . 89.0 34.0 114.0 0.0 . 69 MBOAT1 154141 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 20124804 20124804 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MBOAT1 NM_001080480 exon8 c.A742T p.T248S CCAAGGTGATGCC . 184.0 72.0 171.0 2.0 . 68 MCAM 4162 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 119185904 119185904 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MCAM NM_006500 exon2 c.T137G p.L46R CACTTCAGAAGGG . 19.0 10.0 36.0 0.0 . 137 MCFD2 90411 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 47134956 47134956 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MCFD2 NM_001171506 exon4 c.A302G p.H101R TCCTTATGGACAT . 36.0 18.0 46.0 0.0 . 90 MCM10 55388 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 13217598 13217598 + Missense_Mutation SNP A A T rs138161730 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MCM10 NM_182751 exon6 c.A684T p.R228S AACTAGAGGTCAA . 136.0 65.0 150.0 0.0 A|0.999;G|0.000 653 MCM3 4172 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 6 52129386 52129386 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MCM3 NM_002388 exon17 c.A2562T p.X854C GCCTCCTCAGATG . 56.0 28.0 66.0 0.0 . 228 MCM3AP 8888 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 47686993 47686993 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MCM3AP NM_003906 exon10 c.A2692T p.I898F GAAAGATGGTAGA . 44.0 36.0 101.0 1.0 . 291 MCTP2 55784 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 94913364 94913364 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MCTP2 NM_001159643 exon11 c.G1537A p.V513M CTACAAGTGAAGG . 106.0 20.0 119.0 0.0 . 93 MDC1 9656 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 30671686 30671686 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MDC1 NM_014641 exon10 c.G5274T p.W1758C TGCTCCCCATCTT . 65.0 24.0 80.0 1.0 . 273 MDN1 23195 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 90371171 90371171 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MDN1 NM_014611 exon88 c.A14692G p.T4898A TGTCGGTGTCCTC . 103.0 39.0 130.0 0.0 . 100 MDN1 23195 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 6 90371808 90371808 + Nonsense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MDN1 NM_014611 exon87 c.G14563T p.E4855X TTACCTCATCTAT . 64.0 29.0 60.0 0.0 . 100 MEGF11 84465 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 66222097 66222097 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MEGF11 NM_032445 exon12 c.T1533A p.T511T GCCAGGAGTGCAG . 98.0 36.0 105.0 0.0 . 69 MEP1A 4224 hgsc.bcm.edu;ucsc.edu;mdanderson.org 37 6 46801092 46801092 + Nonsense_Mutation SNP A A T rs12197930 byfrequency;alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MEP1A NM_005588 exon11 c.A1426T p.R476X AATAGCAGAGAAA . 37.0 15.0 55.0 0.0 A|0.957;G|0.043 183 METAP2 10988 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 95905678 95905678 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . METAP2 NM_006838 exon9 c.A972C p.P324P GAAACCAATCCGT . 55.0 17.0 69.0 0.0 . 90 METTL13 51603 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 171759656 171759656 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . METTL13 NM_015935 exon5 c.A1374T p.A458A CCCTGCAGCCCCG . 500.0 336.0 319.0 0.0 . 91 METTL21C 196541 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 103343193 103343193 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . METTL21C NM_001010977 exon2 c.A252G p.I84M ACTCTCTATGGAT . 125.0 114.0 105.0 0.0 . 90 MEX3B 84206 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 82336831 82336831 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MEX3B NM_032246 exon2 c.T380C p.I127T GAGATGATCTCCC . 31.0 14.0 34.0 0.0 . 226 MFSD6L 162387 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 8700730 8700730 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MFSD6L NM_152599 exon1 c.G1709A p.G570E TCTGTCCCCTGCT . 28.0 27.0 45.0 0.0 . 90 MGAT4C 25834 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 86373569 86373569 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MGAT4C NM_013244 exon7 c.T935A p.M312K TAGCCCATGTGCT . 68.0 24.0 81.0 0.0 . 93 MIB1 57534 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 19345790 19345790 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MIB1 NM_020774 exon2 c.T287A p.I96N TTGGCATTCGATG . 49.0 32.0 59.0 0.0 . 526 MICALL1 85377 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 22 38318312 38318312 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MICALL1 NM_033386 exon6 c.C903A p.P301P CCGCCCCACCCCT . 23.0 12.0 20.0 0.0 . 153 MIIP 60672 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 12082339 12082339 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MIIP NM_021933 exon3 c.A302T p.Q101L AATGCCAGCACCA . 86.0 51.0 128.0 0.0 . 91 MILR1 284021 broad.mit.edu;ucsc.edu;mdanderson.org 37 17 62462756 62462756 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . . TGTTCCAGGAGGT . 89.0 41.0 85.0 2.0 . . MIOS 54468 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 7612424 7612424 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MIOS NM_019005 exon4 c.A318G p.K106K AGGAAAAGAGTTT . 89.0 36.0 87.0 0.0 . 90 MIR517A 574479 broad.mit.edu;ucsc.edu;mdanderson.org 37 19 54215574 54215574 + RNA SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . . AGAAAAGATCGTG . 56.0 25.0 68.0 0.0 . . MKL2 57496 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 14340581 14340581 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MKL2 NM_014048 exon12 c.A1464T p.T488T ACCTACAGGAACC . 68.0 36.0 83.0 0.0 . 95 MLH3 27030 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 75516322 75516322 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MLH3 NM_014381 exon2 c.T37C p.L13L AACGCAATTTGGC . 64.0 36.0 79.0 0.0 . 228 MLL2 8085 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 49420043 49420043 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MLL2 NM_003482 exon48 c.A15706C p.N5236H GCCCGTTGTTCTC . 94.0 45.0 98.0 0.0 . 612 MLL4 8085 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 36221017 36221017 + Silent SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MLL4 NM_014727 exon23 c.G5067C p.L1689L TCTCCTGGATGGC . 113.0 55.0 157.0 0.0 . 697 MLLT3 4300 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 20413886 20413886 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MLLT3 NM_004529 exon5 c.T958A p.C320S CAGAACAAGTGAG . 103.0 47.0 126.0 0.0 . 660 MME 4311 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 154889935 154889935 + Silent SNP C C A rs201494121 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MME NM_007287 exon21 c.C2010A p.G670G GAATGGCGAAGAA . 358.0 166.0 370.0 1.0 . 516 MMP10 4319 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 102642848 102642848 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MMP10 NM_002425 exon10 c.1227-2A>T . CAAATCTAAACCA . 53.0 17.0 55.0 0.0 . 713 MMP12 4321 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 102742328 102742328 + RNA SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MMP12 . . . . ACCTCCTGAATGT . 54.0 25.0 78.0 0.0 . 226 MMP14 4323 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 23312529 23312529 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MMP14 NM_004995 exon5 c.G752T p.S251I ATTCCAGTGACCC . 44.0 15.0 53.0 0.0 . 226 MMP16 4325 broad.mit.edu;bcgsc.ca 37 8 89068495 89068495 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MMP16 NM_005941 exon8 c.T1234C p.W412R ACACCCAATATTT . 99.0 7.0 103.0 0.0 . 231 MMP24 10893 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 33839777 33839777 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_006690 exon3 c.C465A p.R155R CAAGCGCTATGCC . 67.0 33.0 87.0 0.0 . . MMP7 4316 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 102394039 102394039 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MMP7 NM_002423 exon5 c.A707T p.Y236F TTTCCATAGGTTG . 77.0 20.0 95.0 0.0 . 651 MOG 4340 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 29627246 29627246 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MOG NM_001008229 exon2 c.A239T p.Y80F ATCTCTACAGAAA . 131.0 62.0 147.0 2.0 . 515 MORC2 22880 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 31333654 31333654 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MORC2 NM_014941 exon16 c.T1228C p.S410P TGGCAGAGAGGTA . 44.0 19.0 38.0 0.0 . 92 MOS 4342 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 57026368 57026368 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MOS NM_005372 exon1 c.G174T p.E58D CACCTGCTCCCAG . 52.0 28.0 66.0 0.0 . 1403 MOV10L1 54456 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 22 50599429 50599429 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MOV10L1 NM_018995 exon26 c.A3499G p.T1167A AGTATTACAAACG . 115.0 41.0 147.0 0.0 . 93 MPHOSPH8 54737 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 20220900 20220900 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MPHOSPH8 NM_017520 exon3 c.A687T p.K229N AAAGAAAGTTAAA . 152.0 57.0 169.0 0.0 . 68 MPO 4353 broad.mit.edu;ucsc.edu;mdanderson.org 37 17 56357776 56357776 + Nonsense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MPO NM_000250 exon2 c.G199T p.E67X CCTCCTCCATGGA . 165.0 75.0 191.0 1.0 . 156 MRC2 9902 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 17 60744225 60744225 + Nonsense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MRC2 NM_006039 exon5 c.G967T p.E323X AACTGGGAGAGTG . 79.0 37.0 98.0 0.0 . 117 MRGPRE 116534 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 3249418 3249418 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MRGPRE NM_001039165 exon2 c.G612T p.E204D GCCTCGCTCCACC . 17.0 15.0 42.0 0.0 . 136 MROH7 374977 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 55174688 55174688 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001039464 exon23 c.G3669A p.G1223G TCAAGGGTCCCTG . 46.0 28.0 76.0 0.0 . . MROH7 374977 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 1 55119680 55119680 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001039464 exon3 c.A1081T p.K361X GATGCCAAGGACA . 95.0 53.0 121.0 0.0 . . MROH8 140699 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 35802476 35802476 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . . AATCACTGTCATA . 61.0 25.0 49.0 0.0 . . MRPL30 51263 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 99812077 99812077 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MRPL30 NM_145212 exon6 c.A395G p.E132G CAGAGGAGAACAT . 127.0 59.0 142.0 0.0 . 91 MST1R 4486 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 49924915 49924915 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MST1R NM_002447 exon20 c.A4028T p.Q1343L ACTATCTGCTCCA . 90.0 38.0 123.0 0.0 . 1406 MTF1 4520 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 38288109 38288109 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MTF1 NM_005955 exon9 c.A1451G p.E484G AGAAACTCTTGAT . 55.0 28.0 81.0 0.0 . 92 MTHFD1 4522 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 64886605 64886605 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MTHFD1 NM_005956 exon8 c.G689T p.G230V AACCTGGGGCAAT . 87.0 47.0 106.0 0.0 . 92 MTIF2 4528 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 55479663 55479663 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MTIF2 NM_002453 exon8 c.G791T p.G264V ATCACTCCATCAT . 171.0 85.0 143.0 0.0 . 91 MTMR1 8776 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 149867740 149867740 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MTMR1 NM_003828 exon2 c.A219G p.S73S AGGTTCAGTGACA . 32.0 30.0 45.0 0.0 . 131 MTMR8 55613 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 63490847 63490847 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MTMR8 NM_017677 exon13 c.G1588C p.D530H GCACATCTGTCTC . 91.0 86.0 120.0 0.0 . 195 MTRR 4552 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 7878172 7878172 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MTRR NM_024010 exon5 c.G598T p.A200S TCACCTGCATCCT . 38.0 20.0 71.0 0.0 . 91 MUC16 94025 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 9062263 9062263 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MUC16 NM_024690 exon3 c.A25183G p.I8395V TGGATATGGAAAC . 54.0 30.0 52.0 0.0 . 566 MUC16 94025 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 9067175 9067175 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MUC16 NM_024690 exon3 c.T20271A p.T6757T GGATGTAGTTGGT . 58.0 27.0 84.0 0.0 . 566 MUC16 94025 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 9067507 9067507 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MUC16 NM_024690 exon3 c.A19939G p.I6647V TCTCAATCCTTGT . 90.0 42.0 96.0 0.0 . 566 MUC16 94025 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 9069194 9069194 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MUC16 NM_024690 exon3 c.C18252T p.A6084A CACCAGGGCGGTG . 111.0 56.0 111.0 0.0 . 566 MUC16 94025 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 9071260 9071260 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MUC16 NM_024690 exon3 c.A16186T p.S5396C TGCTGCTCAAATT . 96.0 42.0 100.0 0.0 . 566 MUC16 94025 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 9077042 9077042 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MUC16 NM_024690 exon3 c.C10404A p.D3468E GCCTTGGTCTCCA . 47.0 27.0 55.0 0.0 . 566 MUC17 140453 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 100674961 100674961 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MUC17 NM_001040105 exon3 c.C264A p.N88K CACCAACCCTGAG . 113.0 61.0 116.0 0.0 . 95 MUC17 140453 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 100685847 100685847 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MUC17 NM_001040105 exon3 c.C11150A p.P3717H CAACACCTTCTGT . 29.0 12.0 32.0 0.0 . 95 MUC21 394263 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 30955029 30955029 + Silent SNP A A T rs41288693 TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MUC21 NM_001010909 exon2 c.A1077T p.T359T CAGCACAGCCACC . 35.0 13.0 29.0 0.0 . 92 MUC2 4583 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 1083817 1083817 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MUC2 NM_002457 exon18 c.C2349A p.S783R CCTCAGCTGCCAG . 22.0 20.0 72.0 0.0 . 90 MUC4 4585 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 3 195511219 195511219 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MUC4 NM_018406 exon2 c.C7232T p.T2411I TGACCTGTGGATG . 319.0 40.0 339.0 0.0 . 90 MUC5B 727897 broad.mit.edu;bcgsc.ca 37 11 1261069 1261069 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_002458 exon28 c.T3624C p.N1208N CTTCAATGAGGAC . 22.0 21.0 43.0 1.0 . . MYBPC3 4607 broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 47372124 47372124 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYBPC3 NM_000256 exon3 c.A335T p.E112V GTGGCCTCAGCAG . 188.0 78.0 251.0 1.0 . 92 MYCBP2 23077 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 77844588 77844588 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYCBP2 NM_015057 exon6 c.G1031A p.G344D TTAATGCCATTAC . 148.0 62.0 155.0 0.0 . 236 MYCBPAP 84073 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 17 48597032 48597032 + Missense_Mutation SNP T T A rs183786523 by1000genomes;alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYCBPAP NM_032133 exon7 c.T929A p.L310Q GTCGACTGGAATA . 82.0 45.0 109.0 0.0 T|1.000;C|0.000 230 MYCT1 80177 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 153043211 153043211 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYCT1 NM_025107 exon2 c.T531A p.P177P ACTTCCTGTGGAA . 77.0 32.0 85.0 0.0 . 91 MYH1 4619 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 17 10416941 10416941 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYH1 NM_005963 exon10 c.805+2T>A . TTACTCACATGTT . 44.0 39.0 106.0 0.0 . 171 MYH15 22989 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 108147647 108147647 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYH15 NM_014981 exon28 c.A3454C p.T1152P CTTGGGTGAGGTC . 107.0 48.0 139.0 1.0 . 73 MYH15 22989 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 108149731 108149731 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYH15 NM_014981 exon27 c.A3320G p.E1107G TCATTCTCCACTT . 44.0 14.0 52.0 0.0 . 73 MYH2 4620 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 10432930 10432930 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYH2 NM_017534 exon24 c.T3068C p.V1023A GTGTTGACTTTGT . 52.0 40.0 128.0 0.0 . 194 MYH6 4624 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 23858850 23858850 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYH6 NM_002471 exon27 c.T3811A p.S1271T TGAGGGAGCGTTG . 126.0 55.0 139.0 0.0 . 94 MYH7 4625 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 23892879 23892879 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYH7 NM_000257 exon24 c.G2976T p.L992L CTTGGTCAGCTTG . 91.0 39.0 102.0 0.0 . 94 MYH7 4625 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 23900689 23900689 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYH7 NM_000257 exon9 c.G734T p.G245V AATTTCCCCTGGA . 67.0 27.0 70.0 0.0 . 94 MYH9 4627 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 22 36684453 36684453 + Nonsense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYH9 NM_002473 exon34 c.G4777T p.E1593X CCATCTCCCGCAC . 26.0 11.0 25.0 0.0 . 292 MYO10 4651 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 16711259 16711259 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYO10 NM_012334 exon20 c.C2025A p.V675V TCTTCGGACCGCA . 104.0 60.0 180.0 0.0 . 3 MYO18B 84700 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 26176138 26176138 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYO18B NM_032608 exon9 c.A2184C p.T728T CGCTACAGGCCGC . 28.0 10.0 27.0 0.0 . 142 MYO18B 84700 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 26423048 26423048 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYO18B NM_032608 exon43 c.A7108T p.T2370S CCGACCACACCCA . 56.0 25.0 56.0 0.0 . 142 MYO1G 64005 broad.mit.edu;mdanderson.org 37 7 45002572 45002572 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYO1G NM_033054 exon21 c.A2897T p.Q966L CACCCCTGGCAGT . 13.0 6.0 8.0 0.0 . 137 MYO3A 53904 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 26463109 26463109 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYO3A NM_017433 exon30 c.A3916G p.K1306E GAAAAGAAGACAT . 174.0 85.0 170.0 0.0 . 1007 MYO3B 140469 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 171243724 171243724 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYO3B NM_001083615 exon14 c.T1483C p.Y495H GGAAAATATCTGG . 99.0 52.0 102.0 0.0 . 530 MYO3B 140469 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 171260905 171260905 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYO3B NM_001083615 exon20 c.T2426A p.L809Q AGACCCTGGTTGG . 100.0 46.0 120.0 0.0 . 530 MYO6 4646 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 76576647 76576647 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYO6 NM_004999 exon18 c.1771-2A>T . TTTTTCAGACCCA . 64.0 35.0 63.0 0.0 . 92 MYO7A 4647 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 11 76903162 76903162 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYO7A NM_000260 exon31 c.A3991T p.K1331X TACGCCAAGGAGC . 110.0 57.0 128.0 0.0 . 138 MYOC 4653 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 1 171605647 171605647 + Nonsense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . MYOC NM_000261 exon3 c.C933G p.Y311X AGAAGGGTAGCCC . 138.0 22.0 71.0 0.0 . 226 NAA38 51691 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 117828430 117828430 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NAA38 NM_016200 exon3 c.A171T p.L57L GGTACTAGGATTA . 62.0 24.0 67.0 0.0 . 90 NAALAD2 10003 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 89907042 89907042 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NAALAD2 NM_005467 exon14 c.G1461T p.W487C AAGCTGGTTGGAA . 103.0 46.0 103.0 0.0 . 92 NABP2 79035 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 56619992 56619992 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_024068 exon5 c.A320T p.N107I TTCCTAACTTCAG . 116.0 58.0 152.0 0.0 . . NANOGNB 360030 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 7923072 7923072 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001145465 exon3 c.A473G p.N158S AATATAATAAAGA . 71.0 33.0 75.0 0.0 . . NAPSA 9476 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 50861904 50861904 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NAPSA NM_004851 exon9 c.T1169G p.M390R CTCTTCATGTCCC . 68.0 30.0 108.0 0.0 . 90 NBAS 51594 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 15679482 15679482 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NBAS NM_015909 exon8 c.380-2A>T . CGGAACTAGAACA . 104.0 39.0 112.0 0.0 . 94 NBEA 26960 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 35731383 35731383 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NBEA NM_015678 exon21 c.T2820C p.D940D GGTGGATACCCTC . 61.0 19.0 58.0 0.0 . 144 NBN 4683 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 90995076 90995076 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NBN NM_002485 exon2 c.A45G p.P15P TCTGTATGGTTCT . 89.0 41.0 114.0 0.0 . 1395 NBR1 4077 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 41341610 41341610 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NBR1 NM_031862 exon8 c.A486T p.R162S GTTCAGAGAACAA . 99.0 49.0 115.0 0.0 . 130 NBR1 4077 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 41352594 41352594 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NBR1 NM_031862 exon17 c.G2437C p.E813Q ATCCCAGAGGTAG . 180.0 75.0 207.0 0.0 . 130 NCAM2 4685 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 22782650 22782650 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NCAM2 NM_004540 exon10 c.A1252G p.I418V AATCCTATCAATA . 322.0 144.0 353.0 0.0 . 94 NCAPG 64151 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 17814020 17814020 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NCAPG NM_022346 exon2 c.A288C p.L96F CCTTTTAAATTAT . 47.0 20.0 70.0 0.0 . 153 NCOA4 8031 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 51585413 51585413 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NCOA4 NM_001145261 exon9 c.A1560G p.K520K ATACAAAGAAGGA . 82.0 41.0 70.0 0.0 . 1042 NCOR2 9612 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 124886995 124886995 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NCOR2 NM_006312 exon16 c.A1595T p.E532V TCCTCCTCCTTCT . 56.0 26.0 70.0 0.0 . 229 NDST2 8509 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 75567441 75567441 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NDST2 NM_003635 exon3 c.A706G p.T236A CATATGTACTATG . 53.0 19.0 91.0 0.0 . 91 NDST3 9348 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 119174753 119174753 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NDST3 NM_004784 exon13 c.T2499A p.S833S GGATTCTGATGTA . 271.0 103.0 318.0 0.0 . 153 NDST4 64579 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 115858495 115858495 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NDST4 NM_022569 exon5 c.C1386T p.G462G AATGAAGCCCTTT . 90.0 37.0 93.0 0.0 . 94 NDST4 64579 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 115997739 115997739 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NDST4 NM_022569 exon2 c.A454G p.K152E AGTATTTTTCTAA . 104.0 37.0 113.0 0.0 . 94 NDUFAF4 29078 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 6 97339048 97339048 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NDUFAF4 NM_014165 exon3 c.A460T p.K154X AATATTTAAGAAG . 48.0 15.0 59.0 0.0 . 91 NEB 4703 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 152466569 152466569 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NEB NM_001271208 exon81 c.T12084C p.D4028D GGGATCATCTTCA . 64.0 26.0 78.0 0.0 . 145 NECAB3 63941 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 32247787 32247787 + Missense_Mutation SNP C C T rs200489455 TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NECAB3 NM_031232 exon7 c.G547A p.A183T TCTGCGCCTCCAC . 31.0 11.0 26.0 0.0 C|0.997;T|0.003 91 NEK5 341676 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 52676261 52676261 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NEK5 NM_199289 exon10 c.A777C p.L259F ATTCTCTAAAAAG . 233.0 102.0 230.0 0.0 . 334 NEK7 140609 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 198233311 198233311 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NEK7 NM_133494 exon5 c.A318G p.E106E TAATGAACTAAAC . 194.0 158.0 362.0 0.0 . 358 NELL2 4753 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 45105173 45105173 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NELL2 NM_001145107 exon12 c.A1241T p.Q414L ATGGTCTGGTCCT . 83.0 23.0 75.0 0.0 . 517 NEMF 9147 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 50318359 50318359 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NEMF NM_004713 exon3 c.A153G p.L51L TTCAAGTAAAAGT . 63.0 26.0 53.0 0.0 . 90 NEO1 4756 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 73541516 73541516 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NEO1 NM_001172623 exon10 c.G1722A p.L574L TAAATTGTACTAC . 51.0 12.0 75.0 0.0 . 116 NEUROD1 4760 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 182543118 182543118 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NEUROD1 NM_002500 exon2 c.T470C p.L157P GAGCGCAGGATCT . 63.0 29.0 62.0 0.0 . 91 NEUROD4 58158 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 55421151 55421151 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NEUROD4 NM_021191 exon2 c.G928T p.D310Y CCTATAGACATGT . 79.0 37.0 85.0 0.0 . 94 NFATC4 4776 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 24841727 24841727 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NFATC4 NM_001198967 exon4 c.G1466T p.R489I AGCCTAGAGCCCA . 56.0 32.0 47.0 0.0 . 92 NFATC4 4776 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 24843545 24843545 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NFATC4 NM_001198967 exon7 c.C1935A p.A645A CTCAGCCCAGGAG . 44.0 21.0 45.0 0.0 . 92 NFIX 4784 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 13136064 13136064 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NFIX NM_001271043 exon2 c.A281T p.E94V GGCCCGAGTTCCG . 61.0 28.0 66.0 0.0 . 272 NGF 4803 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 115829387 115829387 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NGF NM_002506 exon3 c.A30T p.T10T AAAAGCTGTGATC . 63.0 31.0 85.0 0.0 . 1083 NHLH2 4808 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 116380638 116380638 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NHLH2 NM_001111061 exon2 c.T356A p.L119Q AGGCGCAGGATCT . 50.0 19.0 46.0 0.0 . 90 NHLRC4 283948 broad.mit.edu;mdanderson.org 37 16 618166 618166 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_176677 exon2 c.T119C p.L40P GCTCCCTGGGGGG . 41.0 16.0 44.0 2.0 . . NID2 22795 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 52481921 52481921 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NID2 NM_007361 exon15 c.C3101G p.P1034R TCCCGGGGGGTGC . 119.0 58.0 127.0 0.0 . 158 NKX2-2 4821 broad.mit.edu;bcgsc.ca;mdanderson.org 37 20 21492594 21492594 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NKX2-2 NM_002509 exon2 c.C789A p.H263Q CAGGGGGTGTGCT . 19.0 9.0 21.0 0.0 . 92 NKX2-8 26257 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 14 37051488 37051488 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NKX2-8 NM_014360 exon1 c.A107T p.Q36L TCGGGCTGGGGGG . 73.0 31.0 102.0 0.0 . 226 NLE1 54475 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 33462285 33462285 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NLE1 NM_018096 exon10 c.G1197T p.W399C GCCATCCCACAGC . 90.0 46.0 108.0 0.0 . 290 NLGN4X 57502 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 5810965 5810965 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NLGN4X NM_181332 exon6 c.A2344T p.I782F TTGGAATCATGGT . 68.0 59.0 118.0 0.0 . 195 NLK 51701 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 17 26499544 26499544 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NLK NM_016231 exon7 c.T1049A p.L350X TGTAGTTGGATTT . 61.0 25.0 73.0 0.0 . 1403 NLRP2 55655 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 55497556 55497556 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NLRP2 NM_017852 exon8 c.C2239A p.L747I CGGAACCTCTGCC . 91.0 38.0 97.0 0.0 . 120 NLRP2 55655 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 55505725 55505725 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NLRP2 NM_017852 exon11 c.G2797T p.G933W GATCTGGGGCTGA . 95.0 52.0 107.0 0.0 . 120 NLRP2 55655 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 55505788 55505788 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NLRP2 NM_017852 exon11 c.T2860C p.C954R CCACTGTGCAACT . 87.0 44.0 84.0 0.0 . 120 NLRP8 126205 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 56467397 56467397 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NLRP8 NM_176811 exon3 c.T1973A p.V658E ATGAGGTGGAACT . 35.0 33.0 97.0 1.0 . 361 NOS1 4842 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 117680507 117680507 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NOS1 NM_001204218 exon21 c.T3068C p.L1023P TTGGATAGACCTG . 60.0 31.0 76.0 0.0 . 154 NOS1 4842 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 117703310 117703310 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NOS1 NM_000620 exon12 c.C1947A p.D649E CACTTTGTCACTC . 52.0 26.0 50.0 0.0 . 154 NOTCH3 4854 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 15299987 15299987 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NOTCH3 NM_000435 exon9 c.1193-2A>T . GGCGCCTGCCGGA . 66.0 25.0 79.0 0.0 . 855 NOTCH3 4854 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 15290991 15290991 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NOTCH3 NM_000435 exon20 c.A3219C p.P1073P GCCCTCTGGGCAC . 52.0 25.0 55.0 0.0 . 855 NOX3 50508 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 155776903 155776903 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NOX3 NM_015718 exon1 c.T32C p.L11P GTGGAGAGACCCT . 84.0 35.0 95.0 0.0 . 91 NOX4 50507 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 89069089 89069089 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NOX4 NM_016931 exon17 c.G1540C p.A514P TCAGTGCATGATA . 231.0 99.0 255.0 1.0 . 515 NPAP1 23742 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 15 24923872 24923872 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_018958 exon1 c.C2858A p.T953N CATATACTGCATT . 42.0 22.0 54.0 0.0 . . NPAS2 4862 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 101587535 101587535 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NPAS2 NM_002518 exon12 c.A1139T p.K380M CACTAAAGGTACG . 91.0 35.0 96.0 0.0 . 94 NPAS2 4862 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 101594175 101594175 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NPAS2 NM_002518 exon15 c.C1396G p.P466A CAGGCCCCTCTGC . 61.0 15.0 75.0 0.0 . 94 NPFFR2 10886 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 72994372 72994372 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NPFFR2 NM_004885 exon2 c.A370T p.T124S AATGACACAAAGC . 79.0 36.0 83.0 0.0 . 92 NPHP4 261734 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 5967225 5967225 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NPHP4 NM_015102 exon13 c.A1561T p.R521W TAGGCCTGGCCAA . 101.0 49.0 149.0 0.0 . 515 NPNT 255743 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 106888492 106888492 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NPNT NM_001184691 exon12 c.A1583G p.Q528R CACTCCAGGTGTT . 130.0 64.0 173.0 1.0 . 91 NPR1 4881 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 153661567 153661567 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NPR1 NM_000906 exon16 c.C2556T p.I852I CCAGATCCTGCCT . 168.0 125.0 90.0 0.0 . 393 NR4A3 8013 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 9 102590707 102590707 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NR4A3 NM_173200 exon4 c.T416A p.L139Q AGGTGCTGCCCAG . 19.0 14.0 37.0 0.0 . 186 NRK 203447 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 105153328 105153328 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NRK NM_198465 exon13 c.T1695G p.A565A ACAGGCTGCCGAG . 89.0 79.0 110.0 1.0 . 630 NRXN1 9378 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 50463975 50463975 + Silent SNP C C A rs200816799 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NRXN1 NM_001135659 exon19 c.G3618T p.V1206V CACTCGCACCAAT . 139.0 56.0 144.0 0.0 . 92 NSD1 64324 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 176637954 176637954 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NSD1 NM_022455 exon5 c.A2554G p.I852V AGTGACATAGAAA . 66.0 32.0 88.0 0.0 . 188 NSMAF 8439 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 59498516 59498516 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NSMAF NM_001144772 exon29 c.T2583C p.N861N AATGACATTAAGA . 64.0 21.0 77.0 0.0 . 91 NT5C1B-RDH14 100526794 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 18736712 18736712 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001199103 exon9 c.A1698G p.T566T CAGATTTGTCCGT . 140.0 65.0 160.0 0.0 . . NTRK2 4915 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 87325598 87325598 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NTRK2 NM_001018065 exon6 c.A475T p.I159F ATGTGGATCAAGA . 172.0 157.0 119.0 0.0 . 1404 NUDT17 200035 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 145589344 145589344 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . NUDT17 NM_001012758 exon1 c.A84G p.G28G TCCGGCTCCCAGG . 127.0 36.0 91.0 1.0 . 90 NXPE4 54827 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 114453089 114453089 + Missense_Mutation SNP A A T rs184063316 by1000genomes TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001077639 exon3 c.T751A p.C251S CAGCACAGGGCAT . 52.0 26.0 84.0 0.0 A|0.999;T|0.000 . NYAP1 222950 broad.mit.edu;bcgsc.ca 37 7 100086552 100086552 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_173564 exon4 c.C1208A p.A403D GCCGGGCCCGGAG . 7.0 5.0 23.0 0.0 . . NYAP1 222950 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 100086259 100086259 + Silent SNP A A T rs140403396 byfrequency;alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_173564 exon4 c.A915T p.S305S AGCTTCAGCCCTC . 57.0 30.0 69.0 0.0 A|0.998;C|0.002 . OLFM3 118427 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 102270334 102270334 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OLFM3 NM_058170 exon6 c.T837C p.N279N TGAGCCATTGTAG . 90.0 45.0 104.0 0.0 . 93 OPA1 4976 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 193336697 193336697 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OPA1 NM_130837 exon6 c.G650C p.G217A ATCGTGGATCTGA . 59.0 20.0 72.0 0.0 . 68 OPCML 4978 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 133402212 133402212 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OPCML NM_001012393 exon1 c.A8G p.H3R GCAGGATGGTACA . 47.0 19.0 63.0 0.0 . 93 OR10C1 442194 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 29408614 29408614 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR10C1 NM_013941 exon1 c.C822A p.S274S GGTGTCCCTCTTC . 81.0 35.0 90.0 0.0 . 22 OR10G8 219869 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 123900744 123900744 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR10G8 NM_001004464 exon1 c.T415A p.S139T GGGCGCTCGTGTA . 241.0 142.0 180.0 2.0 . 92 OR10Z1 128368 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 158576643 158576643 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR10Z1 NM_001004478 exon1 c.A415T p.T139S AATCCTACCCTCT . 169.0 40.0 107.0 0.0 . 70 OR10Z1 128368 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 158576656 158576656 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR10Z1 NM_001004478 exon1 c.A428T p.Q143L GTGCCCAGCTGGT . 179.0 138.0 107.0 0.0 . 70 OR11G2 390439 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 14 20666491 20666491 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR11G2 NM_001005503 exon1 c.A997T p.K333X AGGAACAAAGATA . 76.0 25.0 97.0 0.0 . 70 OR12D3 81797 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 29343000 29343000 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR12D3 NM_030959 exon1 c.A65T p.Q22L AAAGGCTGCAGCT . 208.0 77.0 250.0 0.0 . 133 OR1A2 26189 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 3100889 3100889 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR1A2 NM_012352 exon1 c.T77A p.V26D ATAATGTCTTCTT . 49.0 36.0 96.0 0.0 . 70 OR1D2 4991 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 2996103 2996103 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR1D2 NM_002548 exon1 c.T188A p.L63Q TTGGCCAGGAAGA . 110.0 91.0 174.0 0.0 . 69 OR1D5 8386 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 2966603 2966603 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_014566 exon1 c.A299G p.Q100R TAGAGCTGTGTCA . 140.0 91.0 306.0 0.0 . . OR1L3 26735 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 125437543 125437543 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR1L3 NM_001005234 exon1 c.C135T p.I45I GCTCATCATCTTG . 47.0 42.0 114.0 0.0 . 69 OR2A1 346528 broad.mit.edu;bcgsc.ca 37 7 144015436 144015436 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR2A1 NM_001005287 exon1 c.C219T p.T73T CTACACCCGCAAC . 221.0 46.0 251.0 0.0 . 2 OR2AT4 341152 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 74800166 74800166 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR2AT4 NM_001005285 exon1 c.C593T p.T198I TGGGGGGTGGTGT . 55.0 24.0 58.0 0.0 . 69 OR2H2 7932 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 29556136 29556136 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR2H2 NM_007160 exon1 c.T415G p.C139G CGCCTGTGCTGGC . 66.0 39.0 97.0 0.0 . 22 OR2J2 26707 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 29141976 29141976 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR2J2 NM_030905 exon1 c.A564G p.L188L GCGTTTATCATGT . 81.0 37.0 90.0 0.0 . 68 OR2J3 442186 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 29080029 29080029 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR2J3 NM_001005216 exon1 c.T362A p.M121K TGGTGATGTCCTA . 133.0 55.0 143.0 0.0 . 90 OR2S2 56656 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 35957519 35957519 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR2S2 NM_019897 exon1 c.A577G p.I193V TGGAAATGTCAGC . 79.0 45.0 86.0 0.0 . 68 OR4A15 81328 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 55135489 55135489 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR4A15 NM_001005275 exon1 c.G130A p.G44R CTCTTAGGGCTCA . 68.0 31.0 71.0 0.0 . 70 OR4A15 81328 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 55135678 55135678 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR4A15 NM_001005275 exon1 c.C319A p.P107T TTTGCTCCCAAAA . 35.0 16.0 43.0 0.0 . 70 OR4A16 81327 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 55110910 55110910 + Silent SNP A A G rs201952971 byfrequency TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR4A16 NM_001005274 exon1 c.A234G p.K78K ACCCAAATTGATG . 74.0 41.0 81.0 0.0 A|0.998;G|0.002 69 OR4C6 219432 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 55433038 55433038 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR4C6 NM_001004704 exon1 c.C396T p.I132I CACGATCATCATG . 70.0 31.0 65.0 0.0 . 70 OR4D5 219875 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 123811185 123811185 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR4D5 NM_001001965 exon1 c.A862T p.T288S ATCTATACCCTGA . 86.0 45.0 94.0 0.0 . 69 OR4K15 81127 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 20444394 20444394 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR4K15 NM_001005486 exon1 c.T717C p.V239V CTTGGTTGTCTCC . 86.0 52.0 68.0 0.0 . 69 OR4K2 390431 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 20344887 20344887 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR4K2 NM_001005501 exon1 c.T461C p.M154T GAGTTATGCATTC . 116.0 22.0 110.0 0.0 . 72 OR51A2 401667 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 4976050 4976050 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR51A2 NM_001004748 exon1 c.A894C p.K298N AATCTGTTTAGTT . 156.0 140.0 176.0 0.0 . 68 OR51A7 119687 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 4928636 4928636 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR51A7 NM_001004749 exon1 c.C37A p.L13I CTTTTCCTTCTGA . 27.0 21.0 66.0 1.0 . 70 OR51F2 119694 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 4842970 4842970 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR51F2 NM_001004753 exon1 c.C355A p.H119N TTTCTACACGGAT . 55.0 46.0 132.0 0.0 . 70 OR51G2 81282 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 4936808 4936808 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR51G2 NM_001005238 exon1 c.A86C p.H29P CAGATGTGCATGC . 49.0 7.0 84.0 1.0 . 70 OR51S1 119692 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 4870336 4870336 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR51S1 NM_001004758 exon1 c.T103A p.W35R ATGTCCACCAGGA . 67.0 55.0 120.0 0.0 . 72 OR52N5 390075 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 5799159 5799159 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR52N5 NM_001001922 exon1 c.A706T p.S236C AGAGGCTGATCGC . 62.0 48.0 128.0 0.0 . 70 OR5AP2 338675 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 56409824 56409824 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR5AP2 NM_001002925 exon1 c.G92T p.G31V AGGACTCCTTGTA . 52.0 24.0 48.0 0.0 . 71 OR5B3 441608 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 58170104 58170104 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR5B3 NM_001005469 exon1 c.C779A p.P260H GAGCTGGGTTGTA . 48.0 20.0 55.0 0.0 . 68 OR5J2 282775 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 55944226 55944226 + Missense_Mutation SNP A A G rs201858818 TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR5J2 NM_001005492 exon1 c.A133G p.M45V CTGGGCATGATCC . 72.0 36.0 74.0 0.0 A|0.999;G|0.001 115 OR6A2 8590 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 6816315 6816315 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR6A2 NM_003696 exon1 c.A625G p.I209V TAAAAATGGCCAG . 24.0 21.0 45.0 0.0 . 94 OR6C3 254786 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 55726148 55726148 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR6C3 NM_054104 exon1 c.A664G p.I222V AGGACCATTTTGA . 75.0 24.0 89.0 0.0 . 69 OR6K2 81448 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 158669603 158669603 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR6K2 NM_001005279 exon1 c.A840G p.A280A CAAAACTGCAAAG . 408.0 93.0 228.0 0.0 . 69 OR6K2 81448 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 158669632 158669632 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR6K2 NM_001005279 exon1 c.T811A p.W271R TATCCCAGAACAA . 415.0 167.0 218.0 0.0 . 69 OR7G1 125962 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 19 9226012 9226012 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR7G1 NM_001005192 exon1 c.T428A p.L143X ATCAGCAAGCCCC . 89.0 32.0 92.0 0.0 . 70 OR8B8 26493 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 11 124310403 124310403 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR8B8 NM_012378 exon1 c.T579A p.Y193X ATTCACATAGGTG . 161.0 72.0 179.0 0.0 . 69 OR8I2 120586 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 55861466 55861466 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR8I2 NM_001003750 exon1 c.A683T p.Q228L GGATCCAGTCAGC . 76.0 29.0 66.0 1.0 . 113 OR8J3 81168 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 55905003 55905003 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR8J3 NM_001004064 exon1 c.A192T p.R64S TAGATGTCTCAGG . 79.0 30.0 110.0 0.0 . 70 OR8K1 390157 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 56114284 56114284 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR8K1 NM_001002907 exon1 c.T770C p.F257S TCATGTTCTATGG . 65.0 24.0 107.0 0.0 . 70 OR8K1 390157 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 11 56114424 56114424 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR8K1 NM_001002907 exon1 c.A910T p.K304X GAAGTAAAAGATG . 41.0 16.0 51.0 0.0 . 70 OR8K3 219473 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 56086359 56086359 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR8K3 NM_001005202 exon1 c.C577A p.H193N AATACACATGAAA . 75.0 29.0 85.0 0.0 . 70 OR8K5 219453 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 55926969 55926969 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR8K5 NM_001004058 exon1 c.T825G p.S275S AAACACAGAAGCC . 95.0 36.0 110.0 0.0 . 72 OR8S1 341568 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 48919702 48919702 + Silent SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OR8S1 NM_001005203 exon1 c.C288G p.G96G AGAGGGCTGCCTG . 41.0 17.0 73.0 1.0 . 69 OR9G9 504191 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 56468593 56468593 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001013358 exon1 c.C730A p.L244M TCCCACCTGACCT . 93.0 18.0 104.0 0.0 . . OR9G9 504191 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 11 56468658 56468658 + Nonsense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001013358 exon1 c.T795G p.Y265X TAGCTATTCTTTT . 72.0 11.0 94.0 0.0 . . ORAI3 93129 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 30965031 30965031 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ORAI3 NM_152288 exon2 c.A754G p.M252V GCCATCATGGTAC . 47.0 25.0 57.0 0.0 . 68 OTOF 9381 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 26699020 26699020 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OTOF NM_194248 exon23 c.C2842T p.P948S CGGGTGGGAAGGC . 49.0 18.0 44.0 0.0 . 135 OTOP1 133060 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 4 4199319 4199319 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OTOP1 NM_177998 exon5 c.T1242A p.C414X CTCAGCACAGAGG . 57.0 32.0 68.0 0.0 . 92 OVCH1 341350 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 29580582 29580582 + Splice_Site SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OVCH1 NM_183378 exon29 c.3328-1C>A . CATACTGTGAGAA . 27.0 9.0 34.0 0.0 . 210 OXA1L 5018 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 23237247 23237247 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OXA1L NM_005015 exon3 c.A486T p.V162V AGATGTAGTCCAA . 80.0 35.0 82.0 0.0 . 204 OXR1 55074 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 107691475 107691475 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OXR1 NM_001198532 exon3 c.A261G p.G87G AGATGGAAGACGA . 137.0 60.0 184.0 0.0 . 68 OXSM 54995 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 25833109 25833109 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . OXSM NM_017897 exon2 c.G598T p.G200C CTCAAGGGCCCAA . 114.0 55.0 123.0 0.0 . 132 P2RX6 9127 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 21380894 21380894 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_005446 exon12 c.C1314A p.S438S CCATTCCGGGAGC . 72.0 26.0 96.0 0.0 . . P2RY1 5028 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 152554322 152554322 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . P2RY1 NM_002563 exon1 c.A751T p.N251Y CTGGACAACTCTC . 77.0 41.0 88.0 0.0 . 500 PADI1 29943 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 17556654 17556654 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PADI1 NM_013358 exon9 c.A1004T p.K335M ACTGCAAGCTGAC . 50.0 15.0 56.0 0.0 . 68 PAK3 5063 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 110391047 110391047 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PAK3 NM_001128168 exon5 c.T467C p.L156P CTGTTCTAGATGT . 250.0 223.0 244.0 0.0 . 1043 PAK7 57144 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 9538336 9538336 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PAK7 NM_177990 exon7 c.A1662T p.R554S GAGAGCTCTCAGA . 57.0 30.0 60.0 1.0 . 1434 PAK7 57144 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 9546811 9546811 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PAK7 NM_177990 exon5 c.T1211A p.L404H AGGCTGAGGGAGC . 46.0 21.0 67.0 0.0 . 1434 PAK7 57144 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 9561478 9561478 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PAK7 NM_177990 exon4 c.A304G p.K102E TTTCTTTCCTTAG . 65.0 22.0 72.0 0.0 . 1434 PAK7 57144 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 9624845 9624845 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PAK7 NM_177990 exon3 c.A132T p.A44A CGTATCTGCTAAC . 87.0 35.0 107.0 0.0 . 1434 PARD3B 117583 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 205989084 205989084 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PARD3B NM_205863 exon9 c.G1199T p.R400I TTACCAGAGACTC . 130.0 49.0 140.0 1.0 . 140 PAX4 5078 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 127251726 127251726 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PAX4 NM_006193 exon8 c.C752A p.S251Y CCAGGGGACTGCT . 22.0 12.0 27.0 0.0 . 227 PAX7 5081 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 19071418 19071418 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PAX7 NM_001135254 exon9 c.T1513G p.Y505D CAGGCCTACTAGG . 112.0 45.0 131.0 0.0 . 1630 PBX4 80714 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 19675781 19675781 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PBX4 NM_025245 exon6 c.C886T p.P296S TCCCTGGGACCCC . 94.0 47.0 107.0 0.0 . 154 PCDH10 57575 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 134084265 134084265 + Silent SNP C C A rs151224823 byfrequency;alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCDH10 NM_032961 exon4 c.C2931A p.G977G TCCTGGCATGGAC . 89.0 37.0 92.0 0.0 C|0.998;G|0.002 92 PCDH11X 27328 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 91873834 91873834 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCDH11X NM_032968 exon7 c.C3939T p.P1313P TCATCCCAGTGAT . 162.0 151.0 172.0 0.0 . 193 PCDH7 5099 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 30724512 30724512 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCDH7 NM_032457 exon1 c.T1468C p.S490P CACACCTCGACCC . 45.0 22.0 57.0 0.0 . 229 PCDHA10 56139 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 140237342 140237342 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCDHA10 NM_031859 exon1 c.G1709T p.G570V CCGCTGGCAGCGC . 24.0 21.0 25.0 0.0 . 99 PCDHA10 56139 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140237048 140237048 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCDHA10 NM_031859 exon1 c.A1415T p.H472L GCTGCCACATCTT . 78.0 72.0 94.0 0.0 . 99 PCDHA12 56137 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140257188 140257188 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_018903 exon1 c.C2131T p.L711L AGCCTGCTGGTGC . 67.0 36.0 78.0 0.0 . . PCDHA13 56136 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140263324 140263324 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCDHA13 NM_031865 exon1 c.T1471A p.S491T CTGGTCTCCTACT . 80.0 37.0 102.0 0.0 . 75 PCDHA3 56145 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140180880 140180880 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCDHA3 NM_031497 exon1 c.A98T p.Y33F TCCACTACTCCGT . 34.0 17.0 25.0 0.0 . 98 PCDHA7 56141 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140215472 140215472 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd PCDHA7,NS,carcinoma,-1 PCDHA7 NM_031852 exon1 c.C1504G p.R502G GGCGAGCGCGCGC . 50.0 14.0 53.0 0.0 . 94 PCDHB10 56126 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140572209 140572209 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCDHB10 NM_018930 exon1 c.T84C p.S28S AGGTTCTGGGTTT . 290.0 146.0 377.0 0.0 . 92 PCDHB2 56133 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140474700 140474700 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCDHB2 NM_018936 exon1 c.A326T p.Q109L CTTTCCAGGTGTT . 125.0 67.0 134.0 1.0 . 96 PCDHB3 56132 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140480277 140480277 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCDHB3 NM_018937 exon1 c.T44C p.L15S AAGTCTTGCTTCT . 77.0 29.0 112.0 0.0 . 92 PCDHGA10 56106 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140793269 140793269 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_032090 exon1 c.T527A p.L176H ATCAGCTCAGCCC . 54.0 36.0 68.0 0.0 . . PCDHGA10 56106 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140794504 140794504 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_032090 exon1 c.C1762T p.P588S GCAGAGCCCGGCT . 45.0 13.0 50.0 0.0 . . PCDHGA3 56112 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140725276 140725276 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCDHGA3 NM_032011 exon1 c.C1676T p.A559V ACAACGCGCCCGA . 68.0 26.0 92.0 0.0 . 68 PCDHGB3 56102 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140751344 140751344 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_018924 exon1 c.A1383T p.V461V GCATGTAGCTGAG . 64.0 33.0 93.0 0.0 . . PCDHGC3 5098 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 140856012 140856012 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCDHGC3 NM_032402 exon1 c.T329C p.L110S TGGAGTTGGTAGT . 95.0 61.0 108.0 0.0 . 24 PCGF2 7703 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 36891668 36891668 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCGF2 NM_007144 exon11 c.C843A p.T281T GGATGGGGTGGCT . 55.0 25.0 50.0 0.0 . 658 PCLO 27445 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 82764790 82764790 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCLO NM_014510 exon3 c.G2076T p.Q692H GAGATCCTGTTTT . 95.0 45.0 114.0 0.0 . 29 PCLO 27445 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 7 82764680 82764680 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCLO NM_014510 exon3 c.T2186A p.L729X TTGGACAAAGAAT . 90.0 36.0 103.0 0.0 . 29 PCNXL2 80003 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 233353792 233353792 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCNXL2 NM_014801 exon11 c.G2643T p.Q881H GGAGTACTGGCAG . 79.0 69.0 153.0 0.0 . 91 PCSK5 5125 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 78973635 78973635 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PCSK5 NM_001190482 exon37 c.A5380T p.S1794C TATAAGAGCAGCT . 180.0 53.0 163.0 1.0 . 93 PDE10A 10846 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 165863831 165863831 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PDE10A NM_001130690 exon4 c.A245C p.Q82P ACTCCCTGCATAT . 75.0 26.0 81.0 0.0 . 519 PDE1C 5137 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 32109959 32109959 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PDE1C NM_001191056 exon1 c.T47A p.L16Q TATTTCAGAGAGT . 110.0 45.0 97.0 1.0 . 94 PDE6B 5158 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 656968 656968 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PDE6B NM_001145291 exon15 c.T1912A p.S638T CTGCTCTCGGAGG . 87.0 27.0 129.0 0.0 . 90 PDGFRA 5156 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 55138653 55138653 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PDGFRA NM_006206 exon9 c.G1330C p.D444H CTTCCTGATATTG . 53.0 26.0 79.0 0.0 . 9497 PDIA2 64714 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 333349 333349 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PDIA2 NM_006849 exon1 c.T180A p.P60P GCACCCTGCCCTG . 47.0 27.0 67.0 0.0 . 91 PDLIM4 8572 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 5 131607517 131607517 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PDLIM4 NM_003687 exon6 c.T704A p.L235H GGAACCTCAAGCC . 61.0 18.0 62.0 0.0 . 91 PDZD4 57595 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 X 153073936 153073936 + Frame_Shift_Del DEL C C - novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PDZD4 NM_032512 exon2 c.175delG p.D59fs AGCTGTCCCCCCG . 46.0 40.0 100.0 0.0 . 193 PFKFB3 5209 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 6255708 6255708 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PFKFB3 NM_004566 exon2 c.A199G p.K67E CCCACAAAAGGTG . 55.0 29.0 45.0 0.0 . 117 PGBD1 84547 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 28268678 28268678 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PGBD1 NM_001184743 exon7 c.A1047G p.R349R AGCTCGAGTGAGT . 91.0 48.0 92.0 0.0 . 94 PGBD3 267004 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 10 50724703 50724703 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PGBD3 NM_170753 exon2 c.C458T p.P153L ATGACCTCGTCAT . 72.0 34.0 122.0 0.0 . 109 PGM2 55276 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 37836307 37836307 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PGM2 NM_018290 exon3 c.A317G p.D106G GTTTTGACGCCCG . 377.0 182.0 426.0 0.0 . 91 PHACTR1 221692 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 12749960 12749960 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_030948 exon4 c.T188A p.V63E GGAGAGTGCGCTC . 38.0 17.0 40.0 0.0 . . PHACTR1 221692 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 13160509 13160509 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_030948 exon6 c.T489C p.Y163Y AATCTATGATAAA . 88.0 24.0 67.0 0.0 . . PHACTR3 116154 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 58349384 58349384 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PHACTR3 NM_080672 exon7 c.A1013T p.E338V GCAAGGAGAGGGA . 99.0 36.0 85.0 0.0 . 93 PHC2 1912 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 33836103 33836103 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PHC2 NM_198040 exon4 c.T495A p.A165A CTGCTGAGCGATG . 51.0 20.0 56.0 0.0 . 227 PHF21B 112885 broad.mit.edu;ucsc.edu;mdanderson.org 37 22 45312213 45312213 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PHF21B NM_138415 exon4 c.G511T p.V171L TGACCACAGACAC . 13.0 5.0 15.0 0.0 . 93 PHGDH 26227 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 120284474 120284474 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PHGDH NM_006623 exon10 c.T1163C p.V388A CGGATGTGAACTT . 47.0 18.0 55.0 0.0 . 91 PHIP 55023 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 79657378 79657378 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PHIP NM_017934 exon36 c.A4168T p.S1390C AATTACTGAAAAT . 88.0 36.0 88.0 1.0 . 579 PHIP 55023 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 79770201 79770201 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PHIP NM_017934 exon6 c.A433T p.S145C CAATGCTGGGTGG . 52.0 22.0 62.0 0.0 . 579 PHKB 5257 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 47622970 47622970 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PHKB NM_000293 exon10 c.T1025C p.L342S CATCATTGGAAGA . 26.0 23.0 72.0 0.0 . 154 PHKB 5257 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 47727355 47727355 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PHKB NM_000293 exon28 c.A2832T p.R944R TGACCGAGTGTGG . 70.0 59.0 148.0 0.0 . 154 PHKG2 5261 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 30764551 30764551 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PHKG2 NM_001172432 exon5 c.327-2A>T . TCCCTTAGGATGC . 42.0 20.0 57.0 0.0 . 334 PHOSPHO2 493911 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 170557709 170557709 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PHOSPHO2 NM_001199286 exon4 c.A228T p.P76P CACTCCAGGGATG . 103.0 51.0 118.0 0.0 . 91 PHTF2 57157 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 77567113 77567113 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PHTF2 NM_001127357 exon11 c.A1323T p.A441A GAAAGCAGACATG . 276.0 119.0 289.0 0.0 . 23 PIDD 55367 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 801093 801093 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PIDD NM_145887 exon10 c.A1658T p.H553L AACAGGTGCAGGC . 21.0 14.0 64.0 0.0 . 205 PITPNM2 57605 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 123498472 123498472 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PITPNM2 NM_020845 exon3 c.G196T p.G66C GCATGCCCACATG . 72.0 30.0 80.0 0.0 . 228 PIWIL4 143689 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 94354059 94354059 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PIWIL4 NM_152431 exon20 c.A2460T p.P820P TGTCCCAGCACCA . 86.0 40.0 82.0 0.0 . 91 PKD1L1 168507 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 47870899 47870899 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PKD1L1 NM_138295 exon42 c.A6389C p.Q2130P CAAGGCTGAAGGG . 118.0 50.0 125.0 0.0 . 145 PKD1L1 168507 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 7 47970705 47970705 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PKD1L1 NM_138295 exon6 c.A733T p.R245X ACCTTCTGGGAGA . 48.0 22.0 52.0 0.0 . 145 PKD1L2 114780 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 81248727 81248727 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PKD1L2 NM_001076780 exon3 c.T536A p.V179D TCCTGGACCTGGA . 37.0 29.0 107.0 0.0 . 92 PKDREJ 10343 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 46657787 46657787 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PKDREJ NM_006071 exon1 c.T1433C p.L478S AGGAACAAAGAAA . 54.0 26.0 73.0 0.0 . 156 PKHD1 5314 broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 51491880 51491880 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PKHD1 NM_138694 exon66 c.T11700A p.T3900T ATTATTAGTCTGG . 42.0 16.0 83.0 1.0 . 603 PKHD1 5314 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 51890688 51890688 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PKHD1 NM_170724 exon32 c.A3920G p.Q1307R TCTCCTTGCATGG . 96.0 44.0 97.0 0.0 . 603 PKHD1L1 93035 broad.mit.edu;ucsc.edu;bcgsc.ca 37 8 110413802 110413802 + Missense_Mutation SNP T T G rs201291395 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PKHD1L1 NM_177531 exon14 c.T1358G p.L453R TTCATCTGCAGAA . 109.0 44.0 141.0 1.0 T|0.999;C|0.000 145 PLA2G4C 8605 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 48551611 48551611 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLA2G4C NM_001159322 exon17 c.T1645G p.C549G CCAAGCAGCAACT . 40.0 24.0 44.0 0.0 . 92 PLA2G4D 283748 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 42364510 42364510 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLA2G4D NM_178034 exon14 c.T1398C p.N466N TTTGACATTGAGG . 42.0 20.0 51.0 0.0 . 136 PLAC1 10761 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 133700330 133700330 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLAC1 NM_021796 exon3 c.G383T p.C128F ATGGAGCAGGGCT . 76.0 70.0 70.0 0.0 . 131 PLAG1 5324 broad.mit.edu;ucsc.edu;mdanderson.org 37 8 57079715 57079715 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLAG1 NM_001114634 exon4 c.G590A p.R197Q TCCTTTCGGGTGT . 25.0 4.0 38.0 0.0 . 1107 PLCB2 5330 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 40591344 40591344 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLCB2 NM_004573 exon8 c.A668T p.E223V AAGATCTCATCTA . 43.0 18.0 71.0 0.0 . 275 PLCB4 5332 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 9449299 9449299 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLCB4 NM_001172646 exon35 c.G3330A p.K1110K TATCAAGAATAAA . 37.0 11.0 35.0 0.0 . 274 PLCH2 9651 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 2409915 2409915 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLCH2 NM_014638 exon2 c.T125C p.V42A GTCCAGTGGAGCG . 41.0 23.0 54.0 0.0 . 229 PLEC 5339 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 144996711 144996711 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLEC NM_201380 exon31 c.C7797A p.L2599L CTGTTGGAGCTTC . 15.0 7.0 35.0 0.0 . 141 PLEK2 26499 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 67857415 67857415 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLEK2 NM_016445 exon7 c.G820A p.D274N CTGGATCCTTCCT . 92.0 36.0 115.0 0.0 . 92 PLEKHA7 144100 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 16816089 16816089 + Missense_Mutation SNP C C A rs150403598 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLEKHA7 NM_175058 exon19 c.G2691T p.Q897H CCTCAGCTGGGGT . 31.0 21.0 67.0 0.0 C|1.000;G|0.000 227 PLEKHD1 400224 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 69967307 69967307 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLEKHD1 NM_001161498 exon3 c.T257A p.L86Q TCCCTCTGGGGGG . 31.0 16.0 44.0 0.0 . 68 PLEKHG4 25894 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 67322137 67322137 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLEKHG4 NM_001129728 exon20 c.G3288A p.S1096S GGCCTCGAACTCC . 19.0 5.0 46.0 0.0 . 92 PLEKHG4B 153478 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 163383 163383 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLEKHG4B NM_052909 exon11 c.A2128T p.T710S ACCCAGACCCTGG . 41.0 32.0 99.0 0.0 . 228 PLG 5340 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 161160115 161160115 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLG NM_000301 exon16 c.A1893G p.S631S GCCTTCATCCTAC . 121.0 48.0 104.0 0.0 . 94 PLK2 10769 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 57750786 57750786 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLK2 NM_006622 exon13 c.A1818T p.L606L AGATTTTAGCCAC . 123.0 54.0 157.0 0.0 . 409 PLXNB1 5364 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 48465277 48465277 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PLXNB1 NM_001130082 exon3 c.A744G p.V248V TCGAGATACATAG . 115.0 48.0 147.0 1.0 . 293 PNPT1 87178 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 55910944 55910944 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PNPT1 NM_033109 exon5 c.A429T p.P143P GCCAGCTGGAAAG . 281.0 125.0 335.0 1.0 . 90 PODXL2 50512 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 127379659 127379659 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PODXL2 NM_015720 exon3 c.A788C p.Q263P CCAGCCAAGAGGC . 138.0 60.0 121.0 0.0 . 91 POGZ 23126 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 151403269 151403269 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . POGZ NM_015100 exon4 c.A332G p.Q111R GGATTCTGGGTCA . 128.0 47.0 61.0 0.0 . 93 POLE2 5427 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 50140842 50140842 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . POLE2 NM_001197331 exon5 c.A416T p.Q139L CTTACCTGGTGCA . 93.0 39.0 89.0 0.0 . 229 POLQ 10721 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 121263593 121263593 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . POLQ NM_199420 exon2 c.A324C p.G108G ATTCTTTCCTTCC . 159.0 67.0 166.0 0.0 . 664 POLR3E 55718 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 22316495 22316495 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . POLR3E NM_001258033 exon3 c.A55G p.K19E TTGGCCAAGAGTC . 71.0 29.0 76.0 0.0 . 91 PON3 5446 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 95023973 95023973 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PON3 NM_000940 exon2 c.A128T p.H43L ATAAGGTGGCAGT . 81.0 44.0 109.0 0.0 . 91 POU2F2 5452 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 42621499 42621499 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . POU2F2 NM_002698 exon5 c.G206T p.S69I TCGCCACTGGGGT . 34.0 21.0 26.0 0.0 . 227 PPAP2A 8611 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 54763943 54763943 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PPAP2A NM_176895 exon3 c.A248T p.N83I AAAAGGTTACAGT . 57.0 22.0 74.0 0.0 . 92 PPM1H 57460 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 63083571 63083571 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PPM1H NM_020700 exon8 c.A1153G p.T385A CAATAGTTGCCAT . 52.0 22.0 62.0 0.0 . 637 PPP1R17 10842 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 31732116 31732116 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_006658 exon2 c.G61T p.D21Y AAGCTAGACCCTC . 90.0 40.0 87.0 0.0 . . PPP1R3A 5506 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 113520088 113520088 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PPP1R3A NM_002711 exon4 c.A1059T p.A353A CCCCTCTGCTTTA . 137.0 63.0 135.0 0.0 . 832 PPP1R3A 5506 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 7 113519017 113519017 + Nonsense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PPP1R3A NM_002711 exon4 c.C2130A p.C710X TTCACAGCACACT . 54.0 27.0 76.0 0.0 . 832 PPP2R5B 5526 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 64699068 64699068 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PPP2R5B NM_006244 exon10 c.G983C p.C328S AAACCTGCACCCA . 49.0 16.0 59.0 0.0 . 660 PPYR1 5540 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 10 47087208 47087208 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PPYR1 NM_005972 exon3 c.T425C p.L142P ATCAGCTCATCAT . 124.0 24.0 107.0 0.0 . 524 PRAME 23532 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 22892325 22892325 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRAME NM_206954 exon5 c.T776C p.M259T TTAATCATCTGGC . 80.0 32.0 75.0 0.0 . 515 PRAMEF2 65122 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 12921328 12921328 + Silent SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRAMEF2 NM_023014 exon4 c.G1119C p.L373L TGGCCTGAGCTGC . 161.0 16.0 207.0 0.0 . 68 PRDM15 63977 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 43281737 43281737 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRDM15 NM_022115 exon7 c.A826C p.M276L TGTGCATGCTGGC . 59.0 21.0 75.0 0.0 . 90 PRDM16 63976 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 3102902 3102902 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRDM16 NM_022114 exon2 c.T251A p.F84Y CAGACTTCGAGCT . 121.0 51.0 190.0 0.0 . 660 PRDM16 63976 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 3319469 3319469 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRDM16 NM_022114 exon6 c.T791A p.L264Q AGGGCCTGGCTGA . 167.0 89.0 212.0 0.0 . 660 PRICKLE2 166336 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 64148718 64148718 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRICKLE2 NM_198859 exon3 c.C232A p.H78N GCTGGTGTAGTAG . 68.0 25.0 68.0 0.0 . 95 PRKCG 5582 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 19 54401219 54401219 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRKCG NM_002739 exon10 c.C946A p.R316R CGGGTGCGGATGG . 38.0 22.0 57.0 0.0 . 1367 PRKDC 5591 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 48794060 48794060 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd PRKDC,NS,carcinoma,0 PRKDC . . . . TTGTATTAAAAGA . 151.0 63.0 201.0 0.0 . 1515 PRKG1 5592 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 53564432 53564432 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRKG1 NM_006258 exon4 c.A680G p.Y227C CCGAGTATATGGA . 38.0 20.0 61.0 0.0 . 523 PRLHR 2834 broad.mit.edu;bcgsc.ca 37 10 120353894 120353894 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRLHR NM_004248 exon2 c.C863A p.A288D CAGACGGCGAACA . 6.0 5.0 16.0 0.0 . 90 PROM1 8842 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 4 16025970 16025970 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PROM1 NM_006017 exon6 c.T642A p.Y214X CAATATATATTTG . 55.0 33.0 73.0 0.0 . 207 PRR16 51334 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 120022245 120022245 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRR16 NM_016644 exon3 c.T687C p.P229P CCTCCCTCCTACA . 104.0 31.0 147.0 1.0 . 71 PRR5-ARHGAP8 553158 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 45218295 45218295 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRR5-ARHGAP8 NM_181334 exon9 c.A797T p.E266V TGAGTGAGCTCCA . 66.0 26.0 118.0 0.0 . 161 PRRC2C 23215 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 171510057 171510057 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_015172 exon16 c.A3446T p.E1149V TTATAGAGAGGCC . 338.0 74.0 186.0 0.0 . . PRSS54 221191 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 58320072 58320072 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRSS54 NM_001080492 exon5 c.A291C p.I97I GTTACTTATACCC . 49.0 38.0 115.0 0.0 . 70 PRSS58 136541 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 141952141 141952141 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRSS58 NM_001001317 exon6 c.T626G p.L209R AAAGACAGGATTC . 119.0 45.0 123.0 0.0 . 24 PRUNE2 158471 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 79324425 79324425 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRUNE2 NM_015225 exon8 c.T2765C p.F922S TCCTCAAAAAGGT . 170.0 41.0 138.0 0.0 . 157 PRX 57716 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 40903671 40903671 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PRX NM_181882 exon7 c.A588T p.R196R CACTTCTCGTACA . 19.0 10.0 23.0 0.0 . 92 PSD2 84249 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 139193135 139193135 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PSD2 NM_032289 exon3 c.T613A p.F205I ATGGCGTTTGAGG . 78.0 49.0 93.0 0.0 . 91 PSG3 5671 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 43233999 43233999 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PSG3 NM_021016 exon4 c.C919A p.P307T GATAGGGTCCTGT . 23.0 9.0 32.0 0.0 . 92 PSG6 5675 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 43412004 43412004 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PSG6 NM_001031850 exon4 c.A709G p.K237E GCAGCTTCGCTGT . 40.0 24.0 39.0 0.0 . 92 PSMD1 5707 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 231944930 231944930 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PSMD1 NM_002807 exon12 c.G1315A p.E439K TATCAGGAAGGTG . 86.0 40.0 110.0 0.0 . 92 PSRC1 84722 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 109824547 109824547 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PSRC1 NM_001032291 exon4 c.A213C p.P71P CTTCTCTGGACTG . 114.0 43.0 136.0 0.0 . 90 PTCHD2 57540 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 11589857 11589857 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PTCHD2 NM_020780 exon15 c.T2943C p.R981R GGCCCGTCTCTCA . 63.0 35.0 79.0 0.0 . 209 PTGER3 5733 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 71418661 71418661 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PTGER3 NM_198718 exon4 c.A1186C p.R396R CTTCTCTGTTCAG . 42.0 13.0 55.0 0.0 . 660 PTGS2 5743 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 186645249 186645249 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PTGS2 NM_000963 exon8 c.A1038G p.K346K GTCAAATTTCAGT . 214.0 147.0 129.0 0.0 . 227 PTH2R 5746 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 2 209345825 209345825 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PTH2R NM_005048 exon10 c.A1012T p.R338X ACGGTTAGAGTTC . 178.0 69.0 181.0 0.0 . 502 PTPN22 26191 broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 114394650 114394650 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PTPN22 NM_015967 exon10 c.A827C p.Q276P CATACCTGCGTTT . 41.0 14.0 47.0 0.0 . 227 PTPN5 84867 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 18755139 18755139 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PTPN5 NM_032781 exon10 c.C1044A p.D348E CAGAGGGTCGTCA . 48.0 41.0 99.0 0.0 . 229 PTPRB 5787 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 12 70983979 70983979 + Frame_Shift_Del DEL A A - novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PTPRB NM_001109754 exon8 c.1815delT p.N605fs GCCATTATTGTTT . 112.0 38.0 153.0 0.0 . 226 PTPRD 5789 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 8486105 8486105 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PTPRD NM_002839 exon28 c.G2712A p.G904G CTCCTCCCCAAAG . 115.0 59.0 108.0 0.0 . 912 PTPRE 5791 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 10 129869164 129869164 + Silent SNP G G T rs143511195 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PTPRE NM_006504 exon15 c.G1386T p.P462P CATCCCGTGTAAG . 34.0 23.0 68.0 0.0 G|1.000;C|0.000 227 PTPRQ 374462 broad.mit.edu;bcgsc.ca 37 12 80940430 80940430 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001145026 exon21 c.T3453C p.N1151N TGGAAATGGCAAT . 251.0 14.0 265.0 0.0 . . PTPRQ 374462 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 12 81042674 81042674 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001145026 exon33 c.5400-2A>T . TATTGCAGGTTAC . 231.0 87.0 257.0 0.0 . . PTPRZ1 5803 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 121684539 121684539 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PTPRZ1 NM_002851 exon23 c.C6001A p.L2001M GAGGTGCTGGACA . 81.0 38.0 70.0 0.0 . 699 PVRL4 81607 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 161044159 161044159 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PVRL4 NM_030916 exon6 c.C1005A p.P335P TTCCTGGGGGTCT . 182.0 38.0 112.0 0.0 . 92 PWWP2A 114825 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 159519900 159519900 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PWWP2A NM_001130864 exon2 c.A1757T p.D586V GTGCTATCAATGC . 33.0 13.0 41.0 0.0 . 68 PWWP2A 114825 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 159519933 159519933 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PWWP2A NM_001130864 exon2 c.C1724G p.S575C GAGTCAGATTTCT . 39.0 17.0 45.0 0.0 . 68 PXDN 7837 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 1667460 1667460 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PXDN NM_012293 exon12 c.A1484T p.H495L TGGTCGTGGAGGG . 51.0 25.0 56.0 0.0 . 166 PYDC1 260434 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 31228226 31228226 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . PYDC1 NM_152901 exon1 c.G124T p.G42C GCGCGCCCCGCGG . 86.0 44.0 97.0 0.0 . 68 QRFP 347148 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 133768976 133768976 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . QRFP NM_198180 exon1 c.T250A p.C84S ATCTGCAGCCAGC . 38.0 34.0 101.0 0.0 . 90 R3HDML 140902 broad.mit.edu;bcgsc.ca;mdanderson.org 37 20 42973928 42973928 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . R3HDML NM_178491 exon4 c.T539A p.L180Q ATCGGCTGGGCTG . 103.0 39.0 101.0 1.0 . 90 RABGAP1 23637 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 125782674 125782674 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RABGAP1 NM_012197 exon13 c.A1730T p.Q577L TCTGGCAGCTGCT . 27.0 23.0 59.0 0.0 . 500 RAD51B 5890 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 68758622 68758622 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RAD51B NM_133509 exon8 c.A778G p.T260A CAGATTACAACCC . 44.0 20.0 47.0 0.0 . 660 RAD51D 5892 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 33434032 33434032 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RAD51D NM_001142571 exon5 c.C515A p.A172D GTTTTAGCCTGAA . 45.0 10.0 68.0 0.0 . 228 RADIL 55698 broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 4843189 4843189 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RADIL NM_018059 exon11 c.A2487C p.P829P GCACACTGGCTGG . 47.0 18.0 41.0 0.0 . 994 RAG1 5896 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 36596843 36596843 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RAG1 NM_000448 exon2 c.A1989C p.A663A GCTGGCAGATGAG . 92.0 38.0 96.0 0.0 . 230 RAG2 5897 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 36614915 36614915 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RAG2 NM_001243785 exon3 c.T804C p.N268N TTCATCATTGTTA . 48.0 18.0 48.0 0.0 . 95 RANBP3 8498 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 5918611 5918611 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RANBP3 NM_007322 exon15 c.A1369T p.T457S GCTTGGTGTTGAG . 96.0 49.0 118.0 0.0 . 272 RANBP6 26953 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 6012662 6012662 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RANBP6 NM_012416 exon1 c.A2946T p.S982S TATTGCTGAGATA . 77.0 8.0 171.0 0.0 . 229 RARG 5916 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 53605571 53605571 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RARG NM_000966 exon10 c.C1254G p.N418K TTCAGGGTTCTCC . 30.0 12.0 39.0 0.0 . 722 RASAL1 8437 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 113557018 113557018 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RASAL1 NM_004658 exon8 c.T557A p.L186Q TCCCGCAGCTCCA . 50.0 22.0 63.0 0.0 . 229 RASGRF2 5924 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 80363997 80363997 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RASGRF2 NM_006909 exon3 c.A542T p.E181V AATCAGAGGTATT . 61.0 42.0 79.0 0.0 . 725 RASGRP1 10125 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 38804991 38804991 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RASGRP1 NM_001128602 exon7 c.T842C p.V281A TGAGCCACCTGGA . 68.0 27.0 78.0 0.0 . 697 RASSF4 83937 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 45484737 45484737 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RASSF4 NM_032023 exon7 c.C547G p.P183A TTTACTCCAGCCT . 52.0 19.0 68.0 0.0 . 290 RAX 30062 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 18 56936364 56936364 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RAX NM_013435 exon3 c.T913A p.C305S GCCCGCACGGGTA . 42.0 15.0 51.0 0.0 . 90 RB1 5925 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 13 48953748 48953748 + Frame_Shift_Del DEL C C - novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RB1 NM_000321 exon14 c.1351delC p.R451fs GGAGTTCGCTTGT . 212.0 191.0 277.0 0.0 . 3784 RB1 5925 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 49030437 49030437 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RB1 NM_000321 exon19 c.A1912T p.T638S TTCCAGACCCAGA . 275.0 116.0 279.0 0.0 . 3784 RBL2 5934 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 16 53498136 53498136 + Splice_Site SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RBL2 NM_005611 exon12 c.1561-2A>G . TTTTATAGGGTAT . 30.0 25.0 50.0 0.0 . 841 RBM48 84060 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 7 92158171 92158171 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_032120 exon1 c.A44T p.H15L ATCACCACGTCCA . 108.0 50.0 131.0 0.0 . . RBMXL3 139804 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 X 114424720 114424720 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001145346 exon1 c.T716C p.V239A CGCGGGTCCGGGA . 33.0 28.0 42.0 0.0 . . RCC1 1104 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 28864505 28864505 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RCC1 NM_001048194 exon11 c.A1345G p.K449E AAGGACAAAGAAC . 37.0 14.0 66.0 0.0 . 228 RCOR3 55758 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 211447593 211447593 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RCOR3 NM_001136223 exon4 c.A343G p.N115D GGCTACAATGTGG . 201.0 158.0 417.0 0.0 . 91 RDH10 157506 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 74233273 74233273 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RDH10 NM_172037 exon4 c.A731G p.Y244C GCCCTTATCTTGT . 46.0 18.0 79.0 0.0 . 514 RDH13 112724 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 55556516 55556516 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RDH13 NM_001145971 exon7 c.A922G p.R308G AAAGCCTCCGGGC . 80.0 21.0 119.0 0.0 . 92 RECK 8434 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 36122893 36122893 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RECK NM_021111 exon21 c.C2767T p.H923Y GCGTCCCATGTCC . 128.0 51.0 144.0 1.0 . 93 RFPL4B 442247 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 6 112671556 112671556 + Frame_Shift_Del DEL G G - novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RFPL4B NM_001013734 exon3 c.646delG p.E216fs GACTTAGAAGAAA . 49.0 28.0 46.0 0.0 . 68 RFTN2 130132 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 198540055 198540055 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RFTN2 NM_144629 exon1 c.T128A p.F43Y AGAGTAAAATCCA . 71.0 28.0 109.0 0.0 . 90 RGP1 9827 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 35752015 35752015 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RGP1 NM_001080496 exon8 c.A825G p.A275A TGGGGCAGGGGGT . 92.0 34.0 112.0 0.0 . 23 RGPD8 727851 broad.mit.edu;bcgsc.ca 37 2 113145873 113145873 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001164463 exon20 c.G4649A p.S1550N TCACTACTAAAAA . 299.0 91.0 327.0 0.0 . . RGS13 6003 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 192627447 192627447 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RGS13 NM_002927 exon6 c.A244T p.R82W ATTTCTAGGGCAA . 264.0 194.0 136.0 1.0 . 226 RGS22 26166 broad.mit.edu;ucsc.edu;bcgsc.ca 37 8 101075783 101075783 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RGS22 NM_015668 exon8 c.A1213T p.R405W AAGTCCTATGAGA . 79.0 38.0 98.0 1.0 . 140 RGS9BP 388531 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 33167237 33167237 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RGS9BP NM_207391 exon1 c.T68A p.L23Q ACCACCTGGTGCT . 50.0 22.0 34.0 0.0 . 90 RHBDF1 64285 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 114754 114754 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RHBDF1 NM_022450 exon3 c.A191G p.H64R AGCTCATGGTGGG . 44.0 20.0 66.0 0.0 . 92 RIMS2 9699 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 104924293 104924293 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RIMS2 NM_001100117 exon6 c.T1705G p.W569G GTAACCTGGCAAC . 57.0 26.0 53.0 0.0 . 279 RIT2 6014 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 40554045 40554045 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RIT2 NM_001272077 exon3 c.T228A p.A76A CTGGCCAGCAGTG . 252.0 134.0 296.0 1.0 . 1084 RLIM 51132 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 73812565 73812565 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RLIM NM_183353 exon5 c.A585T p.S195S TTCAGTTGAATTT . 43.0 33.0 47.0 0.0 . 228 RNF111 54778 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 59373264 59373264 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RNF111 NM_017610 exon8 c.A2078G p.H693R CTTTCCATTCTCA . 199.0 91.0 202.0 0.0 . 92 RNF115 27246 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 145663367 145663367 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RNF115 NM_014455 exon4 c.G428C p.G143A TTGAAGGGTGAGT . 125.0 43.0 77.0 0.0 . 91 RNF121 55298 broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 71705854 71705854 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RNF121 NM_018320 exon7 c.A717G p.E239E CAGTGAAGAGGGG . 49.0 24.0 69.0 2.0 . 226 RNF144B 255488 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 18465185 18465185 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RNF144B NM_182757 exon8 c.A799G p.I267V TTGGGCATCATTG . 135.0 64.0 118.0 0.0 . 226 RNF148 378925 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 122342188 122342188 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RNF148 NM_198085 exon1 c.A617G p.Y206C TCTAAGTAAAAGT . 44.0 23.0 41.0 0.0 . 204 RNF157 114804 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 74151646 74151646 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RNF157 NM_052916 exon15 c.A1695G p.G565G TACCTCTCCTTCT . 55.0 17.0 52.0 0.0 . 228 RNF168 165918 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 196199329 196199329 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RNF168 NM_152617 exon6 c.A1077G p.S359S CACCCCTGATGTG . 98.0 45.0 93.0 0.0 . 90 RNF19A 25897 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 101287279 101287279 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RNF19A NM_015435 exon4 c.A785T p.Q262L CAGGTCTGGTTGG . 112.0 55.0 128.0 0.0 . 229 ROBO2 6092 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 77595492 77595492 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ROBO2 NM_002942 exon7 c.C938T p.P313L TAGCTCCCCCACA . 58.0 22.0 51.0 0.0 . 328 ROCK1 6093 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 18559965 18559965 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ROCK1 NM_005406 exon22 c.A2560G p.T854A AAAGTGTCTGCAA . 47.0 20.0 60.0 0.0 . 1026 ROCK2 9475 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 11375944 11375944 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ROCK2 NM_004850 exon5 c.G607A p.D203N TTGCATCCAGAGC . 185.0 95.0 204.0 1.0 . 546 ROR2 4920 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 94488970 94488970 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ROR2 NM_004560 exon8 c.A1239T p.A413A TGGAATTGCGATG . 57.0 25.0 71.0 0.0 . 1471 ROS1 6098 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 117609770 117609770 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ROS1 NM_002944 exon43 c.A6929C p.H2310P TCTGCATGTGGTT . 115.0 51.0 142.0 0.0 . 1353 RPL4 6124 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 15 66795504 66795504 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RPL4 NM_000968 exon4 c.176-2A>T . ATGACCTAAAATT . 115.0 44.0 110.0 0.0 . 90 RPS6KA6 27330 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 83390124 83390124 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RPS6KA6 NM_014496 exon7 c.T596G p.L199R GGCTTCAGGTCTC . 260.0 233.0 301.0 0.0 . 615 RPS6KC1 26750 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 213303010 213303010 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RPS6KC1 NM_012424 exon6 c.G613T p.G205W GCACTAGGGGCTG . 39.0 27.0 89.0 0.0 . 417 RSPH6A 81492 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 46318016 46318016 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RSPH6A NM_030785 exon1 c.A419T p.E140V GGGGGCTCCTGGA . 52.0 23.0 74.0 0.0 . 91 RSPO2 340419 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 109094862 109094862 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RSPO2 NM_178565 exon2 c.A5G p.Q2R CGAAACTGCATCT . 29.0 11.0 42.0 0.0 . 231 RTP4 64108 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 187088757 187088757 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RTP4 NM_022147 exon2 c.A337T p.R113W ACCATGAGGATTC . 103.0 48.0 109.0 0.0 . 90 RUFY3 22902 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 71629350 71629350 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RUFY3 NM_001130709 exon3 c.A614T p.E205V CCGCAGAGATAAC . 314.0 160.0 400.0 0.0 . 90 RUNX1T1 862 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 92983058 92983058 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RUNX1T1 NM_001198679 exon11 c.T1544A p.V515E CGCTTCACCTCAT . 32.0 14.0 36.0 0.0 . 1196 RUNX1T1 862 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 92998408 92998408 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RUNX1T1 NM_001198679 exon9 c.G1400A p.S467N CTGCTACTGCCGC . 73.0 27.0 88.0 0.0 . 1196 RYR1 6261 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 19 39076640 39076640 + Nonsense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RYR1 NM_000540 exon103 c.G14866T p.E4956X GATATGGAGGTAG . 56.0 25.0 69.0 0.0 . 100 RYR2 6262 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 237872815 237872815 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RYR2 NM_001035 exon70 c.A10178T p.E3393V AAGCAGAGGAGCT . 36.0 25.0 68.0 0.0 . 158 RYR3 6263 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 33954785 33954785 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RYR3 NM_001243996 exon35 c.A5054T p.E1685V GCCCCGAGATTCC . 74.0 35.0 81.0 0.0 . 520 RYR3 6263 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 34080457 34080457 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RYR3 NM_001243996 exon67 c.C9628G p.L3210V CCCGACCTGCTGA . 95.0 47.0 99.0 0.0 . 520 RYR3 6263 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 34105180 34105180 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . RYR3 NM_001036 exon73 c.C10374T p.V3458V AGCTGTCTTCCAC . 57.0 36.0 65.0 0.0 . 520 S1PR5 53637 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 10624587 10624587 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . S1PR5 NM_030760 exon2 c.G1101A p.S367S CTGGGGCGATGAG . 36.0 18.0 33.0 0.0 . 523 S1PR5 53637 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 10625481 10625481 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . S1PR5 NM_030760 exon2 c.T207C p.A69A CATGGGAGCGTGG . 70.0 17.0 70.0 0.0 . 523 SAA1 6288 bcgsc.ca;mdanderson.org 37 11 18290840 18290840 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_1 WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SAA1 NM_199161 exon3 c.A190G p.K64E GCTGCCAAAAGGG . 63.0 27.0 145.0 0.0 . 650 SAA2 6289 broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 18267497 18267497 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SAA2 NM_030754 exon3 c.A190G p.K64E CCCTTTTGGCAGC . 122.0 35.0 248.0 0.0 . 514 SAGE1 55511 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 134993960 134993960 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SAGE1 NM_018666 exon18 c.A2369C p.N790T CCAAAAACTACAG . 75.0 68.0 84.0 0.0 . 133 SALL4 57167 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 50408636 50408636 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SALL4 NM_020436 exon2 c.G386T p.S129I TCCTTACTGCCGG . 47.0 13.0 64.0 1.0 . 92 SAMD15 161394 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 77844096 77844096 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SAMD15 NM_001010860 exon1 c.C335G p.S112C AAACATCCAGAGA . 61.0 24.0 85.0 0.0 . 90 SAMD3 154075 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 130497042 130497042 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SAMD3 NM_001017373 exon8 c.A766G p.T256A TCCTTGTCTGGCC . 71.0 24.0 77.0 0.0 . 91 SAMD9L 219285 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 92763730 92763730 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SAMD9L NM_152703 exon5 c.A1555G p.R519G TTTCTCTCTGCCA . 55.0 25.0 65.0 0.0 . 94 SASH1 23328 broad.mit.edu;bcgsc.ca 37 6 148864814 148864814 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SASH1 NM_015278 exon18 c.2210-2A>T . TCTCACAGGCAAG . 44.0 16.0 49.0 1.0 . 90 SASH1 23328 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 148848610 148848610 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SASH1 NM_015278 exon12 c.T1306C p.Y436H TTTGTGTACAAAG . 49.0 21.0 71.0 0.0 . 90 SCAF1 58506 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 50154181 50154181 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SCAF1 NM_021228 exon7 c.A535C p.T179P TTGGGCACGGGAG . 65.0 20.0 76.0 0.0 . 68 SCAPER 49855 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 77021006 77021006 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SCAPER NM_020843 exon16 c.G2095C p.E699Q GGGCTTCTTGTTC . 77.0 32.0 103.0 0.0 . 137 SCARF1 8578 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 17 1538573 1538573 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SCARF1 NM_003693 exon11 c.A1972C p.T658P GGCCAGTGGCTGA . 46.0 39.0 71.0 0.0 . 91 SCFD2 152579 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 54140025 54140025 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SCFD2 NM_152540 exon4 c.A1279T p.N427Y GAAAGTTGTCCCA . 90.0 35.0 106.0 1.0 . 93 SCFD2 152579 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 53786893 53786893 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SCFD2 NM_152540 exon6 c.A1706T p.Q569L CTTGCCTGGTGGG . 41.0 12.0 58.0 0.0 . 93 SCN1A 6323 ucsc.edu;bcgsc.ca 37 2 166901779 166901779 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SCN1A NM_001165964 exon10 c.T1436C p.L479P TCTGAGAGCCTGC . 59.0 6.0 64.0 0.0 . 147 SCN7A 6332 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 167298134 167298134 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SCN7A NM_002976 exon14 c.A1929G p.A643A GCCGAATGCAGCA . 176.0 80.0 231.0 1.0 . 67 SCNN1G 6340 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 23223399 23223399 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SCNN1G NM_001039 exon8 c.T1221C p.C407C GAAATGTGGGTGT . 43.0 16.0 49.0 1.0 . 158 SDCCAG8 10806 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 243433405 243433405 + Splice_Site SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SDCCAG8 NM_006642 exon2 c.68-2A>C . TCTTGCAGAACAT . 30.0 27.0 69.0 0.0 . 90 SDPR 8436 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 192711467 192711467 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SDPR NM_004657 exon1 c.T185A p.L62Q TTGTCCAGGAGCG . 77.0 38.0 90.0 0.0 . 92 SEC14L1 6397 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 75196640 75196640 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SEC14L1 NM_001204408 exon11 c.G894T p.M298I GATCATGTGTCAG . 60.0 25.0 92.0 0.0 . 92 SEC16B 89866 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 177906378 177906378 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SEC16B NM_033127 exon19 c.A2474G p.E825G ATTTCCTCCCAGA . 96.0 65.0 53.0 0.0 . 93 SEC24D 9871 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 119727008 119727008 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SEC24D NM_014822 exon7 c.A903G p.I301M GTCTTGTATCATG . 44.0 20.0 28.0 0.0 . 90 SELP 6403 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 169586539 169586539 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SELP NM_003005 exon3 c.A208T p.I70F TCTGGATGGCCAC . 210.0 34.0 107.0 0.0 . 94 SEMA3C 10512 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 7 80457899 80457899 + Splice_Site SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SEMA3C NM_006379 exon4 c.264+2T>C . AAACTTACACTCA . 127.0 49.0 130.0 0.0 . 515 SEMA3G 56920 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 52471561 52471561 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SEMA3G NM_020163 exon15 c.G1860T p.G620G CTCATCCCCTGGC . 131.0 69.0 149.0 0.0 . 70 SEMA3G 56920 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 52474434 52474434 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SEMA3G NM_020163 exon10 c.G1102T p.G368W AGGGCCCCCACTG . 44.0 17.0 51.0 0.0 . 70 SEMA4D 10507 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 92002518 92002518 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SEMA4D NM_006378 exon14 c.C1113G p.I371M GCTGTCGATGCAC . 83.0 10.0 94.0 0.0 . 92 SEMA4F 10505 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 2 74907007 74907007 + Nonsense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SEMA4F NM_004263 exon14 c.G1984T p.G662X GGGGCGGGACTGG . 57.0 22.0 70.0 0.0 . 93 SEMA6D 80031 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 48058822 48058822 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SEMA6D NM_020858 exon16 c.A1695G p.G565G TGAAGGATATGAA . 88.0 44.0 105.0 0.0 . 138 SEMA7A 8482 broad.mit.edu;bcgsc.ca 37 15 74708242 74708242 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SEMA7A NM_003612 exon8 c.A886G p.T296A TGTTGGTGGCAGC . 134.0 8.0 149.0 0.0 . 153 SEMA7A 8482 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 74707046 74707046 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SEMA7A NM_003612 exon10 c.A1136T p.Q379L GCCACCTGGAAGG . 61.0 37.0 79.0 0.0 . 153 SEMG2 6407 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 43851485 43851485 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SEMG2 NM_003008 exon2 c.T1212C p.N404N GGAAAATAAAATA . 105.0 45.0 109.0 0.0 . 91 SERPINB2 5055 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 61562574 61562574 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SERPINB2 NM_002575 exon3 c.T245C p.M82T GGTTCATGCAGCA . 75.0 24.0 69.0 0.0 . 226 SERPINB3 6317 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 61322962 61322962 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SERPINB3 NM_006919 exon8 c.C1102G p.P368A GGAAAGGGTGATT . 105.0 53.0 97.0 1.0 . 228 SETD4 54093 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 37408515 37408515 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SETD4 NM_017438 exon11 c.T1223C p.I408T TGGTTTATCAGGG . 86.0 35.0 100.0 0.0 . 154 SEZ6L2 26470 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 29906726 29906726 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SEZ6L2 NM_001243332 exon5 c.G707T p.G236V GGGGATCCCCCAC . 74.0 34.0 80.0 0.0 . 92 SEZ6L 23544 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 26688929 26688929 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SEZ6L NM_021115 exon2 c.A652T p.R218W CCCCAGAGGCCAG . 84.0 38.0 156.0 0.0 . 95 SF1 7536 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 64536751 64536751 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SF1 NM_001178030 exon7 c.G1098T p.K366N CTGCATCTTCCGT . 126.0 51.0 131.0 0.0 . 227 SFMBT2 57713 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 10 7213990 7213990 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SFMBT2 NM_001029880 exon19 c.T2282C p.V761A AGGGTGACGGCCC . 27.0 13.0 12.0 0.0 . 141 SFSWAP 6433 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 132239947 132239947 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SFSWAP NM_001261411 exon10 c.C1471T p.P491S CTGCAGCCGTGGC . 18.0 9.0 31.0 0.0 . 91 SGCB 6443 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 52890300 52890300 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SGCB NM_000232 exon6 c.T780G p.S260S CATCACAGATCCA . 84.0 34.0 80.0 0.0 . 90 SGCG 6445 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 13 23898515 23898515 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SGCG NM_000231 exon8 c.T711A p.L237L TGTGCTTGATGCT . 38.0 17.0 48.0 0.0 . 90 SGIP1 84251 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 67148048 67148048 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SGIP1 NM_032291 exon15 c.C1311T p.T437T GACCACCAGTGGT . 159.0 60.0 162.0 0.0 . 93 SGK1 6446 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 134638546 134638546 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SGK1 NM_001143676 exon1 c.A53G p.Q18R AAAAATTGGAAGG . 93.0 37.0 138.0 0.0 . 981 SH2D3C 10044 broad.mit.edu;ucsc.edu 37 9 130536280 130536280 + Silent SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SH2D3C NM_170600 exon2 c.G504C p.V168V TGAGTGCACGTCC . 32.0 4.0 80.0 0.0 . 228 SH3GL2 6456 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 17793437 17793437 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SH3GL2 NM_003026 exon8 c.T801A p.T267T TCCAACTGGAGAC . 121.0 61.0 135.0 0.0 . 91 SH3RF3 344558 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 110053581 110053581 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SH3RF3 NM_001099289 exon7 c.G1807T p.A603S AGCCAAGCCCGGA . 155.0 56.0 189.0 0.0 . 24 SH3RF3 344558 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 110259210 110259210 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SH3RF3 NM_001099289 exon10 c.A2611G p.T871A GGCCGCACAGGCC . 32.0 12.0 46.0 0.0 . 24 SH3TC2 79628 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 148406142 148406142 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SH3TC2 NM_024577 exon12 c.A3046T p.T1016S TGGCGGTATTTAG . 126.0 58.0 167.0 0.0 . 92 SHANK1 50944 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 51189492 51189492 + Splice_Site SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SHANK1 NM_016148 exon21 c.2577+2T>C . CCGCCTACCTCAG . 19.0 9.0 45.0 0.0 . 153 SHISA3 152573 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 42403330 42403330 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SHISA3 NM_001080505 exon2 c.C579A p.P193P ACCGCCCCCGCCA . 63.0 32.0 57.0 0.0 . 70 SHPRH 257218 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 146276324 146276324 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SHPRH NM_173082 exon2 c.A135T p.P45P TGAACCTGGGCAG . 35.0 14.0 55.0 0.0 . 92 SI 6476 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 164739156 164739156 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SI NM_001041 exon27 c.A3115G p.K1039E TCTTCTTTTGGGG . 91.0 41.0 106.0 0.0 . 104 SIDT2 51092 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 117054562 117054562 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SIDT2 NM_001040455 exon7 c.G770A p.G257E CCTGCGGGGGCTC . 44.0 21.0 81.0 0.0 . 90 SIGLEC11 114132 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 50453266 50453266 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SIGLEC11 NM_052884 exon11 c.T2058A p.L686L CAATTGAAGCCCA . 71.0 27.0 99.0 0.0 . 94 SIGLEC12 89858 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 52003208 52003208 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SIGLEC12 NM_053003 exon2 c.C774A p.N258K TATGTAGTTCCAT . 60.0 29.0 85.0 0.0 . 96 SIGLEC12 89858 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 52004872 52004872 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SIGLEC12 NM_053003 exon1 c.G116T p.C39F GAGACACACAGGC . 50.0 22.0 88.0 0.0 . 96 SIGLEC6 946 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 19 52023460 52023460 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SIGLEC6 NM_198846 exon6 c.A1062T p.X354C CCAGCCTCAGCAG . 49.0 17.0 73.0 0.0 . 91 SIGLEC8 27181 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 51958812 51958812 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SIGLEC8 NM_014442 exon4 c.C911T p.P304L CGTGAGGGGCACA . 46.0 26.0 73.0 0.0 . 94 SIGLECL1 284369 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 51768725 51768725 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_173635 exon3 c.A126T p.G42G GATGGGAGGAGTC . 87.0 34.0 116.0 0.0 . . SIPA1L1 26037 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 72200517 72200517 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SIPA1L1 NM_015556 exon19 c.A5059G p.K1687E GCTGCCAAAGCCT . 34.0 13.0 31.0 0.0 . 156 SIPA1L2 57568 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 232577103 232577103 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SIPA1L2 NM_020808 exon12 c.T3576A p.G1192G ATAGGAACCCAGG . 20.0 20.0 32.0 0.0 . 95 SIRPB1 10326 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 1551660 1551660 + Missense_Mutation SNP A A T rs201191774 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SIRPB1 NM_006065 exon4 c.T875A p.V292E CGGGACACATTTC . 145.0 40.0 96.0 0.0 A|1.000;G|0.000 91 SIRT6 51548 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 4175099 4175099 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SIRT6 NM_016539 exon7 c.A664T p.S222C TCCCGCTGGGCCG . 35.0 19.0 58.0 0.0 . 227 SIX2 10736 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 45235999 45235999 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SIX2 NM_016932 exon1 c.A251T p.Q84L AGCTGCTGCAGCT . 47.0 17.0 48.0 0.0 . 91 SKIV2L 6499 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 6 31935153 31935153 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SKIV2L NM_006929 exon21 c.A2582T p.Q861L TCCTACAGGTGAG . 108.0 46.0 83.0 0.0 . 290 SLAMF1 6504 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 160582368 160582368 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLAMF1 NM_003037 exon6 c.T867C p.P289P CTGAAGAGGCTAC . 101.0 67.0 40.0 0.0 . 154 SLC12A3 6559 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 56936357 56936357 + Missense_Mutation SNP C C A rs13306666 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC12A3 NM_000339 exon24 c.C2820A p.N940K TGTCAACGAGATG . 27.0 24.0 89.0 0.0 C|0.998;T|0.002 155 SLC12A5 57468 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 44684872 44684872 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC12A5 NM_001134771 exon22 c.A2940G p.E980E CCCAGAAGAGACG . 88.0 33.0 99.0 0.0 . 156 SLC12A7 10723 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 1053467 1053467 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC12A7 NM_006598 exon23 c.A3157T p.N1053Y TACAGTTCTCGTC . 58.0 25.0 78.0 0.0 . 138 SLC13A4 26266 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 135378973 135378973 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC13A4 NM_012450 exon10 c.T1030A p.C344S GAGAGCAGGTCTC . 53.0 29.0 31.0 0.0 . 90 SLC16A12 387700 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 91198482 91198482 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC16A12 NM_213606 exon6 c.T907C p.Y303H CCAAGTACACAAA . 60.0 41.0 119.0 0.0 . 69 SLC16A14 151473 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 230911189 230911189 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC16A14 NM_152527 exon4 c.C653A p.P218Q TCGTTTGGGTTTT . 107.0 51.0 114.0 0.0 . 96 SLC18A2 6571 broad.mit.edu;bcgsc.ca 37 10 119029609 119029609 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC18A2 NM_003054 exon14 c.T1214C p.I405T TGCCTATCATGGG . 76.0 6.0 106.0 0.0 . 90 SLC1A6 6511 broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 15065125 15065125 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC1A6 NM_005071 exon7 c.A1186G p.I396V AGGTGATGGGCAG . 19.0 11.0 29.0 0.0 . 186 SLC1A6 6511 ucsc.edu;bcgsc.ca;mdanderson.org 37 19 15065140 15065140 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC1A6 NM_005071 exon7 c.T1171A p.S391T TTGCCGAGCTGGG . 16.0 6.0 26.0 0.0 . 186 SLC22A12 116085 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 11 64359432 64359432 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC22A12 NM_001276326 exon1 c.402+2T>A . CCAAGGTAGGGCC . 21.0 11.0 28.0 0.0 . 91 SLC22A8 9376 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 62763203 62763203 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC22A8 NM_001184732 exon7 c.G974A p.R325H GTCATGCGGCGCA . 65.0 28.0 107.0 0.0 . 93 SLC23A2 9962 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 4913132 4913132 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC23A2 NM_203327 exon3 c.A77T p.E26V TTTGCCTCGTCTT . 83.0 30.0 81.0 0.0 . 92 SLC26A4 5172 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 107329628 107329628 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC26A4 NM_000441 exon9 c.A1132C p.T378P GATTACACCATCG . 68.0 24.0 90.0 1.0 . 96 SLC26A7 115111 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 92401631 92401631 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC26A7 NM_134266 exon16 c.T1741A p.F581I TTTACCTTTTTTG . 71.0 34.0 113.0 0.0 . 92 SLC26A9 115019 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 205884091 205884091 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC26A9 NM_134325 exon22 c.T2593C p.Y865H GCTTGTACAGCAG . 40.0 35.0 110.0 0.0 . 92 SLC26A9 115019 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 205897161 205897161 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC26A9 NM_134325 exon9 c.T970A p.S324T CAGGCGACACCGG . 32.0 28.0 58.0 0.0 . 92 SLC29A4 222962 hgsc.bcm.edu;broad.mit.edu;mdanderson.org 37 7 5336593 5336593 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC29A4 NM_153247 exon7 c.A646G p.S216G TCTCTGAGCCGCA . 24.0 10.0 18.0 0.0 . 515 SLC2A4 6517 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 7189182 7189182 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC2A4 NM_001042 exon10 c.C1281T p.N427N CTCCAACTGGACG . 50.0 44.0 111.0 0.0 . 90 SLC30A5 64924 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 68423913 68423913 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC30A5 NM_022902 exon15 c.A2081G p.H694R CAATTCATATACA . 66.0 27.0 73.0 0.0 . 226 SLC34A1 6569 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 176814993 176814993 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC34A1 NM_001167579 exon7 c.645-2A>T . CTGCCCAGGGCCT . 48.0 27.0 69.0 0.0 . 91 SLC34A3 142680 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 9 140127698 140127698 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC34A3 NM_001177317 exon7 c.T598A p.W200R TTCAACTGGCTCA . 26.0 22.0 59.0 0.0 . 90 SLC35D3 340146 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 137245642 137245642 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC35D3 NM_001008783 exon2 c.T1059A p.G353G AGCAGGTGGCCCC . 39.0 14.0 51.0 0.0 . 91 SLC35F2 54733 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 107673871 107673871 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC35F2 NM_017515 exon7 c.C795A p.F265L TGCCACGAACAGC . 191.0 77.0 242.0 0.0 . 90 SLC36A2 153201 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 150704910 150704910 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC36A2 NM_181776 exon8 c.T947A p.L316Q TAGCCCAGAGCCG . 40.0 17.0 69.0 0.0 . 91 SLC36A4 120103 ucsc.edu;bcgsc.ca 37 11 92899082 92899082 + Splice_Site SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC36A4 NM_152313 exon9 c.867+2T>C . ATTCTTACCACTC . 26.0 4.0 32.0 0.0 . 93 SLC38A2 54407 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 46760941 46760941 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC38A2 NM_018976 exon6 c.A399G p.L133L TTCATATAATAAA . 150.0 16.0 183.0 0.0 . 226 SLC39A12 221074 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 18250689 18250689 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC39A12 NM_152725 exon3 c.A441C p.L147L CAGCCTACTGAGC . 129.0 60.0 133.0 0.0 . 154 SLC45A1 50651 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 8390821 8390821 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC45A1 NM_001080397 exon4 c.A1268T p.E423V GCAGAGAGGGTGC . 73.0 23.0 98.0 0.0 . 494 SLC4A10 57282 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 162813739 162813739 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC4A10 NM_001178015 exon20 c.A2782T p.S928C ATGACCAGTATTC . 82.0 29.0 101.0 0.0 . 229 SLC4A8 9498 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 51865212 51865212 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC4A8 NM_001039960 exon14 c.A1800G p.L600L CTCCCTAATTTGC . 59.0 23.0 61.0 0.0 . 95 SLC52A2 79581 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 145584307 145584307 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_024531 exon4 c.G1059A p.L353L CTACCTGATGGCG . 18.0 10.0 18.0 0.0 . . SLC52A3 113278 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 744623 744623 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_033409 exon3 c.G592T p.A198S GGAGGGCGGACAC . 63.0 17.0 52.0 0.0 . . SLC5A8 160728 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 12 101551063 101551063 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC5A8 NM_145913 exon15 c.T1827A p.R609R TCACAAACGAGTC . 73.0 8.0 101.0 0.0 . 90 SLC6A3 6531 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 1414820 1414820 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC6A3 NM_001044 exon8 c.A1142G p.D381G GCCACGTCCCCGA . 40.0 18.0 56.0 0.0 . 157 SLC7A13 157724 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 87229922 87229922 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLC7A13 NM_138817 exon3 c.A956T p.Q319L CCCTCTTGGCTTG . 116.0 55.0 134.0 0.0 . 90 SLC9B1 150159 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 4 103822469 103822469 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_139173 exon12 c.T1353A p.A451A TTCTAGAGCCAGA . 202.0 49.0 213.0 0.0 . . SLC9C1 285335 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 111888053 111888053 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_183061 exon24 c.A3042G p.L1014L ATAAGATAAGTGT . 75.0 28.0 68.0 0.0 . . SLIT2 9353 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 20591288 20591288 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLIT2 NM_004787 exon30 c.T3110A p.L1037Q AGAAGCTGGACTT . 86.0 34.0 96.0 0.0 . 521 SLITRK2 84631 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 144904336 144904336 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLITRK2 NM_001144005 exon5 c.A393T p.L131L CTTCCTAGGCCTG . 58.0 52.0 102.0 0.0 . 136 SLITRK5 26050 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 88330290 88330290 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SLITRK5 NM_015567 exon2 c.A2647C p.S883R CCGTGCAGCCCCG . 132.0 58.0 139.0 0.0 . 94 SMARCA4 6597 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 11101907 11101907 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SMARCA4 NM_003072 exon8 c.A1327C p.K443Q CGCAGCAAGCGCC . 90.0 33.0 94.0 0.0 . 1523 SMARCC1 6599 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 47651729 47651729 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SMARCC1 NM_003074 exon26 c.A2870G p.Q957R TCCATTTGCTGTC . 65.0 31.0 64.0 0.0 . 228 SMOX 54498 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 4168039 4168039 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SMOX NM_001270691 exon8 c.C1743T p.F581F CCTCTTCCAGCAG . 72.0 33.0 107.0 0.0 . 153 SMPD4 55627 broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 130918769 130918769 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SMPD4 NM_017951 exon11 c.A1058G p.H353R TAGGCGTGGAGGG . 137.0 51.0 201.0 1.0 . 90 SMPD4 55627 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 130939136 130939136 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SMPD4 NM_017751 exon1 c.A39T p.P13P CAGAGATGGAAGC . 63.0 32.0 82.0 0.0 . 90 SNAPC3 6619 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 9 15447091 15447091 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SNAPC3 NM_001039697 exon5 c.583-2A>T . ACTTTTAGCACAA . 132.0 57.0 121.0 0.0 . 186 SNCAIP 9627 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 121780395 121780395 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SNCAIP NM_005460 exon8 c.T1560C p.S520S GGCCTCTCAAGTG . 80.0 29.0 113.0 0.0 . 92 SND1-IT1 27099 ucsc.edu;mdanderson.org 37 7 127638003 127638003 + RNA SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . . TCCCACAGCACCC . 76.0 41.0 79.0 0.0 . . SNRK 54861 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 43389366 43389366 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SNRK NM_017719 exon7 c.A1615G p.S539G AGCTGCAGTAGTT . 158.0 80.0 176.0 0.0 . 815 SNRNP200 23020 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 96966755 96966755 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SNRNP200 NM_014014 exon5 c.A611G p.Q204R TCAAACTGCACAT . 132.0 53.0 119.0 0.0 . 162 SNX19 399979 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 130748331 130748331 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SNX19 NM_014758 exon11 c.G2965T p.G989C AGACACCCATCCT . 81.0 40.0 116.0 0.0 . 229 SNX8 29886 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 2317782 2317782 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SNX8 NM_013321 exon2 c.A253G p.K85E CCTTCTTCTCCGG . 64.0 25.0 76.0 0.0 . 290 SOAT2 8435 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 53515148 53515148 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SOAT2 NM_003578 exon12 c.A1199G p.D400G TCCATGACTGGCT . 92.0 34.0 91.0 0.0 . 91 SOGA1 140710 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 20 35406236 35406236 + Splice_Site SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_199181 exon16 c.2994-2A>G . TCTGGCTCTCTTC . 53.0 15.0 58.0 0.0 . . SOGA1 140710 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 20 35423004 35423004 + Splice_Site SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_199181 exon15 c.2769-2A>T . TGGTTCTGCGAAG . 66.0 35.0 77.0 0.0 . . SOGA3 387104 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 127837007 127837007 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001012279 exon2 c.A753T p.K251N TCCTTCTTTCCAG . 38.0 19.0 27.0 0.0 . . SORCS2 57537 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 7730109 7730109 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SORCS2 NM_020777 exon22 c.A2902G p.K968E TTTTCCAAGGAGC . 47.0 18.0 72.0 0.0 . 91 SOX30 11063 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 157065688 157065688 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SOX30 NM_178424 exon4 c.A1430T p.Q477L GGGCTCTGGACTG . 55.0 29.0 71.0 0.0 . 91 SPAM1 6677 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 123593884 123593884 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPAM1 NM_153189 exon3 c.G260T p.G87V GGCAAGGTGTTAC . 89.0 43.0 105.0 0.0 . 94 SPATA16 83893 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 172643281 172643281 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPATA16 NM_031955 exon7 c.T1083A p.D361E TTGAAGATCTGAA . 163.0 75.0 201.0 0.0 . 94 SPATA31E1 286234 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 90501957 90501957 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_178828 exon4 c.T2555C p.L852P CAGACCTCCAGTC . 63.0 21.0 79.0 0.0 . . SPATA5 166378 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 123859404 123859404 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPATA5 NM_145207 exon8 c.A1458T p.S486S TGGTTCAGTAAGT . 52.0 17.0 80.0 0.0 . 90 SPATA6 54558 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 48764441 48764441 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPATA6 NM_019073 exon13 c.A1411T p.R471W AGTTCCTGTACAT . 79.0 23.0 111.0 0.0 . 91 SPEF2 79925 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 35709050 35709050 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPEF2 NM_024867 exon19 c.T2666A p.V889D TTGAAGTTGAGAA . 218.0 81.0 243.0 0.0 . 26 SPEG 10290 broad.mit.edu;mdanderson.org 37 2 220313082 220313082 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPEG NM_005876 exon4 c.T1202A p.L401Q GCATCCTGGACAA . 20.0 8.0 25.0 0.0 . 383 SPEG 10290 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 220342465 220342465 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPEG NM_005876 exon21 c.G4784T p.R1595M GAGGAAGGAGACT . 75.0 29.0 91.0 0.0 . 383 SPOP 8405 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 47679227 47679227 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPOP NM_001007228 exon9 c.A980G p.Y327C ACTCACTAGTTGA . 76.0 37.0 99.0 0.0 . 660 SPOP 8405 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 47699405 47699405 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPOP NM_001007228 exon3 c.A103T p.M35L TCCACATGTAGGA . 120.0 55.0 148.0 0.0 . 660 SPP2 6694 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 2 234978570 234978570 + Splice_Site SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPP2 NM_006944 exon7 c.551-2A>G . ATCTTTAGGGATC . 71.0 37.0 72.0 0.0 . 90 SPRR1A 6698 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 152957864 152957864 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPRR1A NM_001199828 exon2 c.T158C p.V53A CCAAAGTGCCTGA . 215.0 163.0 115.0 1.0 . 68 SPRR2F 6705 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 153085091 153085091 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPRR2F NM_001014450 exon2 c.A119G p.K40R GGACACTTTGATG . 83.0 9.0 52.0 0.0 . 68 SPRR4 163778 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 1 152944426 152944426 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPRR4 NM_173080 exon2 c.G60T p.Q20H CCAGCAGCAGCAA . 282.0 224.0 148.0 0.0 . 68 SPSB4 92369 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 140785585 140785585 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPSB4 NM_080862 exon2 c.G639T p.V213V GGTGGTGAGTGCC . 77.0 43.0 81.0 0.0 . 226 SPTA1 6708 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 158627334 158627334 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPTA1 NM_003126 exon19 c.C2738T p.T913I ATCCATGTTTCTG . 162.0 41.0 85.0 0.0 . 142 SPTB 6710 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 65267543 65267543 + Silent SNP A A G rs115882528 byfrequency TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPTB NM_001024858 exon7 c.T807C p.Y269Y CACCACATAGGTG . 110.0 47.0 134.0 0.0 A|0.998;G|0.002 100 SPTBN1 6711 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 54874335 54874335 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SPTBN1 NM_003128 exon24 c.C4934A p.A1645E ACTATGCAGAGAC . 58.0 26.0 77.0 0.0 . 140 SRGAP3 9901 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 9068619 9068619 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SRGAP3 NM_014850 exon13 c.G1600A p.G534R GCTTACCATATAA . 67.0 26.0 87.0 0.0 . 344 SRGAP3 9901 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 9068641 9068641 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SRGAP3 NM_014850 exon13 c.C1578G p.C526W ACGGATGCAGCTC . 66.0 27.0 92.0 0.0 . 344 SRRM1 10250 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 24996026 24996026 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SRRM1 NM_005839 exon14 c.A2152G p.T718A CCAAGTACTAGGC . 243.0 115.0 327.0 0.0 . 93 SRRM4 84530 broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 119594391 119594391 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SRRM4 NM_194286 exon13 c.A1624T p.S542C AGCAGTAGCCGCT . 109.0 53.0 136.0 1.0 . 2 SRRM4 84530 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 119568581 119568581 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SRRM4 NM_194286 exon8 c.C713A p.S238Y CCCAGTCCAGTCG . 25.0 7.0 21.0 0.0 . 2 SRRM4 84530 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 119588876 119588876 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SRRM4 NM_194286 exon10 c.C1131A p.V377V TTTGGTCCCATCC . 92.0 42.0 86.0 0.0 . 2 SRXN1 140809 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 633625 633625 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SRXN1 NM_080725 exon1 c.A205T p.I69F CCCGGATCGTGTC . 32.0 10.0 21.0 0.0 . 91 SSMEM1 0 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 129847933 129847933 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_145268 exon1 c.G183T p.W61C TGTCTGGGTAGGA . 70.0 37.0 57.0 0.0 . . SSUH2 51066 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 3 8661623 8661623 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001256748 exon12 c.T1059A p.Y353X AGTGCCATAGATG . 96.0 38.0 131.0 0.0 . . STAB1 23166 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 3 52538054 52538054 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . STAB1 NM_015136 exon10 c.A1033T p.R345W GTGTGCAGGGAAA . 52.0 27.0 56.0 0.0 . 139 STAB2 55576 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 104107485 104107485 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . STAB2 NM_017564 exon42 c.C4476A p.T1492T AACCACCCCAGGA . 93.0 36.0 89.0 0.0 . 104 STAC 6769 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 36534678 36534678 + Silent SNP T T C rs199675015 TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . STAC NM_003149 exon6 c.T723C p.N241N AGCCAATGGGCCA . 69.0 36.0 100.0 0.0 T|0.999;C|0.001 94 STAP2 55620 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 4333984 4333984 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . STAP2 NM_001013841 exon2 c.A160T p.N54Y CCCGATTGCTATT . 67.0 36.0 65.0 0.0 . 90 STC2 8614 broad.mit.edu;ucsc.edu;mdanderson.org 37 5 172744894 172744894 + Nonsense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . STC2 NM_003714 exon4 c.G865T p.E289X CCCACTCGCTGCT . 49.0 22.0 76.0 2.0 . 93 STIL 6491 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 47717102 47717102 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . STIL NM_001048166 exon17 c.A3573G p.A1191A CGTATCTGCGTTG . 85.0 44.0 97.0 0.0 . 659 STK4 6789 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 43607128 43607128 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . STK4 NM_006282 exon3 c.A161T p.Q54L CCGGCCAGATTGT . 60.0 24.0 72.0 0.0 . 767 STON1 11037 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 2 48808054 48808054 + Frame_Shift_Del DEL C C - novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . STON1 NM_001198595 exon3 c.282delC p.I94fs TGGCATCCCCAAA . 111.0 50.0 134.0 0.0 . 91 STRC 161497 broad.mit.edu;bcgsc.ca;mdanderson.org 37 15 43900119 43900119 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . STRC NM_153700 exon18 c.T3736G p.W1246G TTGTCCATTCTGG . 314.0 128.0 344.0 0.0 . 90 STT3A 3703 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 125489978 125489978 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . STT3A NM_152713 exon17 c.A2036G p.E679G TCCTGGAGGAAGC . 84.0 32.0 98.0 0.0 . 90 STX16 8675 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 57246218 57246218 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . STX16 NM_001001433 exon7 c.A657G p.T219T TTTTACAGAGGAC . 72.0 27.0 87.0 0.0 . 91 STX6 10228 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 180953835 180953835 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . STX6 NM_005819 exon7 c.A669G p.A223A TACTTTTGCAAGT . 114.0 74.0 73.0 0.0 . 91 STXBP3 6814 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 109321954 109321954 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . STXBP3 NM_007269 exon9 c.C731A p.P244H TTGATCCTGTGTC . 96.0 42.0 90.0 0.0 . 93 STXBP5L 9515 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 3 120871322 120871322 + Splice_Site SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . STXBP5L NM_014980 exon8 c.670-2A>G . TTTTCCAGCTGCT . 47.0 20.0 72.0 0.0 . 77 SUGT1 10910 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 13 53227239 53227239 + Splice_Site SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SUGT1 NM_001130912 exon2 c.96+1G>A . TTAGAGGTGAGAG . 69.0 23.0 84.0 0.0 . 226 SUN2 25777 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 39137564 39137564 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SUN2 NM_001199579 exon10 c.G1144A p.A382T TCAGGGCAGACAG . 19.0 7.0 32.0 0.0 . 154 SUPV3L1 6832 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 10 70968759 70968759 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SUPV3L1 NM_003171 exon15 c.A2329T p.R777X GGGACGAGAAGAA . 56.0 20.0 56.0 0.0 . 227 SUSD2 56241 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 24584255 24584255 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SUSD2 NM_019601 exon14 c.G2404A p.A802T GCGGTTGCGCTCG . 31.0 18.0 36.0 0.0 . 91 SUV39H1 6839 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 X 48558575 48558575 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SUV39H1 NM_003173 exon3 c.A259T p.K87X ATCCTCAAGCAGT . 115.0 104.0 135.0 1.0 . 226 SYDE2 84144 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 85647970 85647970 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SYDE2 NM_032184 exon3 c.A2355G p.R785R AAGACCTCTAGGT . 181.0 10.0 209.0 0.0 . 70 SYN2 6854 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 12209886 12209886 + RNA SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SYN2 . . . . AAACTGTGGGTGG . 72.0 31.0 94.0 1.0 . 24 SYN3 8224 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 32914296 32914296 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SYN3 NM_003490 exon12 c.T1344C p.P448P GGGCTGAGGAGAC . 25.0 12.0 22.0 0.0 . 92 SYNE1 23345 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 152831366 152831366 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SYNE1 NM_033071 exon8 c.G564A p.K188K AGCCTTCTTAGCA . 101.0 9.0 129.0 0.0 . 607 SYNE1 23345 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 152555815 152555815 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SYNE1 NM_182961 exon111 c.A20517G p.L6839L AGCATTTAGATGA . 69.0 31.0 97.0 0.0 . 607 SYNPO2 171024 broad.mit.edu;ucsc.edu;bcgsc.ca 37 4 119953093 119953093 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SYNPO2 NM_001128934 exon4 c.A3163T p.T1055S ATTCCCACCTCGC . 112.0 53.0 173.0 1.0 . 92 SYNPO2L 79933 broad.mit.edu;bcgsc.ca;mdanderson.org 37 10 75407619 75407619 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SYNPO2L NM_001114133 exon4 c.T1791A p.P597P TGGGGCAGGCGCC . 57.0 22.0 59.0 1.0 . 91 SYT10 341359 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 33532888 33532888 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SYT10 NM_198992 exon6 c.A1379G p.H460R TCATTGTGTCCTA . 68.0 35.0 93.0 0.0 . 92 SYT11 23208 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 155838371 155838371 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SYT11 NM_152280 exon2 c.A650G p.K217R TGCGGAAGACCCT . 219.0 72.0 144.0 0.0 . 92 SYT5 6861 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 55689571 55689571 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SYT5 NM_003180 exon3 c.T245C p.I82T TTGTCTATGTAAC . 21.0 13.0 37.0 0.0 . 90 SYTL2 54843 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 85436399 85436399 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SYTL2 NM_206927 exon1 c.C1101A p.P367P ATCCTGGGGAAAA . 53.0 29.0 58.0 0.0 . 137 SZT2 23334 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 43907744 43907744 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SZT2 NM_015284 exon55 c.C7645T p.R2549W GCTGAGCGGCATC . 83.0 10.0 103.0 0.0 . 144 SZT2 23334 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 43908181 43908181 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . SZT2 NM_015284 exon57 c.G7872T p.L2624L TCGCCTGGTGCAG . 67.0 28.0 66.0 0.0 . 144 T 6862 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 6 166578331 166578331 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . T NM_003181 exon5 c.A625T p.K209X TGTACTTAATTTT . 59.0 34.0 108.0 0.0 . 516 TAC3 6866 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 57407370 57407370 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TAC3 NM_013251 exon3 c.C200A p.A67D GTGCTAGCCTGGC . 43.0 19.0 48.0 0.0 . 92 TAF4B 6875 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 23854702 23854702 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TAF4B NM_005640 exon4 c.T673C p.S225P AAGCCTTCAAGTT . 164.0 71.0 186.0 0.0 . 71 TAGAP 117289 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 159463252 159463252 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TAGAP NM_138810 exon5 c.T173G p.L58R CAGGACAGCACCT . 105.0 39.0 131.0 0.0 . 91 TANC2 26115 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 61432399 61432399 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TANC2 NM_025185 exon12 c.G2008T p.V670L TATCTAGTGTTAA . 91.0 42.0 108.0 1.0 . 24 TARSL2 123283 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 102252089 102252089 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TARSL2 NM_152334 exon5 c.A806G p.E269G CTGTCTTCAATGA . 67.0 15.0 74.0 0.0 . 92 TAS1R1 80835 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 6639185 6639185 + Silent SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TAS1R1 NM_138697 exon6 c.C2067T p.A689A AGCGGCCCAGCTG . 92.0 62.0 113.0 0.0 . 516 TAS2R7 50837 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 10954328 10954328 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TAS2R7 NM_023919 exon1 c.A842G p.H281R AATGAATGACTTG . 104.0 43.0 133.0 0.0 . 91 TAX1BP1 8887 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 27833956 27833956 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TAX1BP1 NM_006024 exon11 c.T1425C p.N475N TAATAATGTCTTC . 221.0 94.0 224.0 0.0 . 153 TBC1D22A 25771 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 47189485 47189485 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TBC1D22A NM_014346 exon3 c.C207A p.S69R TACCAGCGATGCC . 66.0 37.0 82.0 0.0 . 91 TBCD 6904 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 80887026 80887026 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TBCD NM_005993 exon31 c.A2731T p.S911C CAGGCCAGTGAGA . 18.0 15.0 32.0 0.0 . 22 TBCK 93627 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 107154797 107154797 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TBCK NM_001163436 exon16 c.A1460T p.H487L TTGGCATGAATAG . 244.0 117.0 281.0 0.0 . 336 TBL3 10607 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 2026270 2026270 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TBL3 NM_006453 exon13 c.A1247T p.Q416L TGGCTCAGGGTTC . 63.0 29.0 87.0 0.0 . 90 TCF7 6932 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 133451714 133451714 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TCF7 NM_003202 exon3 c.A431T p.Q144L AGCCGCAGCCCCC . 76.0 35.0 149.0 0.0 . 90 TCHH 7062 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 152084202 152084202 + Silent SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TCHH NM_007113 exon3 c.C1491A p.R497R CTGCTCGCGCCTC . 48.0 11.0 23.0 0.0 . 72 TCP11L2 255394 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 106734764 106734764 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TCP11L2 NM_152772 exon9 c.T1303A p.W435R CCTATCTGGTCCT . 66.0 39.0 81.0 0.0 . 93 TCTE1 202500 broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 44253945 44253945 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TCTE1 NM_182539 exon3 c.A602G p.Q201R GGGAGCTGCACCG . 40.0 14.0 46.0 1.0 . 94 TCTN1 79600 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 111066600 111066600 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TCTN1 NM_024549 exon4 c.A501G p.P167P TAATCCAGAAGTA . 43.0 23.0 47.0 0.0 . 90 TDRD1 56165 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 115947807 115947807 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TDRD1 NM_198795 exon2 c.A217T p.T73S GAGCAAACCAAAC . 97.0 83.0 178.0 1.0 . 90 TEKT2 27285 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 36551473 36551473 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TEKT2 NM_014466 exon4 c.A319T p.N107Y GCCAAGAACCTGC . 115.0 43.0 154.0 0.0 . 90 TELO2 9894 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 1551726 1551726 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TELO2 NM_016111 exon11 c.G1424A p.G475D TGGATGGCGGCGT . 20.0 11.0 25.0 0.0 . 90 TENM3 55714 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 183549876 183549876 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001080477 exon4 c.A822T p.A274A AATGGCATCTGGC . 102.0 73.0 268.0 0.0 . . TENM4 26011 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 78614413 78614413 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001098816 exon7 c.G649C p.D217H AGTGGTCCGTGGG . 19.0 10.0 39.0 0.0 . . TEP1 7011 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 14 20871535 20871535 + Splice_Site SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TEP1 NM_007110 exon8 c.1266+1G>T . GACTCACCTTTCT . 106.0 51.0 121.0 0.0 . 95 TEP1 7011 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 20851687 20851687 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TEP1 NM_007110 exon26 c.G3827T p.G1276V AGCTGCCCATTCT . 91.0 47.0 99.0 0.0 . 95 TERT 7015 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 1254534 1254534 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TERT NM_198253 exon15 c.C3244T p.L1082L GAGTCAGCTTGAG . 56.0 25.0 78.0 0.0 . 1272 TET1 80312 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 70332525 70332525 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TET1 NM_030625 exon2 c.A430G p.I144V TATAAGATACTCC . 55.0 41.0 78.0 0.0 . 663 TFAP2D 83741 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 50712859 50712859 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TFAP2D NM_172238 exon6 c.G923T p.C308F ACACTTGTGAAAC . 203.0 91.0 179.0 0.0 . 159 TFCP2 7024 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 51492562 51492562 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TFCP2 NM_001173452 exon13 c.T1416C p.D472D TACCTCATCACTG . 55.0 24.0 46.0 0.0 . 91 TGM7 116179 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 15 43571862 43571862 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TGM7 NM_052955 exon10 c.T1639G p.W547G GCCTCCAGAAGGG . 37.0 11.0 49.0 0.0 . 92 THEG 51298 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 362299 362299 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . THEG NM_016585 exon8 c.C1041T p.G347G GTTGAGGCCCTTG . 54.0 20.0 96.0 0.0 . 91 THEMIS 387357 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 128150865 128150865 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . THEMIS NM_001010923 exon3 c.A465C p.A155A ATTCCTTGCTACT . 74.0 33.0 109.0 0.0 . 94 TIGD4 201798 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 153691590 153691590 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TIGD4 NM_145720 exon2 c.T567C p.Y189Y CATTCGATAAAGC . 108.0 48.0 160.0 0.0 . 91 TIMELESS 8914 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 56827889 56827889 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TIMELESS NM_003920 exon2 c.A66G p.G22G AGTGTCTCCCTCC . 96.0 38.0 147.0 0.0 . 159 TK1 7083 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 76170929 76170929 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TK1 NM_003258 exon7 c.T616C p.C206R CTGGGCAGTTCTC . 49.0 22.0 65.0 0.0 . 227 TLL2 7093 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 98145897 98145897 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TLL2 NM_012465 exon15 c.A1928C p.N643T TTTTTGTTTGTGG . 31.0 19.0 59.0 0.0 . 93 TLN1 7094 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 35724956 35724956 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TLN1 NM_006289 exon4 c.G229T p.D77Y TAGTGTCCTGTTA . 62.0 21.0 86.0 0.0 . 609 TLN2 83660 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 63102125 63102125 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TLN2 NM_015059 exon49 c.A6665C p.Q2222P TCCAGCAAGCATC . 88.0 46.0 119.0 0.0 . 573 TLR10 81793 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 38774823 38774823 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TLR10 NM_001017388 exon2 c.G2389C p.E797Q GAGACTCTTCATT . 74.0 20.0 76.0 0.0 . 522 TLR4 7099 broad.mit.edu;ucsc.edu 37 9 120475741 120475741 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TLR4 NM_138554 exon3 c.A1335T p.S445S CCTATCACTCAGA . 37.0 4.0 94.0 0.0 . 577 TLR7 51284 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 12905637 12905637 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TLR7 NM_016562 exon3 c.T2010G p.F670L AGTTTTTGATGGT . 46.0 32.0 61.0 0.0 . 564 TLR8 51311 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 12939723 12939723 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TLR8 NM_138636 exon2 c.A2564T p.D855V ACTGGGATGTTTG . 42.0 39.0 57.0 1.0 . 629 TLR8 51311 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 12938413 12938413 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TLR8 NM_138636 exon2 c.C1254A p.S418S TTTCTCCAATCTG . 40.0 38.0 55.0 0.0 . 629 TMC7 79905 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 19033071 19033071 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMC7 NM_024847 exon4 c.A581G p.Y194C CGAAATACAAGAT . 103.0 37.0 109.0 0.0 . 93 TMEM105 284186 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 79287489 79287489 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMEM105 NM_178520 exon3 c.G352A p.G118R ACAGCCCCTTCAT . 65.0 52.0 138.0 0.0 . 91 TMEM108 66000 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 132948183 132948183 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMEM108 NM_023943 exon3 c.T28C p.C10R CTCTATTGCCAAC . 44.0 14.0 60.0 0.0 . 94 TMEM108 66000 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 133099726 133099726 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMEM108 NM_023943 exon4 c.A1171T p.R391W CCCTCCAGGGTCT . 66.0 29.0 69.0 0.0 . 94 TMEM132D 121256 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 130184613 130184613 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMEM132D NM_133448 exon2 c.G710T p.G237V CAGTCCCCTCTCT . 97.0 39.0 81.0 0.0 . 106 TMEM144 55314 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 159174638 159174638 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMEM144 NM_018342 exon13 c.A997G p.I333V TGCATCATCTTGA . 43.0 15.0 55.0 0.0 . 90 TMEM161A 54929 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 19243552 19243552 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMEM161A NM_001256766 exon4 c.G200A p.G67D CTAAGGCCATTGG . 86.0 35.0 98.0 0.0 . 154 TMEM168 64418 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 112407617 112407617 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMEM168 NM_022484 exon5 c.A1729G p.I577V CTTCAATATCTAC . 84.0 27.0 122.0 0.0 . 91 TMEM211 255349 broad.mit.edu;bcgsc.ca 37 22 25331454 25331454 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMEM211 NM_001001663 exon3 c.T236A p.L79Q CAACCCAGCCGGC . 129.0 7.0 184.0 0.0 . 68 TMEM211 255349 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 25334135 25334135 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMEM211 NM_001001663 exon2 c.A108T p.P36P CACCCCTGGCATT . 29.0 9.0 32.0 0.0 . 68 TMEM211 255349 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 25334227 25334227 + Missense_Mutation SNP A A T rs112354981 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMEM211 NM_001001663 exon2 c.T16A p.W6R GGAGCCAGCCTCC . 33.0 16.0 26.0 0.0 A|0.500;G|0.500 68 TMEM222 84065 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 27648780 27648780 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMEM222 NM_032125 exon1 c.A92T p.E31V CGGCCGAGACGGA . 182.0 101.0 196.0 0.0 . 90 TMEM232 642987 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 109904164 109904164 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001039763 exon11 c.C1439T p.A480V TTGATTGCATTTT . 82.0 15.0 113.0 0.0 . . TMEM247 388946 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 46706740 46706740 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001145051 exon1 c.A16G p.R6G GAGGACAGGGAGA . 102.0 42.0 119.0 0.0 . . TMEM252 169693 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 71155621 71155621 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_153237 exon1 c.A110T p.Q37L CTCCCCTGACAGT . 168.0 57.0 114.0 0.0 . . TMEM55B 90809 broad.mit.edu;mdanderson.org 37 14 20929468 20929468 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMEM55B NM_001100814 exon1 c.A17G p.E6G GAACGCTCTCCAT . 8.0 5.0 11.0 0.0 . 90 TMEM67 91147 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 94798504 94798504 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMEM67 NM_153704 exon13 c.G1342A p.V448I GATGCAGTAAGTG . 55.0 20.0 51.0 0.0 . 92 TMEM74B 55321 broad.mit.edu;mdanderson.org 37 20 1162189 1162189 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_018354 exon2 c.T74C p.M25T GATGCCATTGGGA . 25.0 5.0 18.0 0.0 . . TMEM8C 389827 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 136384125 136384125 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMEM8C NM_001080483 exon3 c.A270T p.E90D CTTGGGTTCGTCG . 22.0 17.0 68.0 0.0 . 68 TMPRSS11A 339967 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 68789885 68789885 + Splice_Site SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMPRSS11A NM_001114387 exon7 c.482-1G>T . TCATTGCTGAAAA . 52.0 16.0 93.0 0.0 . 69 TMPRSS13 84000 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 117789167 117789167 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMPRSS13 NM_001206790 exon2 c.T408C p.P136P CCTGGCAGGAGAT . 65.0 25.0 59.0 0.0 . 91 TMPRSS15 5651 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 19732132 19732132 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TMPRSS15 NM_002772 exon8 c.A822G p.T274T ATAATATGTATTA . 188.0 86.0 188.0 0.0 . 160 TNFRSF11B 4982 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 119936998 119936998 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TNFRSF11B NM_002546 exon5 c.T821A p.I274N AGGTCAATATCTG . 58.0 31.0 80.0 0.0 . 651 TNFRSF13B 23495 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 16852254 16852254 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TNFRSF13B NM_012452 exon3 c.T243C p.H81H CAGGAGATGGTCA . 102.0 38.0 81.0 1.0 . 228 TNFRSF4 7293 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 1146948 1146948 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TNFRSF4 NM_003327 exon7 c.T821A p.L274Q TTGGCCAGGGTGG . 52.0 23.0 85.0 0.0 . 227 TNK2 10188 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 3 195594061 195594061 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TNK2 NM_005781 exon13 c.G2961T p.Q987H AGCCCTCTGCACG . 188.0 84.0 209.0 0.0 . 957 TNNI2 7136 broad.mit.edu;bcgsc.ca;mdanderson.org 37 11 1861801 1861801 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TNNI2 NM_001145841 exon3 c.A101T p.E34V AGGAGGAGAGCCG . 18.0 16.0 71.0 2.0 . 90 TNRC18 84629 broad.mit.edu;mdanderson.org 37 7 5353216 5353216 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TNRC18 NM_001080495 exon27 c.A7306T p.K2436X TGGGCTTGGGGCG . 48.0 13.0 44.0 0.0 . 46 TNRC18 84629 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 5410083 5410083 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TNRC18 NM_001080495 exon11 c.A4142C p.Q1381P AAGCTCTGCTCCA . 47.0 20.0 51.0 0.0 . 46 TNS1 7145 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 218713037 218713037 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TNS1 NM_022648 exon17 c.G1828T p.A610S CATGGGCATAGTG . 91.0 32.0 100.0 0.0 . 156 TNS3 64759 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 47408179 47408179 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TNS3 NM_022748 exon17 c.A2064T p.P688P CGAGCCTGGGGAG . 38.0 13.0 57.0 0.0 . 94 TOPBP1 11073 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 133372268 133372268 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TOPBP1 NM_007027 exon7 c.A843G p.I281M CTTGTATATGGAT . 68.0 26.0 78.0 0.0 . 540 TP53 7157 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 7578235 7578235 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd TP53,bile_duct,carcinoma,0 TP53 NM_000546 exon6 c.A614G p.Y205C TCCAAATACTCCA . 73.0 60.0 133.0 0.0 . 70225 TPM2 7169 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 35684745 35684745 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TPM2 NM_003289 exon6 c.A623G p.E208G TGGGCCTCCAGGG . 101.0 35.0 128.0 2.0 . 515 TPR 7175 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 1 186324666 186324666 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TPR NM_003292 exon17 c.A2047C p.K683Q CTTTTTTGTAGTT . 202.0 10.0 93.0 0.0 . 228 TPR 7175 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 186291450 186291450 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TPR NM_003292 exon45 c.A6461T p.H2154L ACTTACTGAATTG . 459.0 98.0 252.0 0.0 . 228 TPR 7175 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 186327705 186327705 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TPR NM_003292 exon13 c.G1467C p.M489I TATTTCCATTCTT . 120.0 79.0 78.0 0.0 . 228 TPTE 7179 broad.mit.edu;bcgsc.ca 37 21 10951410 10951410 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TPTE NM_199261 exon10 c.T302A p.L101Q AAGACCAGGAAAA . 661.0 147.0 714.0 2.0 . 344 TPTE 7179 broad.mit.edu;bcgsc.ca;mdanderson.org 37 21 10908836 10908836 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TPTE NM_199261 exon23 c.T1509A p.I503I ATTTTCAATAAAA . 78.0 10.0 123.0 0.0 . 344 TRAK1 22906 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 42226292 42226292 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRAK1 NM_001265608 exon4 c.A479G p.E160G GGGAGGAGGTAAG . 147.0 72.0 182.0 1.0 . 91 TRANK1 9881 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 36897302 36897302 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRANK1 NM_014831 exon12 c.A3779T p.E1260V TTATCCTCCTCAC . 176.0 84.0 181.0 0.0 . 24 TRAP1 10131 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 3739091 3739091 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRAP1 NM_016292 exon3 c.G295T p.D99Y CAATGTCCAAAAG . 59.0 25.0 91.0 1.0 . 226 TRAPPC3 27095 broad.mit.edu;bcgsc.ca 37 1 36605744 36605744 + Silent SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRAPPC3 NM_001270894 exon2 c.C66G p.T22T ACCATAGGTCAGG . 166.0 12.0 206.0 0.0 . 90 TRAPPC9 83696 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 140898164 140898164 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRAPPC9 NM_031466 exon21 c.A3308C p.Q1103P ACGAGCTGGTTCA . 208.0 101.0 257.0 1.0 . 228 TRAT1 50852 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 108572586 108572586 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRAT1 NM_016388 exon6 c.T423G p.H141Q ACTACATGCAATA . 328.0 165.0 384.0 0.0 . 227 TRHDE 29953 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 73012775 73012775 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRHDE NM_013381 exon13 c.T2291C p.L764P ATCCTCTAGATAA . 254.0 120.0 295.0 0.0 . 93 TRIM38 10475 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 25983702 25983702 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRIM38 NM_006355 exon8 c.A1185T p.A395A TGTAGCACTTACT . 85.0 32.0 96.0 0.0 . 226 TRIM41 90933 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 180661725 180661725 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRIM41 NM_033549 exon6 c.C1843A p.P615T GTCTTTCCTTTCT . 50.0 15.0 75.0 0.0 . 226 TRIM43 129868 broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 96260836 96260836 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRIM43 NM_138800 exon3 c.G450T p.K150N GAAAAAGATTCAA . 290.0 112.0 287.0 2.0 . 63 TRIM59 286827 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 3 160156798 160156798 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRIM59 NM_173084 exon3 c.T174C p.N58N TCTGCAATTAGGG . 120.0 46.0 132.0 0.0 . 658 TRIP13 9319 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 5 901481 901481 + Nonsense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRIP13 NM_004237 exon5 c.T470G p.L157X CAACTTTACTGTT . 77.0 33.0 129.0 0.0 . 90 TRO 7216 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 54955840 54955840 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRO NM_001039705 exon12 c.A2683T p.T895S CTCAGCACCAGTG . 43.0 43.0 55.0 0.0 . 131 TROVE2 6738 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 193045014 193045014 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TROVE2 NM_004600 exon3 c.A645G p.E215E TAAAGAAAAAGCA . 330.0 104.0 161.0 0.0 . 115 TRPA1 8989 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 8 72983964 72983964 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRPA1 NM_007332 exon2 c.A250T p.R84X AATCTCTGGTGAT . 69.0 27.0 73.0 0.0 . 230 TRPM4 54795 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 49703938 49703938 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRPM4 NM_017636 exon19 c.G2849T p.G950V CGGAGGGGCTCCT . 41.0 17.0 45.0 0.0 . 91 TRPM6 140803 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 77418778 77418778 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRPM6 NM_017662 exon15 c.A1663G p.R555G CATTTCTATTTCC . 95.0 31.0 71.0 0.0 . 335 TRPV2 51393 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 16332223 16332223 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRPV2 NM_016113 exon10 c.T1514A p.L505Q TGGTGCTGGGCTG . 28.0 24.0 47.0 0.0 . 91 TRPV5 56302 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 142612494 142612494 + Silent SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TRPV5 NM_019841 exon10 c.G1269T p.G423G GAATGGCCCCCCA . 188.0 83.0 264.0 0.0 . 177 TSC1 7248 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 135779040 135779040 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TSC1 NM_000368 exon17 c.A2206G p.M736V TCACCATGGCAGC . 46.0 38.0 78.0 0.0 . 1906 TSNARE1 203062 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 143425368 143425368 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TSNARE1 NM_145003 exon4 c.A704C p.Q235P AGGGCCTGGCAAG . 71.0 26.0 79.0 0.0 . 90 TTC23L 153657 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 34880306 34880306 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTC23L NM_144725 exon9 c.A970G p.I324V TATTTCATAAGAA . 198.0 94.0 186.0 0.0 . 22 TTC27 55622 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 32891805 32891805 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTC27 NM_017735 exon7 c.A909T p.P303P CACTCCAGCACCC . 54.0 28.0 107.0 0.0 . 90 TTC29 83894 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 4 147860987 147860987 + Nonsense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTC29 NM_031956 exon3 c.A61T p.K21X GCAGCTTCTGTCT . 84.0 44.0 105.0 0.0 . 90 TTC30B 150737 broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 178415920 178415920 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_152517 exon1 c.T1572G p.I524M CTTTTCAATCTTC . 218.0 72.0 247.0 1.0 . . TTC3 7267 broad.mit.edu;bcgsc.ca 37 21 38555158 38555158 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTC3 NM_001001894 exon36 c.A4700T p.Q1567L AAATCCAAGAAAG . 343.0 15.0 423.0 2.0 . 590 TTC40 54777 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 134712524 134712524 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001200049 exon24 c.A3158T p.K1053M TTGGCCTTCTTCC . 74.0 36.0 137.0 0.0 . . TTC40 54777 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 134659626 134659626 + Missense_Mutation SNP A A T rs10870341 byfrequency;alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001200049 exon44 c.T6373A p.C2125S CTTGGCACCGGAG . 25.0 10.0 33.0 0.0 A|0.840;G|0.160 . TTC9B 148014 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 19 40724111 40724111 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTC9B NM_152479 exon1 c.A178T p.S60C GGCTGCTGTCGAG . 30.0 17.0 22.0 0.0 . 90 TTF2 8458 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 117618107 117618107 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTF2 NM_003594 exon5 c.A901T p.I301L CCTAGCATACAGG . 162.0 80.0 157.0 0.0 . 91 TTLL12 23170 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 43570530 43570530 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTLL12 NM_015140 exon7 c.A1009T p.N337Y AGAAGTTGAAGAG . 24.0 12.0 34.0 0.0 . 90 TTLL1 25809 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 22 43459928 43459928 + Splice_Site SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTLL1 NM_012263 exon8 c.639-1G>T . TTGTACCTAGGAG . 80.0 35.0 100.0 0.0 . 92 TTLL4 9654 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 219609870 219609870 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTLL4 NM_014640 exon6 c.A1700T p.H567L CCAATCATGAGAA . 116.0 43.0 152.0 0.0 . 93 TTN 7273 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 179596251 179596251 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTN NM_001267550 exon59 c.G17242T p.A5748S GGAAGGCAGCTGT . 66.0 28.0 77.0 1.0 . 636 TTN 7273 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 2 179590678 179590678 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTN NM_001267550 exon70 c.G20371A p.E6791K CCACCTCAAACGG . 125.0 56.0 167.0 0.0 . 636 TTN 7273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 179398439 179398439 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTN NM_001267550 exon358 c.T102903A p.G34301G ATTGTCACCTGGT . 64.0 33.0 76.0 0.0 . 636 TTN 7273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 179401059 179401059 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTN NM_001267550 exon357 c.T100415A p.L33472Q CCACCTAGATTTT . 71.0 45.0 97.0 0.0 . 636 TTN 7273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 179477140 179477140 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTN NM_001267550 exon266 c.T50112A p.T16704T CTTGACAGTGGTA . 69.0 37.0 84.0 0.0 . 636 TTN 7273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 179482943 179482943 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTN NM_001267550 exon252 c.A47242T p.N15748Y CAGGATTGTCAGT . 81.0 37.0 87.0 0.0 . 636 TTN 7273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 179584711 179584711 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTN NM_001267550 exon81 c.A23658T p.L7886L CTAACCTAGTACA . 65.0 25.0 87.0 0.0 . 636 TTN 7273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 179594257 179594257 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTN NM_001267550 exon64 c.A18626T p.E6209V ACTACCTCCACAG . 69.0 30.0 57.0 0.0 . 636 TTN 7273 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 179644181 179644181 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTN NM_001267550 exon23 c.T3738A p.H1246Q AGAAATATGGAAT . 96.0 39.0 133.0 0.0 . 636 TTYH1 57348 bcgsc.ca;mdanderson.org 37 19 54930431 54930431 + Missense_Mutation SNP G G T rs3745433 alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_1 WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TTYH1 NM_020659 exon2 c.G256T p.G86W TCGCCCGGGGGAG . 14.0 4.0 23.0 0.0 T|0.000;C|0.999 90 TUB 7275 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 11 8111646 8111646 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TUB NM_003320 exon4 c.A286T p.K96X AAGAAGAAGCGCC . 82.0 28.0 175.0 0.0 . 91 TUBA1C 84790 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 12 49666554 49666554 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TUBA1C NM_032704 exon4 c.A894T p.P298P TGAGCCAGCCAAC . 190.0 105.0 233.0 0.0 . 90 TUBB6 84617 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 12325366 12325366 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TUBB6 NM_032525 exon4 c.T578A p.V193E AGCTGGTGGAGAA . 45.0 36.0 111.0 0.0 . 90 TUSC3 7991 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 15480679 15480679 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TUSC3 NM_178234 exon2 c.A229T p.I77L AAATTTATAAAGG . 54.0 44.0 102.0 1.0 . 516 TYW3 127253 bcgsc.ca;mdanderson.org 37 1 75229761 75229761 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_1 WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . TYW3 NM_138467 exon6 c.A744G p.L248L TGATCTAGGAATC . 126.0 52.0 121.0 2.0 . 70 UACA 55075 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 70959793 70959793 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UACA NM_018003 exon16 c.A3230G p.Q1077R TATTTCTGTGACA . 51.0 26.0 78.0 1.0 . 94 UBA1 7317 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 47074244 47074244 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UBA1 NM_153280 exon26 c.G3093A p.V1031V CCACGTGCGGGCG . 25.0 24.0 34.0 0.0 . 227 UBA6 55236 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 68506897 68506897 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UBA6 NM_018227 exon18 c.A1526G p.Q509R AGGAACTGTCTAT . 85.0 46.0 96.0 0.0 . 90 UBAP2 55833 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 9 33953474 33953474 + Splice_Site SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UBAP2 NM_018449 exon13 c.867-2A>G . CAATGCTAAGCAG . 91.0 46.0 104.0 0.0 . 94 UBAP2L 9898 broad.mit.edu;bcgsc.ca;mdanderson.org 37 1 154223688 154223688 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UBAP2L NM_001127320 exon13 c.C1385T p.S462L CCACATCGGCTCC . 270.0 16.0 143.0 1.0 . 91 UBE2N 7334 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 93804888 93804888 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UBE2N NM_003348 exon2 c.C218T p.T73I ATTTTGGTCATGA . 186.0 84.0 195.0 0.0 . 659 UBE2Q2 92912 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 76152229 76152229 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UBE2Q2 NM_173469 exon3 c.A293T p.Q98L GTCAGCAATTGAA . 75.0 38.0 100.0 0.0 . 70 UBE2Q2 92912 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 76183352 76183352 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UBE2Q2 NM_173469 exon11 c.T1026C p.N342N AGCAAATAAGGTA . 82.0 32.0 105.0 0.0 . 70 UBE4B 10277 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 10221232 10221232 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UBE4B NM_001105562 exon23 c.T3086C p.M1029T TAAACATGTTGAT . 123.0 50.0 120.0 0.0 . 229 UBR2 23304 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 42562032 42562032 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UBR2 NM_001184801 exon4 c.A521G p.E174G AAATTGAGGAAGA . 96.0 31.0 92.0 0.0 . 94 UBR3 130507 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 170806488 170806488 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UBR3 NM_172070 exon23 c.T3458C p.I1153T GCATCATTGAAGA . 134.0 58.0 163.0 0.0 . 68 UCHL5 51377 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 192993077 192993077 + Splice_Site SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UCHL5 NM_015984 exon9 c.630-1G>T . CTGTACCTAGAAG . 132.0 45.0 52.0 0.0 . 619 UGT1A10 54575 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 234545950 234545950 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UGT1A10 NM_019075 exon1 c.A782G p.Y261C TGGACTATCCCAA . 82.0 34.0 89.0 0.0 . 27 UNC45B 146862 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 33495163 33495163 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UNC45B NM_001267052 exon10 c.T1235A p.L412Q TTGACCTGGGCAA . 101.0 44.0 114.0 0.0 . 157 UNC5D 137970 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 35631946 35631946 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UNC5D NM_080872 exon16 c.G2608T p.A870S CCCAATGCCAAAG . 58.0 47.0 103.0 0.0 . 96 UNC80 285175 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 210843330 210843330 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UNC80 NM_032504 exon58 c.C8818A p.R2940S ATGTCCCGCTCTA . 111.0 52.0 155.0 0.0 . 90 URB2 9816 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 229773082 229773082 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . URB2 NM_014777 exon4 c.A2722T p.S908C CTGGACAGCCTCT . 33.0 31.0 59.0 0.0 . 174 UROC1 131669 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 126219694 126219694 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . UROC1 NM_001165974 exon12 c.A1169G p.D390G GTCGTGTCCAATT . 57.0 22.0 72.0 0.0 . 91 USH2A 7399 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 216373134 216373134 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . USH2A NM_007123 exon17 c.T3646A p.Y1216N AATCGTACTTGGC . 83.0 67.0 147.0 1.0 . 115 USP17L1P 401447 hgsc.bcm.edu;mdanderson.org 37 8 7190945 7190945 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001256873 exon1 c.G1037C p.W346S TCCAGTGGTATAA . 86.0 71.0 88.0 0.0 . . USP22 23326 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 17 20919135 20919135 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . USP22 NM_015276 exon6 c.A768T p.A256A GTAGCCTGCTAGG . 41.0 16.0 46.0 0.0 . 636 USP25 29761 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 21 17196476 17196476 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . USP25 NM_013396 exon11 c.A1199G p.Y400C TTTTATATTTGGA . 28.0 15.0 28.0 0.0 . 663 USP31 57478 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 16 23080584 23080584 + Missense_Mutation SNP C C A rs34435034 byfrequency;alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . USP31 NM_020718 exon16 c.G2842T p.V948L TGAACACGCCTTC . 52.0 23.0 79.0 0.0 C|0.999;T|0.001 663 USP32 84669 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 58260585 58260585 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . USP32 NM_032582 exon31 c.A4064T p.D1355V AGCACGTCCTCTT . 130.0 70.0 137.0 0.0 . 704 USP38 84640 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 4 144133531 144133531 + Nonsense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . USP38 NM_032557 exon8 c.A1558T p.R520X ACTCCCAGATCAC . 73.0 34.0 65.0 0.0 . 660 USP42 84132 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 6183734 6183734 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . USP42 NM_032172 exon9 c.A897T p.P299P GGTTCCAGCTTCA . 64.0 25.0 73.0 0.0 . 659 USP5 8078 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 6974028 6974028 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . USP5 NM_001098536 exon18 c.A2387T p.D796V TCCGGGATGGTCC . 30.0 9.0 32.0 0.0 . 659 VARS2 57176 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 30892148 30892148 + Silent SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd VARS2,NS,carcinoma,+2 VARS2 NM_001167734 exon26 c.G2574C p.V858V GCCCGTGCTGTGG . 81.0 36.0 87.0 0.0 . 26 VCAM1 7412 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 101186271 101186271 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . VCAM1 NM_001078 exon2 c.A304T p.R102W GAATCTAGGAAAT . 111.0 52.0 112.0 0.0 . 90 VEGFC 7424 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 177608644 177608644 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . VEGFC NM_005429 exon6 c.G842A p.G281E TTTGGTCCACAGA . 45.0 17.0 39.0 0.0 . 710 VIPR2 7434 broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 158823467 158823467 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . VIPR2 NM_003382 exon13 c.T1157A p.L386Q CGCTTCAGCTCGC . 31.0 10.0 57.0 1.0 . 91 VIT 5212 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 36982076 36982076 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . VIT NM_001177969 exon5 c.T288A p.D96E GCTTGATAATTCA . 99.0 39.0 97.0 0.0 . 92 VIT 5212 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 37035640 37035640 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . VIT NM_053276 exon15 c.A1415G p.Y472C GCTTCTACTCGCT . 105.0 43.0 157.0 0.0 . 92 VPS13C 54832 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 62223325 62223325 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . VPS13C NM_020821 exon50 c.A6002C p.D2001A AGATCATCAAGGG . 91.0 41.0 96.0 0.0 . 92 VPS13D 55187 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 12567012 12567012 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . VPS13D NM_015378 exon69 c.A12900G p.L4300L TTTCCTAGAAGTC . 105.0 37.0 130.0 0.0 . 95 VWA3B 200403 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 98866838 98866838 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . VWA3B NM_144992 exon20 c.C2731G p.Q911E AACCCCCAAGGAG . 82.0 40.0 127.0 0.0 . 139 VWF 7450 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 6140731 6140731 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . VWF NM_000552 exon21 c.G2699A p.S900N GGGTTACTGCCGC . 78.0 43.0 84.0 0.0 . 163 VWF 7450 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 6143964 6143964 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . VWF NM_000552 exon20 c.A2575G p.T859A GGTCTGTGCAGTT . 79.0 40.0 116.0 0.0 . 163 WBSCR17 64409 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 70885934 70885934 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . WBSCR17 NM_022479 exon5 c.C805T p.R269C CGGAAGCGTGTGA . 98.0 54.0 97.0 0.0 . 96 WBSCR17 64409 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 71036347 71036347 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . WBSCR17 NM_022479 exon6 c.T1040G p.M347R CTGGCATGGATGT . 81.0 41.0 99.0 0.0 . 96 WBSCR27 155368 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 73254767 73254767 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . WBSCR27 NM_152559 exon4 c.A365T p.Q122L GGCTCCTGGCCCA . 83.0 37.0 111.0 0.0 . 90 WDFY4 57705 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 50154931 50154931 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . WDFY4 NM_020945 exon51 c.T7894A p.Y2632N CACTACTACACCC . 94.0 42.0 113.0 1.0 . 22 WDFY4 57705 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 50174650 50174650 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . WDFY4 NM_020945 exon55 c.T8516A p.L2839Q TGAGCCTGCCTGG . 62.0 18.0 95.0 0.0 . 22 WDR17 116966 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 177098697 177098697 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . WDR17 NM_170710 exon30 c.A3741G p.L1247L GAGACTAAAAGAA . 96.0 50.0 120.0 0.0 . 95 WDR36 134430 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 110430616 110430616 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . WDR36 NM_139281 exon2 c.331-2A>T . TTAAACAGGTTCA . 50.0 28.0 77.0 0.0 . 92 WDR47 22911 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 109553760 109553760 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . WDR47 NM_001142550 exon5 c.A929G p.Q310R GCTGATTGAGGTC . 77.0 29.0 101.0 0.0 . 91 WDR52 55779 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 113092276 113092276 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . WDR52 NM_001164496 exon18 c.T2426C p.I809T GTTTGGATGGGAT . 90.0 37.0 79.0 0.0 . 90 WDR76 79968 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 44158449 44158449 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . WDR76 NM_024908 exon13 c.A1740C p.T580T TGAGACAGGAAAG . 141.0 57.0 126.0 0.0 . 90 WDR87 83889 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 38383818 38383818 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_031951 exon4 c.T2408A p.L803Q CACTGTAGGTATA . 61.0 23.0 66.0 0.0 . . WDR87 83889 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 38384319 38384319 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_031951 exon4 c.T1907C p.L636S AATTTTAAACAGG . 53.0 18.0 50.0 0.0 . . WDR93 56964 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 15 90246187 90246187 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . WDR93 NM_020212 exon3 c.A310C p.K104Q CTCAACAAAATGC . 85.0 41.0 101.0 0.0 . 24 WIPF3 644150 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 29915478 29915478 + Silent SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . WIPF3 NM_001080529 exon3 c.A123C p.A41A AAGGGCAGATCCG . 168.0 69.0 251.0 0.0 . 69 WNK2 65268 broad.mit.edu;bcgsc.ca;mdanderson.org 37 9 96021605 96021605 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . WNK2 NM_006648 exon11 c.T2775A p.P925P CGTCCCTCCTTCC . 117.0 51.0 135.0 1.0 . 765 WNK2 65268 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 96051121 96051121 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . WNK2 NM_006648 exon19 c.T4085A p.L1362Q GCTTTCTAGCCAG . 161.0 58.0 199.0 0.0 . 765 XKR7 343702 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 30585087 30585087 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . XKR7 NM_001011718 exon3 c.A1567T p.I523F CCTGTCATCCGGA . 29.0 16.0 29.0 0.0 . 137 XRCC4 7518 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 82491711 82491711 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . XRCC4 NM_003401 exon4 c.A438T p.K146N GCAGAAAGAAAAT . 45.0 29.0 50.0 0.0 . 229 XRN1 54464 hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 142122605 142122605 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . XRN1 NM_001042604 exon18 c.A2014G p.K672E TTTTCTTCAAAAA . 309.0 120.0 309.0 0.0 . 93 XRN2 22803 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 21369946 21369946 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . XRN2 NM_012255 exon30 c.A2823T p.P941P TTTGCCACCACCC . 84.0 40.0 90.0 1.0 . 515 XYLT1 64131 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 17353092 17353092 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . XYLT1 NM_022166 exon3 c.A666G p.R222R TGCGGCTCTGTCC . 86.0 40.0 87.0 0.0 . 94 YEATS4 8089 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 12 69759665 69759665 + Splice_Site SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . YEATS4 NM_006530 exon4 c.333+1G>T . AGACCTGTGAGTA . 263.0 99.0 257.0 0.0 . 226 ZAN 7455 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 100349862 100349862 + RNA SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZAN . . . . CCCACCATCTCCC . 98.0 48.0 106.0 1.0 . 142 ZAN 7455 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 100365533 100365533 + RNA SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZAN . . . . TCGTCCTCCTCTA . 109.0 48.0 129.0 0.0 . 142 ZBTB2 57621 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 151687080 151687080 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZBTB2 NM_020861 exon3 c.A1121C p.Q374P CTTTTCTGGATAA . 125.0 61.0 142.0 0.0 . 91 ZBTB49 166793 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 4304686 4304686 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZBTB49 NM_145291 exon3 c.A1123G p.R375G ACGGAGAGGCCTG . 138.0 45.0 186.0 0.0 . 92 ZC3H14 79882 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 14 89044335 89044335 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZC3H14 NM_001160104 exon9 c.A1130C p.Q377P TTCCACAGAAACA . 255.0 96.0 331.0 0.0 . 93 ZC3HAV1 56829 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 138749665 138749665 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZC3HAV1 NM_024625 exon8 c.A1953G p.P651P CTGAAATGGCACA . 72.0 36.0 58.0 0.0 . 91 ZCCHC16 340595 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 X 111698806 111698806 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZCCHC16 NM_001004308 exon3 c.A850G p.S284G TACTGCAGCCAAT . 151.0 131.0 178.0 2.0 . 91 ZDHHC18 84243 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 27177682 27177682 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZDHHC18 NM_032283 exon6 c.A896T p.H299L GGTTTCACACGTA . 95.0 38.0 111.0 0.0 . 90 ZFAND4 93550 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 46135397 46135397 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001128324 exon6 c.A584G p.Y195C GAATTATACATAG . 51.0 17.0 54.0 0.0 . . ZFP112 7771 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 44832441 44832441 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZFP112 NM_001083335 exon5 c.A1887T p.R629S GTGGACTCTCTGA . 113.0 49.0 146.0 0.0 . 95 ZFP112 7771 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 44833042 44833042 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZFP112 NM_001083335 exon5 c.A1286C p.N429T TCAAGATTTGAAC . 82.0 26.0 76.0 0.0 . 95 ZFP2 80108 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 5 178359135 178359135 + Missense_Mutation SNP A A G rs147320919 byfrequency;alternate_allele TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZFP2 NM_030613 exon5 c.A821G p.Q274R GTAGTCAATGTGG . 55.0 33.0 90.0 0.0 A|1.000;C|0.000 93 ZFP62 643836 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 180278100 180278100 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001172638 exon2 c.A395T p.Q132L GTTTTCTGCTGTA . 40.0 11.0 71.0 0.0 . . ZFP64 55734 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 50701565 50701565 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZFP64 NM_199427 exon9 c.A1469C p.Q490P TCGGCCTGGTGCA . 29.0 12.0 40.0 0.0 . 155 ZFPM2 23414 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 106814726 106814726 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZFPM2 NM_012082 exon8 c.A2416G p.N806D ACGATCAACAAGT . 139.0 72.0 154.0 1.0 . 139 ZFR2 23217 broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 3831767 3831767 + Silent SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZFR2 NM_015174 exon4 c.C489G p.S163S TCCCGAGGACAAG . 18.0 6.0 42.0 0.0 . 70 ZFR2 23217 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 3811305 3811305 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZFR2 NM_015174 exon15 c.T2302A p.S768T CCAGGGACTCGAG . 33.0 13.0 44.0 0.0 . 70 ZNF202 7753 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 11 123599835 123599835 + Missense_Mutation SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF202 NM_003455 exon6 c.A701G p.Q234R CACACCTGTGACA . 33.0 9.0 29.0 0.0 . 91 ZNF208 7757 broad.mit.edu;ucsc.edu;mdanderson.org 37 19 22155602 22155602 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF208 NM_007153 exon4 c.G2234A p.G745E TTCTCTCCAGTAT . 15.0 8.0 19.0 0.0 . 7 ZNF221 7638 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 44470227 44470227 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF221 NM_013359 exon6 c.A573T p.S191S ACAATCACACTCA . 55.0 23.0 86.0 0.0 . 91 ZNF224 7767 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 44610721 44610721 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF224 NM_013398 exon6 c.A408T p.A136A TGAGGCAGGACTA . 77.0 38.0 71.0 0.0 . 92 ZNF230 7773 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 44515114 44515114 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF230 NM_006300 exon5 c.A923G p.Y308C AACTGTACAAATC . 55.0 24.0 86.0 0.0 . 90 ZNF287 57336 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 17 16455335 16455335 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF287 NM_020653 exon6 c.T2121A p.N707K ACATTCATTACAT . 217.0 76.0 101.0 0.0 . 90 ZNF333 84449 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 14828536 14828536 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF333 NM_032433 exon11 c.T891C p.D297D CATTGATGTGAAA . 60.0 30.0 73.0 0.0 . 92 ZNF33B 7582 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 43089253 43089253 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF33B NM_006955 exon5 c.A1145T p.E382V GGTTTCTCCCCTG . 62.0 36.0 86.0 0.0 . 90 ZNF347 84671 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 53644359 53644359 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF347 NM_001172675 exon5 c.T1725C p.C575C CTTGCCACACTCA . 37.0 17.0 66.0 0.0 . 90 ZNF358 140467 ucsc.edu;mdanderson.org 37 19 7585107 7585107 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF358 NM_018083 exon2 c.G979A p.A327T GGCAAAGCCTTCG . 20.0 7.0 11.0 0.0 . 90 ZNF365 22891 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 10 64415185 64415185 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF365 NM_199452 exon4 c.C185T p.T62I ATCTCACCTTCCA . 133.0 63.0 140.0 0.0 . 92 ZNF365 22891 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 64425949 64425949 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF365 NM_199451 exon7 c.A1281C p.Q427H ACTCCAAAATTGT . 45.0 13.0 65.0 0.0 . 92 ZNF385B 151126 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 2 180311266 180311266 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF385B NM_152520 exon7 c.A902T p.E301V TGTGCCTCTAGCT . 67.0 23.0 81.0 0.0 . 23 ZNF394 84124 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 7 99097607 99097607 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF394 NM_032164 exon1 c.T110C p.L37S ACGGGCAAAAGTC . 33.0 15.0 25.0 0.0 . 90 ZNF395 55893 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 8 28206270 28206270 + Missense_Mutation SNP C C T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF395 NM_018660 exon10 c.G1508A p.R503Q TTCCACCGGCAGG . 24.0 24.0 91.0 0.0 . 90 ZNF423 23090 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 49764842 49764842 + Silent SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF423 NM_015069 exon3 c.C117T p.S39S CGCACGGCTGGTT . 45.0 38.0 101.0 0.0 . 228 ZNF429 353088 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 21719234 21719234 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF429 NM_001001415 exon4 c.A379G p.K127E CTATACAAAGGAG . 113.0 45.0 138.0 0.0 . 516 ZNF430 80264 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 21239855 21239855 + Silent SNP C C T rs148853343 TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd ZNF430,abdomen,malignant_melanoma,0 ZNF430 NM_025189 exon5 c.C741T p.T247T CTCAACCCTTACT . 182.0 81.0 221.0 0.0 . 516 ZNF431 170959 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 21365902 21365902 + Missense_Mutation SNP G G T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF431 NM_133473 exon5 c.G796T p.G266C GAATGTGGCAAAG . 78.0 39.0 67.0 0.0 . 514 ZNF451 26036 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 6 56993604 56993604 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF451 NM_001031623 exon5 c.A390T p.A130A AGCAGCAAGACTG . 107.0 32.0 82.0 0.0 . 93 ZNF460 10794 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 57803168 57803168 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF460 NM_006635 exon3 c.A1259G p.Y420C AGCCCTATGAGTG . 54.0 51.0 91.0 0.0 . 90 ZNF471 57573 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 57036782 57036782 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF471 NM_020813 exon5 c.A1346C p.H449P CTCAGCATCAAAG . 38.0 31.0 91.0 0.0 . 154 ZNF484 83744 broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 9 95618117 95618117 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF484 NM_001261458 exon3 c.G217C p.E73Q GGATCTCACCATC . 84.0 38.0 98.0 1.0 . 90 ZNF488 118738 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 10 48370707 48370707 + Missense_Mutation SNP G G C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF488 NM_153034 exon2 c.G175C p.E59Q GGCCCTGAGGCTG . 24.0 7.0 35.0 0.0 . 91 ZNF507 22847 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 32843894 32843894 + Missense_Mutation SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF507 NM_001136156 exon3 c.A158G p.K53R TAAGCAAGATAGT . 78.0 36.0 74.0 0.0 . 230 ZNF521 25925 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 22669533 22669533 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF521 NM_015461 exon7 c.G3802T p.A1268S TGTTTGCTTGAAC . 102.0 40.0 110.0 0.0 . 275 ZNF521 25925 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 22806527 22806527 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF521 NM_015461 exon4 c.T1355A p.L452Q TCATTTAGGTTAT . 69.0 41.0 91.0 0.0 . 275 ZNF521 25925 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 18 22807425 22807425 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF521 NM_015461 exon4 c.A457T p.R153W ACAGCCTACTGCA . 119.0 62.0 143.0 0.0 . 275 ZNF536 9745 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 30935770 30935770 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF536 NM_014717 exon2 c.T1301G p.L434R CCTGCCTGCAGAG . 62.0 21.0 69.0 0.0 . 144 ZNF549 256051 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 58048776 58048776 + Missense_Mutation SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF549 NM_001199295 exon4 c.T404G p.V135G CGTCTGTGGCCAG . 93.0 68.0 159.0 0.0 . 91 ZNF585A 199704 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 37644045 37644045 + Silent SNP T T G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF585A NM_199126 exon6 c.A591C p.T197T CTTTTGTGTGAAT . 72.0 37.0 71.0 0.0 . 92 ZNF598 90850 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 2048704 2048704 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF598 NM_178167 exon13 c.A2360T p.Q787L CTGACCTGTCTGA . 64.0 27.0 73.0 0.0 . 432 ZNF608 57507 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 5 123983650 123983650 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF608 NM_020747 exon4 c.A2427G p.K809K TTTGTCTTTGAGT . 127.0 36.0 169.0 0.0 . 229 ZNF644 84146 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 91403139 91403139 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF644 NM_201269 exon4 c.A3591T p.T1197T TCTTGCTGTCTGA . 71.0 27.0 109.0 0.0 . 155 ZNF644 84146 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 91405810 91405810 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF644 NM_201269 exon3 c.A1101T p.P367P CTTATCTGGGTTA . 90.0 32.0 86.0 0.0 . 155 ZNF644 84146 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 91406111 91406111 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF644 NM_201269 exon3 c.A800T p.Q267L AGAAATTGAATGA . 79.0 42.0 91.0 0.0 . 155 ZNF662 389114 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 3 42956611 42956611 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF662 NM_001134656 exon4 c.A1124T p.Q375L TTTCTCAGCACCA . 109.0 47.0 106.0 0.0 . 90 ZNF669 79862 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 1 247264199 247264199 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF669 NM_024804 exon4 c.G872T p.G291V CAAGAACCGGAAA . 27.0 20.0 72.0 0.0 . 90 ZNF677 342926 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 53741010 53741010 + Missense_Mutation SNP A A C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF677 NM_182609 exon5 c.T970G p.C324G TGCCACATATATT . 72.0 40.0 99.0 0.0 . 91 ZNF681 148213 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 23926975 23926975 + Silent SNP A A G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_138286 exon4 c.T1377C p.F459F CTGGTTAAAGGCT . 21.0 8.0 38.0 0.0 . . ZNF71 58491 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 57132817 57132817 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF71 NM_021216 exon3 c.A162T p.A54A AGGTGCAGAGTGG . 42.0 37.0 125.0 0.0 . 91 ZNF721 170960 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 4 436177 436177 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF721 NM_133474 exon3 c.G2079G p.K693K TTTTTCTCCAGTA . 93.0 31.0 119.0 0.0 . 47 ZNF727 442319 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca 37 7 63529267 63529267 + Splice_Site SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001159522 exon2 c.4-2A>T . TTTTTCAGCGAGT . 49.0 23.0 59.0 0.0 . . ZNF727 442319 hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 63538686 63538686 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001159522 exon4 c.A1259T p.E420V ATATGGAAGTGAG . 130.0 66.0 132.0 0.0 . . ZNF735 730291 ucsc.edu;mdanderson.org 37 7 63680540 63680540 + Missense_Mutation SNP C C A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic . WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . NM_001159524 exon4 c.C1111A p.H371N AAGGCACATAAGA . 35.0 18.0 25.0 1.0 . . ZNF804B 219578 broad.mit.edu;bcgsc.ca;mdanderson.org 37 7 88965401 88965401 + Silent SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . . Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF804B NM_181646 exon4 c.A3105T p.T1035T AGTAACAGAGTCT . 116.0 60.0 139.0 1.0 . 101 ZNF93 81931 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 20026109 20026109 + Silent SNP T T C novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNF93 NM_031218 exon2 c.T24C p.D8D TAGAGATGTGGCC . 40.0 22.0 35.0 0.0 . 91 ZNFX1 57169 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 20 47879931 47879931 + Missense_Mutation SNP C C A rs139038003 byfrequency TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNFX1 NM_021035 exon6 c.G2241T p.Q747H CAGGTACTGTTCC . 64.0 25.0 89.0 0.0 C|1.000;A|0.000 24 ZNRF4 148066 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org 37 19 5456001 5456001 + Missense_Mutation SNP A A T novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 A A . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZNRF4 NM_181710 exon1 c.A499T p.T167S GACTGCACCTTCG . 13.0 9.0 14.0 0.0 . 135 ZP2 7783 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 16 21215496 21215496 + Missense_Mutation SNP G G A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 G G . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZP2 NM_003460 exon9 c.C827T p.T276I GGTATGGTGAGAG . 42.0 18.0 78.0 0.0 . 91 ZSCAN18 65982 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 58598367 58598367 + Missense_Mutation SNP C C G novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 C C . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZSCAN18 NM_001145542 exon5 c.G819C p.K273N AAAGGACTTCAGC . 17.0 16.0 27.0 0.0 . 90 ZSCAN18 65982 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 19 58601546 58601546 + Missense_Mutation SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZSCAN18 NM_001145542 exon2 c.A257T p.Q86L TCCTGCTGGACTC . 81.0 62.0 215.0 1.0 . 90 ZUFSP 221302 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org 37 6 116973312 116973312 + Silent SNP T T A novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 T T . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . ZUFSP NM_145062 exon6 c.A1005T p.T335T CACATCTGTGGCA . 75.0 23.0 97.0 0.0 . 69 SIX4 51804 broad.mit.edu;bcgsc.ca 37 14 61190041 61190042 + Missense_Mutation DNP GC GC TA novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 GC GC . . . . . Untested Somatic Phase_I WXS none . . Illumina GAIIx c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . p.A251Y TTCTCGGCGGGCG . 30.0 9.0 35.0 0.0 . . KIAA1683 80726 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 19 18377981 18377982 + Missense_Mutation DNP CA CA AG novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 CA CA . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . p.L123P GGAAATCAGCTTC . 74.0 33.0 77.0 0.0 . . DENND2A 27147 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 7 140301960 140301961 + Missense_Mutation DNP CC CC AA novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 CC CC . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . p.V80L TCTCCACCGTAGA . 159.0 66.0 207.0 0.0 . . ZFPM2 23414 hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca 37 8 106813460 106813461 + Missense_Mutation DNP CT CT AC novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 CT CT . . . . Unknown Untested Somatic Phase_I WXS none . . Illumina HiSeq c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . p.L384T CAGGAGCTCCATG . 106.0 48.0 137.0 0.0 . . RXRA 6256 broad.mit.edu;bcgsc.ca 37 9 137293489 137293490 + Missense_Mutation DNP CA CA AT novel TCGA-UB-A7MB-01A-11D-A33Q-10 TCGA-UB-A7MB-10A-01D-A33Q-10 CA CA . . . . . Untested Somatic Phase_I WXS none . . Illumina GAIIx c7af114d-6f4d-4bf8-978c-4eebf696b12e 2cff442a-ea76-4fbd-9c30-57cc414c49bd . . . . . p.Q14M TCCACCCAGGTGA . 47.0 37.0 93.0 1.0 . .