Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	dbSNP_AF	Algorithm
GPN2	54707	hgsc.bcm.edu	hg19	1	27210697	27210697	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	GPN2	NM_018066	exon4	c.G814T	p.E272X	TGGCTTCCAAGCT	.	127.0	17.0	137.0	0.0	.	18	.	.	Atlas-SNP
IL12RB2	3595	hgsc.bcm.edu	hg19	1	67795378	67795378	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	IL12RB2	NM_001559	exon6	c.G773C	p.R258T	GACTCAGATATCG	.	142.0	23.0	150.0	0.0	.	94	.	.	Atlas-SNP
PDE4DIP	9659	hgsc.bcm.edu	hg19	1	144859947	144859947	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	PDE4DIP	NM_014644	exon38	c.A6137G	p.H2046R	ACCAGGTGGCTCA	.	305.0	29.0	242.0	0.0	.	817	.	.	Atlas-SNP
RASSF5	83593	hgsc.bcm.edu	hg19	1	206730943	206730943	+	Silent	SNP	G	G	T	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	RASSF5	NM_182665	exon1	c.G42T	p.L14L	CAGCCTGGACGAG	.	122.0	18.0	97.0	0.0	.	54	.	.	Atlas-SNP
BIRC6	57448	hgsc.bcm.edu	hg19	2	32692803	32692803	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	BIRC6	NM_016252	exon27	c.T5567C	p.M1856T	GATTCATGAAGGT	.	123.0	22.0	129.0	0.0	.	838	.	.	Atlas-SNP
LONRF2	164832	hgsc.bcm.edu	hg19	2	100906810	100906810	+	Silent	SNP	G	G	A	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	LONRF2	NM_198461	exon10	c.C1830T	p.D610D	AATCGCGTCTACA	.	165.0	29.0	170.0	0.0	.	62	.	.	Atlas-SNP
FARSB	10056	hgsc.bcm.edu	hg19	2	223505623	223505623	+	Silent	SNP	T	T	A	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	FARSB	NM_005687	exon4	c.A297T	p.V99V	AGGCATTACCCGT	.	329.0	54.0	633.0	0.0	.	49	.	.	Atlas-SNP
CADPS	8618	hgsc.bcm.edu	hg19	3	62484884	62484884	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	CADPS_ENST00000383710,NS,haematopoietic_neoplasm,0,4	CADPS	NM_183394	exon18	c.G2710A	p.E904K	CTAGTTCAGCAAG	.	294.0	75.0	272.0	1.0	.	387	.	.	Atlas-SNP
RAPGEF2	9693	hgsc.bcm.edu	hg19	4	160225597	160225597	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	RAPGEF2	NM_014247	exon2	c.G164C	p.G55A	ATTCTGGGAGCAG	.	389.0	51.0	423.0	0.0	.	171	.	.	Atlas-SNP
FOXK1	221937	hgsc.bcm.edu	hg19	7	4799104	4799104	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	FOXK1	NM_001037165	exon7	c.T1574G	p.V525G	CCATGGTCAGGGT	.	74.0	10.0	29.0	0.0	.	64	.	.	Atlas-SNP
SUPV3L1	6832	hgsc.bcm.edu	hg19	10	70951452	70951452	+	Silent	SNP	A	A	G	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	SUPV3L1	NM_003171	exon6	c.A783G	p.T261T	TGTGACAGTTCAG	.	336.0	53.0	451.0	0.0	.	61	.	.	Atlas-SNP
CEP290	80184	hgsc.bcm.edu	hg19	12	88508195	88508195	+	Splice_Site	SNP	A	A	C	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	CEP290	NM_025114	exon21	c.2052+2T>G	.	TAACTTACATTAA	.	109.0	31.0	201.0	0.0	.	195	.	.	Atlas-SNP
BRCA2	675	hgsc.bcm.edu	hg19	13	32912486	32912486	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	BRCA2	NM_000059	exon11	c.C3994T	p.H1332Y	AATTCTCATAACT	.	124.0	26.0	160.0	0.0	.	812	.	.	Atlas-SNP
IPO5	3843	hgsc.bcm.edu	hg19	13	98670928	98670928	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	IPO5	NM_002271	exon26	c.G2860A	p.G954S	CAGTACGGTGGAG	.	184.0	38.0	151.0	0.0	.	90	.	.	Atlas-SNP
ZNF267	10308	hgsc.bcm.edu	hg19	16	31925948	31925948	+	Silent	SNP	T	T	C	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	ZNF267	NM_003414	exon4	c.T378C	p.N126N	GCACAATGGATGT	.	148.0	28.0	158.0	0.0	.	94	.	.	Atlas-SNP
SKAP1	8631	hgsc.bcm.edu	hg19	17	46262096	46262096	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	SKAP1	NM_003726	exon7	c.C556T	p.R186C	AGCTGCGCCTATC	.	128.0	26.0	138.0	0.0	.	41	.	.	Atlas-SNP
GPR142	350383	hgsc.bcm.edu	hg19	17	72367888	72367888	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	GPR142,NS,carcinoma,0,1	GPR142	NM_181790	exon4	c.G538A	p.A180T	GCAGTGGCCCTGG	.	47.0	10.0	44.0	0.0	.	74	.	.	Atlas-SNP
FBF1	85302	hgsc.bcm.edu	hg19	17	73918105	73918105	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	FBF1	NM_001080542	exon14	c.G1402C	p.G468R	CAAGCCCTTGTGT	.	108.0	20.0	120.0	0.0	.	48	.	.	Atlas-SNP
POLD1	5424	hgsc.bcm.edu	hg19	19	50912834	50912834	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	POLD1_ENST00000440232,colon,carcinoma,0,2	POLD1	NM_002691	exon17	c.C2065T	p.R689W	GATGGACGGCAGC	.	154.0	27.0	138.0	0.0	.	174	.	.	Atlas-SNP
XKR7	343702	hgsc.bcm.edu	hg19	20	30585125	30585125	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	XKR7	NM_001011718	exon3	c.G1605A	p.W535X	GGCCTGGGATGCT	.	22.0	7.0	37.0	0.0	.	62	.	.	Atlas-SNP
TDRD9	122402	hgsc.bcm.edu	hg19	14	104473004	104473005	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-DD-A1EC-01A-21D-A12Z-10	TCGA-DD-A1EC-11A-11D-A12Z-10	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	4b9bbd66-c9e2-4d37-ba06-3137ad936c06	f5663abe-78b9-4a8e-925d-e5a08d29c2ff	.	TDRD9	NM_153046	exon17	c.1901_1902insT	p.N634fs	.	.	235.0	14.0	299.0	0.0	.	175	.	.	Pindel