Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	COSMIC_Gene_Freq	COSMIC_Site_Freq	dbSNP_AF	Algorithm
UBXN10	127733	hgsc.bcm.edu	hg19	1	20517668	20517668	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	UBXN10	NM_152376	exon2	c.C614T	p.S205L	TTAGATCACCAAC	.	61.0	20.0	66.0	0.0	.	29	.	.	Atlas-SNP
CEP85	64793	hgsc.bcm.edu	hg19	1	26603246	26603246	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	CEP85	NM_022778	exon13	c.T2123A	p.I708N	TGGGCATTCACTG	.	105.0	29.0	133.0	0.0	.	61	.	.	Atlas-SNP
KIAA1324	57535	hgsc.bcm.edu	hg19	1	109734359	109734359	+	Silent	SNP	T	T	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	KIAA1324	NM_020775	exon13	c.T1557C	p.S519S	GAATTCTAGGACC	.	83.0	15.0	88.0	0.0	.	77	.	.	Atlas-SNP
RFWD2	64326	hgsc.bcm.edu	hg19	1	175957534	175957534	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	RFWD2	NM_022457	exon17	c.A1862T	p.Q621L	TTTAGCTGACTGT	.	100.0	28.0	116.0	0.0	.	67	.	.	Atlas-SNP
PTPN14	5784	hgsc.bcm.edu	hg19	1	214557934	214557934	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	PTPN14	NM_005401	exon13	c.C1264T	p.R422W	CGGCCCGCATGAT	.	100.0	30.0	103.0	0.0	.	168	.	.	Atlas-SNP
MYT1L	23040	hgsc.bcm.edu	hg19	2	1895870	1895870	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	MYT1L	NM_015025	exon15	c.C2216T	p.T739M	CAGCGCGTGGACA	.	66.0	21.0	65.0	0.0	.	241	.	.	Atlas-SNP
LTBP1	4052	hgsc.bcm.edu	hg19	2	33518280	33518280	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	LTBP1	NM_206943	exon20	c.C3166T	p.L1056F	TCCAACCTTGAAG	.	356.0	98.0	414.0	1.0	.	317	.	.	Atlas-SNP
TTN	7273	hgsc.bcm.edu	hg19	2	179571276	179571276	+	Silent	SNP	G	G	A	rs377442695		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	TTN	NM_001267550	exon102	c.C29325T	p.N9775N	ATGTTCGTTAAAT	.	113.0	20.0	119.0	0.0	.	18412	.	.	Atlas-SNP
CELSR3	1951	hgsc.bcm.edu	hg19	3	48699034	48699034	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	CELSR3	NM_001407	exon1	c.T1034C	p.L345P	ACGCGTAGCACCG	.	54.0	20.0	80.0	0.0	.	237	.	.	Atlas-SNP
DCUN1D4	23142	hgsc.bcm.edu	hg19	4	52757946	52757946	+	Silent	SNP	T	T	G	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	DCUN1D4	NM_015115	exon7	c.T435G	p.A145A	CCTAGCTTGGAAA	.	75.0	15.0	60.0	0.0	.	26	.	.	Atlas-SNP
C4orf26	152816	hgsc.bcm.edu	hg19	4	76481309	76481309	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	C4orf26	NM_001257072	exon1	c.G17C	p.C6S	GACACTGCTTCTC	.	107.0	24.0	116.0	0.0	.	24	.	.	Atlas-SNP
HPSE	10855	hgsc.bcm.edu	hg19	4	84216608	84216608	+	Silent	SNP	G	G	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	HPSE	NM_001098540	exon12	c.C1521T	p.T507T	TGGCAAGGTTTGA	.	135.0	35.0	149.0	0.0	.	55	.	.	Atlas-SNP
MTNR1A	4543	hgsc.bcm.edu	hg19	4	187455203	187455203	+	Silent	SNP	T	T	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	MTNR1A	NM_005958	exon2	c.A693G	p.P231P	GTCCTGTGGTTTC	.	137.0	32.0	164.0	0.0	.	46	.	.	Atlas-SNP
IL7R	3575	hgsc.bcm.edu	hg19	5	35867558	35867558	+	Silent	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	IL7R,NS,carcinoma,0,1	IL7R	NM_002185	exon3	c.C372T	p.T124T	CCTAACCACTATA	.	54.0	9.0	57.0	0.0	.	200	.	.	Atlas-SNP
FST	10468	hgsc.bcm.edu	hg19	5	52776663	52776663	+	Silent	SNP	G	G	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	FST,colon,carcinoma,0,1	FST	NM_013409	exon1	c.G42C	p.L14L	CCTCCTGCTGCTG	.	63.0	3.0	85.0	0.0	.	42	.	.	Atlas-SNP
PDE4D	5144	hgsc.bcm.edu	hg19	5	59189173	59189173	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	PDE4D	NM_001104631	exon1	c.G277A	p.G93S	AGCGGCCGCGGGC	.	272.0	67.0	362.0	0.0	.	345	.	.	Atlas-SNP
PCDHA7	56141	hgsc.bcm.edu	hg19	5	140215179	140215179	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	PCDHA7	NM_031852	exon1	c.A1211G	p.Y404C	AGAATTACTATTC	.	115.0	23.0	152.0	0.0	.	367	.	.	Atlas-SNP
PCDHA9	9752	hgsc.bcm.edu	hg19	5	140229434	140229434	+	Missense_Mutation	SNP	G	G	A	rs145248721		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	PCDHA9	NM_031857	exon1	c.G1354A	p.A452T	GACAACGCACCAG	.	212.0	60.0	207.0	0.0	.	373	.	G|1.000;A|0.000	Atlas-SNP
NT5E	4907	hgsc.bcm.edu	hg19	6	86176881	86176881	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	NT5E	NM_001204813	exon2	c.G443A	p.G148E	CAAAGGGGCCACT	.	113.0	31.0	159.0	0.0	.	56	.	.	Atlas-SNP
AKAP12	9590	hgsc.bcm.edu	hg19	6	151671011	151671011	+	Silent	SNP	C	C	T	rs370245999		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	AKAP12	NM_005100	exon4	c.C1485T	p.G495G	CGAAGGCGTTGTG	.	93.0	23.0	85.0	0.0	.	170	.	.	Atlas-SNP
AEBP1	165	hgsc.bcm.edu	hg19	7	44149650	44149650	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	AEBP1	NM_001129	exon10	c.A1187T	p.E396V	GTATTGAGGACAA	.	81.0	22.0	90.0	0.0	.	102	.	.	Atlas-SNP
DUS4L	11062	hgsc.bcm.edu	hg19	7	107217956	107217956	+	Nonsense_Mutation	SNP	C	C	G	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	DUS4L	NM_001270419	exon8	c.C905G	p.S302X	CTCTGTCAAGCAC	.	103.0	25.0	118.0	0.0	.	27	.	.	Atlas-SNP
CTTNBP2	83992	hgsc.bcm.edu	hg19	7	117431557	117431557	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	CTTNBP2	NM_033427	exon4	c.G1693T	p.V565F	TAATAACCTTGAG	.	177.0	43.0	188.0	0.0	.	200	.	.	Atlas-SNP
IMPDH1	3614	hgsc.bcm.edu	hg19	7	128034577	128034577	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	IMPDH1	NM_000883	exon15	c.C1627T	p.P543S	GGTAGGGCACGAA	.	45.0	15.0	40.0	0.0	.	38	.	.	Atlas-SNP
OR9A2	135924	hgsc.bcm.edu	hg19	7	142723576	142723576	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	OR9A2	NM_001001658	exon1	c.C644T	p.T215I	ATGTAGGTGTAGG	.	68.0	11.0	72.0	0.0	.	52	.	.	Atlas-SNP
C8orf74	203076	hgsc.bcm.edu	hg19	8	10557811	10557811	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	C8orf74	NM_001040032	exon4	c.C715T	p.R239C	CTGCAGCGCCAGA	.	57.0	27.0	84.0	0.0	.	28	.	.	Atlas-SNP
PLEKHA2	59339	hgsc.bcm.edu	hg19	8	38793565	38793565	+	Silent	SNP	G	G	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	PLEKHA2	NM_021623	exon3	c.G195C	p.S65S	CATCTCGAAGGTA	.	33.0	8.0	56.0	0.0	.	22	.	.	Atlas-SNP
MTSS1	9788	hgsc.bcm.edu	hg19	8	125568510	125568510	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	MTSS1	NM_014751	exon12	c.A1367G	p.Q456R	GGTCTCTGAGCCT	.	126.0	21.0	73.0	0.0	.	79	.	.	Atlas-SNP
ADCY8	114	hgsc.bcm.edu	hg19	8	132052016	132052016	+	Silent	SNP	C	C	T	rs80098122		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	ADCY8	NM_001115	exon1	c.G564A	p.L188L	CACGTCCAGCACG	.	182.0	22.0	116.0	0.0	.	291	.	.	Atlas-SNP
NPR2	4882	hgsc.bcm.edu	hg19	9	35806115	35806115	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	NPR2	NM_003995	exon15	c.G2257T	p.D753Y	AGCATTGACCGGA	.	49.0	15.0	63.0	0.0	.	162	.	.	Atlas-SNP
FAM108B1	51104	hgsc.bcm.edu	hg19	9	74485146	74485146	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	FAM108B1	NM_016014	exon3	c.A500G	p.Y167C	TGGCCATATATAA	.	71.0	19.0	97.0	0.0	.	24	.	.	Atlas-SNP
GAPVD1	26130	hgsc.bcm.edu	hg19	9	128074846	128074846	+	Silent	SNP	A	A	G	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	GAPVD1	NM_015635	exon7	c.A1557G	p.L519L	TTCCTTAGGTACA	.	80.0	19.0	102.0	0.0	.	124	.	.	Atlas-SNP
FBXO18	84893	hgsc.bcm.edu	hg19	10	5952981	5952981	+	Silent	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	FBXO18	NM_032807	exon7	c.C1254T	p.C418C	CTTCTGCCTCCGG	.	39.0	11.0	46.0	0.0	.	108	.	.	Atlas-SNP
SGPL1	8879	hgsc.bcm.edu	hg19	10	72636985	72636985	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	SGPL1	NM_003901	exon15	c.G1600A	p.D534N	ACTGTTGACAGGA	.	59.0	21.0	82.0	0.0	.	37	.	.	Atlas-SNP
KLLN	100144748	hgsc.bcm.edu	hg19	10	89621709	89621709	+	Silent	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	KLLN	NM_001126049	exon1	c.G536A	p.X179X	AGGTCTCAGTCCT	.	88.0	25.0	114.0	0.0	.	10	.	.	Atlas-SNP
TNKS2	80351	hgsc.bcm.edu	hg19	10	93579739	93579739	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	TNKS2	NM_025235	exon6	c.T677C	p.I226T	TAAAGATTGTACA	.	365.0	93.0	381.0	0.0	.	103	.	.	Atlas-SNP
PDZD8	118987	hgsc.bcm.edu	hg19	10	119044292	119044292	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	PDZD8	NM_173791	exon5	c.T1952G	p.F651C	GCTAAAAATTGCT	.	86.0	26.0	109.0	0.0	.	85	.	.	Atlas-SNP
OR5L1	219437	hgsc.bcm.edu	hg19	11	55579074	55579074	+	Silent	SNP	C	C	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	OR5L1	NM_001004738	exon1	c.C132A	p.G44G	CCTGGGCATGATT	.	78.0	17.0	61.0	0.0	.	145	.	.	Atlas-SNP
LTBP3	4054	hgsc.bcm.edu	hg19	11	65314273	65314273	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	LTBP3,NS,carcinoma,0,1	LTBP3	NM_001130144	exon15	c.T2226G	p.C742W	ACCGCGACAGGCC	.	18.0	6.0	15.0	0.0	.	55	.	.	Atlas-SNP
HTR3B	9177	hgsc.bcm.edu	hg19	11	113775680	113775680	+	Silent	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	HTR3B	NM_006028	exon1	c.C25T	p.L9L	GCTCCCCTGTGGG	.	60.0	16.0	73.0	0.0	.	50	.	.	Atlas-SNP
ARNTL2	56938	hgsc.bcm.edu	hg19	12	27521282	27521282	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	ARNTL2	NM_001248003	exon2	c.C152G	p.S51C	TGGGGTCTTTCAG	.	663.0	549.0	125.0	0.0	.	54	.	.	Atlas-SNP
SMCO2	0	hgsc.bcm.edu	hg19	12	27648715	27648715	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	.	NM_001145010	exon8	c.G760C	p.E254Q	ACGGAAGAGATGG	.	398.0	335.0	65.0	0.0	.	.	.	.	Atlas-SNP
KIAA1551	55196	hgsc.bcm.edu	hg19	12	32138704	32138704	+	Silent	SNP	G	G	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	.	NM_018169	exon4	c.G4815A	p.R1605R	ACCCAGGAAGCTT	.	1406.0	1059.0	327.0	1.0	.	.	.	.	Atlas-SNP
ACSS3	79611	hgsc.bcm.edu	hg19	12	81503455	81503455	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	ACSS3,NS,malignant_melanoma,0,1	ACSS3	NM_024560	exon2	c.C428T	p.T143I	AAGCAACCTTTAC	.	303.0	111.0	214.0	1.0	.	118	.	.	Atlas-SNP
SLC6A15	55117	hgsc.bcm.edu	hg19	12	85285776	85285776	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	SLC6A15	NM_018057	exon2	c.G124A	p.D42N	GGCCATCAACAAT	.	115.0	42.0	100.0	0.0	.	159	.	.	Atlas-SNP
TMEM132B	114795	hgsc.bcm.edu	hg19	12	125834194	125834194	+	Silent	SNP	T	T	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	TMEM132B,NS,carcinoma,0,1	TMEM132B	NM_052907	exon2	c.T249C	p.I83I	CCCTATTATCAAT	.	121.0	30.0	123.0	0.0	.	207	.	.	Atlas-SNP
BCL11B	64919	hgsc.bcm.edu	hg19	14	99641663	99641663	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	BCL11B	NM_138576	exon4	c.G1510T	p.E504X	CCAGCTCGCTGGT	.	19.0	4.0	30.0	0.0	.	108	.	.	Atlas-SNP
FES	2242	hgsc.bcm.edu	hg19	15	91430578	91430578	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	FES	NM_001143784	exon4	c.C646T	p.H216Y	GACCTGCACGAGG	.	57.0	19.0	92.0	0.0	.	102	.	.	Atlas-SNP
TRAF7	84231	hgsc.bcm.edu	hg19	16	2215890	2215890	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	TRAF7	NM_032271	exon3	c.A92C	p.E31A	GAATGGAAACGAC	.	43.0	10.0	72.0	0.0	.	158	.	.	Atlas-SNP
NLRC3	197358	hgsc.bcm.edu	hg19	16	3613511	3613511	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	NLRC3	NM_178844	exon5	c.T1427A	p.F476Y	AGGTCGAAGATGG	.	79.0	19.0	93.0	0.0	.	103	.	.	Atlas-SNP
SLX4	84464	hgsc.bcm.edu	hg19	16	3641076	3641076	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	SLX4	NM_032444	exon12	c.T2563G	p.Y855D	ATTCATAAATTTC	.	55.0	10.0	71.0	0.0	.	173	.	.	Atlas-SNP
CBLN1	869	hgsc.bcm.edu	hg19	16	49315146	49315146	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	CBLN1	NM_004352	exon1	c.G231C	p.M77I	ATTACTCATCTCG	.	77.0	16.0	84.0	0.0	.	26	.	.	Atlas-SNP
SMPD3	55512	hgsc.bcm.edu	hg19	16	68405459	68405459	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	SMPD3	NM_018667	exon3	c.C626T	p.S209F	TCCACAGAGGCTG	.	23.0	7.0	13.0	0.0	.	52	.	.	Atlas-SNP
AARS	16	hgsc.bcm.edu	hg19	16	70293021	70293021	+	Silent	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	AARS	NM_001605	exon14	c.G1854A	p.V618V	CCCAAGCACTGAG	.	63.0	14.0	95.0	0.0	.	62	.	.	Atlas-SNP
GAN	8139	hgsc.bcm.edu	hg19	16	81385202	81385202	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	GAN	NM_022041	exon2	c.A182G	p.Y61C	TAAACTATAATCC	.	58.0	12.0	60.0	0.0	.	59	.	.	Atlas-SNP
RPL13	6137	hgsc.bcm.edu	hg19	16	89628070	89628070	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	RPL13	NM_000977	exon4	c.C331T	p.Q111X	TCCCTGCAGGCCA	.	160.0	42.0	209.0	0.0	.	11	.	.	Atlas-SNP
TP53	7157	hgsc.bcm.edu	hg19	17	7578463	7578463	+	Missense_Mutation	SNP	C	C	G	rs371524413	alternate_allele	TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	TP53_ENST00000545858,right_upper_lobe,carcinoma,0,5	TP53	NM_000546	exon5	c.G467C	p.R156P	CGGACGCGGGTGC	.	80.0	29.0	139.0	0.0	.	33396	.	.	Atlas-SNP
SLFN12L	100506736	hgsc.bcm.edu	hg19	17	33802437	33802437	+	Silent	SNP	T	T	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	SLFN12L	NM_001195790	exon4	c.A1272G	p.G424G	CTTAAGTCCTTCA	.	55.0	14.0	88.0	0.0	.	140	.	.	Atlas-SNP
GPR179	440435	hgsc.bcm.edu	hg19	17	36482914	36482914	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	GPR179	NM_001004334	exon11	c.G6538A	p.E2180K	CTGCCTCCTGCTC	.	38.0	6.0	63.0	0.0	.	170	.	.	Atlas-SNP
WDR18	57418	hgsc.bcm.edu	hg19	19	992023	992023	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	WDR18	NM_024100	exon8	c.C1000G	p.L334V	CCCAGCCTGCCGC	.	58.0	17.0	63.0	0.0	.	20	.	.	Atlas-SNP
ZNF728	388523	hgsc.bcm.edu	hg19	19	23159372	23159372	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	T	T	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	.	NM_001267716	exon4	c.A767G	p.Y256C	CATTTGTAATGTT	.	30.0	9.0	28.0	0.0	.	.	.	.	Atlas-SNP
ATP4A	495	hgsc.bcm.edu	hg19	19	36047937	36047937	+	Missense_Mutation	SNP	C	C	T	rs200791532		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	ATP4A,NS,carcinoma,0,1	ATP4A	NM_000704	exon12	c.G1747A	p.D583N	CTACGTCGAAGGC	.	86.0	23.0	93.0	0.0	.	123	.	C|0.999;T|0.001	Atlas-SNP
IZUMO1	284359	hgsc.bcm.edu	hg19	19	49244274	49244274	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	IZUMO1	NM_182575	exon10	c.G944A	p.R315Q	TTCCTTCGACGAA	.	51.0	9.0	55.0	0.0	.	30	.	.	Atlas-SNP
PLCB1	23236	hgsc.bcm.edu	hg19	20	8769114	8769114	+	Silent	SNP	G	G	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	PLCB1	NM_015192	exon28	c.A3130A	p.K1044K	TTGACGGATGTCG	.	177.0	49.0	169.0	0.0	.	394	.	.	Atlas-SNP
SEC23B	10483	hgsc.bcm.edu	hg19	20	18491492	18491492	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	SEC23B	NM_032985	exon2	c.C13G	p.L5V	ACATACCTGGAGT	.	160.0	38.0	209.0	0.0	.	70	.	.	Atlas-SNP
TTC38	55020	hgsc.bcm.edu	hg19	22	46681166	46681166	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	A	A	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	TTC38	NM_017931	exon9	c.A824G	p.Y275C	CCATCTACGATAC	.	67.0	23.0	106.0	0.0	.	40	.	.	Atlas-SNP
CYTB	0	hgsc.bcm.edu	hg19	MT	15005	15005	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	G	G	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	.	ENST00000361789	exon1	c.G259A	p.A87T	AATGGCGCCTCAA	.	47.0	34.0	41.0	0.0	.	.	.	.	Atlas-SNP
HNRNPL	3191	hgsc.bcm.edu	hg19	19	39330868	39330869	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	HNRPL,right_upper_lobe,carcinoma,0,6	HNRNPL	NM_001533	exon8	c.1101_1102insC	p.P367fs	.	.	88.0	25.0	91.0	0.0	.	67	.	.	Atlas-INDEL
NAT10	55226	hgsc.bcm.edu	hg19	11	34135326	34135326	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	NAT10	NM_024662	exon5	c.435delG	p.G145fs	.	.	128.0	39.0	143.0	0.0	.	78	.	.	Atlas-INDEL
INSR	3643	hgsc.bcm.edu	hg19	19	7174745	7174746	+	Splice_Site	DEL	AA	AA	-	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	AA	AA	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	INSR	.	.	.	.	.	.	53.0	10.0	60.0	0.0	.	265	.	.	Atlas-INDEL
FREM2	341640	hgsc.bcm.edu	hg19	13	39263249	39263257	+	In_Frame_Del	DEL	GATTCAGAT	GATTCAGAT	-	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	GATTCAGAT	GATTCAGAT	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	FREM2	NM_207361	exon1	c.1767_1775del	p.589_592del	.	.	48.0	13.0	41.0	0.0	.	385	.	.	Atlas-INDEL
ALB	213	hgsc.bcm.edu	hg19	4	74274379	74274380	+	Frame_Shift_Ins	INS	-	-	AGCA	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	-	-	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	ALB	NM_000477	exon4	c.339_340insAGCA	p.D113fs	.	.	95.0	19.0	118.0	0.0	.	132	.	.	Atlas-INDEL
C8orf76	84933	hgsc.bcm.edu	hg19	8	124238821	124238821	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-K7-AAU7-01A-11D-A382-10	TCGA-K7-AAU7-10A-01D-A385-10	C	C	.	.	.	.	Unknown	Untested	Somatic	PhaseI	WXS	none	.	.	Illumina HiSeq	ad39f207-eb8e-4719-8887-cd482741dd5f	16cd1e7f-a4ad-474d-8aa1-d578f2f2db0c	.	C8orf76	NM_032847	exon5	c.868delA	p.N290fs	.	.	151.0	88.0	67.0	0.0	.	26	.	.	Atlas-INDEL