Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_position End_position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer Tumor_Sample_UUID Matched_Norm_Sample_UUID COSMIC_Codon COSMIC_Gene Transcript_Id Exon ChromChange AAChange Genome_Plus_Minus_10_Bp Drug_Target TTotCov TVarCov NTotCov NVarCov dbSNPPopFreq COSMIC_Gene_Freq COSMIC_Site_Freq dbSNP_AF Algorithm ANGPTL7 10218 hgsc.bcm.edu hg19 1 11249872 11249872 + Missense_Mutation SNP T T C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . ANGPTL7 NM_021146 exon1 c.T236C p.M79T TGGTCATGCAGGT . 178.0 10.0 187.0 0.0 . 23 . . Atlas-SNP RIMKLA 284716 hgsc.bcm.edu hg19 1 42880608 42880608 + Missense_Mutation SNP T T C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . RIMKLA NM_173642 exon5 c.T1139C p.I380T ACAACATTAACAA . 53.0 7.0 56.0 0.0 . 32 . . Atlas-SNP MAST2 23139 hgsc.bcm.edu hg19 1 46500510 46500510 + Missense_Mutation SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . MAST2 NM_015112 exon29 c.G4169A p.R1390Q TCTCACGGCCCAA . 119.0 27.0 115.0 0.0 . 136 . . Atlas-SNP MIER1 57708 hgsc.bcm.edu hg19 1 67423897 67423897 + Missense_Mutation SNP A A C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . MIER1 NM_001077700 exon5 c.A495C p.E165D TGGGGAAAATAAA . 97.0 21.0 98.0 0.0 . 86 . . Atlas-SNP COL11A1 1301 hgsc.bcm.edu hg19 1 103387110 103387110 + Silent SNP T T A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . COL11A1 NM_080629 exon48 c.A3708T p.P1236P TGGGCCTGGAGGA . 1076.0 94.0 917.0 0.0 . 972 . . Atlas-SNP FBXO28 23219 hgsc.bcm.edu hg19 1 224345064 224345064 + Missense_Mutation SNP G G A rs201209850 bycluster TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . FBXO28 NM_001136115 exon4 c.G527A p.R176H AGGACCGTCTGCA . 169.0 12.0 131.0 0.0 . 34 . G|0.999;A|0.001 Atlas-SNP FSHR 2492 hgsc.bcm.edu hg19 2 49210076 49210076 + Missense_Mutation SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . FSHR NM_000145 exon8 c.C643T p.H215Y CTCCGTGGAAAAC . 268.0 57.0 272.0 0.0 . 164 . . Atlas-SNP EIF2AK3 9451 hgsc.bcm.edu hg19 2 88857341 88857341 + Silent SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f EIF2AK3_ENST00000303236,NS,carcinoma,0,2 EIF2AK3 NM_004836 exon17 c.C3264T p.L1088L CTGTCTGAGCACT . 158.0 35.0 182.0 0.0 . 160 . . Atlas-SNP LRP1B 53353 hgsc.bcm.edu hg19 2 141526828 141526828 + Missense_Mutation SNP C C A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . LRP1B NM_018557 exon35 c.G5712T p.M1904I TATAGGCATCAAA . 105.0 27.0 107.0 0.0 . 1315 . . Atlas-SNP MYO3B 140469 hgsc.bcm.edu hg19 2 171355106 171355106 + Missense_Mutation SNP T T C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . MYO3B NM_001083615 exon26 c.T3019C p.Y1007H AGGTATTATTACT . 64.0 4.0 81.0 0.0 . 320 . . Atlas-SNP FGD5 152273 hgsc.bcm.edu hg19 3 14939057 14939057 + Missense_Mutation SNP C C A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . FGD5 NM_152536 exon5 c.C2790A p.D930E CATGGACCATGAA . 156.0 43.0 182.0 0.0 . 248 . . Atlas-SNP SCN5A 6331 hgsc.bcm.edu hg19 3 38640520 38640520 + Missense_Mutation SNP C C T novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . SCN5A NM_001160160 exon13 c.G1912A p.G638S GCCCGCCTGGCTC . 97.0 20.0 89.0 0.0 . 634 . . Atlas-SNP CCK 885 hgsc.bcm.edu hg19 3 42299622 42299622 + Missense_Mutation SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f CCK,colon,carcinoma,0,1 CCK NM_000729 exon5 c.C316T p.R106C CACTGCGACGGCC . 139.0 18.0 138.0 0.0 . 15 . . Atlas-SNP DAG1 1605 hgsc.bcm.edu hg19 3 49568955 49568955 + Missense_Mutation SNP G G T novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . DAG1 NM_001177642 exon4 c.G1011T p.R337S ATCCAGGATCGTG . 61.0 10.0 79.0 0.0 . 60 . . Atlas-SNP ITIH1 3697 hgsc.bcm.edu hg19 3 52824803 52824803 + Missense_Mutation SNP T T C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . ITIH1 NM_002215 exon20 c.T2360C p.V787A TGGTGGTGTCTGT . 108.0 14.0 108.0 0.0 . 108 . . Atlas-SNP PDZRN3 23024 hgsc.bcm.edu hg19 3 73673733 73673733 + Missense_Mutation SNP A A G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . PDZRN3 NM_015009 exon1 c.T244C p.C82R ACGCGCACTTGAT . 74.0 26.0 61.0 0.0 . 196 . . Atlas-SNP CCDC54 84692 hgsc.bcm.edu hg19 3 107097051 107097051 + Missense_Mutation SNP A A C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . CCDC54 NM_032600 exon1 c.A617C p.D206A CCACTGACCATCT . 442.0 44.0 383.0 0.0 . 56 . . Atlas-SNP POLQ 10721 hgsc.bcm.edu hg19 3 121200637 121200637 + Missense_Mutation SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . POLQ NM_199420 exon19 c.C5993T p.P1998L GAATCTGGATCTA . 155.0 39.0 146.0 0.0 . 273 . . Atlas-SNP KCNMB3 27094 hgsc.bcm.edu hg19 3 178960728 178960728 + Silent SNP A A G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . KCNMB3 NM_014407 exon4 c.T804C p.I268I CCTCATAATGCAC . 242.0 46.0 242.0 0.0 . 46 . . Atlas-SNP SENP5 205564 hgsc.bcm.edu hg19 3 196613318 196613318 + Silent SNP G G T novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . SENP5 NM_152699 exon2 c.G1266T p.V422V ATCTGTGAGTAGC . 81.0 12.0 93.0 0.0 . 68 . . Atlas-SNP WDFY3 23001 hgsc.bcm.edu hg19 4 85626603 85626603 + Missense_Mutation SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . WDFY3 NM_014991 exon54 c.C8279T p.T2760I TCATCTGTTTGTG . 168.0 34.0 140.0 0.0 . 314 . . Atlas-SNP KIAA1109 84162 hgsc.bcm.edu hg19 4 123236737 123236737 + Missense_Mutation SNP T T A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . KIAA1109 NM_015312 exon59 c.T10433A p.L3478Q CAACACTGACAGG . 152.0 27.0 153.0 0.0 . 424 . . Atlas-SNP RXFP1 59350 hgsc.bcm.edu hg19 4 159568324 159568324 + Missense_Mutation SNP C C T novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . RXFP1 NM_001253727 exon16 c.C1808T p.A603V TTGGAGCCCAGAT . 95.0 21.0 71.0 0.0 . 98 . . Atlas-SNP TLL1 7092 hgsc.bcm.edu hg19 4 167020507 167020507 + Missense_Mutation SNP C C A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . TLL1 NM_012464 exon20 c.C2735A p.P912Q ACTACCCAGGACA . 274.0 78.0 289.0 0.0 . 194 . . Atlas-SNP TNPO1 3842 hgsc.bcm.edu hg19 5 72179050 72179050 + Missense_Mutation SNP T T A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . TNPO1 NM_002270 exon11 c.T1141A p.W381R TCTGACTGGAATC . 336.0 91.0 332.0 0.0 . 90 . . Atlas-SNP PSD2 84249 hgsc.bcm.edu hg19 5 139219625 139219625 + Missense_Mutation SNP G G A rs200345805 bycluster TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f PSD2,NS,adenocarcinoma,0,1 PSD2 NM_032289 exon14 c.G1982A p.R661Q AACTGCGGTCTCA . 60.0 9.0 68.0 0.0 . 88 . G|0.999;A|0.001 Atlas-SNP PCDHGA10 56106 hgsc.bcm.edu hg19 5 140793290 140793290 + Missense_Mutation SNP C C A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . PCDHGA10 NM_032090 exon1 c.C548A p.S183Y ACTTCTCCCTAAG . 81.0 24.0 79.0 0.0 . 114 . . Atlas-SNP PCDHGB7 56099 hgsc.bcm.edu hg19 5 140799322 140799322 + Missense_Mutation SNP G G C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . PCDHGB7 NM_018927 exon1 c.G1896C p.L632F TGCTTTGGGTGAC . 102.0 17.0 91.0 0.0 . 117 . . Atlas-SNP SLC34A1 6569 hgsc.bcm.edu hg19 5 176825095 176825095 + Nonsense_Mutation SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . SLC34A1 NM_003052 exon13 c.G1728A p.W576X GACATGGGACTTC . 521.0 157.0 479.0 1.0 . 73 . . Atlas-SNP TBC1D22B 55633 hgsc.bcm.edu hg19 6 37281660 37281660 + Silent SNP G G T novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f TBC1D22B,colon,carcinoma,0,1 TBC1D22B NM_017772 exon10 c.G1158T p.R386R CAGCCGGATTGAT . 191.0 35.0 170.0 0.0 . 37 . . Atlas-SNP NCOA7 135112 hgsc.bcm.edu hg19 6 126176369 126176369 + Missense_Mutation SNP A A G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . NCOA7 NM_001199619 exon4 c.A254G p.K85R AACTAAAGAGATA . 99.0 23.0 92.0 0.0 . 92 . . Atlas-SNP OSBPL3 26031 hgsc.bcm.edu hg19 7 24870414 24870414 + Missense_Mutation SNP G G T novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . OSBPL3 NM_015550 exon16 c.C1857A p.D619E GCCCTTGTCCTCC . 140.0 34.0 120.0 0.0 . 100 . . Atlas-SNP POR 5447 hgsc.bcm.edu hg19 7 75583458 75583458 + Missense_Mutation SNP A A G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . POR NM_000941 exon2 c.A148G p.K50E AGAAAGAAAAAAG . 173.0 12.0 123.0 0.0 . 46 . . Atlas-SNP GIGYF1 64599 hgsc.bcm.edu hg19 7 100285497 100285497 + Missense_Mutation SNP C C G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . GIGYF1 NM_022574 exon3 c.G175C p.E59Q GCAGCTCTTCCGG . 121.0 38.0 95.0 0.0 . 113 . . Atlas-SNP DOCK4 9732 hgsc.bcm.edu hg19 7 111398823 111398823 + Missense_Mutation SNP G G T novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . DOCK4 NM_014705 exon40 c.C4159A p.P1387T GAATGGGAGTCAC . 143.0 28.0 99.0 0.0 . 365 . . Atlas-SNP CPED1 79974 hgsc.bcm.edu hg19 7 120906375 120906375 + Missense_Mutation SNP G G T novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . . NM_024913 exon19 c.G2405T p.G802V TACATGGCACTAA . 160.0 19.0 116.0 0.0 . . . . Atlas-SNP AASS 10157 hgsc.bcm.edu hg19 7 121758381 121758381 + Missense_Mutation SNP C C T novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . AASS NM_005763 exon6 c.G667A p.G223R CAGTTCCTGTGAA . 91.0 18.0 49.0 0.0 . 123 . . Atlas-SNP KCNB2 9312 hgsc.bcm.edu hg19 8 73848214 73848214 + Silent SNP T T C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . KCNB2 NM_004770 exon3 c.T624C p.I208I CACCATTGCTTTG . 449.0 167.0 159.0 0.0 . 228 . . Atlas-SNP KCNB2 9312 hgsc.bcm.edu hg19 8 73848327 73848327 + Missense_Mutation SNP T T C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . KCNB2 NM_004770 exon3 c.T737C p.M246T TTACCATGGAGTA . 585.0 41.0 203.0 0.0 . 228 . . Atlas-SNP FBXO43 286151 hgsc.bcm.edu hg19 8 101146559 101146559 + Silent SNP G G T novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . FBXO43 NM_001029860 exon4 c.C1708A p.R570R GGAGCCGAGTGGC . 384.0 42.0 120.0 0.0 . 155 . . Atlas-SNP SLC30A8 169026 hgsc.bcm.edu hg19 8 118159313 118159313 + Silent SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . SLC30A8 NM_173851 exon2 c.G192A p.A64A GGGGGCGAATGAG . 488.0 97.0 172.0 0.0 . 102 . . Atlas-SNP AP2A2 161 hgsc.bcm.edu hg19 11 1000560 1000560 + Silent SNP C C T rs376836623 TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . AP2A2 NM_001242837 exon15 c.C2088T p.V696V TGTGGTCGCGCCT . 26.0 8.0 38.0 0.0 . 50 . . Atlas-SNP TUB 7275 hgsc.bcm.edu hg19 11 8118839 8118839 + Missense_Mutation SNP T T G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . TUB NM_003320 exon8 c.T917G p.L306R AGGATCTTGAGGA . 203.0 21.0 179.0 0.0 . 71 . . Atlas-SNP ARHGEF17 9828 hgsc.bcm.edu hg19 11 73076531 73076531 + Missense_Mutation SNP G G T rs141322412 bycluster;byfrequency;alternate_allele TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . ARHGEF17 NM_014786 exon19 c.G5647T p.V1883L GCCCACGTGTGTC . 93.0 22.0 100.0 0.0 . 117 . G|0.999;A|0.001 Atlas-SNP BACE1 23621 hgsc.bcm.edu hg19 11 117162462 117162462 + Missense_Mutation SNP T T G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . BACE1 NM_012104 exon6 c.A908C p.E303A GCAGCTTCAAACA . 127.0 12.0 128.0 0.0 . 33 . . Atlas-SNP DNAH10 196385 hgsc.bcm.edu hg19 12 124268707 124268707 + Missense_Mutation SNP G G C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . DNAH10 NM_207437 exon8 c.G1030C p.V344L TCCACCGTGGAGC . 131.0 38.0 91.0 0.0 . 888 . . Atlas-SNP DIS3 22894 hgsc.bcm.edu hg19 13 73346861 73346861 + Silent SNP C C A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . DIS3 NM_014953 exon9 c.G1356T p.L452L CTTTGGCAGAAAA . 490.0 172.0 395.0 1.0 . 103 . . Atlas-SNP INSM2 84684 hgsc.bcm.edu hg19 14 36005072 36005072 + Silent SNP A A G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . INSM2 NM_032594 exon1 c.A1614G p.P538P CTCTCCAGGGCTG . 130.0 38.0 102.0 0.0 . 39 . . Atlas-SNP SNAPC1 6617 hgsc.bcm.edu hg19 14 62248976 62248976 + Silent SNP A A G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . SNAPC1 NM_003082 exon8 c.A837G p.S279S CAAATCAAGAAGG . 136.0 54.0 105.0 0.0 . 32 . . Atlas-SNP TECPR2 9895 hgsc.bcm.edu hg19 14 102916924 102916924 + Missense_Mutation SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . TECPR2 NM_001172631 exon15 c.G3344A p.R1115H TTCCCCGTGGGAC . 107.0 10.0 97.0 0.0 . 114 . . Atlas-SNP HERC2 8924 hgsc.bcm.edu hg19 15 28437148 28437148 + Missense_Mutation SNP C C A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . HERC2 NM_004667 exon53 c.G8410T p.G2804C CGCTGCCGTCAAT . 70.0 12.0 76.0 0.0 . 501 . . Atlas-SNP FAM98B 283742 hgsc.bcm.edu hg19 15 38773609 38773609 + Silent SNP T T A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . FAM98B NM_001042429 exon7 c.T846A p.I282I GATCATTAGGACA . 191.0 38.0 188.0 0.0 . 53 . . Atlas-SNP SEC14L5 9717 hgsc.bcm.edu hg19 16 5050723 5050723 + Silent SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . SEC14L5 NM_014692 exon9 c.G1038A p.G346G CGTGGGGGAGGAG . 101.0 19.0 112.0 0.0 . 79 . . Atlas-SNP KIAA0430 9665 hgsc.bcm.edu hg19 16 15706458 15706458 + Missense_Mutation SNP A A G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . KIAA0430 NM_001184998 exon17 c.T3430C p.S1144P GCTTGGAGTATCC . 116.0 29.0 102.0 0.0 . 154 . . Atlas-SNP MTSS1L 92154 hgsc.bcm.edu hg19 16 70710812 70710812 + Missense_Mutation SNP A A C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . MTSS1L NM_138383 exon10 c.T802G p.S268A AGCTGGAGCTGCT . 103.0 24.0 109.0 0.0 . 22 . . Atlas-SNP PRPF8 10594 hgsc.bcm.edu hg19 17 1584925 1584925 + Missense_Mutation SNP A A C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . PRPF8 NM_006445 exon6 c.T713G p.L238R CGGTAGAGAGTCG . 137.0 33.0 158.0 0.0 . 169 . . Atlas-SNP TEKT3 64518 hgsc.bcm.edu hg19 17 15234544 15234544 + Missense_Mutation SNP A A T novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . TEKT3 NM_031898 exon3 c.T359A p.L120Q ACTCTTAGTTTCT . 159.0 44.0 170.0 0.0 . 64 . . Atlas-SNP RNF112 7732 hgsc.bcm.edu hg19 17 19319264 19319264 + Missense_Mutation SNP C C T novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . RNF112 NM_007148 exon14 c.C1672T p.L558F GCCGGGCTCATGG . 38.0 10.0 39.0 0.0 . 37 . . Atlas-SNP IKZF3 22806 hgsc.bcm.edu hg19 17 37922198 37922198 + Missense_Mutation SNP C C T rs149299224 bycluster TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . IKZF3 NM_012481 exon8 c.G1375A p.V459I AGAGGACGCGGCA . 123.0 19.0 113.0 0.0 . 79 . C|1.000;T|0.000 Atlas-SNP SLC39A11 201266 hgsc.bcm.edu hg19 17 70845832 70845832 + Missense_Mutation SNP C C T rs373163649 TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . SLC39A11 NM_001159770 exon6 c.G563A p.G188D CTGCTGCCGCCGG . 62.0 14.0 74.0 0.0 . 32 . . Atlas-SNP COG1 9382 hgsc.bcm.edu hg19 17 71202364 71202364 + Missense_Mutation SNP T T G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . COG1 NM_018714 exon11 c.T2582G p.L861R CACACCTCAACAG . 95.0 23.0 88.0 0.0 . 46 . . Atlas-SNP ME2 4200 hgsc.bcm.edu hg19 18 48444552 48444552 + Missense_Mutation SNP A A G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . ME2 NM_001168335 exon7 c.A703G p.I235V GACCTGATTGATG . 351.0 29.0 351.0 0.0 . 49 . . Atlas-SNP DCC 1630 hgsc.bcm.edu hg19 18 50923690 50923690 + Missense_Mutation SNP A A G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . DCC NM_005215 exon18 c.A2701G p.T901A GACACAACATCTC . 133.0 13.0 122.0 0.0 . 360 . . Atlas-SNP ZNF57 126295 hgsc.bcm.edu hg19 19 2917323 2917323 + Missense_Mutation SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . ZNF57 NM_173480 exon4 c.G704A p.G235E TTAATGGGTTCGC . 129.0 28.0 109.0 0.0 . 57 . . Atlas-SNP NRTN 4902 hgsc.bcm.edu hg19 19 5827964 5827964 + Missense_Mutation SNP T T C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . NRTN NM_004558 exon2 c.T374C p.V125A AGACGGTGCTGTT . 35.0 8.0 24.0 0.0 . 4 . . Atlas-SNP FARSA 2193 hgsc.bcm.edu hg19 19 13039211 13039211 + Silent SNP G G T novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . FARSA NM_004461 exon7 c.C786A p.L262L CTGGAAGAGGGCG . 117.0 21.0 133.0 0.0 . 46 . . Atlas-SNP CEACAM7 1087 hgsc.bcm.edu hg19 19 42192077 42192077 + Silent SNP G G T novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . CEACAM7 NM_006890 exon1 c.C18A p.A6A TGGACAGGCTGAA . 73.0 19.0 73.0 0.0 . 33 . . Atlas-SNP CD79A 973 hgsc.bcm.edu hg19 19 42383663 42383663 + Silent SNP A A G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 A A . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . CD79A NM_001783 exon3 c.A438G p.T146T CATCACAGCCGAG . 46.0 16.0 52.0 0.0 . 25 . . Atlas-SNP ZNF772 400720 hgsc.bcm.edu hg19 19 57985762 57985762 + Missense_Mutation SNP T T C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . ZNF772 NM_001024596 exon5 c.A350G p.E117G GGTATCTCTTCAT . 25.0 6.0 26.0 0.0 . 42 . . Atlas-SNP CYYR1 116159 hgsc.bcm.edu hg19 21 27840930 27840930 + Missense_Mutation SNP C C A rs371412046 alternate_allele TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 C C . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . CYYR1 NM_052954 exon4 c.G355T p.D119Y CGTGGTCGTGACC . 53.0 11.0 79.0 0.0 . 38 . . Atlas-SNP FOXRED2 80020 hgsc.bcm.edu hg19 22 36900813 36900813 + Silent SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . FOXRED2 NM_001102371 exon3 c.C528T p.S176S GAGGACGCTGCAG . 116.0 29.0 105.0 0.0 . 48 . . Atlas-SNP SHANK3 85358 hgsc.bcm.edu hg19 22 51117297 51117297 + Silent SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . SHANK3 NM_033517 exon5 c.G549A p.G183G CGATGGGCTCACT . 93.0 17.0 97.0 0.0 . 96 . . Atlas-SNP PRKX 5613 hgsc.bcm.edu hg19 X 3573254 3573254 + Silent SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . PRKX NM_005044 exon3 c.C535T p.L179L CCAGCAGGATGTT . 118.0 51.0 127.0 0.0 . 29 . . Atlas-SNP ND5 0 hgsc.bcm.edu hg19 MT 12818 12818 + Missense_Mutation SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . . ENST00000361567 exon1 c.G482A p.R161Q ACGCCCGAGCAGA . 71.0 15.0 25.0 0.0 . . . . Atlas-SNP ND6 0 hgsc.bcm.edu hg19 MT 14384 14384 + Missense_Mutation SNP G G A novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . . ENST00000361681 exon1 c.C290T p.A97V TCCATCGCTAACC . 109.0 6.0 44.0 0.0 . . . . Atlas-SNP TAT 6898 hgsc.bcm.edu hg19 16 71604656 71604657 + Frame_Shift_Ins INS - - G novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 - - . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . TAT NM_000353 exon8 c.838_839insC p.K280fs . . 124.0 25.0 159.0 0.0 . 80 . . Atlas-Indel,Pindel PPAP2C 8612 hgsc.bcm.edu hg19 19 287737 287737 + Frame_Shift_Del DEL T T - novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 T T . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . PPAP2C NM_177543 exon3 c.283delG p.A95fs . . 81.0 11.0 75.0 0.0 . 38 . . Atlas-INDEL EHBP1L1 254102 hgsc.bcm.edu hg19 11 65350076 65350076 + Frame_Shift_Del DEL G G - novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . EHBP1L1 NM_001099409 exon9 c.1932delA p.P644fs . . 118.0 29.0 140.0 0.0 . 64 . . Atlas-Indel,Pindel HRG 3273 hgsc.bcm.edu hg19 3 186386775 186386776 + Frame_Shift_Ins INS - - C novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 - - . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . HRG NM_000412 exon2 c.235_236insC p.S79fs . . 103.0 15.0 89.0 0.0 . 81 . . Atlas-Indel,Pindel MRPL22 29093 hgsc.bcm.edu hg19 5 154320807 154320807 + Frame_Shift_Del DEL G G - novel TCGA-2Y-A9GW-01A-11D-A382-10 TCGA-2Y-A9GW-10A-01D-A385-10 G G . . . . Unknown Untested Somatic PhaseI WXS none . . Illumina HiSeq 8a09bb43-1c6d-4d41-901b-0dac97a29aee c1a9c723-e7ce-4a26-a984-08403614980f . MRPL22 NM_014180 exon2 c.58delC p.R20fs . . 170.0 42.0 130.0 0.0 . 18 . . Atlas-Indel,Pindel